HG10017558 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017558
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	10 kDa chaperonin, mitochondrial-like
Location	Chr03: 15747761 .. 15750293 (-)
RNA-Seq Expression	HG10017558
Synteny	HG10017558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCGTTTGGTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTGCCTCCTGCCAAAACCAATTCCGGAATTTTGCTTCCTGAGAAATCCAGTAAGGTGAATCTTTCTTCCGCCTCTCCCCCATTTCGATTCCCCTTAAAACAAAATGTTAATTCGGGTGTTTGTGTATGGGAATTCGTGGGAGAATCGGCTTTCTCTTGCAATTGTGCTTTTGTTGTCGTTGTTTATTTACCGAGATTCTGGAAATTTGCGACACTGAATTCTCTCGAACGACTAGAGTCATTTTCCTTGATGGTATTCTTATGGAGTCATTTCCGTATATGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCTTTTCTTGTTTAATAGTTATTTGGTTTATGGTTTGTTGTGAAGTCGGCTTCTAGTTGGGTTTGTGAGCTCATTTAGTGGTTACCTAATTAATTTTCAATGTTAGCCTATTTAAAGAAGACTTGTAATATGATTTGAAAGTGTGAATGTTTTCATTTCCTCCTGATTTCAATGTTAGTGACTGTTCAGTGATGCGATTTATAACAAATTCTCTCTTTTTTCAGAGAGGGCATTGTAATAAAATTTAAGACCGAATGCTTAAAATAGATGTGGATGTAGCTGCTGGATTGTGTGAGTGGGATTGACCGATGCAATGTTTTCGTTTTCAGCAGAAATCTTATTTGTTTGGAAGTATTTTTCGTGGATGAGCTTTGCTGAATAGCTTTGATTTAGGGTACTTCCTTCCATCAGGATTTTCTAGATTCAGAATGATATGGCTTTTTTGTTCATGATAAGTTTAAATAGTCCATGGATTCTGGGTTGTGTTTTATTTAATCTTAATTCCCTGCATTAGAAGGACTAAATTAGCAAAACCTTTCTTCCTAAACTAGTGTGTCTGTCGTGTCCAAGGTTGTTATGAGTCTTATGACTTTCTCATGTTTCTCTTCGGGCTTCAATTTTAAAGATTTTTTGTAATGATTCAATAGGTTAGGTTCTATCATGCATAGTTCGATCTCCTTTCTCTAGTTGGGCACCTTTTTGTGGTCTTGATTTTTTATATGTTCATTTTTTCTCAATGAAAGTTCTATGAAAAAAAGGTGGTTGTGACGTTCAGCTTTGTTACACAAAATTCGTGGATCCTTTATCGAATGCCTTTTGTACTGATTTTTGTTCCTCATCTAGCTTAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTGTCACTGTAAAGGAAGGTGACACTGTCCTCCTACCAGAATATGGAGGCACTGAAGTCAAGCTTGGAGAAAGGCAGTATGTATACTTGTTCTCTTACTTTTGTTATTTATGTAACTTTTGGTCTGTTATTTGCTCAAGAATTTGGTTTTAAAGTTAACCTGGAAGTTGAAAATACCCCAATTTCTCTATATGGCCTATACTTTGGTCATTTTTAAAATTTTTGTTGCTCTTGAACTAGCATGCTGTGATGAACTTTAGGTTGTATTCCGATGTTCTCTAAATTTGTGTTGTTGGCCGCTTTACCCTGTTCTGGTCAATTCATGTTTCTCGTTTGCTACTGCATTATTAGCTGTTCCTAACTTTGTTTAGCCCTTGAAAATTAGTTTTTGATGGCTCTCATCAGCAGTTGGGTTGGTTAGGTGATTGCTTTGAGCTGGAATAGTCAGTTATAAGGATTGCCTTATTTTATTAATTCTAAACATTGTGTCAATTAACTATTTCATGAACAAAGAACAAAACGCAGAATAATGCGTTCTTCTTTGTTCTGATTTTAAATTCAACGCAAACTTGAGGCTGCTGGTGCTGGATGTGGAGACATAAGCTCAGGAACTGTAATTACTTGGGAATTTAGAATGTAATCATCTTGTACTCTTTAGAAGGTCGATTGATGTTTTTGTGTAATTCATGTTAAGTATTTGTTTTATTCCTTATTTTTGGTTTAAAATTTTTCTAGTTAATCCCTCACATTTTAAAAATTTTCAATTATACCCTTTCCTTTAGTAGATGTTACATCTTAGTACATGTAGTTGATAGCCAGCTTATGTGACATAATACTGAGTTGGTAGAAATTTATGAAAGGAATCAAGTTATATAAGAGAGGAAAATTTCTAAGTAGACATTCCTAAATTGCTCAGTTTCTACTCCAGATTTTGTCAAACTGACCAAGTATCATGCCACGTAATCTTATCATTAACCACAACTACTAATGAAATGGTAGGATTGAAAAAATGTTAAAACATAAAGGCCTTGATGGAAACATTTGAAATGAGGACTAAATTAAAATAACTTACAAGCATTAGGCACTAAAACATATATTTAGTCTTTCATTTAATTACAAGTCCCTTGTGTTAACAATTCAGGTTGGTTTCTGTTTTTTTGCTGTTTTTTCTCTTTACTCAGTTCCGATGAATAATCTGGTCTTCTGATTTCAGGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTCCATGAATGA

mRNA sequence

ATGGCGAAGCGTTTGGTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTGCCTCCTGCCAAAACCAATTCCGGAATTTTGCTTCCTGAGAAATCCAGTAAGGTGAATCTTTCTTCCGCCTCTCCCCCATTTCGATTCCCCTTAAAACAAAATGTTAATTCGGGTGTTTGTGTATGGGAATTCGTGGGAGAATCGGCTTTCTCTTGCAATTGTGCTTTTGTTGTCGTTGTTTATTTACCGAGATTCTGGAAATTTGCGACACTGAATTCTCTCGAACGACTAGAGTCATTTTCCTTGATGCTTAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTGTCACTGTAAAGGAAGGTGACACTGTCCTCCTACCAGAATATGGAGGCACTGAAGTCAAGCTTGGAGAAAGGCAGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTCCATGAATGA

Coding sequence (CDS)

ATGGCGAAGCGTTTGGTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTGCCTCCTGCCAAAACCAATTCCGGAATTTTGCTTCCTGAGAAATCCAGTAAGGTGAATCTTTCTTCCGCCTCTCCCCCATTTCGATTCCCCTTAAAACAAAATGTTAATTCGGGTGTTTGTGTATGGGAATTCGTGGGAGAATCGGCTTTCTCTTGCAATTGTGCTTTTGTTGTCGTTGTTTATTTACCGAGATTCTGGAAATTTGCGACACTGAATTCTCTCGAACGACTAGAGTCATTTTCCTTGATGCTTAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTGTCACTGTAAAGGAAGGTGACACTGTCCTCCTACCAGAATATGGAGGCACTGAAGTCAAGCTTGGAGAAAGGCAGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTCCATGAATGA

Protein sequence

MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVWEFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE

Homology

[Close]

BLAST of HG10017558 vs. NCBI nr
Match: XP_038881343.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-35
Identity = 95/163 (58.28%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVIS+GPGARDREGK
Sbjct: 61  -----------------------------------------LNSGKVISIGPGARDREGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIPVTVKEGDTVLLPEYGGTEVKLGE+QFYLFRDEDLLGTLHE
Sbjct: 121 IIPVTVKEGDTVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. NCBI nr
Match: XP_022966634.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-33
Identity = 91/163 (55.83%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVISVGPG RDR+G 
Sbjct: 61  -----------------------------------------LNSGKVISVGPGTRDRDGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIPV VKEG+TVLLPEYGGTEVKLGE+QFYLFRDEDLLGTLHE
Sbjct: 121 IIPVIVKEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. NCBI nr
Match: XP_022931931.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6595428.1 10 kDa chaperonin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027431.1 10 kDa chaperonin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.8 bits (382), Expect = 5.3e-33
Identity = 90/163 (55.21%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVISVGPG RDR+G 
Sbjct: 61  -----------------------------------------LNSGKVISVGPGTRDRDGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIPV VKEG+TVLLPEYGGTEVKLGE+QFYL+RDEDLLGTLHE
Sbjct: 121 IIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. NCBI nr
Match: XP_022154455.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-33
Identity = 89/163 (54.60%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKV+SVGPG RDREG 
Sbjct: 61  -----------------------------------------LNSGKVLSVGPGTRDREGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           +IPVTVKEGDTVLLPEYGGTEVKLG++Q YLFRDEDLLGTLHE
Sbjct: 121 LIPVTVKEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. NCBI nr
Match: XP_008455733.1 (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 9.0e-33
Identity = 89/163 (54.60%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKSSK                         
Sbjct: 1   MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVI+VGPGARDREGK
Sbjct: 61  -----------------------------------------LNSGKVIAVGPGARDREGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIP++VKEGD VLLPEYGG EVKLGE+QFYLFRDEDLLGTLHE
Sbjct: 121 IIPISVKEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.4e-30
Identity = 73/163 (44.79%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           M KRL+P  NR+L+++++ PAKT SGILLPEKSSK                         
Sbjct: 1   MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVI+VGPG+RD++GK
Sbjct: 61  -----------------------------------------LNSGKVIAVGPGSRDKDGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           +IPV+VKEGDTVLLPEYGGT+VKLGE +++LFRDED+LGTLHE
Sbjct: 121 LIPVSVKEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-29
Identity = 72/163 (44.17%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           M KRL+P  NR+L++ ++ PAKT SGILLPEK+SK                         
Sbjct: 1   MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVI+VGPG+RD++GK
Sbjct: 61  -----------------------------------------LNSGKVIAVGPGSRDKDGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           +IPV+VKEGDTVLLPEYGGT+VKLGE++++LFRDED+LGTLHE
Sbjct: 121 LIPVSVKEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy Swiss-Prot
Match: O59804 (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp10 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-12
Identity = 49/162 (30.25%), Postives = 70/162 (43.21%), Query Frame = 0


Query: 2   AKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVWE 61
           AK +VPLL+R+L+++I    KT SGI LPEKS +                          
Sbjct: 8   AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVE-------------------------- 67

Query: 62  FVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGKI 121
                                                   L+ G+VISVG G  ++EGK+
Sbjct: 68  ---------------------------------------KLSEGRVISVGKGGYNKEGKL 104

Query: 122 IPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
              +V  GD VLLP YGG+ +K+GE ++ L+RD +LL  + E
Sbjct: 128 AQPSVAVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104

[Close]

BLAST of HG10017558 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11
Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 107 VISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLG 160
           V++VG G + + G+I PV+VK GD VLLPEYGGT+V L ++ ++LFRD D+LG
Sbjct: 46  VVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILG 98

[Close]

BLAST of HG10017558 vs. ExPASy Swiss-Prot
Match: P61603 (10 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 5.9e-11
Identity = 30/53 (56.60%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 107 VISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLG 160
           V++VG G++ + G+I PV+VK GD VLLPEYGGT+V L ++ ++LFRD D+LG
Sbjct: 46  VVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 98

[Close]

BLAST of HG10017558 vs. ExPASy TrEMBL
Match: A0A6J1HUD0 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466260 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 91/163 (55.83%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVISVGPG RDR+G 
Sbjct: 61  -----------------------------------------LNSGKVISVGPGTRDRDGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIPV VKEG+TVLLPEYGGTEVKLGE+QFYLFRDEDLLGTLHE
Sbjct: 121 IIPVIVKEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy TrEMBL
Match: A0A6J1EUZ7 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438208 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33
Identity = 90/163 (55.21%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVISVGPG RDR+G 
Sbjct: 61  -----------------------------------------LNSGKVISVGPGTRDRDGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIPV VKEG+TVLLPEYGGTEVKLGE+QFYL+RDEDLLGTLHE
Sbjct: 121 IIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy TrEMBL
Match: A0A6J1DJN1 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021728 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.3e-33
Identity = 89/163 (54.60%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSK                         
Sbjct: 1   MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKV+SVGPG RDREG 
Sbjct: 61  -----------------------------------------LNSGKVLSVGPGTRDREGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           +IPVTVKEGDTVLLPEYGGTEVKLG++Q YLFRDEDLLGTLHE
Sbjct: 121 LIPVTVKEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy TrEMBL
Match: A0A1S3C2U3 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.3e-33
Identity = 89/163 (54.60%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKSSK                         
Sbjct: 1   MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVI+VGPGARDREGK
Sbjct: 61  -----------------------------------------LNSGKVIAVGPGARDREGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIP++VKEGD VLLPEYGG EVKLGE+QFYLFRDEDLLGTLHE
Sbjct: 121 IIPISVKEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of HG10017558 vs. ExPASy TrEMBL
Match: A0A0A0KYT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G426760 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.2e-32
Identity = 87/163 (53.37%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+K                         
Sbjct: 1   MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVI+VGPGARDREGK
Sbjct: 61  -----------------------------------------LNSGKVIAVGPGARDREGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           IIP++VKEGD VLLPEYGG EVKLGE+QFYLFRDEDLLGTLH+
Sbjct: 121 IIPISVKEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of HG10017558 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 )

HSP 1 Score: 131.7 bits (330), Expect = 5.2e-31
Identity = 73/163 (44.79%), Postives = 91/163 (55.83%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           M KRL+P  NR+L+++++ PAKT SGILLPEKSSK                         
Sbjct: 1   MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSK------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSGKVI+VGPG+RD++GK
Sbjct: 61  -----------------------------------------LNSGKVIAVGPGSRDKDGK 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           +IPV+VKEGDTVLLPEYGGT+VKLGE +++LFRDED+LGTLHE
Sbjct: 121 LIPVSVKEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of HG10017558 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein )

HSP 1 Score: 128.3 bits (321), Expect = 5.8e-30
Identity = 74/163 (45.40%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 1   MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKVNLSSASPPFRFPLKQNVNSGVCVW 60
           MAKRL+P LNRVL+EKI+PP+KT SGILLPEKSS+                         
Sbjct: 1   MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQ------------------------- 60

Query: 61  EFVGESAFSCNCAFVVVVYLPRFWKFATLNSLERLESFSLMLNSGKVISVGPGARDREGK 120
                                                    LNSG+VI+VGPGARDR G 
Sbjct: 61  -----------------------------------------LNSGRVIAVGPGARDRAGN 97

Query: 121 IIPVTVKEGDTVLLPEYGGTEVKLGERQFYLFRDEDLLGTLHE 164
           +IPV+VKEGD VLLPE+GGT+VKLGE++F L+RDED++ TLHE
Sbjct: 121 LIPVSVKEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]

BLAST of HG10017558 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 )

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 105 GKVISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGERQFYL-FRDEDLLGTL 162
           G VI+VGPG+ D EGKI P+ V  G TVL  +Y G + K  +   Y+  R  D++  L
Sbjct: 195 GTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of HG10017558 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 )

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 105 GKVISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGERQFYL-FRDEDLLGTL 162
           G VI+VGPG+ D EGKI P+ V  G TVL  +Y G + K  +   Y+  R  D++  L
Sbjct: 195 GTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of HG10017558 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 )

HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 105 GKVISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGERQFYL-FRDEDLLGTL 162
           G VI+VGPG+ D EGKI P+ V  G TVL  +Y G + K  +   Y+  R  D++  L
Sbjct: 195 GTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

The following BLAST results are available for this feature:

BLAST of HG10017558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881343.1	1.1e-35	58.28	10 kDa chaperonin, mitochondrial-like [Benincasa hispida]	[more]
XP_022966634.1	3.1e-33	55.83	10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]	[more]
XP_022931931.1	5.3e-33	55.21	10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kD...	[more]
XP_022154455.1	6.9e-33	54.60	10 kDa chaperonin, mitochondrial-like [Momordica charantia]	[more]
XP_008455733.1	9.0e-33	54.60	PREDICTED: 10 kDa chaperonin-like [Cucumis melo]	[more]

BLAST of HG10017558 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34893	7.4e-30	44.79	10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S...	[more]
Q96539	2.8e-29	44.17	10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1	[more]
O59804	2.4e-12	30.25	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q64433	2.6e-11	56.60	10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 ...	[more]
P61603	5.9e-11	56.60	10 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=...	[more]

BLAST of HG10017558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUD0	1.5e-33	55.83	10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC11146626...	[more]
A0A6J1EUZ7	2.5e-33	55.21	10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1DJN1	3.3e-33	54.60	10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A1S3C2U3	4.3e-33	54.60	10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1	[more]
A0A0A0KYT6	2.2e-32	53.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G426760 PE=3 SV=1	[more]

BLAST of HG10017558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14980.1	5.2e-31	44.79	chaperonin 10	[more]
AT1G23100.1	5.8e-30	45.40	GroES-like family protein	[more]
AT5G20720.1	4.5e-06	43.10	chaperonin 20	[more]
AT5G20720.2	4.5e-06	43.10	chaperonin 20	[more]
AT5G20720.3	4.5e-06	43.10	chaperonin 20	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 127..139 score: 52.0 coord: 5..20 score: 31.51 coord: 92..113 score: 28.31 coord: 148..161 score: 22.62
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 85..161 e-value: 3.3E-6 score: 33.9
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 103..160 e-value: 1.5E-14 score: 53.8
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..38 coord: 100..163
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 4..161 e-value: 3.13747E-24 score: 88.3331
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 1..60 e-value: 1.2E-5 score: 27.0 coord: 93..163 e-value: 3.6E-18 score: 67.4
None	No IPR available	PANTHER	PTHR10772:SF49	BNAA08G31360D PROTEIN	coord: 1..38 coord: 100..163
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 5..29
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 102..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017558.1	HG10017558.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity