HG10017117 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017117
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein MODIFIER OF SNC1 11-like
Location	Chr03: 11168942 .. 11170747 (+)
RNA-Seq Expression	HG10017117
Synteny	HG10017117

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGGTAGCATCTGCAGGACTTAATGACATTAGCAACAGCAAGAATCCGCTTGGAGAAAACCCAAGTCAAACCCTAGACCCGACGATTTCTTCCTCGGCCCAGCCTCCTGCCTCCGTTCCGCCTTCGTCAACTGATGGCGGGTCATCAAAGGAAAGGGATGAATCCAAGGGCCCCGGCAAGGCGTCGGTTGAAGATGATGGTGCACCGGTTACTGATGTCCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGGATTTCAGTGCAATTGTCTGAAGAAGAAAAGCGTAATTCTCGAGCGGAACGGTGAGTCTATTTCTTGGTTATCGGCCTTCGTCGCATGCCTGTGCTCGTTCTTGTCTTGTTGCGTATTTGAATCTATCTCTCTTGGGAGATCATGCCCTTCTGCATAGTTTGTTTCCTTTGATTGTTTTGAATCTAGATGTTTTTATTTATTTTTACGGACAAATGTAGTGATAAGTCACTGGTATAAATATTACATTTCTATCTCATAAACTGCCTGAGTAGGGACTTTAACAAACCACCCAAAAATTCATGTATCTCCCGTCATATGTTAGACCGAGGATTTGCTTGTGTAGTTACGAGGTTATTTGGAACTTGTAAGTTATGGTTTTGTGGAGCATATCAACCCTGTATCGTTATTTAGTCCTATGTTTAGGTTTTAGTGCCCAATCTAATTGTTCATATTCGGGCAATGGCTTGAAATTCTAATTGGAATGGCATATATATATTTGAAACCCAAAATGATTGCAGTGGCTTATTTTTATATGTCAAAAGTTATATCTATGTTAAAAAAAAAAAAAAAAAAGAGAGGAAAGTTGAAGCCCTTTCTCTCTTTCCTGTCCCTTCTCAAGTGAACTTTGGAACGATGTGCAATGCTCTTTCAGTCTTTCTCGGGGCTTACAGAATTGTGCCTCGCACACAAAGCAGCTAAACCGTTGTACTTTCATAATTACGATCTTCGTGTCGTGGTTTTGTCTTGTCTATAGTGTCTTGTGGAATTTTGGTTGGAAAGAGCTGCTAAAATCTTCGAAGATAAGTTATAAAATTGACACACCGTGTGGGAATTAATTCTTTTTCGGGCTCGTATTGGTGTTCTCTGTCTTCTTGTTTCTATAATTTAAATATTCACACTTTTCTTTCCTTTTCCAAGTTATGTTGAGAGCCATGTTTCTCTTTTAGTTTTCCGTCAAATATCTTTAATGTCGATTGCTGGGGATAATTGCAGATTTGGTATGGGTTCCACAACTAATGGATTGGGAGCATCTAATAAGACGGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGGTATTTATCATTTCTTTATGTATTGATTGCTCACCCTGTCAAAGAAATTGTATTTATTGTCTTTTACTCAGTTAACTTTTCTTTCAAACTTTTGCCCCCTTTTTTTGGTTATTTAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACCCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTAGTGGGCTTGGATTTTTGTTTCCCTGGTTGTAGCGAATTGAAATGCTTCCAGTTCTATCATCTGTGGTTCATGGAGGTCTTGTATGGAGTCTATAAACATTAGAATGCATCTAACATATTGTTTGTTTTTCCCTTTATTTTCTGGGTGAAGGTTTTCTAATCCAACATCAAACTCTCTCACACAAGTGGATGGGAAAGGAAACGTTGAGACGGTAATGTTATCCTTTTAA

mRNA sequence

ATGGCGACGGTAGCATCTGCAGGACTTAATGACATTAGCAACAGCAAGAATCCGCTTGGAGAAAACCCAAGTCAAACCCTAGACCCGACGATTTCTTCCTCGGCCCAGCCTCCTGCCTCCGTTCCGCCTTCGTCAACTGATGGCGGGTCATCAAAGGAAAGGGATGAATCCAAGGGCCCCGGCAAGGCGTCGGTTGAAGATGATGGTGCACCGGTTACTGATGTCCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGGATTTCAGTGCAATTGTCTGAAGAAGAAAAGCGTAATTCTCGAGCGGAACGATTTGGTATGGGTTCCACAACTAATGGATTGGGAGCATCTAATAAGACGGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACCCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACATCAAACTCTCTCACACAAGTGGATGGGAAAGGAAACGTTGAGACGGTAATGTTATCCTTTTAA

Coding sequence (CDS)

ATGGCGACGGTAGCATCTGCAGGACTTAATGACATTAGCAACAGCAAGAATCCGCTTGGAGAAAACCCAAGTCAAACCCTAGACCCGACGATTTCTTCCTCGGCCCAGCCTCCTGCCTCCGTTCCGCCTTCGTCAACTGATGGCGGGTCATCAAAGGAAAGGGATGAATCCAAGGGCCCCGGCAAGGCGTCGGTTGAAGATGATGGTGCACCGGTTACTGATGTCCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGGATTTCAGTGCAATTGTCTGAAGAAGAAAAGCGTAATTCTCGAGCGGAACGATTTGGTATGGGTTCCACAACTAATGGATTGGGAGCATCTAATAAGACGGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACCCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACATCAAACTCTCTCACACAAGTGGATGGGAAAGGAAACGTTGAGACGGTAATGTTATCCTTTTAA

Protein sequence

MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGPGKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTEEVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNSLTQVDGKGNVETVMLSF

Homology

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BLAST of HG10017117 vs. NCBI nr
Match: XP_038882639.1 (protein MODIFIER OF SNC1 11 [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 5.9e-87
Identity = 182/193 (94.30%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVASAGLNDISNSK+PLGENPSQTLDPTISSSAQPPASVP SSTDGGSSK+RDESKG 
Sbjct: 1   MATVASAGLNDISNSKSPLGENPSQTLDPTISSSAQPPASVPSSSTDGGSSKDRDESKGS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
           GKASVE DGAPV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+ TNGLGASNKTE
Sbjct: 61  GKASVEGDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTATNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETV 194
            TQ+DGKGNVET+
Sbjct: 181 PTQMDGKGNVETI 193

[Close]

BLAST of HG10017117 vs. NCBI nr
Match: XP_031740008.1 (protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein Csa_017918 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 6.5e-86
Identity = 181/193 (93.78%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVA AGLNDISNSKNPLGENPSQTL+ TISSSAQPPASVPPSSTDGGSSKE DESK  
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
           GK S EDDGAPV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNKTE
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETV 194
           LTQVDGKGNVET+
Sbjct: 181 LTQVDGKGNVETI 193

[Close]

BLAST of HG10017117 vs. NCBI nr
Match: XP_008447291.1 (PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein MODIFIER OF SNC1 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 323.9 bits (829), Expect = 9.4e-85
Identity = 179/193 (92.75%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVA AGLNDISNSKNPLGENPSQTL+PTISSSAQ PASVPPSSTDGGSSKE DESK  
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
           GK S  DDGAPV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNKTE
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETV 194
           +TQVDGKGNVET+
Sbjct: 181 VTQVDGKGNVETI 193

[Close]

BLAST of HG10017117 vs. NCBI nr
Match: XP_022949856.1 (protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949858.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >KAG6603695.1 Protein MODIFIER OF SNC1 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033871.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.8 bits (813), Expect = 6.7e-83
Identity = 175/193 (90.67%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVASAG+NDISNSKNPLGENPSQTLDPTISSSAQPP SVP SSTDGGSSKE DESKG 
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
            K SVE DG PV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETV 194
           LTQVDGKGN+ET+
Sbjct: 181 LTQVDGKGNIETI 193

[Close]

BLAST of HG10017117 vs. NCBI nr
Match: XP_022977777.1 (protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977779.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima])

HSP 1 Score: 315.1 bits (806), Expect = 4.3e-82
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVASAG+NDISNSKN LGENPSQTLDPTISSSAQPP SVP SSTDGGSSKE DESKG 
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
            K SVE DG PV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETV 194
           LTQVDGKGN+ET+
Sbjct: 181 LTQVDGKGNIETI 193

[Close]

BLAST of HG10017117 vs. ExPASy Swiss-Prot
Match: Q9LZ08 (Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.4e-27
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 20  GENPSQTLDPTISSSAQPPASVP---PSSTDGGSSKERDESKGPGKASVEDDG--APVTD 79
           GENP + +D   +   +    +       +D G  KE  +S G G  +  D G  +PV D
Sbjct: 21  GENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEETDSNGIGSTAGVDSGDISPVDD 80

Query: 80  VQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGSTTNGLGASNKTEEVKRKARAERFG 139
           +Q+K+RRAERFG+SV+L+EEEKRNSRAERFG    +  NG   + K EE+KRKARA+RFG
Sbjct: 81  IQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELKRKARADRFG 140

Query: 140 L-SASVTTD---DEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTS 179
           + SA+ TTD   +EAKKKARLARF   +K D  EE KRKARA+RFS   S
Sbjct: 141 VPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALRFSKEAS 190

[Close]

BLAST of HG10017117 vs. ExPASy Swiss-Prot
Match: P82979 (SAP domain-containing ribonucleoprotein OS=Homo sapiens OX=9606 GN=SARNP PE=1 SV=3)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 46/114 (40.35%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 72  VTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGST-TNGLGASNK--TEEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ S  T GL + NK      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of HG10017117 vs. ExPASy Swiss-Prot
Match: Q5R4V4 (SAP domain-containing ribonucleoprotein OS=Pongo abelii OX=9601 GN=SARNP PE=2 SV=3)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 46/114 (40.35%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 72  VTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGST-TNGLGASNK--TEEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ S  T GL + NK      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of HG10017117 vs. ExPASy Swiss-Prot
Match: Q9D1J3 (SAP domain-containing ribonucleoprotein OS=Mus musculus OX=10090 GN=Sarnp PE=1 SV=3)

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-04
Identity = 45/114 (39.47%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 72  VTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGST-TNGLGASNK--TEEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ S  T GL +  K      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of HG10017117 vs. ExPASy Swiss-Prot
Match: Q498U4 (SAP domain-containing ribonucleoprotein OS=Rattus norvegicus OX=10116 GN=Sarnp PE=1 SV=3)

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-04
Identity = 45/114 (39.47%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 72  VTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGST-TNGLGASNK--TEEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ S  T GL +  K      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of HG10017117 vs. ExPASy TrEMBL
Match: A0A0A0L0R4 (Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293070 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.1e-86
Identity = 181/193 (93.78%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVA AGLNDISNSKNPLGENPSQTL+ TISSSAQPPASVPPSSTDGGSSKE DESK  
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
           GK S EDDGAPV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNKTE
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETV 194
           LTQVDGKGNVET+
Sbjct: 181 LTQVDGKGNVETI 193

[Close]

BLAST of HG10017117 vs. ExPASy TrEMBL
Match: A0A5A7TZD8 (Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001340 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.5e-85
Identity = 179/193 (92.75%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVA AGLNDISNSKNPLGENPSQTL+PTISSSAQ PASVPPSSTDGGSSKE DESK  
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
           GK S  DDGAPV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNKTE
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETV 194
           +TQVDGKGNVET+
Sbjct: 181 VTQVDGKGNVETI 193

[Close]

BLAST of HG10017117 vs. ExPASy TrEMBL
Match: A0A1S3BHQ8 (protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.5e-85
Identity = 179/193 (92.75%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVA AGLNDISNSKNPLGENPSQTL+PTISSSAQ PASVPPSSTDGGSSKE DESK  
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
           GK S  DDGAPV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNKTE
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETV 194
           +TQVDGKGNVET+
Sbjct: 181 VTQVDGKGNVETI 193

[Close]

BLAST of HG10017117 vs. ExPASy TrEMBL
Match: A0A6J1GD78 (protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.2e-83
Identity = 175/193 (90.67%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVASAG+NDISNSKNPLGENPSQTLDPTISSSAQPP SVP SSTDGGSSKE DESKG 
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
            K SVE DG PV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETV 194
           LTQVDGKGN+ET+
Sbjct: 181 LTQVDGKGNIETI 193

[Close]

BLAST of HG10017117 vs. ExPASy TrEMBL
Match: A0A6J1IR28 (protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 174/193 (90.16%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPASVPPSSTDGGSSKERDESKGP 60
           MATVASAG+NDISNSKN LGENPSQTLDPTISSSAQPP SVP SSTDGGSSKE DESKG 
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  GKASVEDDGAPVTDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGSTTNGLGASNKTE 120
            K SVE DG PV+DVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG+TTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETV 194
           LTQVDGKGN+ET+
Sbjct: 181 LTQVDGKGNIETI 193

[Close]

BLAST of HG10017117 vs. TAIR 10
Match: AT5G02770.1 (unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-28
Identity = 86/170 (50.59%), Postives = 110/170 (64.71%), Query Frame = 0


Query: 20  GENPSQTLDPTISSSAQPPASVP---PSSTDGGSSKERDESKGPGKASVEDDG--APVTD 79
           GENP + +D   +   +    +       +D G  KE  +S G G  +  D G  +PV D
Sbjct: 21  GENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEETDSNGIGSTAGVDSGDISPVDD 80

Query: 80  VQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGSTTNGLGASNKTEEVKRKARAERFG 139
           +Q+K+RRAERFG+SV+L+EEEKRNSRAERFG    +  NG   + K EE+KRKARA+RFG
Sbjct: 81  IQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELKRKARADRFG 140

Query: 140 L-SASVTTD---DEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTS 179
           + SA+ TTD   +EAKKKARLARF   +K D  EE KRKARA+RFS   S
Sbjct: 141 VPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALRFSKEAS 190

The following BLAST results are available for this feature:

BLAST of HG10017117 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882639.1	5.9e-87	94.30	protein MODIFIER OF SNC1 11 [Benincasa hispida]	[more]
XP_031740008.1	6.5e-86	93.78	protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein C...	[more]
XP_008447291.1	9.4e-85	92.75	PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein...	[more]
XP_022949856.1	6.7e-83	90.67	protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MO...	[more]
XP_022977777.1	4.3e-82	90.16	protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODI...	[more]

BLAST of HG10017117 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ08	5.4e-27	50.59	Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1	[more]
P82979	1.3e-04	40.35	SAP domain-containing ribonucleoprotein OS=Homo sapiens OX=9606 GN=SARNP PE=1 SV...	[more]
Q5R4V4	1.3e-04	40.35	SAP domain-containing ribonucleoprotein OS=Pongo abelii OX=9601 GN=SARNP PE=2 SV...	[more]
Q9D1J3	6.4e-04	39.47	SAP domain-containing ribonucleoprotein OS=Mus musculus OX=10090 GN=Sarnp PE=1 S...	[more]
Q498U4	6.4e-04	39.47	SAP domain-containing ribonucleoprotein OS=Rattus norvegicus OX=10116 GN=Sarnp P...	[more]

BLAST of HG10017117 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0R4	3.1e-86	93.78	Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29307...	[more]
A0A5A7TZD8	4.5e-85	92.75	Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BHQ8	4.5e-85	92.75	protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV...	[more]
A0A6J1GD78	3.2e-83	90.67	protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 P...	[more]
A0A6J1IR28	2.1e-82	90.16	protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=...	[more]

BLAST of HG10017117 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02770.1	3.8e-28	50.59	unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040746	THO1_MOS11, C-terminal domain	PFAM	PF18592	Tho1_MOS11_C	coord: 73..105 e-value: 2.6E-11 score: 43.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 6..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..63
IPR044209	Protein MODIFIER OF SNC1 11	PANTHER	PTHR47701	PROTEIN MODIFIER OF SNC1 11	coord: 17..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017117.1	HG10017117.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005634	nucleus