HG10017466 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017466
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	binding partner of ACD11 1-like
Location	Chr03: 14536591 .. 14542124 (-)
RNA-Seq Expression	HG10017466
Synteny	HG10017466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTAACAAATCCCTCAATTTCCACTACTTTCTTTCAATTCTTGCTCTCTGATTTCGGTAATCAACTTCAATTTTCGCTTGTTTTTTTATCTTGATTTCTTCTGCTCGGTCTCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAACACATTGAGATTCAATGGTAGGTGATTTACTCTGAACAGAATTGCAAAAAGTGGTAAAAAGAAGATGTGCATGATTGATTGATTATGATTCTGATTCCCTTTTCTATGCGGCTGATTTTGTTTTAGGTTTCCTACTGTTTGGCTTCCGAGAAAAAGTAGTTAGCAATTAAGCATGAGGGTTGTAATTGTTATAACTTATAGCTTAGAAGTAATTAAGGTATCTTTCAGTTTTGGCAAAATATTAGAAGTGTATATGTTCCACATCGGAAAGATTCAAGGAATTGATGGGTTCCAAGTACTATAAAACGAGTAATGCCTTTAGTTTGAAATCGTCCAAACACTTTAAACTTGAGTGTCGCTTAAAGGGTGTGAGTAGTATAAAAATTTTATTGGTTTGAAATCGTTCAAACACTTTAAGCTTGAGTGTGAACTTAAATGGCGTGAGTAGGATGAAAATTTTGAGAGAGTATTCTAGTAATTGGGATCGGGTAGAGAATTATTTTGTGTGATTGTAACATATTTTCACAACGTGGATTTCTTTCTGGTGGGTCGTGGTTTTATGTCCAGTTTAGAGTCATCCATGTTAATTCTTTTGTTCTCAATTTTATTGCTTTCTTTTTATTTTTTTTGTTATTTTTCTACTCATTCATGCAGTAGTAGTGAGAGGTTTTTCCCAACTTCCCTCTTGAGAAGATAAGAAGGGTCCGATGGATTGCAACTTATTATTATCTTTACTTTACCATTAGCATGCCATGTAGAATAAGCAATTGTTGGATTGTTATTCTAATTTATTCTTGTTGGTGCAGTGAACAGGGGCAATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGTATTTCATTATCTCGATTCTCTTTCATATCCATGAAGTTAGTTCTTGAAATTGCTGGATTGTTATCGGTATTGAACTTGTGTTTTTACAATGAATGTCAAAGATCGTCAAGTTGAAGTTTGGTTCATGTGGGTCTACATTTGGCTGTAAACACCTTCTTATTTAAGCTATGTTTGTTCTTAGTGTCCAATTAGTTCTTTATCCTCTTTACTTTTCTTTCGTTCATTTTCTTGCCATTAATTTTGATTGAATTGAAAAGTGATGGATGAGTAGAATTTTGGTTTTTTTTACATTTTTCAGAAGAAGATTTTCTACTCGTAACCTCAAACGTAACAGGAGAAACTTCTTTATAGCTGTAATATACGATCTTTTAGTAGAAGCTACCCTGTTTTTGCATTTTGTCTTTCTGATCACCACACTACTCTTTCTAATAATAATAAAAAAACCAGAGATAAGTTATCAAACTAATGTTAAAAGTGGCATGCTTTTTTTGGTAATTTTCCTAGCATTAGTTATAAGTCCATAATTTTGGAGCAAAAAACAACTCAAGGAAAGCAAGGATGGAAAGAGAAAAAAAAGAAAAAGAAAAAGAAAAAAGAGATGAGAGTAATGGTTGAACTTGAAAGTGAAATTATTTAACTGAACTTTATGAACAAACGTCTGCCTTGCTTTTACTTTTTGTTACGAATTTGCATTAGTGAGAAGTAGTACTAAATGGACACGTTTCTAGAAAAAGAAGGAAGCTAATACCTTTTCTTTGCATGATCATTTCTTTACGCAATAATGGAATAATTTGATTTTTTCATCATGCAATACTGGAAATATACTTTTTCTTCTTCATATCTGGCTGATGCCGTAAGCTACTATAAACAATTTCTACTATTTATTTTTTGTTATTTAGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTGTGTTTGAATATGTTTCGAGGCCGGTCTAGCTGTTTATTCTATATTCAATATTTTAAATTTACTATGTTTGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAGCATTGAGGTAAATGTGTTGACCCCACTCTATGAATATCAAGTAGCATTTGAGTAGCATTGCTTTCACTTCGATGTACTATTAATGAAAAACCAAGGCTGGGGAATTTCATCAAAAGGAAAAGTTTAGGACATTGTTTCTTGTTTTTCTATCGTCAGATTTTCTTAAATTGACGTAGATGGATGAAAAGTAAAACCTCCATTTAATGCATGTCGTCATGAACCTCACTATTGGGAAAAGCCACTTACTACTATGATAGAAATAATTAGAAAAATAACAGAGAAATTAAAAGAAAGCAATAACACTGGAAAGACAAAAATTAACATGGAAAAATTCCAAACTGTAGAAAAAATCACGGACCAGAAAATTTCACTATGTGAAAAATTGTTACAATCATACAAAATAATTTTCTCATACCCTAATTACAAGAGCACTCTCTCAAAGCATTATACCACTCACAAAACTGAGCCAGTATACCAAGCTTAAAGTGCTTCCAATTCGGATAATTAGAAACTAAAAGCATGGTCTTTTTTTATAGTGCTTGGAGCTCATCACTTTCTTCAACCTTTTGGGACAACTACACTTCTAATATTTTGCCAAAACTCAACACTTACTACCCTTACTAAAACTATGGTGAAGAACTGGTGAAATAACAGTTTCACACTCTGAGTTTTCATATGGATCTTGATTTCCTTGCTTTATTTAACTATACAAGTGGATGATGAGTCATCTTTTCTTTGTTCCTACCTTAAATCTTTTTGTCTTTACAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACAGTACTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATAACAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAATCAAGCAAGTATGAATCATCATTCTTAAGCAACTTTTACTTCCCTTCCTCCTGCTATCTTCAAATTTTAGAACTTGAATATTCTCCGCTCCTAGCAAGGAAGCAGAAAATTAGGGACATTTGGAGCGTTGAATTGATTATTATAATCGATAATTATTATAGTATGTGGGTTATAATAGTCTGTAAGTTATAATAGTTTGTGTTCAGGGTGCAAACTATTTTAGTTTGGGCAACAATAGTCTGTGTTTGAGATGCAGACTTTTTTAGTCTGAGTAAGAAAGCAAACACTCTAACAAAGAGAGATTTGAAATAGTAATACTGTAGTTAATTGTAGGTTATAATAGTTGGAAATACCAATTATTGGAATTGGAGCCTCACAACATGTAGTGGGCTAAAATAGTCCACTCCAGCCCACTCCAACCATTTGAAGTTGGGGGCCCAAACAATCTTTTAGGGGGTGTTTGAAGCGCTGAGTTGGTTATTATAGTCAATGGTTATTATAGTTTGTGGGTTATAATAGTCTGTAAATTATAATAGTCTATGTTTTGGGGGCAGACTATTTTAGTTTGGGTAAAGAAAAGTAAACACGGTAAGAAAGAGGGAGAGAGAAGATGAGTAGGAAATAGTAAATGCGGTAATAAAGAATGATTTGAAACAGTAATACTTAATTGTAGGTTATAATAGTTGGAAACACCAACTATTATAATTAGAGCTCCAAACGTGGAGTGAGTTATAATAGTCCATTCCACTCACTTGAAGTTGGGGTCCAAATATCCCATAATTTTCTGGAACAGCTCCCAAACAACTTCCTAGTGTTTCAACTTCTTGAGAACTTTAGACCGATATAGTTGTATATTTCTATTATCCAAATAAATTACAATGGTTCTACTGTTCATTTTAAATAAAGCAGTTATGACAATAGACGGAAGTGAATTAATTGTTTCACTCTATCTTGGCGTTGAACAGGTACGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGGACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAACTTAACTTCCAAGGTGCGTTTATGAAACCCTTTTTTATGGCGACATAAAAGTCTAGGATTCTTCGAAAAATCACTTGCTATGATTAATTAAAATCACTTTTGTCATGTTTAAAATCACTCCGGAACACACTTTTAATCACTCAAAATTAATTCAATGTTTGATTATACACTTTTAATCACTCAAAATTAATTCAATGTTTGATTATACACTTTTAAACAAGCAATTTTGGAGTTATTTAAACAATGACAAAAGTGATTTTGACAATTTTAAAATTATTTCTAAACATGATAAAAGAACAATCTCAGGGACAACAGTTTTTATAATTATTTACTCAAATATATTTTTCTAGTTTTTTCACCTATCTTAAAGAAACACTTGAAAATCTAGTCAAATTCTAAGACGACAAAATACACTTTTGGTCCCTGAAGTTTGAGATTGGTGTCTATTTGGTCCTTGAGGTTTTAAAAGTGATGCTTTAGGGGCCGTTTGGCCCTAACGTCTTAAGTTGGTGTAAACAACTCAACTTCAATAGTAAACACTATTGAAATTTGCACATTTATCGAGTAACTTTATCTTTCCTTCTCTTTCTACTTTTTACATTTATCGAAGAACTTCATATTACCCTCTATTTCTACTTTTCACATTTATCGAGTGATTACTTCTCCTCTTTCTTTACTCTTTCACGTTTATCGAAAAACTCCATTTTACAACTCTACACCCCAAACACAAACTTACTAACTGTAACATAACTCTAGACTCATTAACTCTAATAAGTGGGTCAAATGGCCCCTTAGTCCCTAAGGTTTGAGTAATGGTTCTAAATGGTCCTAAGGTTTTAAAAGTGATATTTTTAGACACTAACCCCAAATTTCAGAGTTCAAAAGTATATTTTACCAAAAAAAAAAAAAATACTTTTTGAAAACTACTTTTTGGTTTTCAAAACTAGTTTGGGTTTTTAAAACACGAGTAGGAAAGTGGTAACAAAGCATAGAAACTTATGAGTGGTAGTAGTGTTTATCGACTTAATTAATCGATTTAATCATGTAGTTTACCTTCTACACCAGTTTTTCTGTGAAATTCTCTCTAGTTGAAATGAAACTGTAACTGACCTTTATTTTTCAAACATGCAGGAACCCTCAGTTGTTGCCTAA

mRNA sequence

ATGCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAACACATTGAGATTCAATGTGAACAGGGGCAATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACAGTACTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATAACAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAATCAAGCAAGTACGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGGACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAACTTAACTTCCAAGGAACCCTCAGTTGTTGCCTAA

Coding sequence (CDS)

ATGCAGACTCGGACGGTTCAAGTTAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAACACATTGAGATTCAATGTGAACAGGGGCAATCCAAGACTGCATTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTAGATCAGATTGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACTCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACAGTACTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTCGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTGACAGTTGGGATAACAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAATCTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGATCTGCTGTCAAATCAAGCAAGTACGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGGTCGCAAAAGCAGGGCAGGCAGCAGGGACAAAAACCAGAGAGAAGTTCCATTTGGCTATGTCAAACTTAACTTCCAAGGAACCCTCAGTTGTTGCCTAA

Protein sequence

MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA

Homology

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BLAST of HG10017466 vs. NCBI nr
Match: XP_038881171.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 487.6 bits (1254), Expect = 6.7e-134
Identity = 260/268 (97.01%), Postives = 263/268 (98.13%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVDQIVSIS AENHVPRREMQEVRVVDNAACLTPTENNFPS EDSASQPSSGKMYV
Sbjct: 64  SGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTENNFPSTEDSASQPSSGKMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTA AAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNLTSKE SVVA
Sbjct: 244 GQAAGTKTREKFHLAMSNLTSKESSVVA 271

[Close]

BLAST of HG10017466 vs. NCBI nr
Match: XP_004151849.1 (binding partner of ACD11 1 [Cucumis sativus])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 256/268 (95.52%), Postives = 262/268 (97.76%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTENN PSIEDSASQPSSGKMYV
Sbjct: 64  SGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNL SKEP VVA
Sbjct: 244 GQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of HG10017466 vs. NCBI nr
Match: KAE8652335.1 (hypothetical protein Csa_022102 [Cucumis sativus])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 256/268 (95.52%), Postives = 262/268 (97.76%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLL
Sbjct: 150 QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLL 209

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTENN PSIEDSASQPSSGKMYV
Sbjct: 210 SGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYV 269

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 270 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 329

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKA
Sbjct: 330 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKA 389

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNL SKEP VVA
Sbjct: 390 GQAAGTKTREKFHLAMSNLISKEPPVVA 417

[Close]

BLAST of HG10017466 vs. NCBI nr
Match: XP_008462804.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa] >TYK00958.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 479.2 bits (1232), Expect = 2.4e-131
Identity = 254/268 (94.78%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTENN PS EDSASQPSSGKMYV
Sbjct: 64  SGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGKMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNL SKEP VVA
Sbjct: 244 GQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of HG10017466 vs. NCBI nr
Match: XP_038881170.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130
Identity = 260/285 (91.23%), Postives = 263/285 (92.28%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 63

Query: 62  -----------------SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNF 121
                            SGATIVDQIVSIS AENHVPRREMQEVRVVDNAACLTPTENNF
Sbjct: 64  SVFHYLDSLSYPRSQLSSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTENNF 123

Query: 122 PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVL 181
           PS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVL
Sbjct: 124 PSTEDSASQPSSGKMYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVL 183

Query: 182 SFDRRVGLTEKLTVGITVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYV 241
           SFDRRVGLTEKLTVGI+VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVK+SKYV
Sbjct: 184 SFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYV 243

Query: 242 TASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           TA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE SVVA
Sbjct: 244 TAGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKESSVVA 288

[Close]

BLAST of HG10017466 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46
Identity = 107/251 (42.63%), Postives = 161/251 (64.14%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LL
Sbjct: 4   QVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETAVLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGA+I DQ V I  A N+ P                       P+   + +Q S  +  V
Sbjct: 64  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
            +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G +
Sbjct: 124 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           +VNEK+K+VDQN  V+++T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A
Sbjct: 184 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 228

Query: 242 GQAAGTKTREK 253
               G KT+EK
Sbjct: 244 AGEVGQKTKEK 228

[Close]

BLAST of HG10017466 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04
Identity = 53/248 (21.37%), Postives = 103/248 (41.53%), Query Frame = 0


Query: 6   VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLSGAT 65
           V V ++S   TE++I +FFSF G++ +I  + + G+++TA + F  P A + ALLL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTE-KSGETQTAKIQFERPSATKTALLLQDAL 64

Query: 66  IVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNRAQ 125
           +    + I+                 ++    + T+      + +A Q    +       
Sbjct: 65  LGQNKIQITS----------------EDGGAASTTDQGGAGGDQAARQEDKPR------S 124

Query: 126 EVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITVVNE 185
            +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE
Sbjct: 125 AIISELLSRGYHLSDVTLEKSIQLDQSYGVSSKFK----------GILESALSGVRSVNE 184

Query: 186 KVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAGQAA 245
           +    ++   V +K     FA   KLN T S V +  +     A           AG +A
Sbjct: 185 RYHVTEKANEVDNK-----FAISDKLNRTSSLVSTYFHKALETA-----------AGTSA 203

Query: 246 GTKTREKF 254
           G K +  +
Sbjct: 245 GQKVQNAY 203

[Close]

BLAST of HG10017466 vs. ExPASy TrEMBL
Match: A0A0A0LNE8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.1e-133
Identity = 256/268 (95.52%), Postives = 262/268 (97.76%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTENN PSIEDSASQPSSGKMYV
Sbjct: 64  SGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNL SKEP VVA
Sbjct: 244 GQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of HG10017466 vs. ExPASy TrEMBL
Match: A0A5D3BPG7 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001350 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 254/268 (94.78%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTENN PS EDSASQPSSGKMYV
Sbjct: 64  SGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGKMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNL SKEP VVA
Sbjct: 244 GQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of HG10017466 vs. ExPASy TrEMBL
Match: A0A1S3CIA3 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 254/268 (94.78%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLL
Sbjct: 4   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTENN PS EDSASQPSSGKMYV
Sbjct: 64  SGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGKMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTASAAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNL SKEP VVA
Sbjct: 244 GQAAGTKTREKFHLAMSNLISKEPPVVA 271

[Close]

BLAST of HG10017466 vs. ExPASy TrEMBL
Match: A0A6J1DJX5 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111021797 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 250/268 (93.28%), Postives = 258/268 (96.27%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           +TRTVQV HVSDLATEREIHEFFSFSGEIEHIEIQCE GQSKTAFVTFRDPKALEIALLL
Sbjct: 4   RTRTVQVNHVSDLATEREIHEFFSFSGEIEHIEIQCEHGQSKTAFVTFRDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVDQIVSISPAENHVP+RE+QEVRVVDNAACLT TENN PS EDSASQPS G+MYV
Sbjct: 64  SGATIVDQIVSISPAENHVPKREIQEVRVVDNAACLT-TENNLPSNEDSASQPSGGRMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHRLTASAS KVLSFDRRVGLTEKLTVGI+
Sbjct: 124 NRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHRLTASASEKVLSFDRRVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVK+SKYVTA AAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAG+KTREKFHLAMSNLTSKEP VVA
Sbjct: 244 GQAAGSKTREKFHLAMSNLTSKEPPVVA 270

[Close]

BLAST of HG10017466 vs. ExPASy TrEMBL
Match: A0A6J1IKN1 (binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.5e-128
Identity = 247/268 (92.16%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           QTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTFRDPKALEIALLL
Sbjct: 4   QTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTENNFPSIEDSASQPSSG+MYV
Sbjct: 64  SGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGRMYV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
           NRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTVGI+
Sbjct: 124 NRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGIS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           VVNEKVKSVDQ LHVSDKTMAAIFAAERK+NDTGSAVK+SKYVT+ AAWLNGAFGKVAKA
Sbjct: 184 VVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKA 243

Query: 242 GQAAGTKTREKFHLAMSNLTSKEPSVVA 270
           GQAAGTKTREKFHLAMSNLTSK   V A
Sbjct: 244 GQAAGTKTREKFHLAMSNLTSKGHPVAA 271

[Close]

BLAST of HG10017466 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 355.5 bits (911), Expect = 3.7e-98
Identity = 192/265 (72.45%), Postives = 228/265 (86.04%), Query Frame = 0


Query: 3   TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLLS 62
           TR+VQV +VSDLATEREIHEFFSFSG+IEHIEIQ E GQS+ AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 63  GATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVN 122
           GATIVDQIV+I+ AEN+V RRE QEVR++DNA  L   E+   + +   +   + + YV+
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQES---TTQTKTNMDGNSRAYVS 123

Query: 123 RAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGITV 182
           +AQ+VVATVLAKGSA+GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGI+ 
Sbjct: 124 KAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISA 183

Query: 183 VNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKAG 242
           VNEKVKSVDQ L VSDKTMAAIFAAERKLNDTGSAVKSS+YVTA AAW +GAF KVA+ G
Sbjct: 184 VNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVG 243

Query: 243 QAAGTKTREKFHLAMSNLTSKEPSV 268
           Q AG+KT+EKF+LA+SN++SK+  +
Sbjct: 244 QVAGSKTKEKFNLAVSNMSSKDTPI 265

[Close]

BLAST of HG10017466 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 202.6 bits (514), Expect = 4.0e-52
Identity = 116/256 (45.31%), Postives = 168/256 (65.62%), Query Frame = 0


Query: 1   MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALL 60
           M   TV+V +VS  AT+R++ EFFSFSG+I ++E Q E  ++K A+VTF+D +  E A+L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMY 120
           LSGATIVD  V +S A ++    E          A L P        +DS   P +G   
Sbjct: 61  LSGATIVDSSVIVSMAPDYQLSPEA--------LASLEP--------KDSNKSPKAGDSV 120

Query: 121 VNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGI 180
           + +A++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G 
Sbjct: 121 LRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGT 180

Query: 181 TVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAK 240
            VV EKV+ VDQ   VS+KT +AI AAE+ +++ GSA+  ++YV   A W+ GAF KVAK
Sbjct: 181 VVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAK 240

Query: 241 AGQAAGTKTREKFHLA 257
           A +  G K +EK  +A
Sbjct: 241 AAEEVGQKAKEKVGMA 240

[Close]

BLAST of HG10017466 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-49
Identity = 111/268 (41.42%), Postives = 175/268 (65.30%), Query Frame = 0


Query: 1   MQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALL 60
           M   TV+V +VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF+D +  E A+L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKM 120
           L+G+TIVD  V+++ + ++ +P   +  +  +  +      +++ P+ ED +        
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPPDALASIESLKES-----NKSSSPTREDVS-------- 120

Query: 121 YVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVG 180
              +A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G
Sbjct: 121 VFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTG 180

Query: 181 ITVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVA 240
            TVV+EKVK VDQ   V++KT +AI AAE+ +++ GSA+  ++YV   A W+ GAF +V+
Sbjct: 181 TTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVS 240

Query: 241 KAGQAAGTKTREKFHLAMSNLTSKEPSV 268
           KA +  G K +EK  LA      K+  V
Sbjct: 241 KAAEEVGQKAKEKVGLAEEEEEEKKKVV 255

[Close]

BLAST of HG10017466 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 188.7 bits (478), Expect = 6.0e-48
Identity = 108/251 (43.03%), Postives = 160/251 (63.75%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTF++ +  E A+LL
Sbjct: 4   QVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAVLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGA+I DQ V I  A N+ P                       P+   + +Q S  +  V
Sbjct: 64  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
            +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G +
Sbjct: 124 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           +VNEK+K+VDQN  V+++T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A
Sbjct: 184 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 229

Query: 242 GQAAGTKTREK 253
               G KT+EK
Sbjct: 244 AGEVGQKTKEK 229

[Close]

BLAST of HG10017466 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 188.3 bits (477), Expect = 7.8e-48
Identity = 107/251 (42.63%), Postives = 161/251 (64.14%), Query Frame = 0


Query: 2   QTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIALLL 61
           Q R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF++ +  E A+LL
Sbjct: 4   QVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNE---HSAYVTFKETQGAETAVLL 63

Query: 62  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 121
           SGA+I DQ V I  A N+ P                       P+   + +Q S  +  V
Sbjct: 64  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 123

Query: 122 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIT 181
            +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G +
Sbjct: 124 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 183

Query: 182 VVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKSSKYVTASAAWLNGAFGKVAKA 241
           +VNEK+K+VDQN  V+++T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A
Sbjct: 184 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 228

Query: 242 GQAAGTKTREK 253
               G KT+EK
Sbjct: 244 AGEVGQKTKEK 228

The following BLAST results are available for this feature:

BLAST of HG10017466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881171.1	6.7e-134	97.01	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_004151849.1	1.3e-132	95.52	binding partner of ACD11 1 [Cucumis sativus]	[more]
KAE8652335.1	1.3e-132	95.52	hypothetical protein Csa_022102 [Cucumis sativus]	[more]
XP_008462804.1	2.4e-131	94.78	PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding ...	[more]
XP_038881170.1	1.2e-130	91.23	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]

BLAST of HG10017466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.1e-46	42.63	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	1.8e-04	21.37	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of HG10017466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNE8	6.1e-133	95.52	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV...	[more]
A0A5D3BPG7	1.1e-131	94.78	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIA3	1.1e-131	94.78	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=...	[more]
A0A6J1DJX5	1.6e-128	93.28	binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111021797 PE=4 S...	[more]
A0A6J1IKN1	4.5e-128	92.16	binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1	[more]

BLAST of HG10017466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	3.7e-98	72.45	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	4.0e-52	45.31	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	1.1e-49	41.42	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	6.0e-48	43.03	binding partner of acd11 1	[more]
AT5G16840.1	7.8e-48	42.63	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 2.4E-7 score: 40.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..66 e-value: 1.1E-5 score: 25.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 10.360188
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..88 e-value: 7.8E-10 score: 40.8
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 1..268
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..268
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017466.1	HG10017466.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding