HG10016967 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016967
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Signal recognition particle protein
Location	Chr03: 9741738 .. 9747928 (+)
RNA-Seq Expression	HG10016967
Synteny	HG10016967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCATTGCAAATTTCGACTGTTACTTCTCGTCATTTGGCTTCGAATTCTCAATCTCCTTGTGCGAGTAGAAGCTTGTGCCATGGTTCAAACTGCGGGAGAAAATCCTCGAGTATTTCATCTTCTTGGCTTGGTTCGAGTAATTTGAAGTCGCTCTCTTCGAGGAATTTGTTCGCTGTAAGACGATGATTGAGTTATTACTTGCGTATTTAAGTTATTTTCTGTTTGTTGCCTGGAATTTATGGCGATTTTGAGGAAGAATTTTGTGTAGTTTTACTAATTTCCATTTTTTGTTTTAAAAGGAGAGCTAAAATTTTGTTACTCCATCCGGTTAGAAATATTGTTCTGGATGTATGGTTACAGAGAAATGGTGAATATTTCCAGGTGTGGATTGCTTGTTGAGGGGAAATTTGAGAAAATAGTGTTTTTGTTTCTTCCACTGGTAGACGTTAGTCTTGCTACCATTTGTGTCAATTGGAGAGGATTCTTGAGTATTTTGCTGTTTACTATTAAATTTAAATAATACTTTCTTAGGTTCCTTAGGTTTAGTTTTGATTTTGTCCACAGACAGAGATTTGGGGTTGGCTTCATGCCAAGACTGCTAACACTAGGAGAGAGATGCGTGGGGTTGTACGAGCTGAAATGTTTGGCCAGTTGACAAGTGGCCTGGAGGCTGCTTGGAACAAACTCAAAGGAGAAGGTCTGTATATCTTTAATCCTTTTGATCGGTTGCCTTATTTTAAGTTTGTTTTATACAGGTGCACTATACATGAGTGATCCATGGAGTACTTTGATTATGGTTTGATGATAAAATGCAGTCAAGCAATAGATGTTCAAGATTTGCTAAATACATCAGATGGCCATTTAATTACCTGCATAGTGTTCTTGTACTGGAAGTACCTGAGCTGGTAAATGATATCTCACTTATGAGTAGATTGGATCGGGGTGGGGTGGTGGGCGGGTGCTGTGGAGTGGGGTGGGAGGGGGGGGGTGTTTCCCTTCTAATGTGGAATTACTACAAATCTTGTTAGTTTGTTTAACGAAGAAAAATGGACTTAATATAGGGATTCAGCCAAACTATATATACATGCACACAAACACACTTCCTTTTTTTAGGTTACATTAAACAAGATCTAATTCAGAGGAACTAATTTGTTCTGCCGGAGCATTTAATTATTTTCCTTTAAATGTGATCTGATAACAGCTGATTCTTAGAAAATTCATTTTGTTGATGGAACATTATCTTCCTTTAGAGGTTTTGTCAAAGGAAAATATTGTGGAGCCAATGCGAGATATTAGGAGAGCTCTTCTGGAGGCTGATGTAAGTAACTGCTACATTAGTTGTATATCAGTTCTTAGGTATAAAATAAGGTTTTTGGGTCCTGCTTGGTTAATATAGGTAAGCCTTCCTGTTGTACGAAGGTTTGTGCAAGCTGTCAGCGACCAAGCTGTTGGTGTTGGTGTGATTCGAGGAGTGAGACCTGATCAACAATTGGTTAAGGTATATAAGCTACCGTGAGTTTTACCTATATATTCTCGCATAATCCTTCAGCTACAAATGTACATGTGGACTTGGTTATTTTTCAGAAATTAGCAGTCCCTTCAAGTTGTACTACTGCTATTAGTAGGTCTCCTCTAGTGACTTGGTTATTTTTCAGAAATTAGCAGTCCCTTCAAGTTGTACTACTGCTATTAGTAGGTCTCCTCTAGTTTGCAAATGTTATCAAATGAACACCATGTTCTATTTTCTTTATACGTTGGTTTTGTCCTGGATATGAGGAAGTGTCCTTGGGTAAACGAGAGTAGACATGGAAAGTATTGTAGATTGAAACCGTTTTTGGCATTTGCATCCTACAAAATCTTGGGTCTATATTGGGTCAGGTCTGGGATCATCTTTTGTTGTTTACATTAGCATGGGTATTAAAAAAAATGTTTACAACATTAGCATTAATTTTCGACTGTTGGTGGTTGACTATAGCATAGAAGCTATCTTACTAGTGCGTATAACTTCATATTGGTCATGGTTTTATATAGTTTATGTAACATTTTTGTTGATTATAGGTGAATCCTGGGTTACATTTGAGATTGTAGTTTTTTCAGTTTATTAAGGTAATCTAGTAGCTTAATCAGAATTCGGCTGTTGTCTCTTATAGATTGTACACGATGAGCTTGTGAAATTGATGGGTGGAGAAGTCTCTGAACTTGTTTTTTCAAAGTCTGGCCCTACTGTCATACTGTTGGCTGGTCTACAAGGAGTTGGAAAGACAACCGTTTGTGCAAAATTGGCCAATTATCTTAAGAAACAAGTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTAAAAAAATTAATTTTATGTACAAGAAACAAGTGGTTTACATTTTCCATCTTCCTCTAATTAAGTGTGTGTATTGTGTTGGTTACTCTCTGCTTTACCTCCTGTCATCCCTTTTAATCAAATATGTTTTCTTAAAAAAAAAATGTTGAGTACAGGGGAAAAGTTGCATGCTGGTGGCAGGAGATGTGTATAGACCTGCTGCTATTGACCAATTAGTTATCTTGGGTGAACAGGTATGAAATTTCATTCTCATCGATGTCTTTTGCTTATTGACCACCGAGTAGTAAACCATAGTGTTATTTGCATATGATATGACTTATGAGGCTGAGCACAGGTGGGCGAGGAATGATATTTAGTTAATTAGTTTTAGACCTTATTTGGTGGACTCACTCAGCAGGAATATGAAGACATGACATGTCTGCATATAGAATAAAATGTAAAGGTTTCTAGTGAAGATAATGCGAACTTCTAATCCTTTTTTCTTTTTAGTAATGAAAACAAATTTTATGGAGAAAAAGAAATGAAAGAATACCAAGGGAATACAAAAAACCGAGCCCACAAAAGAAGGATATCTCACTAAAGAAAGGTGCTCCAACTATACAAAATTAGTTCCTATAGAATAGTTTTATAAAAAAGTTTTTGAAATCATAGCCTAGAGGGAAATATAGGATCTGACAAGGGACCAAACATCACTAGGATCCCTTTCCATCCCTCTAAACACTCTGTTATTCTGCTCCTTCCAAAGAACCTATAAAATAGCGCACACCCTTACAAACCACAAAATGCGACTCTTTCTCGTGAAAGGGTGGATGGAGAAGGAACTCCTCAATCATAACACTGGTGCCCCTGTGCTGCGCTAGCGAAAAGCCAAATATCTGAAAGAAGTAATTCCAGACAAAACTCACAGGGACTACTTAGCATAGGAAGAGGGACCACATGCTCCTTGATTGCTCTTGTTGGTAATTATCCTTTAAGATTTGGTGTTAAGGTGATAACTTATTTAGAAATTTTGTACAGGGTTGTAGTTTAAATTCAGGAGTTAAGAATTATTAGTTCGATGATTTTAATGGGTAACAATCTGCTTGTTCGTTTCCTAAGCAGCCGCTACTAATACTTTTGGGAAATATTCTGATATAGAATGTAGTGAAGAAGTTTGGCTCAAAAGGGAAATTGGAGATGAGTTTAATCGCCTCTGCTTTTAGATTGTGAGTGGTGCCTAGAATCGGAGCTTGTTCAATAAGTCTCATTGTGTTGTTTTCTATGTAGTGCGTGTAGCTGGGTGATCATAGTTGGTGTTATGCGGGATGAGAGTTCTTGTCATTCAAAATTAGTCAATAAATTATTCAAATGGAGCGTGATGTTTGCGTCTGATAAAGAGTTATGAACTTATCTACATATAATTCTTAGTAATTATTTTAACCTCACTTTTGGTCATAGTGAATTACAGGTGGGGGTGCCTGTTTATACAGCAGGTACTGAGGTTAAGCCTTCAGACATTGCAAAACAAGGTCTACAAGAGGCTCGAAAAAATAAATTAGATGTAGTAATCGTGGATACTGCTGGAAGGCTTCAGGTGCTCATTATTTTTGTTGCAAAAAATACTTGGATGGTCCATAACAATGTAGTACACATTGAAGACTGTCTGCCATTCATTTATTATACTTCTGAAAAATTCTACTCGTTTAAAAATTGAACAGATAGACAAGGCCATGATGGATGAATTAAAAGAAGTGAAACGAGTAATCAATCCAACCGAAGTGCTCCTTGTTGTGGATGCCATGACTGGTCAAGAAGCTGCAGGTACTTCATTCAGCAACCTTGGGAGACAAGTATTAAAATAACTTAGAGGACAATTAAGCCTATTGCCATCTTATGTGGTTTTGCAGCTTTGGTCACAACATTCAACATTGAGATAGGGATCACAGGTTCTATTCTGACAAAGCTAGACGGAGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGCATGTCCTTTCGCTAAACTAATGCACATAAGCTTGTTCAAGAATTAATTTACTGGGGCATGTTTTTTTAGCTCAGTTCTTTATGTTTATGCGCACGGTCAGTATCTTTAAATTGACAATAGCACTGGATAAATTTAGCAATCTATTCGATTTGTCTATTAATTTTTTTACAGGTATCAGGAAAGCCAATCAAGCTTGTAGGCCGTGGAGAACGTATGGAGGACCTTGAACCATTTTATCCAGACCGTATGGCAGGAAGAATCTTAGGAATGGGAGATGTCCTCTCTTTTGTGGAGAAGGCACAAGAAGTGGTAAGTTGGAATTATTTTTTCTCACTTTCAAACAAGTCTGTAGTTTTTAACTCAAATTGTGTATGTAGATGCGCCAAGAGGATGCAGAAGAACTGCAAAAGAAGATAATGAGTGCAAAATTTGACTTCAATGATTTCCTGAAGCAAACTCGTGCAGTTGCACGGATGGGATCTATGACTCGTGTCATTGGAATGATCCCTGGTATGGGAAAGGTGGGAATGCAAATCTTTTGAACTTCTACATCATAGTTTTCTTTGTGCCACTAAAAAGATACACAACTATGAGGTGCTAGTGTTTCAATTCACTAATAATTCAAATGGGTATCACGGGACTGTTTCCAGGTTTCAGTATTTGATGTTTAATGGGAATTACAATTTCTTACATTTGTCTTCTTAACTAATACTCCGGTTTTTTCACATAGGTCACTCCGGCCCAGGTTCGAGAAGCAGAAAAGAGTTTAAAAATAATGGAATCAATGATTGAAGCAATGACTCCCGGTATTTTCTTTTCTCCTGCTGCTTTCTTTCATGAGAGAGAATTTCATACTATATCGTGCTTAAGAGGCTATGATAAATCGTGGACCATATGCATGTTATGCATATGTTGCTTCTTTGTTATTAGAGGGCGTGCATTACATTTGCTTGATCGATTGGATTAGGTTTTTGCTAGATGAGAAGTTTTCTCAATTATTCTGATTGAATGGGCATTAAGCTTCTTGTTAACTTGGGTGGTCACATGTCAAGCTTAGAAAGTTGCCTAGTTATTATTAAAAGATAAAGATGAAGATGCCTTGTACATGTATGTATCATAGAGAAGTACCTAATAAAAATGAAATAGTGCAACAGTCATTTTCCACCGGTGTATATTTTTGCCTATTTAAGTACATCAAATATTGTTCCTTCTGCCTCTATTGATCTCTACTCACTGAACCTCTTCTACTGACAACTTTTCACTTGTTTAATCACAGAGGAAAGGGAGAAGCCAGAATTGTTGGCAGAATCACCTGCAAGGAGGAAAAGAATTGCTCAAGATTCAGGGAAAACAGAGCAGCAGGTATGCAAGTTCTTTCTTTCATGCAAAAATTGTTGATCATCCATCTTCATCTTAGAACTCCCCCTCCGCCACCACCTTAAATAATCTGGGAATCCACTGACGAAGACGATTTTATAAAACACTAGGTGAGCCAGCTCGTGGCTCAACTCTTCCAAATGCGTGTTCGTATGAAGAATTTGATGGGTGTGATGGAAGGTGGATCCATTCCTGCATTGAACAACCTTGAAGAAACTCTTAAAGCCGAACAAAAGGTTCCCCTTTTTTCTCCTCTTTCTCTATACTCGATCTATATTTTGGTTAGAACTTGAATAAATGAACTTCTATTAATAAATTATTCAATCCTTGTTCGGATATGTGAACGATATGGTTGTGACCTCATCAGGCCCCTCCTGGTACTGCACGAAGGAAGCGAAGATCCGAATCAAGGAAGCAATTTGTAAACTCAGGAACAAGGCCGAGTCCTCGTGGTTTTGGGAGTGGAAACTAA

mRNA sequence

ATGGAGGCATTGCAAATTTCGACTGTTACTTCTCGTCATTTGGCTTCGAATTCTCAATCTCCTTGTGCGAGTAGAAGCTTGTGCCATGGTTCAAACTGCGGGAGAAAATCCTCGAGTATTTCATCTTCTTGGCTTGGTTCGAGTAATTTGAAGTCGCTCTCTTCGAGGAATTTGTTCGCTACAGAGATTTGGGGTTGGCTTCATGCCAAGACTGCTAACACTAGGAGAGAGATGCGTGGGGTTGTACGAGCTGAAATGTTTGGCCAGTTGACAAGTGGCCTGGAGGCTGCTTGGAACAAACTCAAAGGAGAAGAGGTTTTGTCAAAGGAAAATATTGTGGAGCCAATGCGAGATATTAGGAGAGCTCTTCTGGAGGCTGATGTAAGCCTTCCTGTTGTACGAAGGTTTGTGCAAGCTGTCAGCGACCAAGCTGTTGGTGTTGGTGTGATTCGAGGAGTGAGACCTGATCAACAATTGGTTAAGATTGTACACGATGAGCTTGTGAAATTGATGGGTGGAGAAGTCTCTGAACTTGTTTTTTCAAAGTCTGGCCCTACTGTCATACTGTTGGCTGGTCTACAAGGAGTTGGAAAGACAACCGTTTGTGCAAAATTGGCCAATTATCTTAAGAAACAAGGGAAAAGTTGCATGCTGGTGGCAGGAGATGTGTATAGACCTGCTGCTATTGACCAATTAGTTATCTTGGGTGAACAGGTGGGGGTGCCTGTTTATACAGCAGGTACTGAGGTTAAGCCTTCAGACATTGCAAAACAAGGTCTACAAGAGGCTCGAAAAAATAAATTAGATGTAGTAATCGTGGATACTGCTGGAAGGCTTCAGATAGACAAGGCCATGATGGATGAATTAAAAGAAGTGAAACGAGTAATCAATCCAACCGAAGTGCTCCTTGTTGTGGATGCCATGACTGGTCAAGAAGCTGCAGCTTTGGTCACAACATTCAACATTGAGATAGGGATCACAGGTTCTATTCTGACAAAGCTAGACGGAGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGCATCTCAGTTCTTTATGTTTATGCGCACGGTATCAGGAAAGCCAATCAAGCTTGTAGGCCGTGGAGAACGTATGGAGGACCTTGAACCATTTTATCCAGACCGTATGGCAGGAAGAATCTTAGGAATGGGAGATGTCCTCTCTTTTGTGGAGAAGGCACAAGAAGTGATGCGCCAAGAGGATGCAGAAGAACTGCAAAAGAAGATAATGAGTGCAAAATTTGACTTCAATGATTTCCTGAAGCAAACTCGTGCAGTTGCACGGATGGGATCTATGACTCGTGTCATTGGAATGATCCCTGGTATGGGAAAGGTCACTCCGGCCCAGGTTCGAGAAGCAGAAAAGAGTTTAAAAATAATGGAATCAATGATTGAAGCAATGACTCCCGAGGAAAGGGAGAAGCCAGAATTGTTGGCAGAATCACCTGCAAGGAGGAAAAGAATTGCTCAAGATTCAGGGAAAACAGAGCAGCAGGTGAGCCAGCTCGTGGCTCAACTCTTCCAAATGCGTGTTCGTATGAAGAATTTGATGGGTGTGATGGAAGGTGGATCCATTCCTGCATTGAACAACCTTGAAGAAACTCTTAAAGCCGAACAAAAGGCCCCTCCTGGTACTGCACGAAGGAAGCGAAGATCCGAATCAAGGAAGCAATTTGTAAACTCAGGAACAAGGCCGAGTCCTCGTGGTTTTGGGAGTGGAAACTAA

Coding sequence (CDS)

ATGGAGGCATTGCAAATTTCGACTGTTACTTCTCGTCATTTGGCTTCGAATTCTCAATCTCCTTGTGCGAGTAGAAGCTTGTGCCATGGTTCAAACTGCGGGAGAAAATCCTCGAGTATTTCATCTTCTTGGCTTGGTTCGAGTAATTTGAAGTCGCTCTCTTCGAGGAATTTGTTCGCTACAGAGATTTGGGGTTGGCTTCATGCCAAGACTGCTAACACTAGGAGAGAGATGCGTGGGGTTGTACGAGCTGAAATGTTTGGCCAGTTGACAAGTGGCCTGGAGGCTGCTTGGAACAAACTCAAAGGAGAAGAGGTTTTGTCAAAGGAAAATATTGTGGAGCCAATGCGAGATATTAGGAGAGCTCTTCTGGAGGCTGATGTAAGCCTTCCTGTTGTACGAAGGTTTGTGCAAGCTGTCAGCGACCAAGCTGTTGGTGTTGGTGTGATTCGAGGAGTGAGACCTGATCAACAATTGGTTAAGATTGTACACGATGAGCTTGTGAAATTGATGGGTGGAGAAGTCTCTGAACTTGTTTTTTCAAAGTCTGGCCCTACTGTCATACTGTTGGCTGGTCTACAAGGAGTTGGAAAGACAACCGTTTGTGCAAAATTGGCCAATTATCTTAAGAAACAAGGGAAAAGTTGCATGCTGGTGGCAGGAGATGTGTATAGACCTGCTGCTATTGACCAATTAGTTATCTTGGGTGAACAGGTGGGGGTGCCTGTTTATACAGCAGGTACTGAGGTTAAGCCTTCAGACATTGCAAAACAAGGTCTACAAGAGGCTCGAAAAAATAAATTAGATGTAGTAATCGTGGATACTGCTGGAAGGCTTCAGATAGACAAGGCCATGATGGATGAATTAAAAGAAGTGAAACGAGTAATCAATCCAACCGAAGTGCTCCTTGTTGTGGATGCCATGACTGGTCAAGAAGCTGCAGCTTTGGTCACAACATTCAACATTGAGATAGGGATCACAGGTTCTATTCTGACAAAGCTAGACGGAGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGCATCTCAGTTCTTTATGTTTATGCGCACGGTATCAGGAAAGCCAATCAAGCTTGTAGGCCGTGGAGAACGTATGGAGGACCTTGAACCATTTTATCCAGACCGTATGGCAGGAAGAATCTTAGGAATGGGAGATGTCCTCTCTTTTGTGGAGAAGGCACAAGAAGTGATGCGCCAAGAGGATGCAGAAGAACTGCAAAAGAAGATAATGAGTGCAAAATTTGACTTCAATGATTTCCTGAAGCAAACTCGTGCAGTTGCACGGATGGGATCTATGACTCGTGTCATTGGAATGATCCCTGGTATGGGAAAGGTCACTCCGGCCCAGGTTCGAGAAGCAGAAAAGAGTTTAAAAATAATGGAATCAATGATTGAAGCAATGACTCCCGAGGAAAGGGAGAAGCCAGAATTGTTGGCAGAATCACCTGCAAGGAGGAAAAGAATTGCTCAAGATTCAGGGAAAACAGAGCAGCAGGTGAGCCAGCTCGTGGCTCAACTCTTCCAAATGCGTGTTCGTATGAAGAATTTGATGGGTGTGATGGAAGGTGGATCCATTCCTGCATTGAACAACCTTGAAGAAACTCTTAAAGCCGAACAAAAGGCCCCTCCTGGTACTGCACGAAGGAAGCGAAGATCCGAATCAAGGAAGCAATTTGTAAACTCAGGAACAAGGCCGAGTCCTCGTGGTTTTGGGAGTGGAAACTAA

Protein sequence

MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFATEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN

Homology

[Close]

BLAST of HG10016967 vs. NCBI nr
Match: XP_038882869.1 (signal recognition particle 54 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 1042.0 bits (2693), Expect = 2.0e-300
Identity = 559/582 (96.05%), Postives = 564/582 (96.91%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           MEALQISTV SRHLASNSQSPCASRSLCHGSNC RKSS+ISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEALQISTVASRHLASNSQSPCASRSLCHGSNCARKSSTISSSWLGSSNLKSLSSRNLFT 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRREMR VVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRREMRWVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFN+EIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNMEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA
Sbjct: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFG GN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGGGN 572

[Close]

BLAST of HG10016967 vs. NCBI nr
Match: XP_022925955.1 (signal recognition particle 54 kDa protein, chloroplastic [Cucurbita moschata] >XP_022977444.1 signal recognition particle 54 kDa protein, chloroplastic [Cucurbita maxima] >KAG7034496.1 Signal recognition particle 54 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1039.3 bits (2686), Expect = 1.3e-299
Identity = 556/582 (95.53%), Postives = 565/582 (97.08%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           MEALQIS V+SRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLT GLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKIMSA
Sbjct: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSES KQ +NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. NCBI nr
Match: KAG6604345.1 (Signal recognition particle 54 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1038.1 bits (2683), Expect = 2.9e-299
Identity = 555/582 (95.36%), Postives = 565/582 (97.08%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           MEALQIS V+SRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLT GLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKIMSA
Sbjct: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIME+MIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEAMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSES KQ +NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. NCBI nr
Match: XP_023544809.1 (signal recognition particle 54 kDa protein, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1037.3 bits (2681), Expect = 4.9e-299
Identity = 555/582 (95.36%), Postives = 564/582 (96.91%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           MEALQIS V+SRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTAN RR+MRGVVRAEMFGQLT GLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANNRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKIMSA
Sbjct: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSES KQ +NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. NCBI nr
Match: XP_008462577.1 (PREDICTED: signal recognition particle 54 kDa protein, chloroplastic isoform X1 [Cucumis melo] >XP_008462578.1 PREDICTED: signal recognition particle 54 kDa protein, chloroplastic isoform X1 [Cucumis melo] >KAA0025252.1 signal recognition particle 54 kDa protein [Cucumis melo var. makuwa] >TYK07415.1 signal recognition particle 54 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 1028.9 bits (2659), Expect = 1.7e-296
Identity = 552/582 (94.85%), Postives = 560/582 (96.22%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           ME LQISTV SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLTSGLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI+SA
Sbjct: 361 GKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTP+QVREAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSESRKQF NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESRKQFANSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. ExPASy Swiss-Prot
Match: P37107 (Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FFC PE=1 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 1.6e-244
Identity = 466/586 (79.52%), Postives = 516/586 (88.05%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSS-NLKSL-SSRNL 60
           MEALQ S+V        ++ PC     C G+   R  ++ SS++ G + N  SL SSRNL
Sbjct: 1   MEALQFSSV--------NRVPCTLS--CTGNR--RIKAAFSSAFTGGTINSASLSSSRNL 60

Query: 61  FATEIWGWLHAKT-ANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMR 120
              EIW W+ +KT     R  R  VRAEMFGQLT GLEAAW+KLKGEEVL+K+NI EPMR
Sbjct: 61  STREIWSWVKSKTVVGHGRYRRSQVRAEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMR 120

Query: 121 DIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSE 180
           DIRRALLEADVSLPVVRRFVQ+VSDQAVG+GVIRGV+PDQQLVKIVHDELVKLMGGEVSE
Sbjct: 121 DIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSE 180

Query: 181 LVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 240
           L F+KSGPTVILLAGLQGVGKTTVCAKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGE
Sbjct: 181 LQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGE 240

Query: 241 QVGVPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVIN 300
           QVGVPVYTAGT+VKP+DIAKQGL+EA+KN +DVVI+DTAGRLQIDK MMDELK+VK+ +N
Sbjct: 241 QVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLN 300

Query: 301 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMR 360
           PTEVLLVVDAMTGQEAAALVTTFN+EIGITG+ILTKLDGDSRGGAALSVKE         
Sbjct: 301 PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKE--------- 360

Query: 361 TVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI 420
            VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVMRQEDAE+LQKKI
Sbjct: 361 -VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKI 420

Query: 421 MSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTP 480
           MSAKFDFNDFLKQTRAVA+MGSMTRV+GMIPGMGKV+PAQ+REAEK+L +ME+MIE MTP
Sbjct: 421 MSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTP 480

Query: 481 EEREKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALN 540
           EERE+PELLAESP RRKRIA+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGSIPAL+
Sbjct: 481 EERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALS 540

Query: 541 NLEETLKAEQKAPPGTARRKRRSESRKQFVNS-GTRPSPRGFGSGN 583
            LE+ LKAEQKAPPGTARRKR+++SRK+FV S  ++P PRGFGSGN
Sbjct: 541 GLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564

[Close]

BLAST of HG10016967 vs. ExPASy Swiss-Prot
Match: Q55311 (Signal recognition particle protein OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=ffh PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.2e-130
Identity = 248/455 (54.51%), Postives = 334/455 (73.41%), Query Frame = 0


Query: 86  MFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAV 145
           MF  L   LE AW KL+G++ +S+ N+ E ++++RRALLEADV+L VV+ F+  V ++AV
Sbjct: 1   MFDALAERLEQAWTKLRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAV 60

Query: 146 GVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKL 205
           G  VI G+RPDQQ +K+V+DELV++MG     L  +   PTVIL+AGLQG GKTT  AKL
Sbjct: 61  GTQVISGIRPDQQFIKVVYDELVQVMGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKL 120

Query: 206 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARK 265
           A +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+ VPV+  G++  P +IA+QG+++AR+
Sbjct: 121 ALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQ 180

Query: 266 NKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 325
             +D VIVDTAGRLQID  MM+EL +VK  I P EVLLVVD+M GQEAA+L  +F+  IG
Sbjct: 181 EGIDTVIVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG 240

Query: 326 ITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFYPDRMA 385
           ITG+ILTKLDGDSRGGAALS+          R VSG+PIK VG GE++E L+PF+P+RMA
Sbjct: 241 ITGAILTKLDGDSRGGAALSI----------RRVSGQPIKFVGLGEKVEALQPFHPERMA 300

Query: 386 GRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIG 445
            RILGMGDVL+ VEKAQE +   D E++Q+KI++AKFDF DFLKQ R +  MGS+   I 
Sbjct: 301 SRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQMRLLKNMGSLAGFIK 360

Query: 446 MIPGM-GKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRIAQDSGKTE 505
           +IPG+ GK+   Q+R+ E+ LK +E+MI +MTP+ER  P+LL+ SP+RR RIA+  G+TE
Sbjct: 361 LIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTE 420

Query: 506 QQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNL 540
            ++ Q++ Q  QMR  M+     M  G  P +  +
Sbjct: 421 AEIRQIIQQFQQMRTMMQQ----MSQGGFPGMGGM 441

[Close]

BLAST of HG10016967 vs. ExPASy Swiss-Prot
Match: P74214 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ffh PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 4.2e-128
Identity = 247/447 (55.26%), Postives = 327/447 (73.15%), Query Frame = 0


Query: 86  MFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAV 145
           MF  L   LE AW KL+G++ +S+ NI E ++++RRALL ADV+L VV+ F++ V  +A+
Sbjct: 1   MFDALADRLEDAWKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKAL 60

Query: 146 GVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKL 205
           G  VI GV P QQ +KIV+DELV LMG     L  ++  PTVIL+AGLQG GKTT  AKL
Sbjct: 61  GADVISGVNPGQQFIKIVYDELVNLMGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKL 120

Query: 206 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARK 265
           A YL+KQ +S ++VA DVYRPAAIDQL  LG+Q+ VPV+  G++  P +IA+QG+++A++
Sbjct: 121 ALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKE 180

Query: 266 NKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 325
             +D V++DTAGRLQID  MM EL E+K+V+ P + LLVVDAMTGQEAA L  TF+ +IG
Sbjct: 181 LGVDTVLIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG 240

Query: 326 ITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFYPDRMA 385
           ITG+ILTKLDGD+RGGAALSV          R +SG+PIK VG GE++E L+PFYPDR+A
Sbjct: 241 ITGAILTKLDGDTRGGAALSV----------RQISGQPIKFVGVGEKVEALQPFYPDRLA 300

Query: 386 GRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIG 445
            RIL MGDVL+ VEKAQE +   D E+LQ KI+ A FDF+DF+KQ R +  MGS+  ++ 
Sbjct: 301 SRILNMGDVLTLVEKAQEAIDVGDVEKLQNKILEATFDFDDFIKQMRFMKNMGSLGGLLK 360

Query: 446 MIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRIAQDSGKTEQ 505
           MIPGM K++   + + EK LK  E+MI +MT EER+ P+LLA+SP+RR+RIAQ SG +E 
Sbjct: 361 MIPGMNKLSSGDIEKGEKELKRTEAMISSMTTEERKNPDLLAKSPSRRRRIAQGSGHSET 420

Query: 506 QVSQLVAQLFQMRVRMKNL-MGVMEGG 532
            VS+L+    +MR  M+ + MG M GG
Sbjct: 421 DVSKLITNFTKMRTMMQQMGMGGMPGG 437

[Close]

BLAST of HG10016967 vs. ExPASy Swiss-Prot
Match: P37105 (Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 GN=ffh PE=1 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 5.0e-105
Identity = 206/446 (46.19%), Postives = 313/446 (70.18%), Query Frame = 0


Query: 87  FGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVG 146
           F  L   L+   +K++G+  +S++++ E MR++R ALLEADV+  VV+ FV+ VS++AVG
Sbjct: 3   FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62

Query: 147 VGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLA 206
             V++ + P QQ++K+V +EL +LMGGE S++  +K  PTVI++ GLQG GKTT   KLA
Sbjct: 63  QDVMKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122

Query: 207 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARK 266
           N L KK  +  MLVA D+YRPAAI QL  LG+Q+ +PV++ G +V P +IAKQ +++A++
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182

Query: 267 NKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 326
              D VI+DTAGRL ID  +MDEL  VK + NP E+ LVVD+MTGQ+A  +  +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242

Query: 327 ITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFYPDRMA 386
           +TG +LTKLDGD+RGGAALS+          R V+  PIK  G GE+++ LEPF+P+RMA
Sbjct: 243 LTGVVLTKLDGDTRGGAALSI----------RAVTNTPIKFAGLGEKLDALEPFHPERMA 302

Query: 387 GRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIG 446
            RILGMGDVL+ +EKAQ  + ++ A+EL++K+ +  F  +DFL+Q   V  MG +  ++ 
Sbjct: 303 SRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQ 362

Query: 447 MIPGMGKVTPAQ-VREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRIAQDSGKTE 506
           M+PG GK+   + ++  EK L  +E++I++MT  E+E+P+++  + +RRKRIA+ SG + 
Sbjct: 363 MMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQPDII--NASRRKRIAKGSGTSV 422

Query: 507 QQVSQLVAQLFQMRVRMKNLMGVMEG 531
           Q+V++L+ Q  +M+  MK +  + +G
Sbjct: 423 QEVNRLLKQFDEMKKMMKQMTNMSKG 436

[Close]

BLAST of HG10016967 vs. ExPASy Swiss-Prot
Match: Q54431 (Signal recognition particle protein OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) OX=210007 GN=ffh PE=3 SV=3)

HSP 1 Score: 378.3 bits (970), Expect = 1.6e-103
Identity = 208/446 (46.64%), Postives = 300/446 (67.26%), Query Frame = 0


Query: 87  FGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVG 146
           F  LT  L+  +  L+G+  LS++++ E  ++IR ALLEADV+LPVV+ F++ V  +AVG
Sbjct: 3   FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62

Query: 147 VGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLA 206
             VI  + P QQ++KIV++EL  ++G E +E+  S   PT+I++ GLQG GKTT   KLA
Sbjct: 63  HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122

Query: 207 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARK 266
           N L K++    +++A D+YRPAAIDQL  LG+Q+ VPV+  GTE    +I  QGL +A++
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182

Query: 267 NKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 326
           N+ D V++DTAGRLQID+ +M EL+++K + NP E+LLVVD+M GQEAA +   FN ++ 
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242

Query: 327 ITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFYPDRMA 386
           +TG ILTK+DGD+RGGAALSV          R ++GKPIK  G GE++ D+E F+PDRM+
Sbjct: 243 VTGVILTKIDGDTRGGAALSV----------RQITGKPIKFTGTGEKITDIETFHPDRMS 302

Query: 387 GRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIG 446
            RILGMGD+L+ +EKA +   ++ + EL +K+    FDFNDF++Q   V  MGSM  ++ 
Sbjct: 303 SRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGSMEDILK 362

Query: 447 MIPGM-GKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRIAQDSGKTE 506
           MIPGM      A V+  E  +    +++ +MTPEERE P+LL  +P+RR+RIA  SG T 
Sbjct: 363 MIPGMANNPALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTF 422

Query: 507 QQVSQLVAQLFQMRVRMKNLMGVMEG 531
             V++ +    Q +   K + GVM G
Sbjct: 423 VNVNKFIKDFNQAK---KMMQGVMSG 433

[Close]

BLAST of HG10016967 vs. ExPASy TrEMBL
Match: A0A6J1IRE1 (signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477788 PE=3 SV=1)

HSP 1 Score: 1039.3 bits (2686), Expect = 6.2e-300
Identity = 556/582 (95.53%), Postives = 565/582 (97.08%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           MEALQIS V+SRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLT GLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKIMSA
Sbjct: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSES KQ +NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. ExPASy TrEMBL
Match: A0A6J1EJP1 (signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433217 PE=3 SV=1)

HSP 1 Score: 1039.3 bits (2686), Expect = 6.2e-300
Identity = 556/582 (95.53%), Postives = 565/582 (97.08%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           MEALQIS V+SRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLT GLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKIMSA
Sbjct: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSES KQ +NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. ExPASy TrEMBL
Match: A0A1S3CHA2 (signal recognition particle 54 kDa protein, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500903 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 8.4e-297
Identity = 552/582 (94.85%), Postives = 560/582 (96.22%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           ME LQISTV SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLTSGLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI+SA
Sbjct: 361 GKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTP+QVREAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSESRKQF NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESRKQFANSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. ExPASy TrEMBL
Match: A0A5D3C7H8 (Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001420 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 8.4e-297
Identity = 552/582 (94.85%), Postives = 560/582 (96.22%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           ME LQISTV SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKTANTRR+MRGVVRAEMFGQLTSGLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQIDKAMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI+SA
Sbjct: 361 GKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTP+QVREAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSESRKQF NSGTRPSPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESRKQFANSGTRPSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. ExPASy TrEMBL
Match: A0A0A0KIP4 (Signal recognition particle protein OS=Cucumis sativus OX=3659 GN=Csa_6G452680 PE=3 SV=1)

HSP 1 Score: 1027.3 bits (2655), Expect = 2.5e-296
Identity = 551/582 (94.67%), Postives = 559/582 (96.05%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60
           ME LQISTV SRHL SNSQS CASR LCHGSNC RK+SSISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEGLQISTVASRHLTSNSQSHCASRGLCHGSNCARKTSSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  TEIWGWLHAKTANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120
            EIWGWLHAKT NTRR+MRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNK+DVVIVDTAGRLQID+AMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVS 360
           VLLVVDAMTGQEAAALVTTFNIEIGITG+ILTKLDGDSRGGAALSVKE          VS
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKE----------VS 360

Query: 361 GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSA 420
           GKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI+SA
Sbjct: 361 GKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSA 420

Query: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480
           KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER
Sbjct: 421 KFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEER 480

Query: 481 EKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540
           EKPELLAESPARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE
Sbjct: 481 EKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLE 540

Query: 541 ETLKAEQKAPPGTARRKRRSESRKQFVNSGTRPSPRGFGSGN 583
           E LKAEQKAPPGTARRKRRSESRKQF NS TR SPRGFGSGN
Sbjct: 541 EALKAEQKAPPGTARRKRRSESRKQFANSETRSSPRGFGSGN 572

[Close]

BLAST of HG10016967 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 846.7 bits (2186), Expect = 1.1e-245
Identity = 466/586 (79.52%), Postives = 516/586 (88.05%), Query Frame = 0


Query: 1   MEALQISTVTSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSS-NLKSL-SSRNL 60
           MEALQ S+V        ++ PC     C G+   R  ++ SS++ G + N  SL SSRNL
Sbjct: 1   MEALQFSSV--------NRVPCTLS--CTGNR--RIKAAFSSAFTGGTINSASLSSSRNL 60

Query: 61  FATEIWGWLHAKT-ANTRREMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMR 120
              EIW W+ +KT     R  R  VRAEMFGQLT GLEAAW+KLKGEEVL+K+NI EPMR
Sbjct: 61  STREIWSWVKSKTVVGHGRYRRSQVRAEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMR 120

Query: 121 DIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSE 180
           DIRRALLEADVSLPVVRRFVQ+VSDQAVG+GVIRGV+PDQQLVKIVHDELVKLMGGEVSE
Sbjct: 121 DIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSE 180

Query: 181 LVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGE 240
           L F+KSGPTVILLAGLQGVGKTTVCAKLA YLKKQGKSCML+AGDVYRPAAIDQLVILGE
Sbjct: 181 LQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGE 240

Query: 241 QVGVPVYTAGTEVKPSDIAKQGLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVIN 300
           QVGVPVYTAGT+VKP+DIAKQGL+EA+KN +DVVI+DTAGRLQIDK MMDELK+VK+ +N
Sbjct: 241 QVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLN 300

Query: 301 PTEVLLVVDAMTGQEAAALVTTFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMR 360
           PTEVLLVVDAMTGQEAAALVTTFN+EIGITG+ILTKLDGDSRGGAALSVKE         
Sbjct: 301 PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKE--------- 360

Query: 361 TVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI 420
            VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVMRQEDAE+LQKKI
Sbjct: 361 -VSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKI 420

Query: 421 MSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTP 480
           MSAKFDFNDFLKQTRAVA+MGSMTRV+GMIPGMGKV+PAQ+REAEK+L +ME+MIE MTP
Sbjct: 421 MSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTP 480

Query: 481 EEREKPELLAESPARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALN 540
           EERE+PELLAESP RRKRIA+DSGKTEQQVS LVAQ+FQMRV+MKNLMGVMEGGSIPAL+
Sbjct: 481 EERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALS 540

Query: 541 NLEETLKAEQKAPPGTARRKRRSESRKQFVNS-GTRPSPRGFGSGN 583
            LE+ LKAEQKAPPGTARRKR+++SRK+FV S  ++P PRGFGSGN
Sbjct: 541 GLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGSGN 564

[Close]

BLAST of HG10016967 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-50
Identity = 135/476 (28.36%), Postives = 238/476 (50.00%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++T  ++    ++    ++ ++ + E + +I RALL++DVS P+V+     +
Sbjct: 1   MVLAELGGRITRAIQ----QMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTT 200
                   +  G    + + + +  EL K++          K+  +V++  GLQG GKTT
Sbjct: 61  KKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTT 120

Query: 201 VCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGL 260
            C K A Y +K+G    LV  D +R  A DQL     +  +P Y + TE  P  IA +G+
Sbjct: 121 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 180

Query: 261 QEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTF 320
              +K   D++IVDT+GR + + ++ +E+++V     P  V+ V+D+  GQ A      F
Sbjct: 181 DTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAF 240

Query: 321 NIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFY 380
              + +   I+TK+DG ++GG ALS   A++           P+  +G GE M++ E F 
Sbjct: 241 KQSVAVGAVIITKMDGHAKGGGALSAVAATK----------SPVIFIGTGEHMDEFEVFD 300

Query: 381 PDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSM 440
                 R+LGMGD   FV+K QEV+ ++   EL +K+    F       Q + +  MG +
Sbjct: 301 VKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPL 360

Query: 441 TRVIGMIPGMGKVTPAQVREAEKSLKIME--SMIEAMTPEEREKPELLAESPARRKRIAQ 500
             V  M+PG+      +  E E   KI    +M+++MT +E +       + +R  RIA+
Sbjct: 361 KEVFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIAR 420

Query: 501 DSGKTEQQVSQLVAQ---LFQMRVRMKNLMGVMEGGSIPALNNLEETLKAEQKAPP 552
            SG+  ++V +++ +   L ++  +MK L  + + G + AL+         +  PP
Sbjct: 421 GSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNAQHMSKVLPP 461

[Close]

BLAST of HG10016967 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-50
Identity = 126/432 (29.17%), Postives = 219/432 (50.69%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++T  ++    ++    ++ ++ + E + +I RALL++DVS P+V+     +
Sbjct: 1   MVLAELGGRITRAIQ----QMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTT 200
                   +  G    + + + +  EL K++          K+  +V++  GLQG GKTT
Sbjct: 61  KKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTT 120

Query: 201 VCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGL 260
            C K A Y +K+G    LV  D +R  A DQL     +  +P Y + TE  P  IA +G+
Sbjct: 121 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 180

Query: 261 QEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTF 320
              +K   D++IVDT+GR + + ++ +E+++V     P  V+ V+D+  GQ A      F
Sbjct: 181 DTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAF 240

Query: 321 NIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFY 380
              + +   I+TK+DG ++GG ALS   A++           P+  +G GE M++ E F 
Sbjct: 241 KQSVAVGAVIITKMDGHAKGGGALSAVAATK----------SPVIFIGTGEHMDEFEVFD 300

Query: 381 PDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSM 440
                 R+LGMGD   FV+K QEV+ ++   EL +K+    F       Q + +  MG +
Sbjct: 301 VKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPL 360

Query: 441 TRVIGMIPGMGKVTPAQVREAEKSLKIME--SMIEAMTPEEREKPELLAESPARRKRIAQ 500
             V  M+PG+      +  E E   KI    +M+++MT +E +       + +R  RIA+
Sbjct: 361 KEVFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIAR 418

Query: 501 DSGKTEQQVSQL 511
            SG+  ++V ++
Sbjct: 421 GSGRQVREVMEI 418

[Close]

BLAST of HG10016967 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-45
Identity = 126/465 (27.10%), Postives = 228/465 (49.03%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++T  ++    ++    ++ ++ + + + +I RALL++DVS  +V +    +
Sbjct: 1   MVLAELGGRITRAIQ----QMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTT 200
                   +  G      + + +  EL +++          K+ P+V++  GLQG GKTT
Sbjct: 61  KKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTT 120

Query: 201 VCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGL 260
            C K A Y +K+G    LV  D +R  A DQL     +  +P Y + TE  P  IA +G+
Sbjct: 121 TCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 180

Query: 261 QEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTF 320
              +K K D++IVDT+GR +   ++ +E+++V     P  V+ V+D+  GQ A      F
Sbjct: 181 DRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAF 240

Query: 321 NIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEPFY 380
              + +   I+TK+DG ++GG ALS   A++           P+  +G GE M++ E F 
Sbjct: 241 KETVSVGAVIITKMDGHAKGGGALSAVAATK----------SPVIFIGTGEHMDEFEVFD 300

Query: 381 PDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSM 440
                 R+LG GD    V+K QEV+ ++   EL + +    F       Q +   R+  +
Sbjct: 301 VKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PL 360

Query: 441 TRVIGMIPGMG--KVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRIAQ 500
            ++  M+PG+    +      E+   +K   +M+++MT +E + P     + +R  RIA+
Sbjct: 361 NQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIAR 420

Query: 501 DSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEETL 544
            SG+       LV ++ +M    K +   M+G  IP   ++ + +
Sbjct: 421 GSGR-------LVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVI 443

[Close]

BLAST of HG10016967 vs. TAIR 10
Match: AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 176.8 bits (447), Expect = 5.1e-44
Identity = 124/476 (26.05%), Postives = 234/476 (49.16%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++ S ++    K+    ++ ++ + + + +I RALL++DVS P+V+     +
Sbjct: 1   MVLAELGGRIMSAIQ----KMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQG--VGK 200
                   +  G    + + + +  EL K++    S     K+ P+V++  GLQG  + K
Sbjct: 61  KKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEK 120

Query: 201 TTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQ 260
             +   +   ++++G    LV  D +R  A DQL     +  +P Y + T   P  IA +
Sbjct: 121 PQLVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVE 180

Query: 261 GLQEARKNKLDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVT 320
           G+   +K   D++IVDT+GR +   ++ +E++++     P  V+ V+D+  GQ A     
Sbjct: 181 GVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQAR 240

Query: 321 TFNIEIGITGSILTKLDGDSRGGAALSVKEASQFFMFMRTVSGKPIKLVGRGERMEDLEP 380
            F   + +   I+TK+DG ++GG  LS   A++           P+  +G GE M++ E 
Sbjct: 241 AFKQTVAVGAVIITKMDGHAKGGGTLSAVAATK----------SPVIFIGTGEHMDEFEV 300

Query: 381 FYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMG 440
           F       R+LG GD+  FV K QEV+ ++   EL + +   KF       Q + +  MG
Sbjct: 301 FDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMG 360

Query: 441 SMTRVIGMIPGMGKVTPAQVREAEKSLKIME--SMIEAMTPEEREKPELLAESPARRKRI 500
            +  V  M+PGM      +  E E   KI    +M+++MT EE +       + +R  RI
Sbjct: 361 PLKEVFSMLPGMRAEMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRI 420

Query: 501 AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGV--MEGGSIPALNNLEETLKAEQKAP 551
           A+ SG+  ++V +++ +  ++      + G+  +E G++ AL+  + + +  +  P
Sbjct: 421 ARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLP 462

The following BLAST results are available for this feature:

BLAST of HG10016967 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882869.1	2.0e-300	96.05	signal recognition particle 54 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022925955.1	1.3e-299	95.53	signal recognition particle 54 kDa protein, chloroplastic [Cucurbita moschata] >...	[more]
KAG6604345.1	2.9e-299	95.36	Signal recognition particle 54 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]
XP_023544809.1	4.9e-299	95.36	signal recognition particle 54 kDa protein, chloroplastic [Cucurbita pepo subsp....	[more]
XP_008462577.1	1.7e-296	94.85	PREDICTED: signal recognition particle 54 kDa protein, chloroplastic isoform X1 ...	[more]

BLAST of HG10016967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37107	1.6e-244	79.52	Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q55311	1.2e-130	54.51	Signal recognition particle protein OS=Synechococcus elongatus (strain PCC 7942 ...	[more]
P74214	4.2e-128	55.26	Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803 / Kazu...	[more]
P37105	5.0e-105	46.19	Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 ...	[more]
Q54431	1.6e-103	46.64	Signal recognition particle protein OS=Streptococcus mutans serotype c (strain A...	[more]

BLAST of HG10016967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRE1	6.2e-300	95.53	signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1EJP1	6.2e-300	95.53	signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita moschata ...	[more]
A0A1S3CHA2	8.4e-297	94.85	signal recognition particle 54 kDa protein, chloroplastic isoform X1 OS=Cucumis ...	[more]
A0A5D3C7H8	8.4e-297	94.85	Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KIP4	2.5e-296	94.67	Signal recognition particle protein OS=Cucumis sativus OX=3659 GN=Csa_6G452680 P...	[more]

BLAST of HG10016967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03940.1	1.1e-245	79.52	chloroplast signal recognition particle 54 kDa subunit	[more]
AT1G48900.1	1.2e-50	28.36	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	3.6e-50	29.17	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	1.2e-45	27.10	signal recognition particle 54 kDa subunit	[more]
AT5G49500.1	5.1e-44	26.05	Signal recognition particle, SRP54 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 184..328 e-value: 1.1E-11 score: 54.8
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 86..171 e-value: 9.6E-29 score: 111.5
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 90..167 e-value: 1.6E-17 score: 63.4
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 185..390 e-value: 2.0E-106 score: 369.5
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 185..390 e-value: 3.0E-73 score: 245.6
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 363..376
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	GENE3D	1.10.260.30		coord: 401..525 e-value: 1.6E-36 score: 127.3
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 421..522
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	PFAM	PF02978	SRP_SPB	coord: 421..519 e-value: 1.3E-24 score: 86.8
IPR004780	Signal recognition particle protein	TIGRFAM	TIGR00959	TIGR00959	coord: 88..522 e-value: 6.1E-164 score: 543.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 175..379 e-value: 1.8E-115 score: 387.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 127..448
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 89..400 e-value: 1.8E-115 score: 387.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 544..582
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 476..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 476..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 566..582
None	No IPR available	PANTHER	PTHR11564:SF35	BNAC02G02820D PROTEIN	coord: 60..582
None	No IPR available	CDD	cd18539	SRP_G	coord: 186..388 e-value: 4.78356E-117 score: 343.427
IPR022941	Signal recognition particle, SRP54 subunit	PANTHER	PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	coord: 60..582
IPR022941	Signal recognition particle, SRP54 subunit	HAMAP	MF_00306	SRP54	coord: 90..537 score: 31.394712

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016967.1	HG10016967.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019904	protein domain specific binding