
HG10016787 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACACCCTCCAAATTATACAGCACCTGCTCTCTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGGTATTTCAAACCCTTCTCTTCTTTTCCTTTAATTAACAAACTTGGGAATCAAAGATCCAAACTTTTCAAAATCTTAGGCTGCTTTCTGTTGATCATGATCTGAGAAAAAAAAAAAAATTGATGAAAAACTAGACTAGAACTGGATCTCGATTTGAGAAACTAGTTGAAATTGTGTTTGAGTAATGTAAATTTGAAAACAAACACTTATTGGATGGTTAAAACAATTATACCATTTAATAAAATAAGTTATGAAATGTATTTCGGAACATCACATGTGGATAGGTGGATTTCTCCTGTTGCACGTGCAACCATTTTTACGATAAGAGACTATGATCCAACTACTCACTACAACGATCTATTAGAATATGTATTTGGGCGTTCGTGATGCAATCATATCACATTTCAAGAGGGTGTGTATAGTTTTAGACTTTTACCGTTTTTGTTTGTATATTTATGATAATACTATGAATGTTAGGACGCTTTCAAGACATATTTTTGGATATCGCTATACAATAACAAGTACAACTTATTTTAAACTTAATGGATACGAAATACTCATATGCTTTAGCATCTAGTATAACCGTCCTGGTGCAACACAGGACACTGATTTGACTTGGGAGGTGGTGATTTAGTTTGACGAGTTATTAACAATACGTACATTTCAAACGTGCATCTACACAGTTATTCAGGATTACTAATCATCTTGTGACAATCATTCAATAATTTTTTCCAAATTCTGATATTGACTTGAGCAGATTGGTATTTATGGGTTCCACTTTATGGGTGTGCTTGTGCTGTGAATTTTCTCAACTGGAATGTCTCCTTAGAAGCCATAAATCAAGTTGCTAAGGCAACAATGGGACTTGGAATATGTTTGTGGGTGAAGGTGGTAGCAGAGGACTATATGAATGGTATTGCTGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTTTGTGTTCCGTGATATTACATCTGAGAGCTGCATCATCATCATCCCCAAATATTCACAGAACAACTAAAAGTAAAAGGGAATTTCCAAGATATCTCACATATGGCAAGGCTTCTATAAGCTAA ATGGCAACACCCTCCAAATTATACAGCACCTGCTCTCTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGGTGTGCTTGTGCTGTGAATTTTCTCAACTGGAATGTCTCCTTAGAAGCCATAAATCAAGTTGCTAAGGCAACAATGGGACTTGGAATATGTTTGTGGGTGAAGGTGGTAGCAGAGGACTATATGAATGGTATTGCTGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTTTGTGTTCCGTGATATTACATCTGAGAGCTGCATCATCATCATCCCCAAATATTCACAGAACAACTAAAAGTAAAAGGGAATTTCCAAGATATCTCACATATGGCAAGGCTTCTATAAGCTAA ATGGCAACACCCTCCAAATTATACAGCACCTGCTCTCTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGGTGTGCTTGTGCTGTGAATTTTCTCAACTGGAATGTCTCCTTAGAAGCCATAAATCAAGTTGCTAAGGCAACAATGGGACTTGGAATATGTTTGTGGGTGAAGGTGGTAGCAGAGGACTATATGAATGGTATTGCTGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTTTGTGTTCCGTGATATTACATCTGAGAGCTGCATCATCATCATCCCCAAATATTCACAGAACAACTAAAAGTAAAAGGGAATTTCCAAGATATCTCACATATGGCAAGGCTTCTATAAGCTAA MATPSKLYSTCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNFLNWNVSLEAINQVAKATMGLGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVLCSVILHLRAASSSSPNIHRTTKSKREFPRYLTYGKASIS Homology
BLAST of HG10016787 vs. NCBI nr
Match: XP_031742851.1 (transmembrane protein 220 isoform X1 [Cucumis sativus]) HSP 1 Score: 257.3 bits (656), Expect = 8.0e-65 Identity = 126/145 (86.90%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of HG10016787 vs. NCBI nr
Match: XP_038881309.1 (transmembrane protein 220 isoform X1 [Benincasa hispida]) HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64 Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0
BLAST of HG10016787 vs. NCBI nr
Match: XP_038881310.1 (transmembrane protein 220 isoform X2 [Benincasa hispida]) HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64 Identity = 127/146 (86.99%), Postives = 133/146 (91.10%), Query Frame = 0
BLAST of HG10016787 vs. NCBI nr
Match: XP_004141949.1 (transmembrane protein 220 isoform X2 [Cucumis sativus] >KGN48459.1 hypothetical protein Csa_003964 [Cucumis sativus]) HSP 1 Score: 255.0 bits (650), Expect = 4.0e-64 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of HG10016787 vs. NCBI nr
Match: XP_008440175.1 (PREDICTED: transmembrane protein 220 [Cucumis melo] >TYK12942.1 transmembrane protein 220 [Cucumis melo var. makuwa]) HSP 1 Score: 254.6 bits (649), Expect = 5.2e-64 Identity = 123/145 (84.83%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of HG10016787 vs. ExPASy TrEMBL
Match: A0A0A0KI28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487800 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of HG10016787 vs. ExPASy TrEMBL
Match: A0A5D3CNK6 (Transmembrane protein 220 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005370 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64 Identity = 123/145 (84.83%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of HG10016787 vs. ExPASy TrEMBL
Match: A0A1S3B186 (transmembrane protein 220 OS=Cucumis melo OX=3656 GN=LOC103484718 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64 Identity = 123/145 (84.83%), Postives = 133/145 (91.72%), Query Frame = 0
BLAST of HG10016787 vs. ExPASy TrEMBL
Match: A0A6J1HG20 (uncharacterized protein LOC111463236 OS=Cucurbita moschata OX=3662 GN=LOC111463236 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 8.6e-57 Identity = 112/145 (77.24%), Postives = 127/145 (87.59%), Query Frame = 0
BLAST of HG10016787 vs. ExPASy TrEMBL
Match: A0A6J1BUR8 (transmembrane protein 220 OS=Momordica charantia OX=3673 GN=LOC111005894 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56 Identity = 114/145 (78.62%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of HG10016787 vs. TAIR 10
Match: AT2G23755.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 134.0 bits (336), Expect = 9.5e-32 Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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