HG10017314 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017314
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein of unknown function, DUF538
Location	Chr03: 13020684 .. 13023986 (-)
RNA-Seq Expression	HG10017314
Synteny	HG10017314

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATTCGCTTCAATCAAGGGTCTTTCAATGAGAGATCTATTATTCATCTCGTGGAATCTTCGCTGGAAGTCTCTTTCCAGAAGTTTCTCCTTCCGAGCTTCGTCTGGAGAGGAGTGGGTGGAAAGCTCCAAAGGAGGGTCATTAGAAGCTCAATGTGGAGCTTGGTCAGAGTTTAATCAAAGGGGAGGTTTGAGATGATTCTTTGTGATCATCTTGAGAAGTTAATTATGGGAGGTTGCAAGTTTTTGAACCACAATTGGGGAGTCAAAGTTTTGGAAACTAAAGTTTGTGGTGATTAGTTTGGCTGAGTTAAAAAAGTTGTGGCACGGGCAAAATCCTCCTGTGGAAGTCAAGTTTGTTTCTTTGGAGGTGATTAGATTGTTGAACTATATAGACTCTGATTTGTTTGAAGTTGATTTTTTTTTTGTGAAGGAGGCTCTTAGCCTCACTGCTTTTGTAAATATCTATAATTTTTGTAAGATCCATAGAGAGGAGGACAAAGTTGCACATAATTTAGCTTCTTTGGCTTCCTCTTCTAGGTCAAATTGAGTTTGGAAAAATTACTTTCCAGCTTTTGTGTTTTCCCCTTATTCTTAAAGGGGGTTGATGGTTTCCGTGTGTTGTTGGTGGTGTTTCGGCTAATGCATTATTGTTTTTAAAAAAAGAAAAAAAAATTATTCCCCATTGTGTAAAATCTCTTCAATTGTCAATTTTTAAACACACTTTTTCCTCTCTTCTTTAATATCATCTTACTCCCCTTTCTTCCATTCACTATTCCCTAAAACTAAGTAGTTTTATGTAGGCTACCAAGAAGAAAAAAATAATAGAATCACCAAGAAATCTTGTGACTTAAATATTCTAATAAGGTTTTACGTTAGTAGTTGAGTGAGTGTTAATATGAAATTTGACTTTAATCCAAAAAGAGGAACACAATGAGAATTTGAGTCATGATTTTGAGGATGACCAACACGAGGAAAAAGAAAGAAAATATGTGTATTACCAAATATGTGTAAATGATTCGATAACTTGAACTAACCCAACTTGAATATTTCATAGTTGGGTTAGATTAGGTTGATTATTTAATAAGAATTATTGGACTTGAAAAGATTTATGATTCTAAAATTAAATTTGATAAAAAGTACTTTAACACGACTCAATGAACTCGCAAACACTTCTAAAATTAAATTTGATAAAAAGTGCTTTAACCCGACTCAATCAACTCGCAAACACCCCTAGCTGTTGCCATTTTGAGGGCACAATGGTGCATGTACGGCACGTCGTAATTTGTTCGAAACTGGTATTCCAGATCATCTATTTAACTTTGACGACATGTAGTTCGTCAAAATAAAAAGTAAAATAAAAATAAAAATAGAAAACGTTGCTATTAAATTTCAATTTTCAGAAAATTCGCACGGAAGAACGCGTGGAGAGGGAGACGAGACAACTTCATCTCTCTCTCTCTCTCTCTCTCTCATCGCCATTTCTTCTGTCTTGCGATTCTTCCAAATTGACCTAACTGGCTTTTAGCTTCTTCGTTAAGGATCGATTTCTACTGGTTCTTCCGTTCAATTGAAGCTCGGAATGGATCAGGTTATGAACAAAGTTGGCTCTTATTGGTTCAGCCAGAAGGCCAACAAGGAGATCGGCTCCATCGGCGATGATATTAATGTATACCCTCTTCTCTCTCCTTTCACTTTTTTTTTTCCTTCTTCTTTATTAATTGCTGTATGATTCCGTTTGCGTTTCCTTTGTTGTTTTAATTCGTTCTTTCGTTTTTTAAAATCACAATTAGCGCTTTTATGATGTCGGATACGTCGAATCATCCAGCTTCTGATATTCATTTCTTTGCCTTAATTAACACCTAGAGCTTTAATTTTACAATAATTTGTTGTGGCCATTTTTATTCTGGATAAGAAATTTGGTTCAACGACCTAGGGTAGAGAAATTGAATTCGATAGTTTTGACACTTTCTTGCTGGATTGTCGTGTTGAGGAGTCTAATTAGTCGGATTTCCATCTTGGCCGGCGGAGCGAGGTCACTAATTTTCCCAATTCTGTTCGGAAATTTACTAATGCGCCATTGGACGAGGACGTCTAGGTTAGCTCAAAAACCCCATTTATTAGCCGGATAATTGTGTCTTACAAGTTATTTGGAAAACGGGAAATTCATTAGGAAGAAGCGTAAGCCTCCCGCTTCTTTTGGTCATAATATTATATGGCTTGGAATTCCTATGCTTGAGCCCCCTTGAAAACCACCCCCTTGAAAACCAGAGTTTTTGGTTGTAGTATCATACATCGTATGTACTGTTTGATTAGTTTATCCTGGGTTCAATGCCAGTTCTTTCATCCAAGAAAAATAGTTTCCTCTAGCTTTATTTTAATATAAAATTTGTGCAGGTTGAATTGTTTAATTTGTGCGTGGACTACTACAGCAATTTATAATTTGATATCTTCCTTTGCACCCAATACTTTTTGCTTCATTATTTATTAATTCATATTAAGCTTATATATCTTCCTTCACTCTTACTATTCTATTATCAGTCATTATCAACGAGTATTCAAGGAGGAACTAGCTGGTTGGTTAATAAAATAAAAGGTTAGTTTTTCTTTTTTGATTAGGTACTGTTTATATTTTTAATAATATTATCACATGATGTTAAAGTTAATTCTCTTTTTTTCCCCTTTTTGATAAGAATGTTAATTCTCTGAATATTAAATGGTTGTTCCTTTAAAATATACTGGGGCCTAATATGATCTTTGGAGATTGCAATGTTTATTTTCTGGACTCGAAGGCCTCTAAAGTTGTGTGTGAATTCACCAAGTTATATAGTTTTGTATGCGGTTGCTCTAACAATGCTAAAATAGTTGTCATATTGTTCTCGCTTGCTCAGGACGACATTATTTTGATCCATCTTTCTTGATCTTCATAGGTAAAATGCAAAAACCTTTGCCAGACCTGCTGAAGGATTATGACTTGGCAGTGGGAATCTTCCCTCGGAATGCAACCAACTATGAGTTCAACGAGGAGACAGGAAAGCTGACTGTCTTCATCCCAGAAATCTGCGAAGTTGGGTATAAAGACTCATCAGTCTTGCGCTTCAACACCACTGTGACTGGATATCTGGAGAAGGGAAAGCTAGCGGACATAGAGGGAATGAAAACTAAGGTGATGATATGGGTAAAAGTAACCTGTATTACTTCTGATGGACCGAAGCTCAACTTCACTGCTGGAATGAAGAAAACCAGGAAAAGAGAAGCGTATGAAGTCCTTAGAGATGGTGTAAATGTTGATAAGTTCTAA

mRNA sequence

ATGATATTCGCTTCAATCAAGGGTCTTTCAATGAGAGATCTATTATTCATCTCGTGGAATCTTCGCTGGAAGTCTCTTTCCAGAAGTTTCTCCTTCCGAGCTTCGTCTGGAGAGGAGTGGGTGGAAAGCTCCAAAGGAGGGTCATTAGAAGCTCAATGTGGAGCTTGGTCAGAGTTTAATCAAAGGGGAGGATCGATTTCTACTGGTTCTTCCGTTCAATTGAAGCTCGGAATGGATCAGGTTATGAACAAAGTTGGCTCTTATTGGTTCAGCCAGAAGGCCAACAAGGAGATCGGCTCCATCGGCGATGATATTAATGGAAAGCTAGCGGACATAGAGGGAATGAAAACTAAGGTGATGATATGGGTAAAAGTAACCTGTATTACTTCTGATGGACCGAAGCTCAACTTCACTGCTGGAATGAAGAAAACCAGGAAAAGAGAAGCGTATGAAGTCCTTAGAGATGGTGTAAATGTTGATAAGTTCTAA

Coding sequence (CDS)

ATGATATTCGCTTCAATCAAGGGTCTTTCAATGAGAGATCTATTATTCATCTCGTGGAATCTTCGCTGGAAGTCTCTTTCCAGAAGTTTCTCCTTCCGAGCTTCGTCTGGAGAGGAGTGGGTGGAAAGCTCCAAAGGAGGGTCATTAGAAGCTCAATGTGGAGCTTGGTCAGAGTTTAATCAAAGGGGAGGATCGATTTCTACTGGTTCTTCCGTTCAATTGAAGCTCGGAATGGATCAGGTTATGAACAAAGTTGGCTCTTATTGGTTCAGCCAGAAGGCCAACAAGGAGATCGGCTCCATCGGCGATGATATTAATGGAAAGCTAGCGGACATAGAGGGAATGAAAACTAAGGTGATGATATGGGTAAAAGTAACCTGTATTACTTCTGATGGACCGAAGCTCAACTTCACTGCTGGAATGAAGAAAACCAGGAAAAGAGAAGCGTATGAAGTCCTTAGAGATGGTGTAAATGTTGATAAGTTCTAA

Protein sequence

MIFASIKGLSMRDLLFISWNLRWKSLSRSFSFRASSGEEWVESSKGGSLEAQCGAWSEFNQRGGSISTGSSVQLKLGMDQVMNKVGSYWFSQKANKEIGSIGDDINGKLADIEGMKTKVMIWVKVTCITSDGPKLNFTAGMKKTRKREAYEVLRDGVNVDKF

Homology

[Close]

BLAST of HG10017314 vs. NCBI nr
Match: XP_038881977.1 (uncharacterized protein At5g01610-like [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 5.1e-28
Identity = 82/170 (48.24%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQVMNKVGSYWFSQKANKEIGSIGDDIN                               
Sbjct: 1   MDQVMNKVGSYWFSQKANKEIGSIGDDINSLSTSIQEGTSWLVNKIKGKMQKPLPDLLKD 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAVGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFNTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. NCBI nr
Match: XP_004148607.1 (uncharacterized protein At5g01610 [Cucumis sativus] >KAE8649570.1 hypothetical protein Csa_018014 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 6.6e-28
Identity = 81/170 (47.65%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ+MNKVGSYWF+QKA+KEIGSIGDDIN                               
Sbjct: 1   MDQIMNKVGSYWFNQKASKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQKPLPDLLKD 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAVGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFNNTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. NCBI nr
Match: XP_008464225.1 (PREDICTED: uncharacterized protein At5g01610 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 8.6e-28
Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ+MNK+GSYWF+QKA+KEIGSIGDDIN                               
Sbjct: 1   MDQIMNKIGSYWFNQKASKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQKPLPDLLKD 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAVGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFNTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. NCBI nr
Match: XP_022950320.1 (uncharacterized protein At5g01610-like [Cucurbita moschata] >KAG7033754.1 hypothetical protein SDJN02_03479 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27
Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQVMNKVGSYWF+QKANKEIGSIGDDIN                               
Sbjct: 1   MDQVMNKVGSYWFNQKANKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQTPLPDLLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLATGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFSTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. NCBI nr
Match: XP_022978299.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27
Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQVMNKVGSYWF+QKANKEIGSIGDDIN                               
Sbjct: 1   MDQVMNKVGSYWFNQKANKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQTPLPDLLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAMGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFSTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. ExPASy Swiss-Prot
Match: Q9M015 (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-18
Identity = 58/170 (34.12%), Postives = 72/170 (42.35%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ+ NKVGSYW  QKANK+  S+G+D+N                               
Sbjct: 1   MDQIFNKVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKL D+
Sbjct: 61  YDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDV 120

[Close]

BLAST of HG10017314 vs. ExPASy TrEMBL
Match: A0A1S3CL12 (uncharacterized protein At5g01610 OS=Cucumis melo OX=3656 GN=LOC103502156 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28
Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ+MNK+GSYWF+QKA+KEIGSIGDDIN                               
Sbjct: 1   MDQIMNKIGSYWFNQKASKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQKPLPDLLKD 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAVGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFNTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. ExPASy TrEMBL
Match: A0A6J1ITQ2 (uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC111478328 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQVMNKVGSYWF+QKANKEIGSIGDDIN                               
Sbjct: 1   MDQVMNKVGSYWFNQKANKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQTPLPDLLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAMGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFSTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. ExPASy TrEMBL
Match: A0A6J1GFE1 (uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC111453437 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 80/170 (47.06%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQVMNKVGSYWF+QKANKEIGSIGDDIN                               
Sbjct: 1   MDQVMNKVGSYWFNQKANKEIGSIGDDINSLSTSIQGGTSWLVNKIKGKMQTPLPDLLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLATGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFSTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. ExPASy TrEMBL
Match: A0A5N6M190 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_35517 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-26
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------GKLADIEGMKTKV 137
           MDQ+M K GSYW   KANKE+ S+GDDIN                  GKL D+EG+KTKV
Sbjct: 1   MDQLMGKFGSYWLGNKANKELNSVGDDINSLQSSISGGATWFVNKMKGKLTDVEGLKTKV 60

Query: 138 MIWVKVTCITSDGPKLNFTAGMKKTRKREAYEVLRDGVNVDKF 163
           MIWVKVTCITS+G K++FT G+KKTR R+AYEV RDG+ VDKF
Sbjct: 61  MIWVKVTCITSEGSKVHFTTGLKKTRSRQAYEVCRDGITVDKF 103

[Close]

BLAST of HG10017314 vs. ExPASy TrEMBL
Match: A0A6J1CS63 (uncharacterized protein At5g01610-like OS=Momordica charantia OX=3673 GN=LOC111013838 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 79/170 (46.47%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQVMNKVGSYWF+QKA KEIGSIGDDIN                               
Sbjct: 1   MDQVMNKVGSYWFNQKATKEIGSIGDDINSLSTSLQDGTNWLVNKIKGKMQKPLPDLLKD 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLADI
Sbjct: 61  YDLAVGIFPRDATNYEFNEETGKLTVFIPEICEVGYKDSSVLRFSTTVTGYLEKGKLADI 120

[Close]

BLAST of HG10017314 vs. TAIR 10
Match: AT3G08890.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 105.1 bits (261), Expect = 5.2e-23
Identity = 63/170 (37.06%), Postives = 77/170 (45.29%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ++NKVGSYW  +KANK++ S+GDDIN                               
Sbjct: 1   MDQILNKVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLAD+
Sbjct: 61  FGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADV 120

[Close]

BLAST of HG10017314 vs. TAIR 10
Match: AT3G08890.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 105.1 bits (261), Expect = 5.2e-23
Identity = 63/170 (37.06%), Postives = 77/170 (45.29%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ++NKVGSYW  +KANK++ S+GDDIN                               
Sbjct: 1   MDQILNKVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLAD+
Sbjct: 61  FGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADV 120

[Close]

BLAST of HG10017314 vs. TAIR 10
Match: AT5G37070.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-22
Identity = 62/170 (36.47%), Postives = 74/170 (43.53%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ++NKVGSYW  QKANKE  S+GDD N                               
Sbjct: 1   MDQILNKVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKLA++
Sbjct: 61  FGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKGKLAEV 120

[Close]

BLAST of HG10017314 vs. TAIR 10
Match: AT5G01610.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-19
Identity = 58/170 (34.12%), Postives = 72/170 (42.35%), Query Frame = 0


Query: 78  MDQVMNKVGSYWFSQKANKEIGSIGDDIN------------------------------- 137
           MDQ+ NKVGSYW  QKANK+  S+G+D+N                               
Sbjct: 1   MDQIFNKVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKE 60

Query: 138 ------------------------------------------------------GKLADI 163
                                                                 GKL D+
Sbjct: 61  YDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDV 120

[Close]

BLAST of HG10017314 vs. TAIR 10
Match: AT2G03350.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 105 INGKLADIEGMKTKVMIWVKVTCI---TSDGPKLNFTAGMKKTRKREAYEVLRDGVNV 160
           + GKL  +EGMKTKV++WVKVT I   +S   KL FTAG+KK+R ++ Y+   D + V
Sbjct: 118 LRGKLMGVEGMKTKVLVWVKVTTISVESSKSDKLWFTAGVKKSRSKDVYDTPHDAIKV 175

The following BLAST results are available for this feature:

BLAST of HG10017314 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881977.1	5.1e-28	48.24	uncharacterized protein At5g01610-like [Benincasa hispida]	[more]
XP_004148607.1	6.6e-28	47.65	uncharacterized protein At5g01610 [Cucumis sativus] >KAE8649570.1 hypothetical p...	[more]
XP_008464225.1	8.6e-28	47.06	PREDICTED: uncharacterized protein At5g01610 [Cucumis melo]	[more]
XP_022950320.1	3.3e-27	47.06	uncharacterized protein At5g01610-like [Cucurbita moschata] >KAG7033754.1 hypoth...	[more]
XP_022978299.1	3.3e-27	47.06	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]

BLAST of HG10017314 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M015	2.9e-18	34.12	Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 P...	[more]

BLAST of HG10017314 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CL12	4.2e-28	47.06	uncharacterized protein At5g01610 OS=Cucumis melo OX=3656 GN=LOC103502156 PE=4 S...	[more]
A0A6J1ITQ2	1.6e-27	47.06	uncharacterized protein At5g01610-like OS=Cucurbita maxima OX=3661 GN=LOC1114783...	[more]
A0A6J1GFE1	1.6e-27	47.06	uncharacterized protein At5g01610-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A5N6M190	1.0e-26	60.19	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_35517 PE=4 SV=1	[more]
A0A6J1CS63	1.3e-26	46.47	uncharacterized protein At5g01610-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of HG10017314 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08890.1	5.2e-23	37.06	Protein of unknown function, DUF538	[more]
AT3G08890.2	5.2e-23	37.06	Protein of unknown function, DUF538	[more]
AT5G37070.1	3.4e-22	36.47	Protein of unknown function, DUF538	[more]
AT5G01610.1	2.1e-19	34.12	Protein of unknown function, DUF538	[more]
AT2G03350.1	8.7e-10	50.00	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 102..162 e-value: 8.9E-17 score: 63.1
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 106..162
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 106..151 e-value: 3.2E-6 score: 27.5
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 106..162
None	No IPR available	PANTHER	PTHR31676:SF102	DUF538 FAMILY PROTEIN	coord: 106..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017314.1	HG10017314.1	mRNA