HG10017493 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017493
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	leucine-rich repeat extensin-like protein 5
Location	Chr03: 14912382 .. 14913550 (+)
RNA-Seq Expression	HG10017493
Synteny	HG10017493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCTCAAATCAAACCCTATAGTATTTGATGGTCTTCCACTGGAATTTCATTGCTTTTTCAAGTTTTCGCCTTCCACGTACTTTGTCTTTTTCTTTGTCTACTCTTTCAATTTTCAAGGATACACAAAGGGGGCAAGCTGTAGACACCGTATTTGGTCCGTCTCGTTTTTTAAATTGTTTAATTTTATTCTTATTTTTTATATTTTTAATTATTACTCAAATGTTGAAATTTAATGAAAATTGGAGTTGTCACGTGGATTGAAGAAGGGTGTTATAACCTTCAACGTCAGTTACATTTTTCTACCTATAAATAAGACCGAGACCATTGATCGAAGGTATGCTCAAACTTGAGCGTCGGAGTGTGTATGGCTAGATGCCACACCCGTACTCATTTGCTTATGTCTTGCAGGCACTCAGACGAATCTTTCCCAAAGAAAACAAATTTACGGTTGATCCATTTTTTAGCATCAACAGTGTCTAGAAGTAAGAAAGTATTGTTTGGAATTTTTGTTCTTCATTTCATTCTTGGAGGTGAATTTACCACCAACCAAATAGAAGCAAGAAAGTTAGCAGAAGTCCATGGTAATAATGTTGATGTTCTTAGATCTCAACTAGAAGTAGACATTCCACAGCTTCCTTGGATTAAGATTAACTTTAGAGTTTTTTCAAAGTCCAGTCCGATACATAACTCTTCTCCACCTCTATCTAGAAATATTTATTTTGGAGTTTATCCAAAGGGCTCTTTTATACCTCCACCCGCTCCGAGTCCGATACATAACTCTTCTCCACCTCCATCTAGAAATATTTATTTTGGAGTTTATCCAAAGAGCTCTTTTATACCTTCACCCAGTCCGAGTTCGATACATAACTCTTATCCACCTCCATCCAGAAATATTTATTTTGGAGTTTATCCAAAGAGCTCTTTTATACCTCCACCTGGTCCGAGTCTGATACATAACTCTTCTCCACCTCCATCCAAAAATATTTATTTTGGAGTTTATTCAAAGGGCACTTTTATACCTCCACTTGGTCCGAGCCCAATACATAACTCTTCTCCTCCGCCATCCAAAAATATTTATTTTGGTGTTTATCCAAAGGGCTCTTTTATACCTCCACCTTGCCCGAGCCCAATACACAACTCTTCTACTCCTCCAAATAAATTTTAA

mRNA sequence

ATGCCGCTCAAATCAAACCCTATAGTATTTGATGGTCTTCCACTGGAATTTCATTGCTTTTTCAAGTTTTCGCCTTCCACAAGTAAGAAAGTATTGTTTGGAATTTTTGTTCTTCATTTCATTCTTGGAGGTGAATTTACCACCAACCAAATAGAAGCAAGAAAGTTAGCAGAAGTCCATGGTAATAATGTTGATGTTCTTAGATCTCAACTAGAAGTAGACATTCCACAGCTTCCTTGGATTAAGATTAACTTTAGAGTTTTTTCAAAGTCCAGTCCGATACATAACTCTTCTCCACCTCTATCTAGAAATATTTATTTTGGAGTTTATCCAAAGGGCTCTTTTATACCTCCACCCGCTCCGAGTCCGATACATAACTCTTCTCCACCTCCATCTAGAAATATTTATTTTGGAGTTTATCCAAAGAGCTCTTTTATACCTTCACCCAGTCCGAGTTCGATACATAACTCTTATCCACCTCCATCCAGAAATATTTATTTTGGAGTTTATCCAAAGAGCTCTTTTATACCTCCACCTGGTCCGAGTCTGATACATAACTCTTCTCCACCTCCATCCAAAAATATTTATTTTGGAGTTTATTCAAAGGGCACTTTTATACCTCCACTTGGTCCGAGCCCAATACATAACTCTTCTCCTCCGCCATCCAAAAATATTTATTTTGGTGTTTATCCAAAGGGCTCTTTTATACCTCCACCTTGCCCGAGCCCAATACACAACTCTTCTACTCCTCCAAATAAATTTTAA

Coding sequence (CDS)

ATGCCGCTCAAATCAAACCCTATAGTATTTGATGGTCTTCCACTGGAATTTCATTGCTTTTTCAAGTTTTCGCCTTCCACAAGTAAGAAAGTATTGTTTGGAATTTTTGTTCTTCATTTCATTCTTGGAGGTGAATTTACCACCAACCAAATAGAAGCAAGAAAGTTAGCAGAAGTCCATGGTAATAATGTTGATGTTCTTAGATCTCAACTAGAAGTAGACATTCCACAGCTTCCTTGGATTAAGATTAACTTTAGAGTTTTTTCAAAGTCCAGTCCGATACATAACTCTTCTCCACCTCTATCTAGAAATATTTATTTTGGAGTTTATCCAAAGGGCTCTTTTATACCTCCACCCGCTCCGAGTCCGATACATAACTCTTCTCCACCTCCATCTAGAAATATTTATTTTGGAGTTTATCCAAAGAGCTCTTTTATACCTTCACCCAGTCCGAGTTCGATACATAACTCTTATCCACCTCCATCCAGAAATATTTATTTTGGAGTTTATCCAAAGAGCTCTTTTATACCTCCACCTGGTCCGAGTCTGATACATAACTCTTCTCCACCTCCATCCAAAAATATTTATTTTGGAGTTTATTCAAAGGGCACTTTTATACCTCCACTTGGTCCGAGCCCAATACATAACTCTTCTCCTCCGCCATCCAAAAATATTTATTTTGGTGTTTATCCAAAGGGCTCTTTTATACCTCCACCTTGCCCGAGCCCAATACACAACTCTTCTACTCCTCCAAATAAATTTTAA

Protein sequence

MPLKSNPIVFDGLPLEFHCFFKFSPSTSKKVLFGIFVLHFILGGEFTTNQIEARKLAEVHGNNVDVLRSQLEVDIPQLPWIKINFRVFSKSSPIHNSSPPLSRNIYFGVYPKGSFIPPPAPSPIHNSSPPPSRNIYFGVYPKSSFIPSPSPSSIHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPLGPSPIHNSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPNKF

Homology

[Close]

BLAST of HG10017493 vs. NCBI nr
Match: XP_004498022.1 (proline-rich protein 2-like [Cicer arietinum])

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-19
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 96  NSSPPLSRNIYFGVYPKGSFIPPPAPS--PIHNSSPPPSRNIYFGVYPKSSFIPS-PSPS 155
           + SPP  RN+ FG  PKG ++PP  PS    ++S PPP  N+ FGV  K   +PS PS  
Sbjct: 130 SDSPPPHRNMNFGRLPKG-YVPPSRPSKGSSYSSPPPPHTNLNFGVLLKGHVLPSGPSTR 189

Query: 156 SIHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPLGPS 215
              +  PPP  N++FG+ PK  ++PP GPS   + SPPP  N+ FGV  KG  +P  GPS
Sbjct: 190 FSDSPPPPPHTNLHFGMLPK-GYVPPSGPSTRFSDSPPPHTNLNFGVLLKGHVLPS-GPS 249

Query: 216 PIHNSS--PPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPNK 254
              + S  PPP  N++F + PKG ++PP  PS   + S PP +
Sbjct: 250 TRFSDSPPPPPHTNLHFSMLPKG-YVPPSGPSTRLSDSPPPRR 288

[Close]

BLAST of HG10017493 vs. NCBI nr
Match: XP_012570444.1 (leucine-rich repeat extensin-like protein 5 [Cicer arietinum])

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-16
Identity = 78/202 (38.61%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 67  LRSQLEVDIPQLPWIKINFRVFSKSSPIHNSSP-PLSRNIYFGVYPKGSFIPPPAPSPIH 126
           L S + ++   LP  K +   F  S+    S P P  RN+ FG+ PKG  +PP  PS   
Sbjct: 98  LPSHINLNFGMLP--KGHIPPFGPSTGSSYSPPSPPRRNMNFGILPKG-HVPPSKPSTRS 157

Query: 127 NSS--PPPSRNIYFGVYPKSSFIPS------------PSPSSIHNSYPPPSRNIYFGVYP 186
           + S  PPP  N++FG+ PKS   PS            PS  S ++S PPP  N+ FGV P
Sbjct: 158 SDSPPPPPHTNLHFGMLPKSHVPPSEPTTKRLFSPSRPSKGSSYSSPPPPHTNLNFGVLP 217

Query: 187 KSSFIPPPGPSLIHNSSP--PPSKNIYFGVYSKGTFIPPLGPSPIHNSSPPPSKNIYFGV 246
           K   +PP  PS   + SP  P   N++F +  KG + PP GPS   + SPPP +NI FG 
Sbjct: 218 K-GHVPPSKPSTGSSDSPPLPHHTNLHFSMLPKG-YAPPSGPSTRLSDSPPPHRNINFGK 277

Query: 247 YPKGSFIPPPCPSPIHNSSTPP 252
            PK  ++PP  PS      +PP
Sbjct: 278 LPK-DYVPPSRPSNGSKYYSPP 293

[Close]

BLAST of HG10017493 vs. NCBI nr
Match: KAF3447487.1 (hypothetical protein FNV43_RR12673 [Rhamnella rubrinervis])

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-15
Identity = 72/219 (32.88%), Postives = 100/219 (45.66%), Query Frame = 0


Query: 82  KINFRVFSKSSPIHNS------------SPPL----SRNIYFGVYPKGSFIPPPAPSPIH 141
           K +F +  K +PI  S            SPP     S   +FG+ PKG+ IPP  P+P  
Sbjct: 78  KFHFGMLPKGTPIPPSGPNPRDPNIPPPSPPTQSYESNKFHFGMLPKGTPIPPSGPNPRD 137

Query: 142 NSSPPP--------SRNIYFGVYPKSSFIPSPSPSSIHNSYPPP--------SRNIYFGV 201
            + PPP        S   +FG+ PK + IP   P+    + PPP        S   +FG+
Sbjct: 138 PNIPPPSPPAQSYESNKFHFGMLPKGTPIPPSGPNPRDPNIPPPSPPAQSYESNKFHFGM 197

Query: 202 YPKSSFIPPPGPSLIHNSSPPP--------SKNIYFGVYSKGTFIPPLGPSPIHNSSPPP 253
            PK + IPP GP+    + PPP        S   +F +  KGT +PP GPS    + PPP
Sbjct: 198 LPKGTPIPPSGPNPRDPNIPPPSPPTQSYESSKFHFRILPKGTPVPPSGPSTRDPNIPPP 257

[Close]

BLAST of HG10017493 vs. NCBI nr
Match: CAB4314850.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-14
Identity = 78/218 (35.78%), Postives = 94/218 (43.12%), Query Frame = 0


Query: 43  GGEFTTNQIEARKLAEVH----GNNVDVLRSQLEVDIPQLPWIKINFRVFSKSSPIHNSS 102
           GGEFT   +  RK A       G N    R      +P+   I  ++     S P     
Sbjct: 29  GGEFTHRSLNFRKAASSRVPPTGPNTGTSRKFNFGTLPKGTLIPPSWPSKRTSRP----P 88

Query: 103 PPLSRNIYFGVYPKGSFIPPPAPSPIHNSSPPPSRNIYFGVYPKSSFIPSPSPSS-IHNS 162
           PP  +   FG  PK + IPP  PS   +  PPP     FG  PK + IP   PS    + 
Sbjct: 89  PPPPQPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPFNFGTLPKYTPIPPSGPSGRTSDP 148

Query: 163 YPPPSRNIYFGVYPKSSFIPPPGPS-LIHNSSPPPSKNIYFGVYSKGTFIPPLGPSPIHN 222
            PPP     FG  PK + IPP GPS    +  PPP     FG   K T IPP GPS   +
Sbjct: 149 PPPPPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLPKYTPIPPSGPSGRTS 208

Query: 223 SSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPNKF 255
             PPP     FG  PK + I P  PS   +S  PP+ F
Sbjct: 209 DPPPPPPPFNFGTLPKYTPILPSGPSGRTSSPPPPHPF 242

[Close]

BLAST of HG10017493 vs. NCBI nr
Match: XP_021800387.1 (formin-like protein 5, partial [Prunus avium])

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-13
Identity = 67/158 (42.41%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 95  HNSSPPLSRNIYFGVYPKGSFIPPPAPSP-IHNSSPPPSRNIYFGVYPKSSFIPSPSPSS 154
           H   P  +R   FG  PKG+ IPP  PS       PPP     FG  PK + IP   PS 
Sbjct: 10  HPPPPDSTRKFNFGTLPKGTLIPPSWPSKRTSRPPPPPPHPSNFGTLPKYTPIPPSGPSG 69

Query: 155 IHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPLGPSP 214
             +  PPP  N  FG  PK + IPP GPS   +  PPP  N  FG   K T IPP GPS 
Sbjct: 70  RTSDPPPPPFN--FGTLPKYTPIPPSGPSGRTSDPPPPPFN--FGTLPKYTPIPPSGPSG 129

Query: 215 IHNSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPP 252
             +  PPP  N  FG  PK + IPP  PS   +   PP
Sbjct: 130 RTSDPPPPPFN--FGTLPKYTPIPPSGPSGRTSDPPPP 161

[Close]

BLAST of HG10017493 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 58/168 (34.52%), Postives = 75/168 (44.64%), Query Frame = 0


Query: 91  SSPIHNSSPPLSRNIYFGVYPKGSFIPPP-APSPIHNSSPPPSRNIYFGVYPKSSFIPSP 150
           S P    SPP     Y+   P     PPP +P P H  SPPP    Y    P  + + SP
Sbjct: 544 SPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPH--SPPPPIYPYLSPPPPPTPVSSP 603

Query: 151 SPSSIHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPL 210
            P+ +++  PPP         P   + PPP P ++H SSPPP    Y          PP 
Sbjct: 604 PPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSS--------PP- 663

Query: 211 GPSPIHNSSPPPSKNIYFGVYPKGSFIPP------PCPSPIHNSSTPP 252
            P P++ SSPPP   +++   P     PP      P PSP+H SS PP
Sbjct: 664 -PPPVYYSSPPPPPPVHYSSPP-----PPEVHYHSPPPSPVHYSSPPP 694

[Close]

BLAST of HG10017493 vs. ExPASy Swiss-Prot
Match: O65375 (Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRX1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 59/185 (31.89%), Postives = 79/185 (42.70%), Query Frame = 0


Query: 88  FSKSSPIHNSSPPLSRNIYFGVYPKGSFIPPP------APSPIHNSSPPPSRNIYFGVYP 147
           +SK SP   + PP          P  S  PPP       P P   SSPPP   +Y    P
Sbjct: 446 YSKMSPSVRAYPP---------PPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPP 505

Query: 148 KSSFIPSPSPSSIHNSYPPPSRNIYFGVYPKSSFIPP------PGPSLIH----NSSPPP 207
                 SP P  +++S PPP   +Y    P     PP      P P +++      SPPP
Sbjct: 506 PPYVYSSPPPPYVYSSPPPP--YVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPP 565

Query: 208 SKNIYFGVYSKGTFIPPLGPSPIH----NSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNS 253
              +Y   Y   T  PP  PSP++     +SPPP   +Y   YP  ++ PPP PSP++  
Sbjct: 566 PSPVY---YPPVTQSPP-PPSPVYYPPVTNSPPPPSPVY---YPPVTYSPPP-PSPVYYP 611

[Close]

BLAST of HG10017493 vs. ExPASy Swiss-Prot
Match: O48809 (Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-04
Identity = 54/171 (31.58%), Postives = 70/171 (40.94%), Query Frame = 0


Query: 92  SPIHNSSPPLSRNIYFGVYPKGSFIPPP----APSPIHN-----SSPPPSRNIYFGVYPK 151
           SP   S PP    IY    P     PPP    +P P+ N      SPPP +  Y      
Sbjct: 494 SPPPPSPPP--PYIYSSPPPPSPSPPPPYIYSSPPPVVNCPPTTQSPPPPK--YEQTPSP 553

Query: 152 SSFIPSPSPSSI-HNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYS 211
             + PSPSP    + S PPP        Y   S  PPP P+     SPPP   +Y+   +
Sbjct: 554 REYYPSPSPPYYQYTSSPPPPT-----YYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVT 613

Query: 212 KGTFIPPLGPSPIHNSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPN 253
                PP+  +P+  S PPP   +Y+    +    PPP   P    S PP+
Sbjct: 614 ASPPPPPVYYTPVIQSPPPPP--VYYSPVTQSPPPPPPVYYPPVTQSPPPS 653

[Close]

BLAST of HG10017493 vs. ExPASy TrEMBL
Match: A0A1S2Y3N8 (proline-rich protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101510047 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-19
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 96  NSSPPLSRNIYFGVYPKGSFIPPPAPS--PIHNSSPPPSRNIYFGVYPKSSFIPS-PSPS 155
           + SPP  RN+ FG  PKG ++PP  PS    ++S PPP  N+ FGV  K   +PS PS  
Sbjct: 130 SDSPPPHRNMNFGRLPKG-YVPPSRPSKGSSYSSPPPPHTNLNFGVLLKGHVLPSGPSTR 189

Query: 156 SIHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPLGPS 215
              +  PPP  N++FG+ PK  ++PP GPS   + SPPP  N+ FGV  KG  +P  GPS
Sbjct: 190 FSDSPPPPPHTNLHFGMLPK-GYVPPSGPSTRFSDSPPPHTNLNFGVLLKGHVLPS-GPS 249

Query: 216 PIHNSS--PPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPNK 254
              + S  PPP  N++F + PKG ++PP  PS   + S PP +
Sbjct: 250 TRFSDSPPPPPHTNLHFSMLPKG-YVPPSGPSTRLSDSPPPRR 288

[Close]

BLAST of HG10017493 vs. ExPASy TrEMBL
Match: A0A1S3E4Y7 (leucine-rich repeat extensin-like protein 5 OS=Cicer arietinum OX=3827 GN=LOC105851949 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 78/202 (38.61%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 67  LRSQLEVDIPQLPWIKINFRVFSKSSPIHNSSP-PLSRNIYFGVYPKGSFIPPPAPSPIH 126
           L S + ++   LP  K +   F  S+    S P P  RN+ FG+ PKG  +PP  PS   
Sbjct: 98  LPSHINLNFGMLP--KGHIPPFGPSTGSSYSPPSPPRRNMNFGILPKG-HVPPSKPSTRS 157

Query: 127 NSS--PPPSRNIYFGVYPKSSFIPS------------PSPSSIHNSYPPPSRNIYFGVYP 186
           + S  PPP  N++FG+ PKS   PS            PS  S ++S PPP  N+ FGV P
Sbjct: 158 SDSPPPPPHTNLHFGMLPKSHVPPSEPTTKRLFSPSRPSKGSSYSSPPPPHTNLNFGVLP 217

Query: 187 KSSFIPPPGPSLIHNSSP--PPSKNIYFGVYSKGTFIPPLGPSPIHNSSPPPSKNIYFGV 246
           K   +PP  PS   + SP  P   N++F +  KG + PP GPS   + SPPP +NI FG 
Sbjct: 218 K-GHVPPSKPSTGSSDSPPLPHHTNLHFSMLPKG-YAPPSGPSTRLSDSPPPHRNINFGK 277

Query: 247 YPKGSFIPPPCPSPIHNSSTPP 252
            PK  ++PP  PS      +PP
Sbjct: 278 LPK-DYVPPSRPSNGSKYYSPP 293

[Close]

BLAST of HG10017493 vs. ExPASy TrEMBL
Match: A0A6J5XM21 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14
Identity = 78/218 (35.78%), Postives = 94/218 (43.12%), Query Frame = 0


Query: 43  GGEFTTNQIEARKLAEVH----GNNVDVLRSQLEVDIPQLPWIKINFRVFSKSSPIHNSS 102
           GGEFT   +  RK A       G N    R      +P+   I  ++     S P     
Sbjct: 29  GGEFTHRSLNFRKAASSRVPPTGPNTGTSRKFNFGTLPKGTLIPPSWPSKRTSRP----P 88

Query: 103 PPLSRNIYFGVYPKGSFIPPPAPSPIHNSSPPPSRNIYFGVYPKSSFIPSPSPSS-IHNS 162
           PP  +   FG  PK + IPP  PS   +  PPP     FG  PK + IP   PS    + 
Sbjct: 89  PPPPQPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPFNFGTLPKYTPIPPSGPSGRTSDP 148

Query: 163 YPPPSRNIYFGVYPKSSFIPPPGPS-LIHNSSPPPSKNIYFGVYSKGTFIPPLGPSPIHN 222
            PPP     FG  PK + IPP GPS    +  PPP     FG   K T IPP GPS   +
Sbjct: 149 PPPPPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLPKYTPIPPSGPSGRTS 208

Query: 223 SSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPNKF 255
             PPP     FG  PK + I P  PS   +S  PP+ F
Sbjct: 209 DPPPPPPPFNFGTLPKYTPILPSGPSGRTSSPPPPHPF 242

[Close]

BLAST of HG10017493 vs. ExPASy TrEMBL
Match: A0A6P5RC98 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-13
Identity = 67/158 (42.41%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 95  HNSSPPLSRNIYFGVYPKGSFIPPPAPSP-IHNSSPPPSRNIYFGVYPKSSFIPSPSPSS 154
           H   P  +R   FG  PKG+ IPP  PS       PPP     FG  PK + IP   PS 
Sbjct: 10  HPPPPDSTRKFNFGTLPKGTLIPPSWPSKRTSRPPPPPPHPSNFGTLPKYTPIPPSGPSG 69

Query: 155 IHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPLGPSP 214
             +  PPP  N  FG  PK + IPP GPS   +  PPP  N  FG   K T IPP GPS 
Sbjct: 70  RTSDPPPPPFN--FGTLPKYTPIPPSGPSGRTSDPPPPPFN--FGTLPKYTPIPPSGPSG 129

Query: 215 IHNSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPP 252
             +  PPP  N  FG  PK + IPP  PS   +   PP
Sbjct: 130 RTSDPPPPPFN--FGTLPKYTPIPPSGPSGRTSDPPPP 161

[Close]

BLAST of HG10017493 vs. ExPASy TrEMBL
Match: A0A6P5RDM4 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.8e-13
Identity = 66/151 (43.71%), Postives = 74/151 (49.01%), Query Frame = 0


Query: 102 SRNIYFGVYPKGSFIPPPAPSP-IHNSSPPPSRNIYFGVYPKSSFIPSPSPSSIHNSYPP 161
           SR   FG  PKG+ IPP  PS       PPP     FG  PK + IP   PS   +  PP
Sbjct: 58  SRKFNFGTLPKGTLIPPSWPSKRTSRPPPPPPHPSNFGTLPKYTPIPPSGPSGRTSDPPP 117

Query: 162 PSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPLGPSPIHNSSPP 221
           P  N  FG  PK + IPP GPS   +  PPP  N  FG   K T IPP GPS   +  PP
Sbjct: 118 PPFN--FGTLPKYTPIPPSGPSGRTSDPPPPPFN--FGTLPKYTPIPPSGPSGRTSDPPP 177

Query: 222 PSKNIYFGVYPKGSFIPPPCPSPIHNSSTPP 252
           P  N  FG  PK + IPP  PS   +   PP
Sbjct: 178 PPFN--FGTLPKYTPIPPSGPSGRTSDPPPP 202

[Close]

BLAST of HG10017493 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.4e-11
Identity = 58/168 (34.52%), Postives = 75/168 (44.64%), Query Frame = 0


Query: 91  SSPIHNSSPPLSRNIYFGVYPKGSFIPPP-APSPIHNSSPPPSRNIYFGVYPKSSFIPSP 150
           S P    SPP     Y+   P     PPP +P P H  SPPP    Y    P  + + SP
Sbjct: 544 SPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPH--SPPPPIYPYLSPPPPPTPVSSP 603

Query: 151 SPSSIHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPPL 210
            P+ +++  PPP         P   + PPP P ++H SSPPP    Y          PP 
Sbjct: 604 PPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSS--------PP- 663

Query: 211 GPSPIHNSSPPPSKNIYFGVYPKGSFIPP------PCPSPIHNSSTPP 252
            P P++ SSPPP   +++   P     PP      P PSP+H SS PP
Sbjct: 664 -PPPVYYSSPPPPPPVHYSSPP-----PPEVHYHSPPPSPVHYSSPPP 694

[Close]

BLAST of HG10017493 vs. TAIR 10
Match: AT1G12040.1 (leucine-rich repeat/extensin 1 )

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-07
Identity = 59/185 (31.89%), Postives = 79/185 (42.70%), Query Frame = 0


Query: 88  FSKSSPIHNSSPPLSRNIYFGVYPKGSFIPPP------APSPIHNSSPPPSRNIYFGVYP 147
           +SK SP   + PP          P  S  PPP       P P   SSPPP   +Y    P
Sbjct: 446 YSKMSPSVRAYPP---------PPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPP 505

Query: 148 KSSFIPSPSPSSIHNSYPPPSRNIYFGVYPKSSFIPP------PGPSLIH----NSSPPP 207
                 SP P  +++S PPP   +Y    P     PP      P P +++      SPPP
Sbjct: 506 PPYVYSSPPPPYVYSSPPPP--YVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPP 565

Query: 208 SKNIYFGVYSKGTFIPPLGPSPIH----NSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNS 253
              +Y   Y   T  PP  PSP++     +SPPP   +Y   YP  ++ PPP PSP++  
Sbjct: 566 PSPVY---YPPVTQSPP-PPSPVYYPPVTNSPPPPSPVY---YPPVTYSPPP-PSPVYYP 611

[Close]

BLAST of HG10017493 vs. TAIR 10
Match: AT4G08370.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 63/183 (34.43%), Postives = 84/183 (45.90%), Query Frame = 0


Query: 98  SPPLSRNIYFGVYPKGSFI--PPPAPSPIHNSSPPPSRNIYFG------VY---PKSSFI 157
           SPPL     +   P   ++   PP P  ++NS PPP   IY        VY   P   F+
Sbjct: 43  SPPLPSPYVYKSPPPSPYLYSSPPPPPYVYNSPPPPPPYIYNSPPRPPYVYKSPPPPPFV 102

Query: 158 PS--PSPSSIHNSYPPPSRNIYFGVYPKSSFI--PPPGPSLIHN---------SSPPPSK 217
            S  P P+ I+NS PPP   +Y  V P+ +FI   PP P  ++N         SSPPP  
Sbjct: 103 YSSPPPPTYIYNS-PPPPPYVYKSV-PRITFIYSSPPPPPYVYNSAPRIPFIYSSPPPPP 162

Query: 218 NIY------FGVYSKGTFIPPLGPSPIHNSSPPPSKNIYFGVYPKGSFI--PPPCPSPIH 249
            +Y        +YS     PP  P P   +SPPP   +Y  V P+  FI   PP P  ++
Sbjct: 163 YVYNSAPRVLFIYSS----PP--PPPYVYNSPPPPPYVYESV-PRIPFIYSSPPPPPYVY 216

[Close]

BLAST of HG10017493 vs. TAIR 10
Match: AT1G62440.1 (leucine-rich repeat/extensin 2 )

HSP 1 Score: 47.0 bits (110), Expect = 2.6e-05
Identity = 54/171 (31.58%), Postives = 70/171 (40.94%), Query Frame = 0


Query: 92  SPIHNSSPPLSRNIYFGVYPKGSFIPPP----APSPIHN-----SSPPPSRNIYFGVYPK 151
           SP   S PP    IY    P     PPP    +P P+ N      SPPP +  Y      
Sbjct: 534 SPPPPSPPP--PYIYSSPPPPSPSPPPPYIYSSPPPVVNCPPTTQSPPPPK--YEQTPSP 593

Query: 152 SSFIPSPSPSSI-HNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYS 211
             + PSPSP    + S PPP        Y   S  PPP P+     SPPP   +Y+   +
Sbjct: 594 REYYPSPSPPYYQYTSSPPPPT-----YYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVT 653

Query: 212 KGTFIPPLGPSPIHNSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPPN 253
                PP+  +P+  S PPP   +Y+    +    PPP   P    S PP+
Sbjct: 654 ASPPPPPVYYTPVIQSPPPPP--VYYSPVTQSPPPPPPVYYPPVTQSPPPS 693

[Close]

BLAST of HG10017493 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 60/163 (36.81%), Postives = 65/163 (39.88%), Query Frame = 0


Query: 89  SKSSPIHNSSPPLSRNIYFGVYPKGSFIPPPAPSPIHNSSPPPSRNIYFGVYPKSSFIPS 148
           S   PI   SPP  +       PK S   PP P P   SSPPPS         KS   P 
Sbjct: 123 SSPPPIPKKSPPPPKPSSPPPTPKKS---PPPPKP---SSPPPSPK-------KSPPPPK 182

Query: 149 PSPSSIHNSYPPPSRNIYFGVYPKSSFIPPPGPSLIHNSSPPPSKNIYFGVYSKGTFIPP 208
           PSPS    S PPP+        PK S   PP P     SSPPPS         K    P 
Sbjct: 183 PSPSPPKPSTPPPT--------PKKSPPSPPKP-----SSPPPSP-------KKSPPPPK 242

Query: 209 LGPSPIHNSSPPPSKNIYFGVYPKGSFIPPPCPSPIHNSSTPP 252
             PSP   S+PPP+        P     PPP PSP     +PP
Sbjct: 243 PSPSPPKPSTPPPTPK--KSPPPPKPSQPPPKPSPPRRKPSPP 250

The following BLAST results are available for this feature:

BLAST of HG10017493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004498022.1	5.2e-19	42.94	proline-rich protein 2-like [Cicer arietinum]	[more]
XP_012570444.1	3.1e-16	38.61	leucine-rich repeat extensin-like protein 5 [Cicer arietinum]	[more]
KAF3447487.1	5.9e-15	32.88	hypothetical protein FNV43_RR12673 [Rhamnella rubrinervis]	[more]
CAB4314850.1	3.8e-14	35.78	unnamed protein product [Prunus armeniaca]	[more]
XP_021800387.1	4.2e-13	42.41	formin-like protein 5, partial [Prunus avium]	[more]

BLAST of HG10017493 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T0K5	1.3e-09	34.52	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
O65375	1.2e-05	31.89	Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
O48809	3.7e-04	31.58	Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of HG10017493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S2Y3N8	2.5e-19	42.94	proline-rich protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101510047 PE=4 SV=1	[more]
A0A1S3E4Y7	1.5e-16	38.61	leucine-rich repeat extensin-like protein 5 OS=Cicer arietinum OX=3827 GN=LOC105...	[more]
A0A6J5XM21	1.9e-14	35.78	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=...	[more]
A0A6P5RC98	2.0e-13	42.41	formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1	[more]
A0A6P5RDM4	7.8e-13	43.71	formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1	[more]

BLAST of HG10017493 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13340.1	9.4e-11	34.52	Leucine-rich repeat (LRR) family protein	[more]
AT1G12040.1	8.2e-07	31.89	leucine-rich repeat/extensin 1	[more]
AT4G08370.1	2.4e-06	34.43	Proline-rich extensin-like family protein	[more]
AT1G62440.1	2.6e-05	31.58	leucine-rich repeat/extensin 2	[more]
AT1G44191.1	1.0e-04	36.81	ECA1 gametogenesis related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 77..252
None	No IPR available	PANTHER	PTHR33599:SF13	FORMIN-LIKE PROTEIN 20	coord: 77..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017493.1	HG10017493.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010227	floral organ abscission