|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATATAGAGTCGACAAACATCACATCCATAAACCCAAATAGACGAACAATCCGTTCTACAAACAACACACCTTCCAAAGGGAAGCTTTTGGAGGTTCAAAGAATGGTTGTGATCGATATCATGGTCAATCTGTTGCGGGAGTTGAGTGCAAAGTGGGTGAGTGTCGAAGCCGCAGTGATTGCAGCAGTAGAAGAGGCCGTCGATGGGGTCGAGGCAGATGTCACAGAACCGCTGGCTGAGGGGTTGGATGTTCAAAGTGAGAGGGTGGTGGTGGATGAAAGATGA mRNA sequence ATGAATATAGAGTCGACAAACATCACATCCATAAACCCAAATAGACGAACAATCCGTTCTACAAACAACACACCTTCCAAAGGGAAGCTTTTGGAGGTTCAAAGAATGGTTGTGATCGATATCATGGTCAATCTGTTGCGGGAGTTGAGTGCAAAGTGGGTGAGTGTCGAAGCCGCAGTGATTGCAGCAGTAGAAGAGGCCGTCGATGGGGTCGAGGCAGATGTCACAGAACCGCTGGCTGAGGGGTTGGATGTTCAAAGTGAGAGGGTGGTGGTGGATGAAAGATGA Coding sequence (CDS) ATGAATATAGAGTCGACAAACATCACATCCATAAACCCAAATAGACGAACAATCCGTTCTACAAACAACACACCTTCCAAAGGGAAGCTTTTGGAGGTTCAAAGAATGGTTGTGATCGATATCATGGTCAATCTGTTGCGGGAGTTGAGTGCAAAGTGGGTGAGTGTCGAAGCCGCAGTGATTGCAGCAGTAGAAGAGGCCGTCGATGGGGTCGAGGCAGATGTCACAGAACCGCTGGCTGAGGGGTTGGATGTTCAAAGTGAGAGGGTGGTGGTGGATGAAAGATGA Protein sequence MNIESTNITSINPNRRTIRSTNNTPSKGKLLEVQRMVVIDIMVNLLRELSAKWVSVEAAVIAAVEEAVDGVEADVTEPLAEGLDVQSERVVVDER
Homology
BLAST of HG10017202 vs. ExPASy TrEMBL
Match: A0A0A0KXM9 (DNA polymerase, beta-like region OS=Cucumis sativus OX=3659 GN=Csa_4G297430 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.7e-11 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 1 MNIESTNITSINPNRRTIRSTNNTPSKGKLLEVQRMVVIDIMVNLLRELSAKWVSVEAAV 60
MNI+STN+ +INP RRTI N ++G+L E + M +D + LLREL AKW+ +E AV
Sbjct: 60 MNIDSTNVAAINPERRTILFANRASARGELAEGEFMAAVDEVAELLRELGAKWMDIEVAV 119
Query: 61 IAAVEEAVDGVEADVTEPLAEGLDVQSERVVVDE 95
IAAVE AVDG AD+ + +D QS+ V V++
Sbjct: 120 IAAVEHAVDGFTADIAAAMVHLVD-QSKAVGVEK 152
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KXM9 | 2.7e-11 | 48.94 | DNA polymerase, beta-like region OS=Cucumis sativus OX=3659 GN=Csa_4G297430 PE=4... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..26 |
Relationships
The following mRNA feature(s) are a part of this gene:
|
