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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGGTGGTTGCCGAAGCTGGCTATCGGAGGTGGTCGCTGGAGTTGGTTGCAACAATGGTGGTTAATGTTGCCGGAGTTGGCTGCATGTGGTGGTTGCCGGAGTTGGTCGTCGGAGGTGGTTGCCGGAGTTGGCCGTCGGAGGTGGTCACCGGAGTTGGCCGTCGGAGGTGGTCACCGGAGTTGGCCGTCGCATGTAGTTGTCGAAGTTGGTTGTCGGAGGTGGTCACTGGTGATGTGA mRNA sequence ATGTGGTGGTTGCCGAAGCTGGCTATCGGAGGTGGTCGCTGGAGTTGGTTGCAACAATGGTGGTTAATGTTGCCGGAGTTGGCTGCATGTGGTGGTTGCCGGAGTTGGTCGTCGGAGGTGGTTGCCGGAGTTGGCCGTCGGAGGTGGTCACCGGAGTTGGCCGTCGGAGGTGGTCACCGGAGTTGGCCGTCGCATGTAGTTGTCGAAGTTGGTTGTCGGAGGTGGTCACTGGTGATGTGA Coding sequence (CDS) ATGTGGTGGTTGCCGAAGCTGGCTATCGGAGGTGGTCGCTGGAGTTGGTTGCAACAATGGTGGTTAATGTTGCCGGAGTTGGCTGCATGTGGTGGTTGCCGGAGTTGGTCGTCGGAGGTGGTTGCCGGAGTTGGCCGTCGGAGGTGGTCACCGGAGTTGGCCGTCGGAGGTGGTCACCGGAGTTGGCCGTCGCATGTAGTTGTCGAAGTTGGTTGTCGGAGGTGGTCACTGGTGATGTGA Protein sequence MWWLPKLAIGGGRWSWLQQWWLMLPELAACGGCRSWSSEVVAGVGRRRWSPELAVGGGHRSWPSHVVVEVGCRRWSLVM
Homology
BLAST of HG10017429 vs. NCBI nr
Match: XP_010501877.1 (PREDICTED: uncharacterized protein LOC104779199 [Camelina sativa] >XP_010501878.1 PREDICTED: uncharacterized protein LOC104779200 [Camelina sativa]) HSP 1 Score: 68.9 bits (167), Expect = 2.2e-08 Identity = 42/91 (46.15%), Postives = 46/91 (50.55%), Query Frame = 0 Query: 4 LPKLAIGGGRWSWLQQWWLMLPELAACGGCRSWSSEVVAGVGRRRWSPELAVGGG----H 63 LP+L GGGR SW P + A G RSWS +VAGVGRRRWSPEL G G H Sbjct: 25 LPELVAGGGRRSW-------SPAVVAGVGRRSWSPAMVAGVGRRRWSPELVAGDGRRRCH 84
Query: 64 RSWPSHVV-------------VEVGCRRWSL 78 R W +V VG RRWSL Sbjct: 85 RRWSPELVAGDDRRSLSPAMIAGVGRRRWSL 108
BLAST of HG10017429 vs. TAIR 10
Match: AT5G42635.1 (glycine-rich protein ) HSP 1 Score: 45.8 bits (107), Expect = 1.8e-05 Identity = 31/77 (40.26%), Postives = 37/77 (48.05%), Query Frame = 0 Query: 7 LAIGGGRWSWLQQWWLMLPELAACGGCRSWSSEVVAGVG--RRRWSPELAV--GGGHRSW 66 +A GGG W WW + + GG V GVG R RW ELAV GGG R W Sbjct: 35 VAGGGGGRRW---WWPAVAVVVVTGGGGGGRRVTVTGVGGDRNRWWSELAVMAGGGGRQW 94
Query: 67 PSHVVVEVGCRRWSLVM 80 VV G +RW L++ Sbjct: 95 WPAVVTGGGGQRWWLLL 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_010501877.1 | 2.2e-08 | 46.15 | PREDICTED: uncharacterized protein LOC104779199 [Camelina sativa] >XP_010501878.... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
AT5G42635.1 | 1.8e-05 | 40.26 | glycine-rich protein | [more] |
Relationships
The following mRNA feature(s) are a part of this gene:
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