Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTGCAGCTTCTTCCCTTCTTTTTTGTTGCCATTCTTTCTATCTTTCTGCTTTCTGTAGAAGTTGATGGAAGAAAATCTTTACTTCAAAAAGAAGATAGGAAAGACTCTAAGTTTGTCAAGCAAAGTACACTTTTAGATGGAGATTTTCATGGTGAAATGGTGACTAATCATCAAATGAAAAAATTTCCAACTGATTTAGAAGATCCTGGGGATCAAGAGGGCGAAAGTTCTGAAGGTGAAGAAGGATCAGAGGAAGGCATTCCTCCTGGCGATGAAGGAGAATATGGAAGAGGAACGAGAGATGAATCTGAAGAACTTCCTGGAGATGATGGAGGAGAAACGGGAGAATGGATCCCTGGAGATGATGACGGAGAATCTAGCAAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGCGGATCTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGATTCCTGGAGATGACGGAGGCAAATCTGGAGAAATGGAACCTGGAGACAACAAAAAAAAATCTAGAGACAAGAATGTAGGAGATTATATTGTACCTGATCATGGAGATAGAAGGGGGTGA
mRNA sequence
ATGAAGCTGCAGCTTCTTCCCTTCTTTTTTGTTGCCATTCTTTCTATCTTTCTGCTTTCTGTAGAAGTTGATGGAAGAAAATCTTTACTTCAAAAAGAAGATAGGAAAGACTCTAAGTTTGTCAAGCAAAGTACACTTTTAGATGGAGATTTTCATGGTGAAATGGTGACTAATCATCAAATGAAAAAATTTCCAACTGATTTAGAAGATCCTGGGGATCAAGAGGGCGAAAGTTCTGAAGGTGAAGAAGGATCAGAGGAAGGCATTCCTCCTGGCGATGAAGGAGAATATGGAAGAGGAACGAGAGATGAATCTGAAGAACTTCCTGGAGATGATGGAGGAGAAACGGGAGAATGGATCCCTGGAGATGATGACGGAGAATCTAGCAAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGCGGATCTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGATTCCTGGAGATGACGGAGGCAAATCTGGAGAAATGGAACCTGGAGACAACAAAAAAAAATCTAGAGACAAGAATGTAGGAGATTATATTGTACCTGATCATGGAGATAGAAGGGGGTGA
Coding sequence (CDS)
ATGAAGCTGCAGCTTCTTCCCTTCTTTTTTGTTGCCATTCTTTCTATCTTTCTGCTTTCTGTAGAAGTTGATGGAAGAAAATCTTTACTTCAAAAAGAAGATAGGAAAGACTCTAAGTTTGTCAAGCAAAGTACACTTTTAGATGGAGATTTTCATGGTGAAATGGTGACTAATCATCAAATGAAAAAATTTCCAACTGATTTAGAAGATCCTGGGGATCAAGAGGGCGAAAGTTCTGAAGGTGAAGAAGGATCAGAGGAAGGCATTCCTCCTGGCGATGAAGGAGAATATGGAAGAGGAACGAGAGATGAATCTGAAGAACTTCCTGGAGATGATGGAGGAGAAACGGGAGAATGGATCCCTGGAGATGATGACGGAGAATCTAGCAAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGGTTCCTGGAGATGACGGAGGCGGATCTGGAGAAGGGGTTCCTGGAGATGACGGAGGAGAAACTGGAGAAGGGATTCCTGGAGATGACGGAGGCAAATCTGGAGAAATGGAACCTGGAGACAACAAAAAAAAATCTAGAGACAAGAATGTAGGAGATTATATTGTACCTGATCATGGAGATAGAAGGGGGTGA
Protein sequence
MKLQLLPFFFVAILSIFLLSVEVDGRKSLLQKEDRKDSKFVKQSTLLDGDFHGEMVTNHQMKKFPTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGIPGDDGGKSGEMEPGDNKKKSRDKNVGDYIVPDHGDRRG
Homology
BLAST of HG10017550 vs. NCBI nr
Match:
XP_038882385.1 (spore wall protein 2-like [Benincasa hispida])
HSP 1 Score: 153.3 bits (386), Expect = 2.4e-33
Identity = 123/220 (55.91%), Postives = 147/220 (66.82%), Query Frame = 0
Query: 1 MKLQLLPFFFVAILSIFLLSVEVDGRKSLLQKEDR-KDSKFVKQSTLLDGDFHGEMV-TN 60
MKLQ+L AILSIFLLS+EVDGRKSLLQKEDR +D+K KQST+LD DFHG+MV +N
Sbjct: 1 MKLQVL-----AILSIFLLSLEVDGRKSLLQKEDREEDAKLAKQSTILDADFHGKMVASN 60
Query: 61 HQMKKFPTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGE 120
HQMKKFPTDLED G+QE ESSEG+EG EEGIP GDEGEYGRGT + GE+GE
Sbjct: 61 HQMKKFPTDLEDAGNQEDESSEGDEGLEEGIPEGDEGEYGRGTPE----------GESGE 120
Query: 121 WIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGE 180
+P D ++GG++ E PGDD GE+ GDDG G G+ DD GE+ E
Sbjct: 121 -VPED---------TSNNGGDSEETEPGDDQGES----KGDDGDGDGD---RDDEGESRE 180
Query: 181 GIPGDDGGKSGEMEPGDNKKKSRDKNVGDYIVPDHGDRRG 219
G GD GG G M DN+++SR + IV D D+RG
Sbjct: 181 GDLGDYGGDFGGMVHEDNQRESRGDHGDRDIVGDDVDKRG 188
BLAST of HG10017550 vs. NCBI nr
Match:
TYK09628.1 (hypothetical protein E5676_scaffold447G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 114.0 bits (284), Expect = 1.6e-21
Identity = 111/198 (56.06%), Postives = 129/198 (65.15%), Query Frame = 0
Query: 2 KLQLLPFFFVAI-LSIFLLSVEVDGRKSLLQKEDRKDS-KFVKQSTLLDGDFHGEMVTNH 61
KLQLL FFFV+I +SI L+S +VDGRKSLLQKE R DS K V+QST LD DFHGEMV N+
Sbjct: 3 KLQLLLFFFVSITVSILLVSPKVDGRKSLLQKEGRDDSNKLVEQSTTLDADFHGEMVGNN 62
Query: 62 QMKKFPTDLED-PGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETG- 121
Q KK PTDLED P DQ+GE+SE E+GSEE +P +EG ESEE GDDGGE+G
Sbjct: 63 QKKKLPTDLEDNPEDQKGENSEDEKGSEEDVPGDEEG--------ESEE-AGDDGGESGS 122
Query: 122 -EWIPGD--DDGESSKGVP------GDDGGETGEGVPGD-DGGETGEGVPGDDGGGSGEG 181
E GD D GE S G GDD G EG G+ G E+GE GGGSGE
Sbjct: 123 TEGEYGDLGDCGEESGGPKDCGAEFGDDDGGAFEGDEGEAPGEESGEVPEYQGGGGSGEE 182
Query: 182 VPGDDGGE-TGEGIPGDD 185
V D+ GE + E +PGD+
Sbjct: 183 VSRDNNGEDSEEKVPGDN 191
BLAST of HG10017550 vs. NCBI nr
Match:
KGN54678.1 (hypothetical protein Csa_012366 [Cucumis sativus])
HSP 1 Score: 103.6 bits (257), Expect = 2.2e-18
Identity = 109/214 (50.93%), Postives = 126/214 (58.88%), Query Frame = 0
Query: 2 KLQLLP-FFFVAILSIFLL-SVEVDGRKSLLQKEDRKD-SKFVKQSTLLDGDFHGEMVTN 61
KLQLL FFFV+I+SI LL S EVDGRKSLLQKE R D +K VKQST LD DFHGEMV
Sbjct: 3 KLQLLDLFFFVSIVSIVLLVSQEVDGRKSLLQKEGRDDFNKLVKQSTTLDADFHGEMVGR 62
Query: 62 HQMKKFPTDLED-PGDQEGESSEGEE--GSEEGIPPGDEGEYGRGTRDESEELPGDDGGE 121
+Q KK PTDLED P DQ+GE+SE +E EE +P +EGEYG D G+
Sbjct: 63 NQKKKLPTDLEDNPEDQKGENSEADEKGSEEEDVPGEEEGEYG-------------DLGD 122
Query: 122 TGEWIPGDDDGESSKGVPGD------DGGETGEGVPGDDGGETGEGVPGDDGGG-----S 181
G+ GD G+ S G GD GGE G+ DDGG + GDDG G S
Sbjct: 123 VGDL--GDCGGDESGGPGGDFVYPNNCGGEFGD----DDGG----ALEGDDGEGPGSEES 182
Query: 182 GEGVPGDDGGETGEGIPGDDGGK--SGEMEPGDN 197
GE DGGE+GE + D G+ S E PGDN
Sbjct: 183 GEAPEDQDGGESGEEVSRDKNGEEYSKEKAPGDN 193
BLAST of HG10017550 vs. NCBI nr
Match:
WP_193386596.1 (hypothetical protein, partial [Corynebacterium otitidis])
HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 70/150 (46.67%), Postives = 91/150 (60.67%), Query Frame = 0
Query: 71 PGDQEGESSEGEE--GSEEGIP------PGDE----GEYGRGTRDESEELPGDDGGETGE 130
PGD +G EG+ G ++G+P PGD+ GE G G + + LPGDD GE G+
Sbjct: 76 PGDDDGLPGEGDSLPGDDDGLPGEGDSLPGDDDGLPGE-GDGLPGDDDGLPGDDEGE-GD 135
Query: 131 WIPGDDDGESSKGVPGDDGGETGEGVPGDDGGETG--EGVPGDDGG------GSGEGVPG 190
+PGDDD G+PGDD GE G+G+PGDD G G +G+PGDD G G G+G+PG
Sbjct: 136 GLPGDDD-----GLPGDDEGE-GDGLPGDDDGLPGDDDGLPGDDDGLPGDDEGEGDGLPG 195
Query: 191 DDGGETGEG--IPGDDGGKSGEME--PGDN 197
DD G GEG +PGDD G G+ + PGD+
Sbjct: 196 DDDGLPGEGDSLPGDDDGLPGDDDGLPGDD 217
BLAST of HG10017550 vs. NCBI nr
Match:
WP_212643760.1 (hypothetical protein [Nocardiopsis sp. HDS12] >QUX31058.1 hypothetical protein KGD83_11525 [Nocardiopsis sp. HDS12])
HSP 1 Score: 60.1 bits (144), Expect = 2.8e-05
Identity = 61/135 (45.19%), Postives = 70/135 (51.85%), Query Frame = 0
Query: 65 PTDLEDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIP--- 124
P PGD +G G++G G PGD G+ G GDDGG+ G P
Sbjct: 60 PPIFPGPGDGDG---GGDDGGNPGPGPGDPGDGG-----------GDDGGDPGPGDPGDG 119
Query: 125 -GDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGI 184
GDD G+ G PGD GG+ G PGD GG+ G G PGD GG G G PGD GG+ G G
Sbjct: 120 GGDDGGDPGPGDPGDGGGDDG-NPPGDGGGDDGGGDPGDGGGDDGGGDPGDGGGDDGGGD 179
Query: 185 PGDDGGKSGEMEPGD 196
PGD GG G PGD
Sbjct: 180 PGDGGGDDGGNPPGD 179
BLAST of HG10017550 vs. ExPASy Swiss-Prot
Match:
O36421 (Uncharacterized gene 73 protein OS=Alcelaphine herpesvirus 1 (strain C500) OX=654901 GN=73 PE=4 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 58/131 (44.27%), Postives = 72/131 (54.96%), Query Frame = 0
Query: 69 EDPGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETGEWIPGDDDGES 128
E+ G + GE EG EG E G G+ GE G G G +GGE GE G + GE
Sbjct: 916 EEDGGEGGEGGEGGEGGEGG-EGGEGGEGGEGGE-------GGEGGEGGEGGEGGEGGEG 975
Query: 129 SKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGIPGDDGGKS 188
+G G +GGE GEG G +GGE GEG G +GG GEG G +GGE G+G G +GG+
Sbjct: 976 GEGGEGGEGGEGGEGGEGGEGGEGGEGGEGGEGGEGGEGGEGGEGGERGKGGEGGEGGEG 1035
Query: 189 GEMEPGDNKKK 200
GE G + K
Sbjct: 1036 GEGGEGSEEDK 1038
BLAST of HG10017550 vs. ExPASy TrEMBL
Match:
A0A5D3CEH4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00230 PE=4 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 7.9e-22
Identity = 111/198 (56.06%), Postives = 129/198 (65.15%), Query Frame = 0
Query: 2 KLQLLPFFFVAI-LSIFLLSVEVDGRKSLLQKEDRKDS-KFVKQSTLLDGDFHGEMVTNH 61
KLQLL FFFV+I +SI L+S +VDGRKSLLQKE R DS K V+QST LD DFHGEMV N+
Sbjct: 3 KLQLLLFFFVSITVSILLVSPKVDGRKSLLQKEGRDDSNKLVEQSTTLDADFHGEMVGNN 62
Query: 62 QMKKFPTDLED-PGDQEGESSEGEEGSEEGIPPGDEGEYGRGTRDESEELPGDDGGETG- 121
Q KK PTDLED P DQ+GE+SE E+GSEE +P +EG ESEE GDDGGE+G
Sbjct: 63 QKKKLPTDLEDNPEDQKGENSEDEKGSEEDVPGDEEG--------ESEE-AGDDGGESGS 122
Query: 122 -EWIPGD--DDGESSKGVP------GDDGGETGEGVPGD-DGGETGEGVPGDDGGGSGEG 181
E GD D GE S G GDD G EG G+ G E+GE GGGSGE
Sbjct: 123 TEGEYGDLGDCGEESGGPKDCGAEFGDDDGGAFEGDEGEAPGEESGEVPEYQGGGGSGEE 182
Query: 182 VPGDDGGE-TGEGIPGDD 185
V D+ GE + E +PGD+
Sbjct: 183 VSRDNNGEDSEEKVPGDN 191
BLAST of HG10017550 vs. ExPASy TrEMBL
Match:
A0A0A0KYS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420190 PE=4 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 1.1e-18
Identity = 109/214 (50.93%), Postives = 126/214 (58.88%), Query Frame = 0
Query: 2 KLQLLP-FFFVAILSIFLL-SVEVDGRKSLLQKEDRKD-SKFVKQSTLLDGDFHGEMVTN 61
KLQLL FFFV+I+SI LL S EVDGRKSLLQKE R D +K VKQST LD DFHGEMV
Sbjct: 3 KLQLLDLFFFVSIVSIVLLVSQEVDGRKSLLQKEGRDDFNKLVKQSTTLDADFHGEMVGR 62
Query: 62 HQMKKFPTDLED-PGDQEGESSEGEE--GSEEGIPPGDEGEYGRGTRDESEELPGDDGGE 121
+Q KK PTDLED P DQ+GE+SE +E EE +P +EGEYG D G+
Sbjct: 63 NQKKKLPTDLEDNPEDQKGENSEADEKGSEEEDVPGEEEGEYG-------------DLGD 122
Query: 122 TGEWIPGDDDGESSKGVPGD------DGGETGEGVPGDDGGETGEGVPGDDGGG-----S 181
G+ GD G+ S G GD GGE G+ DDGG + GDDG G S
Sbjct: 123 VGDL--GDCGGDESGGPGGDFVYPNNCGGEFGD----DDGG----ALEGDDGEGPGSEES 182
Query: 182 GEGVPGDDGGETGEGIPGDDGGK--SGEMEPGDN 197
GE DGGE+GE + D G+ S E PGDN
Sbjct: 183 GEAPEDQDGGESGEEVSRDKNGEEYSKEKAPGDN 193
BLAST of HG10017550 vs. ExPASy TrEMBL
Match:
A0A7H5FKL3 (Uncharacterized protein OS=Cobetia sp. MM1IDA2H-1 OX=1268241 GN=BOH68_05215 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 9.7e-04
Identity = 62/157 (39.49%), Postives = 73/157 (46.50%), Query Frame = 0
Query: 66 TDLEDPGDQEGESSEGEEGSEEG----IPPGDEGEYGRGTRDESEELPGDDGGETGEWIP 125
T DPGD +G + + G +G PGD G+ GT D PGD G TG P
Sbjct: 120 TGTTDPGDGDGSTGTTDPGDGDGSTGTTDPGD-GDGSTGTTD-----PGDGDGSTGTTDP 179
Query: 126 GDDDGESSKGVPGDDGGETGEGVPGDDGGETGEGVPGDDGGGSGEGVPGDDGGETGEGIP 185
GD DG + PGD G TG PGD G TG PGD G +G PGD G TG P
Sbjct: 180 GDGDGSTGTTDPGDGDGSTGTTDPGDGDGSTGTTDPGDGDGSTGTTDPGDGDGSTGTTDP 239
Query: 186 GDDGGKSGEMEPGDNKKKSRDKNVGDYIVPDHGDRRG 219
GD G +G +PGD + + D PD G G
Sbjct: 240 GDGDGSTGTTDPGDGDGSTGTTDPDDGSNPDDGGEPG 270
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038882385.1 | 2.4e-33 | 55.91 | spore wall protein 2-like [Benincasa hispida] | [more] |
| TYK09628.1 | 1.6e-21 | 56.06 | hypothetical protein E5676_scaffold447G00230 [Cucumis melo var. makuwa] | [more] |
| KGN54678.1 | 2.2e-18 | 50.93 | hypothetical protein Csa_012366 [Cucumis sativus] | [more] |
| WP_193386596.1 | 1.6e-05 | 46.67 | hypothetical protein, partial [Corynebacterium otitidis] | [more] |
| WP_212643760.1 | 2.8e-05 | 45.19 | hypothetical protein [Nocardiopsis sp. HDS12] >QUX31058.1 hypothetical protein K... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O36421 | 4.5e-06 | 44.27 | Uncharacterized gene 73 protein OS=Alcelaphine herpesvirus 1 (strain C500) OX=65... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CEH4 | 7.9e-22 | 56.06 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0KYS7 | 1.1e-18 | 50.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420190 PE=4 SV=1 | [more] |
| A0A7H5FKL3 | 9.7e-04 | 39.49 | Uncharacterized protein OS=Cobetia sp. MM1IDA2H-1 OX=1268241 GN=BOH68_05215 PE=4... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
