HG10016969 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACCGACGGCAAAATCCTCGAATACAAATCCCCCACTAGAGTCTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTCACCCACCATCTCCACCGTACCGCCAAGCTCCTCTCCGGCCACCTCTATTTTCTGATCCCCACGGAAGCAGAGGAGAAAAAGCCGAAAAAGGCAGTCCGGTTTGCGGAACCAGAGAAGGAAATCGGCGGCGGGGTGGTCAGAATAAAAGTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTTGAAAGAGGGGGGATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAATTGCAGAGAATTGGAGGGAGAGGATGAGGAATCGGAGTTGCAGAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCCAGTGTTAG ATGAAAACCGACGGCAAAATCCTCGAATACAAATCCCCCACTAGAGTCTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTCACCCACCATCTCCACCGTACCGCCAAGCTCCTCTCCGGCCACCTCTATTTTCTGATCCCCACGGAAGCAGAGGAGAAAAAGCCGAAAAAGGCAGTCCGGTTTGCGGAACCAGAGAAGGAAATCGGCGGCGGGGTGGTCAGAATAAAAGTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTTGAAAGAGGGGGGATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAATTGCAGAGAATTGGAGGGAGAGGATGAGGAATCGGAGTTGCAGAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCCAGTGTTAG ATGAAAACCGACGGCAAAATCCTCGAATACAAATCCCCCACTAGAGTCTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTCACCCACCATCTCCACCGTACCGCCAAGCTCCTCTCCGGCCACCTCTATTTTCTGATCCCCACGGAAGCAGAGGAGAAAAAGCCGAAAAAGGCAGTCCGGTTTGCGGAACCAGAGAAGGAAATCGGCGGCGGGGTGGTCAGAATAAAAGTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTTGAAAGAGGGGGGATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAATTGCAGAGAATTGGAGGGAGAGGATGAGGAATCGGAGTTGCAGAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCCAGTGTTAG MKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKEIGGGVVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVACQC Homology
BLAST of HG10016969 vs. NCBI nr
Match: XP_038882971.1 (uncharacterized protein LOC120074056 [Benincasa hispida]) HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67 Identity = 133/147 (90.48%), Postives = 140/147 (95.24%), Query Frame = 0
BLAST of HG10016969 vs. NCBI nr
Match: KAA0025255.1 (uncharacterized protein E6C27_scaffold541G001040 [Cucumis melo var. makuwa] >TYK07412.1 uncharacterized protein E5676_scaffold202G001390 [Cucumis melo var. makuwa]) HSP 1 Score: 256.5 bits (654), Expect = 1.4e-64 Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of HG10016969 vs. NCBI nr
Match: XP_008462573.1 (PREDICTED: uncharacterized protein LOC103500900 [Cucumis melo]) HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64 Identity = 135/158 (85.44%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of HG10016969 vs. NCBI nr
Match: XP_004143322.2 (uncharacterized protein LOC101213283 [Cucumis sativus] >KGN48264.1 hypothetical protein Csa_003716 [Cucumis sativus]) HSP 1 Score: 254.2 bits (648), Expect = 6.9e-64 Identity = 135/156 (86.54%), Postives = 141/156 (90.38%), Query Frame = 0
BLAST of HG10016969 vs. NCBI nr
Match: XP_022972617.1 (uncharacterized protein LOC111471158 [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 8.7e-59 Identity = 125/154 (81.17%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of HG10016969 vs. ExPASy TrEMBL
Match: A0A5A7SLB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001390 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 6.7e-65 Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of HG10016969 vs. ExPASy TrEMBL
Match: A0A1S3CHA7 (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64 Identity = 135/158 (85.44%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of HG10016969 vs. ExPASy TrEMBL
Match: A0A0A0KHH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.3e-64 Identity = 135/156 (86.54%), Postives = 141/156 (90.38%), Query Frame = 0
BLAST of HG10016969 vs. ExPASy TrEMBL
Match: A0A6J1I5B2 (uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.2e-59 Identity = 125/154 (81.17%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of HG10016969 vs. ExPASy TrEMBL
Match: A0A6J1HG15 (uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC111463230 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.2e-59 Identity = 125/156 (80.13%), Postives = 136/156 (87.18%), Query Frame = 0
BLAST of HG10016969 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 2.2e-20 Identity = 59/167 (35.33%), Postives = 94/167 (56.29%), Query Frame = 0
BLAST of HG10016969 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 61/174 (35.06%), Postives = 86/174 (49.43%), Query Frame = 0
BLAST of HG10016969 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 5.3e-06 Identity = 32/94 (34.04%), Postives = 53/94 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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