HG10017057 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017057
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin-responsive protein SAUR40-like
Location	Chr03: 10656135 .. 10656512 (+)
RNA-Seq Expression	HG10017057
Synteny	HG10017057

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTAAGGTTATTCACCGCTCTCCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAAACCTGAAAGTTTTGACGAAGAATTCGAAGCAGCAGTTACGGTACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGATGGTGATGAGAGAAGGAGGTTTGTCATTAATTTAGAGTTCCTGTCTAACCCTGAATTCTTAAGGCTATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCGGCCTGAGGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAAAACGGGGAGTGGATTGCATCTAGTGTTCATATCATAACTAGCTATTAG

mRNA sequence

ATGATGCTAAGGTTATTCACCGCTCTCCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAAACCTGAAAGTTTTGACGAAGAATTCGAAGCAGCAGTTACGGTACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGATGGTGATGAGAGAAGGAGGCTATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCGGCCTGAGGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAAAACGGGGAGTGGATTGCATCTAGTGTTCATATCATAACTAGCTATTAG

Coding sequence (CDS)

ATGATGCTAAGGTTATTCACCGCTCTCCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAAACCTGAAAGTTTTGACGAAGAATTCGAAGCAGCAGTTACGGTACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGATGGTGATGAGAGAAGGAGGCTATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCGGCCTGAGGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAAAACGGGGAGTGGATTGCATCTAGTGTTCATATCATAACTAGCTATTAG

Protein sequence

MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVHIITSY

Homology

[Close]

BLAST of HG10017057 vs. NCBI nr
Match: XP_038881209.1 (auxin-responsive protein SAUR71-like [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 103/125 (82.40%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           MML+LF ALLQKSLSPLLSKE KPESFDEEFEAA+TVPKDVEEGHFVVFAVDGDER+   
Sbjct: 1   MMLKLFIALLQKSLSPLLSKESKPESFDEEFEAALTVPKDVEEGHFVVFAVDGDERKRFV 60

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK+GEWIASSVH
Sbjct: 61  INLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCPPEELQKIVEERRKQKSGEWIASSVH 120

[Close]

BLAST of HG10017057 vs. NCBI nr
Match: KAA0063814.1 (auxin-responsive protein SAUR40-like [Cucumis melo var. makuwa] >TYK07310.1 auxin-responsive protein SAUR40-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 102/125 (81.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRL  ALLQKSLSPLLSKEPKPESF EEFEAA TVPKDVEEGHFVVFAVDGDER+   
Sbjct: 1   MKLRLVIALLQKSLSPLLSKEPKPESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFV 60

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQK+GEWIASSVH
Sbjct: 61  INLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKSGEWIASSVH 120

[Close]

BLAST of HG10017057 vs. NCBI nr
Match: XP_031742896.1 (auxin-induced protein 10A5-like [Cucumis sativus] >KAE8647406.1 hypothetical protein Csa_003809 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 6.5e-43
Identity = 100/125 (80.00%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRL  ALLQKSLSPLLSKE + ESF EEFEAA TVPKDVEEGHFVVFAVDGDER+   
Sbjct: 19  MKLRLVIALLQKSLSPLLSKESRHESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFV 78

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH
Sbjct: 79  INLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 138

[Close]

BLAST of HG10017057 vs. NCBI nr
Match: KAG6604402.1 (Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42
Identity = 96/125 (76.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRLF ++LQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEGHFVVFA DGDER+   
Sbjct: 66  MKLRLFISMLQKSLSPLMSKEPKHDSFDEEFDAAVMVPKDVEEGHFVVFAADGDERKRFV 125

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK GEWIASSVH
Sbjct: 126 INLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGEWIASSVH 185

[Close]

BLAST of HG10017057 vs. NCBI nr
Match: XP_023543955.1 (uncharacterized protein LOC111803675 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42
Identity = 96/125 (76.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRLF ++LQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEGHFVVFA DGDER+   
Sbjct: 66  MKLRLFISMLQKSLSPLMSKEPKHDSFDEEFDAAVMVPKDVEEGHFVVFAADGDERKRFV 125

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK GEWIASSVH
Sbjct: 126 INLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGEWIASSVH 185

[Close]

BLAST of HG10017057 vs. ExPASy TrEMBL
Match: A0A5A7V9B1 (Auxin-responsive protein SAUR40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00240 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.7e-45
Identity = 102/125 (81.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRL  ALLQKSLSPLLSKEPKPESF EEFEAA TVPKDVEEGHFVVFAVDGDER+   
Sbjct: 1   MKLRLVIALLQKSLSPLLSKEPKPESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFV 60

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQK+GEWIASSVH
Sbjct: 61  INLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKSGEWIASSVH 120

[Close]

BLAST of HG10017057 vs. ExPASy TrEMBL
Match: A0A0A0KEQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446450 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 100/125 (80.00%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRL  ALLQKSLSPLLSKE + ESF EEFEAA TVPKDVEEGHFVVFAVDGDER+   
Sbjct: 1   MKLRLVIALLQKSLSPLLSKESRHESFYEEFEAAATVPKDVEEGHFVVFAVDGDERKRFV 60

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH
Sbjct: 61  INLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 120

[Close]

BLAST of HG10017057 vs. ExPASy TrEMBL
Match: A0A6J1IPG4 (uncharacterized protein LOC111477631 OS=Cucurbita maxima OX=3661 GN=LOC111477631 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 96/125 (76.80%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRLF ++LQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEGHFVVFA DGDER+   
Sbjct: 66  MKLRLFISMLQKSLSPLMSKEPKHDSFDEEFDAAVMVPKDVEEGHFVVFAADGDERKRFV 125

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK GEWIASSVH
Sbjct: 126 INLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGEWIASSVH 185

[Close]

BLAST of HG10017057 vs. ExPASy TrEMBL
Match: A0A6J1EC89 (uncharacterized protein LOC111433002 OS=Cucurbita moschata OX=3662 GN=LOC111433002 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 95/125 (76.00%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 1   MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR--- 60
           M LRLF ++LQKSLSPL+SKEPK +SFDEEF AAV VPKDVEEGHFVVFA DGDER+   
Sbjct: 66  MKLRLFISMLQKSLSPLMSKEPKHDSFDEEFNAAVMVPKDVEEGHFVVFAADGDERKRFV 125

Query: 61  ------------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNGEWIASSVH 111
                       RLLELAKEEYGFQQKGALTVPC PEELQKIVEERRKQK G WIASSVH
Sbjct: 126 INLKFLSNPAFLRLLELAKEEYGFQQKGALTVPCPPEELQKIVEERRKQKTGGWIASSVH 185

[Close]

BLAST of HG10017057 vs. ExPASy TrEMBL
Match: A0A2N9I624 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47341 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.7e-18
Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 2   MLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERR---- 61
           MLRLF   LQK LS L  +E     F+EE   A  VP DV EGHF VFA+ G+E +    
Sbjct: 16  MLRLFIEKLQKGLSVLAPRETDLNGFNEELVVAAVVPDDVTEGHFAVFAIKGEETKRFVV 75

Query: 62  -----------RLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQKNG 98
                      RLL+ AKEEYGF QKGALTVPCRPEELQKI+++  ++  G
Sbjct: 76  ALVYLTSPAFLRLLDQAKEEYGFTQKGALTVPCRPEELQKILDDGTEKSTG 126

[Close]

BLAST of HG10017057 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-13
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 27  FDEEFEAAVTVPKDVEEGHFVVFAVDGD---------------ERRRLLELAKEEYGFQQ 86
           F+EE  AA  +P DV+EGH  V AV G+               E  RLLE A+EE+GFQ 
Sbjct: 31  FEEEGNAASMIPSDVKEGHVAVIAVKGERIKRFVLELEELNKPEFLRLLEQAREEFGFQP 90

Query: 87  KGALTVPCRPEELQKIVEERRK 94
           +G LT+PC+PEE+QKI++  R+
Sbjct: 91  RGPLTIPCQPEEVQKILQGSRE 112

[Close]

BLAST of HG10017057 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 19  SKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDER-----------------RRLLE 78
           +K+P PE +  +      VPKDV+EGHF V AVDG                    R+LLE
Sbjct: 38  AKKPCPEEYGRD-----CVPKDVKEGHFAVIAVDGYHEPTQRFVVPLMFLEHPMFRKLLE 97

Query: 79  LAKEEYGFQQKGALTVPCRPEELQKIVEER 92
            A+EEYGF   GAL VPCRP  L+ I+ E+
Sbjct: 98  QAEEEYGFYHDGALMVPCRPSHLRMILTEQ 122

[Close]

BLAST of HG10017057 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 44.3 bits (103), Expect = 7.4e-05
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 14  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRR------------ 73
           +SP ++K   + K    DEE   +   P DV +G+  V+   G E RR            
Sbjct: 49  ISPAINKRLLDVKNGDSDEETCQSPEPPHDVPKGNLAVYV--GPELRRFIIPTSYLSHSL 108

Query: 74  ---LLELAKEEYGFQQKGALTVPCRPEELQKIVE 90
              LLE A+EE+GF Q GALT+PC  E  + +++
Sbjct: 109 FKVLLEKAEEEFGFDQSGALTIPCEVETFKYLLK 140

[Close]

BLAST of HG10017057 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 44.3 bits (103), Expect = 7.4e-05
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 14  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRR------------ 73
           +SP ++K   + K    DEE   +   P DV +G+  V+   G E RR            
Sbjct: 49  ISPAINKRLLDVKNGDSDEETCQSPEPPHDVPKGNLAVYV--GPELRRFIIPTSYLSHSL 108

Query: 74  ---LLELAKEEYGFQQKGALTVPCRPEELQKIVE 90
              LLE A+EE+GF Q GALT+PC  E  + +++
Sbjct: 109 FKVLLEKAEEEFGFDQSGALTIPCEVETFKYLLK 140

[Close]

BLAST of HG10017057 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 42.0 bits (97), Expect = 3.7e-04
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 58 RLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG 98
          +LL+ A++EYGF QKG +T+PC  EE   +Q +++  R   NG
Sbjct: 57 QLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNG 99

The following BLAST results are available for this feature:

BLAST of HG10017057 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881209.1	1.1e-45	82.40	auxin-responsive protein SAUR71-like [Benincasa hispida]	[more]
KAA0063814.1	1.2e-44	81.60	auxin-responsive protein SAUR40-like [Cucumis melo var. makuwa] >TYK07310.1 auxi...	[more]
XP_031742896.1	6.5e-43	80.00	auxin-induced protein 10A5-like [Cucumis sativus] >KAE8647406.1 hypothetical pro...	[more]
KAG6604402.1	2.5e-42	76.80	Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543955.1	2.5e-42	76.80	uncharacterized protein LOC111803675 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10017057 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10017057 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9B1	5.7e-45	81.60	Auxin-responsive protein SAUR40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KEQ9	3.1e-43	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446450 PE=3 SV=1	[more]
A0A6J1IPG4	1.2e-42	76.80	uncharacterized protein LOC111477631 OS=Cucurbita maxima OX=3661 GN=LOC111477631...	[more]
A0A6J1EC89	1.3e-41	76.00	uncharacterized protein LOC111433002 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A2N9I624	2.7e-18	51.35	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47341 PE=3 SV=1	[more]

BLAST of HG10017057 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09870.1	3.3e-13	46.34	SAUR-like auxin-responsive protein family	[more]
AT2G28085.1	1.8e-11	43.33	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	7.4e-05	34.04	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	7.4e-05	34.04	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	3.7e-04	44.19	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 58..95
None	No IPR available	PANTHER	PTHR31374:SF19	F8A24.8 PROTEIN	coord: 58..95 coord: 2..58
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 2..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017057.1	HG10017057.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin