HG10017148 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017148
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Actin-depolymerizing factor
Location	Chr03: 11420015 .. 11420508 (+)
RNA-Seq Expression	HG10017148
Synteny	HG10017148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTGAATGATGAATGTAAGTTAAAGTTCTTGGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTAGTCGTGGAGAAACTTGGTGGGCCTAGCCAAAGTTATGAAGATTTTGCTGCTAGTCTCCCTGCCGACGAGTGTCGTTATGCTGTCTATGATTTCGACTTTGTCACAGAAGAAAATTGCCAAAAAAGCAGGATTTTCTTCATTGCATGGTAATGACAATTTCTCAGTTTCTCCACTCATAGTTATTTCATTCATTCAATGTTTGCATACTTCATCTGTTCACTGATTGAACTGTTAAATGAAGGTCTCCTGATAATTCAAGGGTTAGAAGCAAGATGATATATGCAAGCTCCAAGGACCGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGTGCCAACTGA

mRNA sequence

ATGGCTGTGAATGATGAATGTAAGTTAAAGTTCTTGGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTAGTCGTGGAGAAACTTGGTGGGCCTAGCCAAAGTTATGAAGATTTTGCTGCTAGTCTCCCTGCCGACGAGTGTCGTTATGCTGTCTATGATTTCGACTTTGTCACAGAAGAAAATTGCCAAAAAAGCAGGATTTTCTTCATTGCATGGTCTCCTGATAATTCAAGGGTTAGAAGCAAGATGATATATGCAAGCTCCAAGGACCGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGTGCCAACTGA

Coding sequence (CDS)

ATGGCTGTGAATGATGAATGTAAGTTAAAGTTCTTGGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTAGTCGTGGAGAAACTTGGTGGGCCTAGCCAAAGTTATGAAGATTTTGCTGCTAGTCTCCCTGCCGACGAGTGTCGTTATGCTGTCTATGATTTCGACTTTGTCACAGAAGAAAATTGCCAAAAAAGCAGGATTTTCTTCATTGCATGGTCTCCTGATAATTCAAGGGTTAGAAGCAAGATGATATATGCAAGCTCCAAGGACCGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGTGCCAACTGA

Protein sequence

MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRAN

Homology

[Close]

BLAST of HG10017148 vs. NCBI nr
Match: XP_038881191.1 (actin-depolymerizing factor 1-like isoform X4 [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 3.5e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 121 EMGLDVIRSRAN 132

[Close]

BLAST of HG10017148 vs. NCBI nr
Match: XP_038881187.1 (actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida] >XP_038881188.1 actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 3.5e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 11  MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 70

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 71  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 130

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 131 EMGLDVIRSRAN 142

[Close]

BLAST of HG10017148 vs. NCBI nr
Match: XP_038881189.1 (actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.1 actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 3.5e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 8   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 128 EMGLDVIRSRAN 139

[Close]

BLAST of HG10017148 vs. NCBI nr
Match: XP_038881186.1 (actin-depolymerizing factor 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 3.5e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 56  MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 115

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 116 AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 175

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 176 EMGLDVIRSRAN 187

[Close]

BLAST of HG10017148 vs. NCBI nr
Match: XP_022972737.1 (actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 8   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 128 EMGLDVIRSRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 6.6e-61
Identity = 114/132 (86.36%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P++SYEDFAASLP +ECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVT ENCQKSRIFFIAW PD +RVRSKMIYASSKDRFKRELDGIQVELQA DPT
Sbjct: 68  AVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLDVI+SRAN
Sbjct: 128 EMGLDVIQSRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-59
Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKLKFLELK+KRT+RFI++KIEEK K+VVVEKLG P++SYEDF A LPADECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDF+T+EN QKSRIFFIAWSPD +RVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRA 132
           EMGLDV RSRA
Sbjct: 128 EMGLDVFRSRA 138

[Close]

BLAST of HG10017148 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-59
Identity = 110/132 (83.33%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+DECKLKFLELK+KRT+RFI++KI+EK K VVVEK+G P  +Y+DFAASLPA+ECRY
Sbjct: 8   MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A++D+DFVTEENCQKS+IFFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           E+GLDVIR RAN
Sbjct: 128 EVGLDVIRGRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-59
Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P Q+YE+FAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EM LDV RSRAN
Sbjct: 128 EMDLDVFRSRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 227.6 bits (579), Expect = 8.0e-59
Identity = 109/132 (82.58%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQV+VEK+G P  +YEDFAASLPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EM LDV++SR N
Sbjct: 128 EMDLDVLKSRVN 139

[Close]

BLAST of HG10017148 vs. ExPASy TrEMBL
Match: A0A6J1I5N8 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.9e-67
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 8   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 128 EMGLDVIRSRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy TrEMBL
Match: A0A6J1HFY8 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.3e-67
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY
Sbjct: 8   MAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLD+IRSRAN
Sbjct: 128 EMGLDIIRSRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy TrEMBL
Match: A0A6J1GD54 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.2e-66
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASLP DECRY
Sbjct: 8   MAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLPTDECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRA 132
           EMGLDVIRSRA
Sbjct: 128 EMGLDVIRSRA 138

[Close]

BLAST of HG10017148 vs. ExPASy TrEMBL
Match: A0A0A0KX62 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-66
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPA+ECRY
Sbjct: 8   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPANECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLDVIRSRAN
Sbjct: 128 EMGLDVIRSRAN 139

[Close]

BLAST of HG10017148 vs. ExPASy TrEMBL
Match: A0A6J1IRV5 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.0e-66
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAVNDECKLKFLELK+KRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASLP DECRY
Sbjct: 8   MAVNDECKLKFLELKTKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLPTDECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRA 132
           EMGLDVIRSRA
Sbjct: 128 EMGLDVIRSRA 138

[Close]

BLAST of HG10017148 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-60
Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P Q+YE+FAA LPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EM LDV RSRAN
Sbjct: 128 EMDLDVFRSRAN 139

[Close]

BLAST of HG10017148 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-60
Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P Q+YE+FAA LPADECRY
Sbjct: 19  MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 78

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 79  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 138

Query: 121 EMGLDVIRSRAN 133
           EM LDV RSRAN
Sbjct: 139 EMDLDVFRSRAN 150

[Close]

BLAST of HG10017148 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-60
Identity = 109/132 (82.58%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQV+VEK+G P  +YEDFAASLPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EM LDV++SR N
Sbjct: 128 EMDLDVLKSRVN 139

[Close]

BLAST of HG10017148 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-60
Identity = 109/132 (82.58%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQV+VEK+G P  +YEDFAASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
           A+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 121 EMGLDVIRSRAN 133
           EM LDV++SR N
Sbjct: 121 EMDLDVLKSRVN 132

[Close]

BLAST of HG10017148 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-57
Identity = 106/132 (80.30%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPADECRY 60
           MAV+D+CKLKF+ELK+KRT R IV+KIE+  KQV+VEKLG P QSY+DFAASLPAD+CRY
Sbjct: 8   MAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASLPADDCRY 67

Query: 61  AVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPT 120
            +YDFDFVT ENCQKS+IFFIAWSPD ++VR KMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 68  CIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMGLDVIRSRAN 133
           EMGLDV +SR N
Sbjct: 128 EMGLDVFKSRTN 137

The following BLAST results are available for this feature:

BLAST of HG10017148 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881191.1	3.5e-67	100.00	actin-depolymerizing factor 1-like isoform X4 [Benincasa hispida]	[more]
XP_038881187.1	3.5e-67	100.00	actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida] >XP_038881188....	[more]
XP_038881189.1	3.5e-67	100.00	actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190....	[more]
XP_038881186.1	3.5e-67	100.00	actin-depolymerizing factor 1-like isoform X1 [Benincasa hispida]	[more]
XP_022972737.1	1.0e-66	99.24	actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depo...	[more]

BLAST of HG10017148 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI2	6.6e-61	86.36	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9FVI1	1.2e-59	85.50	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q0DLA3	2.1e-59	83.33	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]
Q39250	2.8e-59	84.09	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9ZSK3	8.0e-59	82.58	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]

BLAST of HG10017148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5N8	4.9e-67	99.24	actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 P...	[more]
A0A6J1HFY8	8.3e-67	97.73	actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208...	[more]
A0A6J1GD54	3.2e-66	98.47	actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110...	[more]
A0A0A0KX62	5.4e-66	97.73	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 ...	[more]
A0A6J1IRV5	7.0e-66	97.71	actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 P...	[more]

BLAST of HG10017148 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	2.0e-60	84.09	actin depolymerizing factor 1	[more]
AT3G46010.2	2.0e-60	84.09	actin depolymerizing factor 1	[more]
AT5G59890.1	5.7e-60	82.58	actin depolymerizing factor 4	[more]
AT5G59890.2	5.7e-60	82.58	actin depolymerizing factor 4	[more]
AT3G46000.1	1.2e-57	80.30	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 5..132 e-value: 4.4E-60 score: 215.6
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 7..129 e-value: 2.2E-37 score: 127.6
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 1..132 score: 39.166016
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..132 e-value: 5.1E-50 score: 170.8
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..132
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 1..131 e-value: 1.6732E-64 score: 190.461
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..132
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017148.1	HG10017148.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding