HG10017254 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017254
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-CH-type domain-containing protein
LocationChr03: 12324570 .. 12326086 (-)
RNA-Seq ExpressionHG10017254
SyntenyHG10017254
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTTAGAGACGGCCGGAGCGGATTTGGAGAAAGGGTGGCGGCAGACGGCGGCGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGAAGGTGAATTTGGAGAGGGATTGTAGGATTTGCCATTTGGGATTAGAAAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCTCATAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGTGAGTTTCGTTTTCAAATCCCAATCCACCCCCTTTTTTTTAATTTCTTCACTAAATGATTCATTATGATGGTTAGAATCATTTTTGTCATGTTTAAAATCGAGATTTTTTTTTTGTAGGAATGATCTATTCTGAGCCACTAAACGATTACTAACTCGCCTTTCGCAAACAAATGAAATCTAACATTATGCTTACGTCAAAGTGCACTATCGTGTTTTATACGGTATCGCATTAGAGATGTTCATGTCTATCGTAGTCTTAATATAATAGGCATGTCTATCGCGATCTTCATTTTTCTCACACTTTGTTGTGCTTTTATTGCGATAGAGTAGAGAAAAATGAAGGATTGTGATAGATATAACCTCGCCCTTTAGGACTACGATAGACATAGACATCACTAATGCGATGTGATATAAAAGACGATAGTAGTGAATGACTATTTGTATTAAAAAAAAAAAATCTTTAATATCATTATGAAAACTCTTTAATTATTTAGGTTAAGTTGTGATGATATAAAATTGTGTTTAAAAGGGCCAAACTAAATACTAAATTGAGTTTTATTGGGAAGGTGGGTGCTTTAATATAGAAATTTGTTATTAGTTGAGTTTTTAATTTAAACTTTTTTTTTTTAGCAAAGCCTAAGAAAGGTATAAAGGGAAAGTTAATAGAAATAATGCTATCTTAGTGAAAAGGAATAGAATTAAGTGAGTGAAGCATTTTTTAAGAAAAAAATTCCTTGAACTTTGTCTCACTTTACTAACTCTCTACCTTGTATTAATTATTCTCTTGCCTTTTATAAACATTGGAATCCTTTCTTGCTTTATTTTTTTAAAATGTATCTTTAATAATTCTAAATCTTTTAGTTTTAATTTGTGTTGAATTGATAACAAAATAAAAGGCTTTTGTGAATTCAAGATCAAGTCTTCTTGCTTGAAAATACAATTTTGGAGGAGAGTTTTAGTTTTTTTAAGCATGTAAATGATATATAACTTGAATATGGTTGGTTTTTTTGTTAGGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAACTTGAACAAATGGAGCAACCCCATGAGTCAAACAATGGGACGGTATCAATGGCCATGGTTGCAGCGTCGGTGGCTGCCGCTCCTAGCGGTGGCCGGAACTTTTGGCATGTTCATCGAGTCCTCAATTTTCTTCTTGTTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATATGCCATCATAA

mRNA sequence

ATGGCAGCTTTAGAGACGGCCGGAGCGGATTTGGAGAAAGGGTGGCGGCAGACGGCGGCGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGAAGGTGAATTTGGAGAGGGATTGTAGGATTTGCCATTTGGGATTAGAAAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCTCATAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAACTTGAACAAATGGAGCAACCCCATGAGTCAAACAATGGGACGGTATCAATGGCCATGGTTGCAGCGTCGGTGGCTGCCGCTCCTAGCGGTGGCCGGAACTTTTGGCATGTTCATCGAGTCCTCAATTTTCTTCTTGTTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATATGCCATCATAA

Coding sequence (CDS)

ATGGCAGCTTTAGAGACGGCCGGAGCGGATTTGGAGAAAGGGTGGCGGCAGACGGCGGCGGCGGAGAGGGGAAGTGGAGTTGGTGAAGTGAAGAAGGTGAATTTGGAGAGGGATTGTAGGATTTGCCATTTGGGATTAGAAAGCAATAGCAGTGAGTTTGGAGTTGGAATTGAATTGGGTTGTTGTTGTAAGAATGATTTGGGTGCTGCTCATAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTAATGGTAGCACATGAACTTGAACAAATGGAGCAACCCCATGAGTCAAACAATGGGACGGTATCAATGGCCATGGTTGCAGCGTCGGTGGCTGCCGCTCCTAGCGGTGGCCGGAACTTTTGGCATGTTCATCGAGTCCTCAATTTTCTTCTTGTTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATATGCCATCATAA

Protein sequence

MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS
Homology
BLAST of HG10017254 vs. NCBI nr
Match: XP_038883458.1 (uncharacterized protein LOC120074413 [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 6.0e-77
Identity = 148/167 (88.62%), Postives = 151/167 (90.42%), Query Frame = 0

Query: 1   MAALETAGADLEKGWRQTAAAERGSGVGEVKKV-NLERDCRICHLGLESNSSEFGVGIEL 60
           MAALETAGADLEKGWRQT AAERGSGVGE  KV NLERDCRICHLGL SNS+EFGVGIEL
Sbjct: 1   MAALETAGADLEKGWRQT-AAERGSGVGEEVKVNNLERDCRICHLGLVSNSNEFGVGIEL 60

Query: 61  GCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSM 120
           GCCCKNDL  AHKHCAEAWFKIRGNKTCEICHSIVRNVMV  E EQ EQ HESNNGTVS 
Sbjct: 61  GCCCKNDLSTAHKHCAEAWFKIRGNKTCEICHSIVRNVMVVREPEQTEQLHESNNGTVST 120

Query: 121 AMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS 167
           A VAASVAA PSGGR+FWHVHRVLNFLL CMVFAFVISWLFHFN+PS
Sbjct: 121 ATVAASVAATPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS 166

BLAST of HG10017254 vs. NCBI nr
Match: KAG7027374.1 (hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63
Identity = 130/166 (78.31%), Postives = 137/166 (82.53%), Query Frame = 0

Query: 1   MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELG 60
           MAALETAG DLE+G R      RG+  GEV KV+ ERDCRICHLGLESNSSE G  IELG
Sbjct: 1   MAALETAGVDLEEGGR-GGDGGRGAEAGEV-KVHSERDCRICHLGLESNSSECGTAIELG 60

Query: 61  CCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMA 120
           C CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV V HELEQMEQ HE NNGT+S  
Sbjct: 61  CSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGV-HELEQMEQLHEFNNGTLSTT 120

Query: 121 MVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS 167
            VAASVAA+P GGR FW VHRVLNFLL C+VFAFVISWLFHFNM S
Sbjct: 121 TVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS 163

BLAST of HG10017254 vs. NCBI nr
Match: KAG6595366.1 (hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62
Identity = 129/166 (77.71%), Postives = 135/166 (81.33%), Query Frame = 0

Query: 1   MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELG 60
           MAALETAG DLE+G R      R    GEV KV+ ERDCRICHLGLESNSSE G  IELG
Sbjct: 1   MAALETAGVDLEEGGRGGDGGRRAE-AGEV-KVHSERDCRICHLGLESNSSECGTAIELG 60

Query: 61  CCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMA 120
           C CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV V HELEQMEQ HE NNGT+S  
Sbjct: 61  CSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGV-HELEQMEQLHEFNNGTLSTT 120

Query: 121 MVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS 167
            VAASVAA+P GGR FW VHRVLNFLL C+VFAFVISWLFHFNM S
Sbjct: 121 TVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS 163

BLAST of HG10017254 vs. NCBI nr
Match: XP_023517920.1 (uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.3 bits (630), Expect = 9.4e-62
Identity = 128/166 (77.11%), Postives = 133/166 (80.12%), Query Frame = 0

Query: 1   MAALETAGADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIELG 60
           MAALETAG DLE+G R      R    GEV KV+ ERDCRICHLGLESNSSE G  IELG
Sbjct: 1   MAALETAGVDLEEGGRGGHGGRRAE-AGEV-KVHSERDCRICHLGLESNSSECGTAIELG 60

Query: 61  CCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMA 120
           C CKNDL AAHKHCAEAWFKIRGNKTCEICHSIV+NV   HELEQMEQ HE NNGT+S  
Sbjct: 61  CSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGGVHELEQMEQLHELNNGTLSTT 120

Query: 121 MVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS 167
            VAASV AAP GGR FW VHRVLNFLL C+VFAFVISWLFHFNM S
Sbjct: 121 TVAASV-AAPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS 163

BLAST of HG10017254 vs. NCBI nr
Match: XP_022151515.1 (uncharacterized protein LOC111019441, partial [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 2.8e-58
Identity = 117/167 (70.06%), Postives = 132/167 (79.04%), Query Frame = 0

Query: 1   MAALETAG-ADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIEL 60
           +AA++T G ADLE+G        R S  GE ++   ERDCRICHLGLES+S E G+GIEL
Sbjct: 18  IAAVDTPGSADLEQG--------RCSSGGERRREAAERDCRICHLGLESSSDECGIGIEL 77

Query: 61  GCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSM 120
           GC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV+ AHE+E +EQ  ESNN TVS 
Sbjct: 78  GCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVSNVIGAHEVEPVEQLSESNNATVST 137

Query: 121 AMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS 167
             VA SV   P+GGR+FW VHRVLNFLL CMVFAFVISWLFHFN+PS
Sbjct: 138 TTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS 176

BLAST of HG10017254 vs. ExPASy TrEMBL
Match: A0A6J1DBE4 (uncharacterized protein LOC111019441 OS=Momordica charantia OX=3673 GN=LOC111019441 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 117/167 (70.06%), Postives = 132/167 (79.04%), Query Frame = 0

Query: 1   MAALETAG-ADLEKGWRQTAAAERGSGVGEVKKVNLERDCRICHLGLESNSSEFGVGIEL 60
           +AA++T G ADLE+G        R S  GE ++   ERDCRICHLGLES+S E G+GIEL
Sbjct: 18  IAAVDTPGSADLEQG--------RCSSGGERRREAAERDCRICHLGLESSSDECGIGIEL 77

Query: 61  GCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSM 120
           GC CKNDLGAAHKHCAEAWFKIRGNKTCEICHS+V NV+ AHE+E +EQ  ESNN TVS 
Sbjct: 78  GCSCKNDLGAAHKHCAEAWFKIRGNKTCEICHSVVSNVIGAHEVEPVEQLSESNNATVST 137

Query: 121 AMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNMPS 167
             VA SV   P+GGR+FW VHRVLNFLL CMVFAFVISWLFHFN+PS
Sbjct: 138 TTVATSVTGGPNGGRSFWQVHRVLNFLLACMVFAFVISWLFHFNVPS 176

BLAST of HG10017254 vs. ExPASy TrEMBL
Match: A0A6A3CP99 (Laccase-8-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002942pilonHSYRG00005 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49
Identity = 99/144 (68.75%), Postives = 114/144 (79.17%), Query Frame = 0

Query: 25  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIR 84
           SG  E+K      E++CRICHLGLESNS E GV IELGC CK+DL  AHKHCAEAWFKIR
Sbjct: 88  SGANEIKVHLAKAEKNCRICHLGLESNSHESGVAIELGCSCKDDLATAHKHCAEAWFKIR 147

Query: 85  GNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRV 144
           GNKTCEICHSI RNV++A+E+E MEQP+E+N+ T   A  A S AA+ S  R+FWH HR 
Sbjct: 148 GNKTCEICHSIARNVILANEIELMEQPNETNSST---ATAAVSGAASYSDSRSFWHSHRF 207

Query: 145 LNFLLVCMVFAFVISWLFHFNMPS 167
           LNFLL CMVFAFVISWLFHF++PS
Sbjct: 208 LNFLLACMVFAFVISWLFHFSVPS 228

BLAST of HG10017254 vs. ExPASy TrEMBL
Match: A0A0B0MSH9 (E3 ubiquitin-protein ligase MARCH2 OS=Gossypium arboreum OX=29729 GN=LOC108455880 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-48
Identity = 98/144 (68.06%), Postives = 112/144 (77.78%), Query Frame = 0

Query: 25  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIR 84
           SG  E+K     +E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIR
Sbjct: 84  SGANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIR 143

Query: 85  GNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRV 144
           GNKTCEICHSI RNV+  +E+E  EQP+E+N+ T   A  A S AA+ +  R+FWH HR 
Sbjct: 144 GNKTCEICHSIARNVVGVNEVESTEQPNETNSST---ATTAVSGAASYTESRSFWHGHRF 203

Query: 145 LNFLLVCMVFAFVISWLFHFNMPS 167
           LNFLL CMVFAFVISWLFHFN+PS
Sbjct: 204 LNFLLACMVFAFVISWLFHFNVPS 224

BLAST of HG10017254 vs. ExPASy TrEMBL
Match: A0A2P5YEN9 (RING-CH-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G171900v1 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-48
Identity = 98/144 (68.06%), Postives = 112/144 (77.78%), Query Frame = 0

Query: 25  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIR 84
           SG  E+K     +E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIR
Sbjct: 84  SGANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIR 143

Query: 85  GNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRV 144
           GNKTCEICHSI RNV+  +E+E  EQP+E+N+ T   A  A S AA+ +  R+FWH HR 
Sbjct: 144 GNKTCEICHSIARNVVGVNEVESTEQPNETNSST---ATTAVSGAASYTESRSFWHGHRF 203

Query: 145 LNFLLVCMVFAFVISWLFHFNMPS 167
           LNFLL CMVFAFVISWLFHFN+PS
Sbjct: 204 LNFLLACMVFAFVISWLFHFNVPS 224

BLAST of HG10017254 vs. ExPASy TrEMBL
Match: A0A1U8HUU1 (uncharacterized protein LOC107889748 OS=Gossypium hirsutum OX=3635 GN=LOC107889748 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-48
Identity = 98/144 (68.06%), Postives = 112/144 (77.78%), Query Frame = 0

Query: 25  SGVGEVK--KVNLERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIR 84
           SG  E+K     +E+DCRICHLGLESNS E G  IELGC CK+DL AAHKHCAEAWFKIR
Sbjct: 84  SGANELKLHLAKVEKDCRICHLGLESNSHESGAPIELGCSCKDDLAAAHKHCAEAWFKIR 143

Query: 85  GNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRV 144
           GNKTCEICHSI RNV+  +E+E  EQP+E+N+ T   A  A S AA+ +  R+FWH HR 
Sbjct: 144 GNKTCEICHSIARNVVGVNEVESTEQPNETNSST---ATTAVSGAASYTESRSFWHGHRF 203

Query: 145 LNFLLVCMVFAFVISWLFHFNMPS 167
           LNFLL CMVFAFVISWLFHFN+PS
Sbjct: 204 LNFLLACMVFAFVISWLFHFNVPS 224

BLAST of HG10017254 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-39
Identity = 77/131 (58.78%), Postives = 94/131 (71.76%), Query Frame = 0

Query: 36  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVR 95
           ERDCRICH+ L++ + E GV IELGC CK DL AAHKHCAE WFKI+GNK CE+C SI  
Sbjct: 76  ERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAG 135

Query: 96  NVMVAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFV 155
           NV+ + E+E  E  +E+ NG  ++ +  +        GR+FW  HR LNFLL CMVFAFV
Sbjct: 136 NVVGSVEVESEESRNEA-NGVENLTLRTSGPRLVE--GRSFWQGHRFLNFLLACMVFAFV 195

Query: 156 ISWLFHFNMPS 167
           ISWLFHFN+PS
Sbjct: 196 ISWLFHFNVPS 203

BLAST of HG10017254 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-33
Identity = 72/132 (54.55%), Postives = 85/132 (64.39%), Query Frame = 0

Query: 36  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVR 95
           E+DCRICHLGLES+  E G  + LGC CK+DLG  HK CA+ WFKI+GNKTCEIC SI +
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 96  NVM-VAHELEQMEQPHESNNGTVSMAMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAF 155
           N   V +E+ Q     E+N   V        VA + S  R     +R LNFLL CMV AF
Sbjct: 135 NFFKVDNEIGQTTV--ETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAF 194

Query: 156 VISWLFHFNMPS 167
           VISW FHFN+PS
Sbjct: 195 VISWFFHFNLPS 204

BLAST of HG10017254 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 9.1e-31
Identity = 69/137 (50.36%), Postives = 86/137 (62.77%), Query Frame = 0

Query: 36  ERDCRICHLGLESNSSEFGVGIELGCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVR 95
           E+DCRICHLG+E++    G  IELGC CK+DL  AH+ CAE WFKI+G+KTCEIC S+ R
Sbjct: 81  EKDCRICHLGVETSG---GGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 96  NVMVAHEL--EQMEQPHESNNGTVSMAMVAASVAAAPSGG----RNFWHVHRVLNFLLVC 155
           NV  A+E+    ME+  E  NG           AA   GG     N W   RV+N +L C
Sbjct: 141 NVGGANEMVGSTMEE-RELRNG--------EETAAGEGGGATVVENRWQPQRVVNLVLAC 200

Query: 156 MVFAFVISWLFHFNMPS 167
           MVF F ISW+FHF++ S
Sbjct: 201 MVFGFFISWIFHFHVSS 205

BLAST of HG10017254 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 6.8e-26
Identity = 68/165 (41.21%), Postives = 82/165 (49.70%), Query Frame = 0

Query: 31  KKVNLERDCRICHLGLESNSSE-------------------------------FGVGIEL 90
           KK    RDCRICHL LE+N                                  +G+ ++L
Sbjct: 73  KKKKGGRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQL 132

Query: 91  GCCCKNDLGAAHKHCAEAWFKIRGNKTCEICHSIVRNVMVAHELEQMEQPHESNNGTVSM 150
           GC CK DLG AH  CAE WFKI+GN TCEIC ++  NV       +   P ES   T S 
Sbjct: 133 GCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNV-----AGEQSNP-ESTASTHSQ 192

Query: 151 AMVAASVAAAPSGGRNFWHVHRVLNFLLVCMVFAFVISWLFHFNM 165
           A  AA  +   +  R  WH   V+NFLL  MVFAFV+SWLFHF +
Sbjct: 193 A--AAGQSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

BLAST of HG10017254 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 42/82 (51.22%), Postives = 48/82 (58.54%), Query Frame = 0

Query: 25  SGVGEVKKVNLERDCRICHLGLESNSSEFGVG-------IELGCCCKNDLGAAHKHCAEA 84
           SGVG       ER CRICH G + +    G         IE+GC CKN+LG AH HCAEA
Sbjct: 95  SGVG-------ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEA 154

Query: 85  WFKIRGNKTCEICHSIVRNVMV 100
           WFK+RGN  CEIC    +NV V
Sbjct: 155 WFKLRGNSVCEICGCTAKNVTV 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883458.16.0e-7788.62uncharacterized protein LOC120074413 [Benincasa hispida][more]
KAG7027374.13.8e-6378.31hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6595366.11.4e-6277.71hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023517920.19.4e-6277.11uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022151515.12.8e-5870.06uncharacterized protein LOC111019441, partial [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DBE41.4e-5870.06uncharacterized protein LOC111019441 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6A3CP991.5e-4968.75Laccase-8-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002942pilonHSYRG0000... [more]
A0A0B0MSH92.2e-4868.06E3 ubiquitin-protein ligase MARCH2 OS=Gossypium arboreum OX=29729 GN=LOC10845588... [more]
A0A2P5YEN92.2e-4868.06RING-CH-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_... [more]
A0A1U8HUU12.2e-4868.06uncharacterized protein LOC107889748 OS=Gossypium hirsutum OX=3635 GN=LOC1078897... [more]
Match NameE-valueIdentityDescription
AT5G05830.11.8e-3958.78RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G01070.21.5e-3354.55RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G37950.19.1e-3150.36RING/FYVE/PHD zinc finger superfamily protein [more]
AT5G59000.16.8e-2641.21RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G34200.11.7e-1651.22RING/FYVE/PHD zinc finger superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 38..91
e-value: 1.7E-12
score: 57.5
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 39..90
e-value: 9.7E-8
score: 32.0
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 31..97
score: 17.357283
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 26..100
e-value: 1.4E-13
score: 52.2
NoneNo IPR availablePANTHERPTHR46214:SF5OS01G0850200 PROTEINcoord: 25..166
NoneNo IPR availablePANTHERPTHR46214ZINC FINGER, RING-CH-TYPEcoord: 25..166
NoneNo IPR availableCDDcd16495RING_CH-C4HC3_MARCHcoord: 39..91
e-value: 6.69312E-11
score: 52.7148
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 36..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017254.1HG10017254.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding