HG10017497 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGTTGGTACTTTTCAAATTGCTTATGTGATTTTATTTTCTGTTTTCCGAGTATTTATTGAAAGTTCTTTATTCAATGACTCAGTCTATTATACATTCATTTTCGTGTATTTGAAGGTGTTTGGTTTGATGCATACATAGGATTGTAATTGGCTCTTTTCAGCTATGTTTTTCTGATAGATTATAATTGGCTCTTTTCAGCATTTTGGTTTAAAGTTATTGCTCTGTTGTTTTTTTTCTTCTTATATTTGCATTCAGTTTAAACTTGACAAGGTTTAATGAGAGAGTTATGAAGATACAAACGGATACAAAAAAACCAAGCCCACAACAGGAAGCACCCTAGAAAAAGGGTCTCCAATCTAACAAAAATAAGATCTAACGAATAATTACAAAAAGAACTCGTCAGAGTCGCCCAAAGCAAAACATTAAACTTTTCCGGGGACCAAACAAAGCTTCCCTCTTAGCCCCTCAAAAAATCCTATTGTTTTTCTCTCCCCAAATGCCCCATAACATAGCATACACCCCAACCTTCCATAAATTATCCCCTCTCCCTCCACACGGCGAATGGAAGAGGAACTCCTCAATCATAACACTAAAATTTCTATGCTCGGCTAACTTGTAGTCAAACACCCCAAAGAAGATGTTCCGAACCAAACATGCAAAAGTACAATTTCAAAAAGTGATCCAAGTCTTCCTCGGCCATTTGCGAGGAATACAACAAAAAGGAGCAACCAAGGACATCTTTCTTGAAAGCCTATCCAAGGTATTAATTCTTCCACGAATCACCTGCCAAATAAAAAATTTCACCTTCGTTGGAATTTTCACCTTCCAAAGAAGAGAAAAAAACTGACTCTCTAAAGGGAAAAAGATCCAAGAGATTTAGAAAAAGAAAACTCTTAGAAGGGTTAAAGACTCCAACAACAAAAATCCTTTCTCCCTTGCCTAACCCCAACATCCCCCAATACGAAAGGAGGGTCACAACCTCCATCGTTACCCTATTGGACAAAGGACAACGAAACTCGAACAAAACACGAGAAGAGCTCTCTGAAAGCATCAAAACATCAGCAACAAAACAAATTTTCTTATTAGAAATGTGATAAGGATGAGGAAATTTACTGCAAAGGGGGCGATCCCCCAACTCATCTCCCACCACATAGTGGATCAACTCAGAGAACGAGGGGGCATCCAAAGAAATCCCTTTCAATGGATTCCTGAAGTGCCTTTAATCCTATCCGATATCCTATCAAAAGGATGAGGACCATACTTGCTTATAATAATCCAAGATCGTAGGGGTGAGGACTTAAAGGGTAAAACATAGAGCTCCCACATGTGATAATGGTGGTCTCTTTATATAACTATTGTTTGTCTGATGTTTAAATTGCAAAAGCTCTCATCTCATATTTTTGAAAAGAACCATTTTTATGAAGTGGTATAATTCCTTAGGATAATACTTTTGGCACCACGGCTCGTTGCCTGTTGGATTGGCATAATTGTTCGAATCTTGCAAGAGCATTTGTTTGTGATTTTTGATAATTAAACAAACATTTGCGACAGGTGCTCTGGTAAAGATTATATCAACCTTACCTTCTCTTTAATGAAAATCTAAGCAATTAATATTTTATGTCATTAGCATTTGGCAACTGTAACTAGACCTCAAGCATAAGCTCCTTAAACTTTTTGCCTTATTCTGTCCTATGCTTGTCTACATGTTTGTGATTGTGTATGGAATCATATGCTTGCAAGTGTATAGTTCTGCATTCATATTGCCATATGTTACAGTTTTGAGAATATTGTCAAATTTTCTGGATGTAGCAGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGTCTGGGTAAACTTGCATTCTTTCTTGAACTATTAGTATTAGTTGTAGCAACATTTAGGAGTGGTTCAAATTATGGACATTCTTTTTAACTGGAGCCCTGTTTTGTAATTTTCTTGTCTTTACCTTACCCCCTGTTTTCTGTTGCTCTTTTGGCTCCTTTAGGTTCAGGCCTCCCCTTTTTGTAGGGCTCTTTTTTTGGCTTGCCCGTTTATATTCTTTCATTTGTTCTCAAATGAAAGTCATTTTCTTATCCGGAAGGGCACTTTTTATTTTGATCCTGTCAGATTGTTACTTATCAGTGGCCATCGTGGATGTTTAACTTTGAAAGTAGAAAAGAAGTCGACAAGATACTAGATGTAGTTTATTCCTGTAATCATTTCCATATATCTTAAATGTTTTTAAGAAATCAATGCTGGAAACTGTGGAAGCTTTTGAATTGATTAGGCTTGTTTTTTGTCCTGTGCATTTCATTCAATTATACTTGTTGAAAAGGGAATTTTTTTTGTTTCATCACTGTCAGTTGTCAGTTAACTTATTGAAAAGTTTCTGTCCTAACTATGTAATCATCTTCTTGTAGGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGA ATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGTCTGGGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGA ATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGTCTGGGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGA MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVRCLGCGGSGNTMCPECGGRGHLGSK Homology
BLAST of HG10017497 vs. NCBI nr
Match: XP_038881866.1 (uncharacterized protein LOC120073222 isoform X2 [Benincasa hispida]) HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77 Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0
BLAST of HG10017497 vs. NCBI nr
Match: XP_011653948.1 (uncharacterized protein LOC101220837 isoform X2 [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 5.8e-77 Identity = 147/160 (91.88%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of HG10017497 vs. NCBI nr
Match: XP_038881865.1 (uncharacterized protein LOC120073222 isoform X1 [Benincasa hispida]) HSP 1 Score: 293.9 bits (751), Expect = 8.4e-76 Identity = 148/161 (91.93%), Postives = 152/161 (94.41%), Query Frame = 0
BLAST of HG10017497 vs. NCBI nr
Match: XP_004144653.1 (uncharacterized protein LOC101220837 isoform X1 [Cucumis sativus] >KAE8649773.1 hypothetical protein Csa_012749 [Cucumis sativus]) HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75 Identity = 147/161 (91.30%), Postives = 154/161 (95.65%), Query Frame = 0
BLAST of HG10017497 vs. NCBI nr
Match: XP_008442041.1 (PREDICTED: uncharacterized protein LOC103486023 isoform X2 [Cucumis melo]) HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75 Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 0
BLAST of HG10017497 vs. ExPASy Swiss-Prot
Match: Q6YUA8 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSA2 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.2e-04 Identity = 25/73 (34.25%), Postives = 35/73 (47.95%), Query Frame = 0
BLAST of HG10017497 vs. ExPASy TrEMBL
Match: A0A0A0L441 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G580370 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77 Identity = 147/160 (91.88%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of HG10017497 vs. ExPASy TrEMBL
Match: A0A1S3B5F7 (uncharacterized protein LOC103486023 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486023 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75 Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 0
BLAST of HG10017497 vs. ExPASy TrEMBL
Match: A0A1S3B4T2 (uncharacterized protein LOC103486023 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486023 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 5.0e-74 Identity = 143/161 (88.82%), Postives = 153/161 (95.03%), Query Frame = 0
BLAST of HG10017497 vs. ExPASy TrEMBL
Match: A0A6J1GFH6 (uncharacterized protein LOC111453701 OS=Cucurbita moschata OX=3662 GN=LOC111453701 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73 Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of HG10017497 vs. ExPASy TrEMBL
Match: A0A6J1DNW0 (uncharacterized protein LOC111021761 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021761 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 5.2e-71 Identity = 139/164 (84.76%), Postives = 148/164 (90.24%), Query Frame = 0
BLAST of HG10017497 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein ) HSP 1 Score: 174.9 bits (442), Expect = 5.3e-44 Identity = 80/119 (67.23%), Postives = 97/119 (81.51%), Query Frame = 0
BLAST of HG10017497 vs. TAIR 10
Match: AT2G34860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 4.1e-04 Identity = 20/56 (35.71%), Postives = 28/56 (50.00%), Query Frame = 0
BLAST of HG10017497 vs. TAIR 10
Match: AT2G34860.2 (DnaJ/Hsp40 cysteine-rich domain superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 4.1e-04 Identity = 20/56 (35.71%), Postives = 28/56 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|