
HG10016742 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTGCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCCTTGAGCAGGCCATTGAATTCCCACACAAATCACCAACTATCTGAGACCCCTCCAAAACACCCTCATTTCCAATTCCATGCTGAAAGTGTGGATGAAGGAAAAGGGTCAAACGGCGCCGTTTCTACTCCGAACCCGAACACACCAGCTGCAGGTTCGTCTCCCGGGAGGCAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTCAGAACTAA ATGGCGCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTGCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCCTTGAGCAGGCCATTGAATTCCCACACAAATCACCAACTATCTGAGACCCCTCCAAAACACCCTCATTTCCAATTCCATGCTGAAAGTGTGGATGAAGGAAAAGGGTCAAACGGCGCCGTTTCTACTCCGAACCCGAACACACCAGCTGCAGGTTCGTCTCCCGGGAGGCAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTCAGAACTAA ATGGCGCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTGCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCCTTGAGCAGGCCATTGAATTCCCACACAAATCACCAACTATCTGAGACCCCTCCAAAACACCCTCATTTCCAATTCCATGCTGAAAGTGTGGATGAAGGAAAAGGGTCAAACGGCGCCGTTTCTACTCCGAACCCGAACACACCAGCTGCAGGTTCGTCTCCCGGGAGGCAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTCAGAACTAA MAPTKLSFAFLFIALLILCHLIDSALSRPLNSHTNHQLSETPPKHPHFQFHAESVDEGKGSNGAVSTPNPNTPAAGSSPGRQMDDFRPTTPGHSPGVGHSIQN Homology
BLAST of HG10016742 vs. NCBI nr
Match: KAG7027066.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.8 bits (390), Expect = 3.9e-34 Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 0
BLAST of HG10016742 vs. NCBI nr
Match: KAG6595043.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.8 bits (390), Expect = 3.9e-34 Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 0
BLAST of HG10016742 vs. NCBI nr
Match: TYK12897.1 (hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa]) HSP 1 Score: 152.5 bits (384), Expect = 1.9e-33 Identity = 82/107 (76.64%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of HG10016742 vs. NCBI nr
Match: KGN48516.1 (hypothetical protein Csa_002724 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 3.3e-33 Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of HG10016742 vs. NCBI nr
Match: KAG6604187.1 (hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 3.8e-29 Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy Swiss-Prot
Match: Q058G9 (Precursor of CEP5 OS=Arabidopsis thaliana OX=3702 GN=CEP5 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 8.9e-05 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy Swiss-Prot
Match: O80460 (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 2.0e-04 Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy TrEMBL
Match: A0A5D3CLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004910 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 9.4e-34 Identity = 82/107 (76.64%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy TrEMBL
Match: A0A0A0KLC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33 Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy TrEMBL
Match: A0A4D6LRW0 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2282 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.9e-06 Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy TrEMBL
Match: A0A059ANL6 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00949 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of HG10016742 vs. ExPASy TrEMBL
Match: A0A2K3N1M2 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g020169 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of HG10016742 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 6.3e-06 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 0
BLAST of HG10016742 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 8.2e-06 Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of HG10016742 vs. TAIR 10
Match: AT2G23440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.4e-05 Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 0
BLAST of HG10016742 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 3.5e-04 Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|