HG10017386 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017386
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cytochrome b6-f complex subunit 4
Location	Chr03: 13932509 .. 13932811 (+)
RNA-Seq Expression	HG10017386
Synteny	HG10017386

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCGTTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACCGTCTTTTTGATTGGTACCGCAGTAGCCCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGTCTTTTTTAA

mRNA sequence

ATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCGTTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACCGTCTTTTTGATTGGTACCGCAGTAGCCCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGTCTTTTTTAA

Coding sequence (CDS)

ATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCGTTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACCGTCTTTTTGATTGGTACCGCAGTAGCCCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGTCTTTTTTAA

Protein sequence

MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Homology

[Close]

BLAST of HG10017386 vs. NCBI nr
Match: YP_009461758.1 (cytochrome b/f [Chionanthus parkinsonii] >YP_009547847.1 PetD [Petunia x hybrida] >YP_009695105.1 PetD [Philadelphus calvescens] >YP_009698906.1 PetD [Carpenteria californica] >YP_009752781.1 cytochrome b6/f subunit IV [Cyclantheropsis parviflora] >YP_009915444.1 cytochrome b6/f complex subunit IV [Calibrachoa hybrid cultivar] >YP_009930664.1 cytochrome b6/f complex subunit IV [Petunia exserta] >QHN53524.1 cytochrome b6/f complex subunit IV [Oreocnide frutescens] >QWW33861.1 cytochrome b6/f complex subunit IV [Thermopsis alpina] >QWW33945.1 cytochrome b6/f complex subunit IV [Thermopsis lanceolata] >QWW34029.1 cytochrome b6/f complex subunit IV [Thermopsis turkestanica] >AUG33683.1 PetD [Petunia x hybrida])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. NCBI nr
Match: QWQ51329.1 (cytochrome b6-f complex subunit IV [Dickinsia hydrocotyloides])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 75  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 134

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 135 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 174

[Close]

BLAST of HG10017386 vs. NCBI nr
Match: YP_009627422.1 (cytochrome b6/f complex subunit IV [Tinospora cordifolia] >QCC70872.1 cytochrome b6/f complex subunit IV [Tinospora cordifolia] >QJF59506.1 cytochrome b6/f complex subunit IV [Tinospora sinensis])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 75  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 134

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 135 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 174

[Close]

BLAST of HG10017386 vs. NCBI nr
Match: QYF07576.1 (cytochrome b6/f complex subunit IV [Prinsepia utilis])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 62  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 121

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 122 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 161

[Close]

BLAST of HG10017386 vs. NCBI nr
Match: ADD31066.1 (cytochrome b6/f complex subunit IV protein [Ficus sp. Moore 315])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy Swiss-Prot
Match: Q7FNS2 (Cytochrome b6-f complex subunit 4 OS=Atropa belladonna OX=33113 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.7e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy Swiss-Prot
Match: Q4VZK4 (Cytochrome b6-f complex subunit 4 OS=Cucumis sativus OX=3659 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.7e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy Swiss-Prot
Match: Q2L939 (Cytochrome b6-f complex subunit 4 OS=Gossypium hirsutum OX=3635 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.7e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy Swiss-Prot
Match: Q1KXS8 (Cytochrome b6-f complex subunit 4 OS=Helianthus annuus OX=4232 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.7e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy Swiss-Prot
Match: Q06RA1 (Cytochrome b6-f complex subunit 4 OS=Jasminum nudiflorum OX=126431 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.7e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy TrEMBL
Match: A0A7H1KFU8 (Cytochrome b6-f complex subunit 4 OS=Meconopsis henrici OX=248836 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy TrEMBL
Match: A0A292G397 (Cytochrome b6-f complex subunit 4 OS=Vitis x champinii OX=884146 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy TrEMBL
Match: A0A1U9YE37 (Cytochrome b6-f complex subunit 4 OS=Rehmannia glutinosa OX=99300 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy TrEMBL
Match: A0A6B9TT79 (Cytochrome b6-f complex subunit 4 OS=Gonostegia hirta OX=648870 GN=petD PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. ExPASy TrEMBL
Match: A0A1U8LXQ6 (Cytochrome b OS=Gossypium hirsutum OX=3635 GN=LOC107931915 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 866 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 925

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Sbjct: 926 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 965

[Close]

BLAST of HG10017386 vs. TAIR 10
Match: ATCG00730.1 (photosynthetic electron transfer D )

HSP 1 Score: 199.9 bits (507), Expect = 9.6e-52
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 60
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 61  QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF 101
           QNPFRRPVATTVFLIGTA ALWLGIGATLPIDKSLTLGLF
Sbjct: 121 QNPFRRPVATTVFLIGTAAALWLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of HG10017386 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-09
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 5   PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPF 64
           PA+P +TP  I+PEWYF P+  ILR++P+K  GV  +  V   LL +PF +++    + F
Sbjct: 265 PANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSF 324

Query: 65  RRPVATTVFLIGTAVALWLGIGATLPID 93
            RP+   +F +  A  L LG     P++
Sbjct: 325 -RPIHQGMFWLLLADCLLLGWIGCQPVE 351

[Close]

BLAST of HG10017386 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 58.5 bits (140), Expect = 3.5e-09
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 5   PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPF 64
           PA+P +TP  I+PEWYF P+  ILR++P+K  GV  +  V   LL +PF +++    + F
Sbjct: 265 PANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSF 324

Query: 65  RRPVATTVFLIGTAVALWLGIGATLPID 93
            RP+   +F +  A  L LG     P++
Sbjct: 325 -RPIHQGMFWLLLADCLLLGWIGCQPVE 351

The following BLAST results are available for this feature:

BLAST of HG10017386 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009461758.1	3.6e-48	100.00	cytochrome b/f [Chionanthus parkinsonii] >YP_009547847.1 PetD [Petunia x hybrida...	[more]
QWQ51329.1	3.6e-48	100.00	cytochrome b6-f complex subunit IV [Dickinsia hydrocotyloides]	[more]
YP_009627422.1	3.6e-48	100.00	cytochrome b6/f complex subunit IV [Tinospora cordifolia] >QCC70872.1 cytochrome...	[more]
QYF07576.1	3.6e-48	100.00	cytochrome b6/f complex subunit IV [Prinsepia utilis]	[more]
ADD31066.1	3.6e-48	100.00	cytochrome b6/f complex subunit IV protein [Ficus sp. Moore 315]	[more]

BLAST of HG10017386 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7FNS2	4.7e-51	100.00	Cytochrome b6-f complex subunit 4 OS=Atropa belladonna OX=33113 GN=petD PE=3 SV=...	[more]
Q4VZK4	4.7e-51	100.00	Cytochrome b6-f complex subunit 4 OS=Cucumis sativus OX=3659 GN=petD PE=3 SV=1	[more]
Q2L939	4.7e-51	100.00	Cytochrome b6-f complex subunit 4 OS=Gossypium hirsutum OX=3635 GN=petD PE=3 SV=...	[more]
Q1KXS8	4.7e-51	100.00	Cytochrome b6-f complex subunit 4 OS=Helianthus annuus OX=4232 GN=petD PE=3 SV=1	[more]
Q06RA1	4.7e-51	100.00	Cytochrome b6-f complex subunit 4 OS=Jasminum nudiflorum OX=126431 GN=petD PE=3 ...	[more]

BLAST of HG10017386 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7H1KFU8	1.7e-48	100.00	Cytochrome b6-f complex subunit 4 OS=Meconopsis henrici OX=248836 GN=petD PE=3 S...	[more]
A0A292G397	1.7e-48	100.00	Cytochrome b6-f complex subunit 4 OS=Vitis x champinii OX=884146 GN=petD PE=3 SV...	[more]
A0A1U9YE37	1.7e-48	100.00	Cytochrome b6-f complex subunit 4 OS=Rehmannia glutinosa OX=99300 GN=petD PE=3 S...	[more]
A0A6B9TT79	1.7e-48	100.00	Cytochrome b6-f complex subunit 4 OS=Gonostegia hirta OX=648870 GN=petD PE=3 SV=...	[more]
A0A1U8LXQ6	1.7e-48	100.00	Cytochrome b OS=Gossypium hirsutum OX=3635 GN=LOC107931915 PE=3 SV=1	[more]

BLAST of HG10017386 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00730.1	9.6e-52	99.00	photosynthetic electron transfer D	[more]
AT2G07727.1	3.5e-09	37.50	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	3.5e-09	37.50	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.980	plastocyanin oxidoreductase	coord: 7..99 e-value: 4.4E-30 score: 105.7
None	No IPR available	PANTHER	PTHR19271:SF22	CYTOCHROME B6/F COMPLEX, SUBUNIT IV-RELATED	coord: 2..99
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 2..99
IPR005798	Cytochrome b/b6, C-terminal	PFAM	PF00032	Cytochrom_B_C	coord: 5..93 e-value: 3.2E-20 score: 72.3
IPR005798	Cytochrome b/b6, C-terminal	PROSITE	PS51003	CYTB_CTER	coord: 1..100 score: 17.527653
IPR005798	Cytochrome b/b6, C-terminal	CDD	cd00290	cytochrome_b_C	coord: 1..100 e-value: 1.02225E-37 score: 121.984
IPR005870	Cytochrome b6/f complex, subunit IV	TIGRFAM	TIGR01156	TIGR01156	coord: 1..100 e-value: 1.4E-60 score: 201.8
IPR036150	Cytochrome b/b6, C-terminal domain superfamily	SUPERFAMILY	81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017386.1	HG10017386.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0042651	thylakoid membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity