HG10017365 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017365
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin-conjugating enzyme E2 28
LocationChr03: 13677491 .. 13680513 (-)
RNA-Seq ExpressionHG10017365
SyntenyHG10017365
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTCCGAGTCAGCTTATATGCACTTCGACTGATCTCACAGGACAACCTGCCTAACCCTATAACATTTGGGTGTCAAGGAAATCCGTAAGATATTAAATTCTAAGTAGGTGACCATCACAGATTGAATCCATGACCCCTTAGCCCTTTGACGCTTTTTTTATGAGCTTACCATTTTAGTTTTTACCACGTCTAAATAATATCAGCAAGTCTCCCTTATATCAAAATCAATTGTACTTTTTTTGGATGACAAAATTTTAACTCGACTTTTATACTTTTCAAAACATGTGAACTGTTTTATTACAACAAAGGAATTCAATAGCCAACATGAATAATTCACCTGACATAAAGAGTGTACTATCGATTTTTTAGGTCAGAGATTAGATTCTCATTATAAAAAAAAAAAAAACCAATAAATCAATAATCAAATAAATAAAGCAATAAAGCAATAACCAATTCATAAGAAAGCAATAAAAATTGATGGACTAAAAAATTCTAACTTTTTAAAAGAAAAGACAAACAAAACTTCCTAATTATGAATGTGAAGTAAAAAAAAGGAAAGGATAAGATTAGAATGTGGTAAAAGAAAATGGTGGATTTGGGATCGCTATAAATATTCTAAGTCTTCAATCGTTTGCCTGGCGATTGGCAAAGTTCTTCGGTCTCTAACATTGTCAAATTCCACAAAAAATCAGAGGGTAAAGAGACCGACGAACAAGCAGCGGTTTCTGGGGGCCGCCGTCGATCTGATTTCTAAGCTTATTTCCCTTTCTACAGCTCTTTCCTGCCGATCCTGATCTTCATCCCCTCGTCGATCGCAAACCCTTTTGAGTTCTCAAGGTATTTCTTTCATTTCCATCCGATTTTCCCCTTTTTCTTGCGTTCTGTGTTGGTACTTTTTGTTAATCGCATGCCCTTTGTTTGCTTTGTCATAAGCTTGATGGGTTTTTTGAATCTTCTCGTTTTTGTGTGTAGATCATGGCTTCGAAGCGTATCTTGAAGGAACTTAAGGATTTACAGAAGGATCCACCCACATCTTGCAGTGCTGGTATGGTTCTAAGCCTTGATCTCTTTATTTGGTGACCTATTTTGACCATTTTCTTCGGATTTATTGCGTTTGTTTTGTTGATGGGAATGAATGAGTGAATAAAATGAATTGGTATCTGTTGATTGGTTTTTTTTGTGTTGTTGACCTTTTGATCTGTCTTGATGTGAAGATGTTTATTTGTTTTCTAGTTTTGAGCTTGGGATGTTTTTTTTAGAGATTTTTGTATGGATGACCCAATCGACGCCCTAATCCTAGAAAAACAAATGAAAATTAACCTTCAGCTGATTTCACAAAGCACTATCATGTTTGGAGCGTCTCTCCCATCGGAAAATAGTTGTAGCCCTAACGAGATATTCATTTCATTGCAATTTTTTAAAAATCAACCATTTTTTTTAATTGCAATGATTGAAAATGAAAATCATGAAATGGTCGAGTGAGACGTCCCTAACGTGATAATGGGTGGTAAATTGCTCTATGACGTAAGCAGAATGTTAGTTTTCATTGACTTTTTAGAATTGGTTTATTCAACATTAACTAACGCCGTTGGAATTGGGTCGTCCGTACAAAAATCTTTGTTTTTATTTTATTTTATTTATTTCGTTTGCTTTCGAGGATAGGCCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCTCCAGATTATCCTTTCAAGCCCCCCAAGGTGAATGATGTTTGTCGTTTGTTTGTTGCTCTTAATGATTGCGCAAGATGATTCTATGTTTGTTGTTTCCTTTTCGAATATAATAGGATTGCGAGGTTTAATAGTTATGGATTGTTGTTCAGGTTGCTTTTAGGACCAAAGTGTTTCACCCAAATATCAATAGCAATGGAAGCATTTGTCTTGATATCCTTAAAGAACAGTGGAGCCCTGCGCTTACGATTTCTAAGGTTCGTTTGGCATTTTGTTTCTGAATTCACTCATAGTTCATCATTTTGTTTCAAATTCTCTGGATTGTCATTGTGCTGTTTGCATAAATATAGCTATTTTTGTCATGTTTGAGATCTATATGCTTCTGCCATAGTAAAGTTCTGTGTAGCATGGATGCTTACTCGAAGTTCCCTATTTGATGGAGAATCTTACAACACTTCAGTAGTACTGAAAATTTCACGAACTCGGTTGTGTGGTCTATAATGGACAGCATGTTCAATTTCCATTCTTCGTTTTCTTGGCTGGCTGGTTTGATCACATAAACAGTCTGGATATTTCTTTGAGCCATGGTTTCTTTATGCAATTAGGAGTTCTTTTTTCTGTGAATAATTTGGGTCTCGCTCGACTCCTCGCATTATATTCCCGGGATGGGAGCCATTCCACGGGTAGCTTCGGGGCAGTTGAGAACAGTGGTTGATTTGTGTTTCTACCCCAAAAAGTGTTTGAAGAAGTAGTTGTAGTGTGGCCATTAGTTTGTTTGTTCTACCTTTTCCCTCTCCTTGTCTATATTTAGGAACTACTGCTGTTAAAGTGTAGAAGCCTTCATTTTACCCACATGGCTATTAAATAGCTTAGCTTGATATCTTCACTATGACCTTTTGATCATGGAATAAAATCCCATTTGAGCAGGAAACTCACATTCTCATCAACTTTTTGTTGATTTATGTTCTAGAAATGTTAAAAGTTAAGGTTGACTGACTTTGCGAGAGACCGTAATCATTACCCATCAGTCATGGCCCTCCTGACTGAAAACAAGAGAGAGACTAGAAAATTTTGACTGAGTTAATTCTAAACATAAATGGTGTTCATGAAACAGGTACTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTTGTACCAGAGATCGCGCATATGTACAAGACCGACCGAACCAAGTATGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCTATGGGTTGA

mRNA sequence

ATGAGTGTCCGAGTCAGCTTATATGCACTTCGACTGATCTCACAGGACAACCTGCCTAACCCTATAACATTTGGGTGTCAAGGAAATCCCTCTTTCCTGCCGATCCTGATCTTCATCCCCTCGTCGATCGCAAACCCTTTTGAGTTCTCAAGGTATTTCTTTCATTTCCATCCGATTTTCCCCTTTTTCTTGCGTTCTGTGTTGATCATGGCTTCGAAGCGTATCTTGAAGGAACTTAAGGATTTACAGAAGGATCCACCCACATCTTGCAGTGCTGGCCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCTCCAGATTATCCTTTCAAGCCCCCCAAGGTTGCTTTTAGGACCAAAGTGTTTCACCCAAATATCAATAGCAATGGAAGCATTTGTCTTGATATCCTTAAAGAACAGTGGAGCCCTGCGCTTACGATTTCTAAGGTACTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTTGTACCAGAGATCGCGCATATGTACAAGACCGACCGAACCAAGTATGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCTATGGGTTGA

Coding sequence (CDS)

ATGAGTGTCCGAGTCAGCTTATATGCACTTCGACTGATCTCACAGGACAACCTGCCTAACCCTATAACATTTGGGTGTCAAGGAAATCCCTCTTTCCTGCCGATCCTGATCTTCATCCCCTCGTCGATCGCAAACCCTTTTGAGTTCTCAAGGTATTTCTTTCATTTCCATCCGATTTTCCCCTTTTTCTTGCGTTCTGTGTTGATCATGGCTTCGAAGCGTATCTTGAAGGAACTTAAGGATTTACAGAAGGATCCACCCACATCTTGCAGTGCTGGCCCTGTAGCTGAAGATATGTTCCATTGGCAAGCGACCATTATGGGACCATCTGATAGTCCTTATTCAGGAGGTGTTTTTCTTGTCAATATTCATTTTCCTCCAGATTATCCTTTCAAGCCCCCCAAGGTTGCTTTTAGGACCAAAGTGTTTCACCCAAATATCAATAGCAATGGAAGCATTTGTCTTGATATCCTTAAAGAACAGTGGAGCCCTGCGCTTACGATTTCTAAGGTACTGCTCTCCATATGCTCATTGCTGACCGATCCAAACCCAGACGACCCTCTTGTACCAGAGATCGCGCATATGTACAAGACCGACCGAACCAAGTATGAAGCGAGTGCACGGAGCTGGACTCAGAAGTATGCTATGGGTTGA

Protein sequence

MSVRVSLYALRLISQDNLPNPITFGCQGNPSFLPILIFIPSSIANPFEFSRYFFHFHPIFPFFLRSVLIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG
Homology
[Close]
BLAST of HG10017365 vs. NCBI nr
Match: KAG6595545.1 (Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-82
Identity = 157/174 (90.23%), Postives = 161/174 (92.53%), Query Frame = 0 

Query: 48  EFSRYFFHFHPIF---PF-FLRSVLIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQ 107
           +F  YF  F+P+    PF FL+   IMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQ
Sbjct: 131 DFEPYFSDFYPLVDRKPFCFLK---IMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQ 190

Query: 108 ATIMGPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWS 167
           ATIMGPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWS
Sbjct: 191 ATIMGPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWS 250

Query: 168 PALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 251 PALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG 301

[Close]
BLAST of HG10017365 vs. NCBI nr
Match: TYK09753.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 314.7 bits (805), Expect = 6.2e-82
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 59  IFPFFLRSVLIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGV 118
           I  F  +++ IMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGV
Sbjct: 30  IVKFHKKNLRIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGV 89

Query: 119 FLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL 178
           FLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL
Sbjct: 90  FLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL 149

Query: 179 LTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           LTDPNPDDPLVPEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 150 LTDPNPDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG 188

[Close]
BLAST of HG10017365 vs. NCBI nr
Match: MBA0628471.1 (hypothetical protein [Gossypium davidsonii])

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-81
Identity = 152/170 (89.41%), Postives = 158/170 (92.94%), Query Frame = 0 

Query: 49  FSRYFFHFHPIFPFFLRSV-LIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIM 108
           FS + F F P+   FL SV  +MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIM
Sbjct: 3   FSDFVFRFLPVLLGFLWSVQSVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIM 62

Query: 109 GPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 168
           GPSDSPY+GGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT
Sbjct: 63  GPSDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 122

Query: 169 ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYEA+AR WTQKYAMG
Sbjct: 123 ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARGWTQKYAMG 172

[Close]
BLAST of HG10017365 vs. NCBI nr
Match: XP_023550211.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 5.3e-81
Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 67  VLIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFP 126
           +L+MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVNIHFP
Sbjct: 40  ILVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFP 99

Query: 127 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 186
           PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 100 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 159

Query: 187 PLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PLVPEIAHMYKTDR+KYEA+ARSWTQKYAMG
Sbjct: 160 PLVPEIAHMYKTDRSKYEATARSWTQKYAMG 190

[Close]
BLAST of HG10017365 vs. NCBI nr
Match: XP_004142676.1 (ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >XP_008463276.1 PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis melo] >XP_022144084.1 ubiquitin-conjugating enzyme E2 28-like [Momordica charantia] >XP_022924950.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022950142.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022966476.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_022978308.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_023517728.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_023517729.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_023543247.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_038882512.1 ubiquitin-conjugating enzyme E2 28-like [Benincasa hispida] >KAG6595637.1 Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia] >KGN54461.1 hypothetical protein Csa_012070 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 5.3e-81
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.2e-82
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-82
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYE +ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-82
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-81
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.5e-81
Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS+SPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTD+ KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy TrEMBL
Match: A0A5D3CD22 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00350 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.0e-82
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = 0 

Query: 59  IFPFFLRSVLIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGV 118
           I  F  +++ IMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGV
Sbjct: 30  IVKFHKKNLRIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGV 89

Query: 119 FLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL 178
           FLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL
Sbjct: 90  FLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL 149

Query: 179 LTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           LTDPNPDDPLVPEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 150 LTDPNPDDPLVPEIAHMYKTDRAKYEASARSWTQKYAMG 188

[Close]
BLAST of HG10017365 vs. ExPASy TrEMBL
Match: A0A7J8SQU5 (UBC core domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_023194 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.8e-82
Identity = 152/170 (89.41%), Postives = 158/170 (92.94%), Query Frame = 0 

Query: 49  FSRYFFHFHPIFPFFLRSV-LIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIM 108
           FS + F F P+   FL SV  +MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIM
Sbjct: 3   FSDFVFRFLPVLLGFLWSVQSVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIM 62

Query: 109 GPSDSPYSGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 168
           GPSDSPY+GGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT
Sbjct: 63  GPSDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 122

Query: 169 ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYEA+AR WTQKYAMG
Sbjct: 123 ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARGWTQKYAMG 172

[Close]
BLAST of HG10017365 vs. ExPASy TrEMBL
Match: A0A6J1ISN6 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111478335 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy TrEMBL
Match: A0A6J1EGH9 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC111432341 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. ExPASy TrEMBL
Match: A0A0A0L2X5 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334720 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.6e-81
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYEASARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEASARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 308.1 bits (788), Expect = 5.4e-84
Identity = 144/153 (94.12%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 65  RSVLIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIH 124
           R +L MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IH
Sbjct: 26  RGILEMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIH 85

Query: 125 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 184
           FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP
Sbjct: 86  FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145

Query: 185 DDPLVPEIAHMYKTDRTKYEASARSWTQKYAMG 218
           DDPLVPEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 146 DDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]
BLAST of HG10017365 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-83
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-83
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYE++ARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 304.7 bits (779), Expect = 6.0e-83
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTD+ KYE++AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]
BLAST of HG10017365 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 304.3 bits (778), Expect = 7.9e-83
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVNIHFPPDY 129
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYSGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 189
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 190 PEIAHMYKTDRTKYEASARSWTQKYAMG 218
           PEIAHMYKTDR KYEA+AR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

The following BLAST results are available for this feature:
BLAST of HG10017365 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595545.11.3e-8290.23Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. soror... [more]
TYK09753.16.2e-8294.34ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa][more]
MBA0628471.11.8e-8189.41hypothetical protein [Gossypium davidsonii][more]
XP_023550211.15.3e-8196.03ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo][more]
XP_004142676.15.3e-8199.32ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >XP_008463276.1 PREDICTED: ... [more]
BLAST of HG10017365 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94F472.2e-8296.62Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
P351358.5e-8295.95Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P351328.5e-8295.95SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1[more]
P351311.1e-8195.95Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
P351332.5e-8195.27Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
BLAST of HG10017365 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CD223.0e-8294.34Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A7J8SQU58.8e-8289.41UBC core domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_023... [more]
A0A6J1ISN62.6e-8199.32ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111478... [more]
A0A6J1EGH92.6e-8199.32ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A0A0L2X52.6e-8199.32UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334720 PE... [more]
BLAST of HG10017365 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27960.25.4e-8494.12ubiquitin conjugating enzyme 9 [more]
AT1G64230.11.6e-8396.62ubiquitin-conjugating enzyme 28 [more]
AT1G64230.21.6e-8396.62ubiquitin-conjugating enzyme 28 [more]
AT4G27960.16.0e-8395.95ubiquitin conjugating enzyme 9 [more]
AT5G41700.27.9e-8395.95ubiquitin conjugating enzyme 8 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 73..216
e-value: 2.5E-78
score: 276.2
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 72..214
NoneNo IPR availablePANTHERPTHR24068:SF346BNAA01G32320D PROTEINcoord: 72..214
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 74..210
e-value: 4.2E-53
score: 178.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 70..216
score: 60.621727
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 72..211
e-value: 8.88205E-73
score: 215.529
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 65..217
e-value: 3.0E-74
score: 249.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 65..216
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 143..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017365.1HG10017365.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0016925 protein sumoylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016746 acyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004839 ubiquitin activating enzyme activity
molecular_function GO:0061631 ubiquitin conjugating enzyme activity