HG10016690 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016690
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	Chr03: 7113334 .. 7114631 (+)
RNA-Seq Expression	HG10016690
Synteny	HG10016690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGACAGTCCGCAATCGCACTCGTTCTGATCTGTGCCGTCGTAGCTGGTGTCGGTGGCCAGTCCCCGGCTGCAGCTCCGACCACTACTCCAGGGGCCACCCCGCCTGCAGCAGCGAAGAATCTACCTCCAGTCGCATCTCCTATATATCCACCGACAAATTCATCTCCCGCTGCCGCTCCTCAAAAGCCGGCCACTCCAGCACCGGTTTCCACGCCTCCTTCTTCGGCGCCACCAGCAGTCGCTCCAGTAGCCTCTCCACCAGCCAGCACTCCTCCGACTGCTTCCGTTCCTGCGAGCTCTCCACCGGCTGCTTCCGTTCCACCTAGCTCTCCGCCGGCCGCTACCGTTCCAGCGAGCTCTCCACCTGTTCCAGTTCCGGTTAGTTCTCCACCAGTTCCCGTGCCAGTGAGCTCTCCTCCAGTACCAACTCCAACGGAATCTCCTCCCGCTCCTGAAAGTTCTCCTCCTGCTCCAGTCGCATCGCCACCCGTTGAGGTTCCGGCGCCGGCGCCCAGCAAGAAGAAGTCGAGGAAGCACAAAGCACCAGCTCCTTCTCCAGCGTTGCTTGGTCCACCTGCGCCTCCTTCTGAAGCCCCTGGAGGAAGCGAGGAAGGTCCTTCGCCCAGCCCTTCACTAGAGGACAAGGTAATTCAATCTCGACCTAAATCTCCGCCATTACCGTCTAAACATTAACCTGCATTATCATTCTGCTCAAGATCTGCAACATTCCATCATCAATCGGTCATTATACATATCCATAGCCAAGATCTCACTATCATTTTGATAAAATTGGTGCATGATTAGCATTCTTAGGGTTTCGGCATGGCTGCATTCACACTTGCTTGATAGCAGAGTGAATGAACTTAATGCCACGCGCCACCGTCACGCGTGGATCTAGCGCGTTTGAGGTTTTCCGTTAAGATAATTACCATGGTTGAGTCTAAAGACTAACCCAAGGTAATGAAAAAGATCAAAACGCGCCAAAGAAAAAAAAAGAATCAGAAATGTCAGAATGTCAGATCACACTACGCTCGAGATTAATAAATGTCAGTCCAGTTTTCTCAGATCACACTGAGGGAAACACGTTAAAAAATTTAATTGACTTCAGCTTTTTTTAAACCAGATCATTGATTTTAATATAAATTAATCCAATTCATAATTAAATATTGAAAAATTGCCGTGGATCTGTGATTTGTTTGCAGAGCGGAGCTGAAACATTGAGGAACCTGCAGAAGGTGGCCGGGAGTTTGGCTTTGGGATGGGCTGCCGTCGCCGTCAGCTTCATCTTCTAG

mRNA sequence

ATGGGGAGACAGTCCGCAATCGCACTCGTTCTGATCTGTGCCGTCGTAGCTGGTGTCGGTGGCCAGTCCCCGGCTGCAGCTCCGACCACTACTCCAGGGGCCACCCCGCCTGCAGCAGCGAAGAATCTACCTCCAGTCGCATCTCCTATATATCCACCGACAAATTCATCTCCCGCTGCCGCTCCTCAAAAGCCGGCCACTCCAGCACCGGTTTCCACGCCTCCTTCTTCGGCGCCACCAGCAGTCGCTCCAGTAGCCTCTCCACCAGCCAGCACTCCTCCGACTGCTTCCGTTCCTGCGAGCTCTCCACCGGCTGCTTCCGTTCCACCTAGCTCTCCGCCGGCCGCTACCGTTCCAGCGAGCTCTCCACCTGTTCCAGTTCCGGTTAGTTCTCCACCAGTTCCCGTGCCAGTGAGCTCTCCTCCAGTACCAACTCCAACGGAATCTCCTCCCGCTCCTGAAAGTTCTCCTCCTGCTCCAGTCGCATCGCCACCCGTTGAGGTTCCGGCGCCGGCGCCCAGCAAGAAGAAGTCGAGGAAGCACAAAGCACCAGCTCCTTCTCCAGCGTTGCTTGGTCCACCTGCGCCTCCTTCTGAAGCCCCTGGAGGAAGCGAGGAAGGTCCTTCGCCCAGCCCTTCACTAGAGGACAAGAGCGGAGCTGAAACATTGAGGAACCTGCAGAAGGTGGCCGGGAGTTTGGCTTTGGGATGGGCTGCCGTCGCCGTCAGCTTCATCTTCTAG

Coding sequence (CDS)

ATGGGGAGACAGTCCGCAATCGCACTCGTTCTGATCTGTGCCGTCGTAGCTGGTGTCGGTGGCCAGTCCCCGGCTGCAGCTCCGACCACTACTCCAGGGGCCACCCCGCCTGCAGCAGCGAAGAATCTACCTCCAGTCGCATCTCCTATATATCCACCGACAAATTCATCTCCCGCTGCCGCTCCTCAAAAGCCGGCCACTCCAGCACCGGTTTCCACGCCTCCTTCTTCGGCGCCACCAGCAGTCGCTCCAGTAGCCTCTCCACCAGCCAGCACTCCTCCGACTGCTTCCGTTCCTGCGAGCTCTCCACCGGCTGCTTCCGTTCCACCTAGCTCTCCGCCGGCCGCTACCGTTCCAGCGAGCTCTCCACCTGTTCCAGTTCCGGTTAGTTCTCCACCAGTTCCCGTGCCAGTGAGCTCTCCTCCAGTACCAACTCCAACGGAATCTCCTCCCGCTCCTGAAAGTTCTCCTCCTGCTCCAGTCGCATCGCCACCCGTTGAGGTTCCGGCGCCGGCGCCCAGCAAGAAGAAGTCGAGGAAGCACAAAGCACCAGCTCCTTCTCCAGCGTTGCTTGGTCCACCTGCGCCTCCTTCTGAAGCCCCTGGAGGAAGCGAGGAAGGTCCTTCGCCCAGCCCTTCACTAGAGGACAAGAGCGGAGCTGAAACATTGAGGAACCTGCAGAAGGTGGCCGGGAGTTTGGCTTTGGGATGGGCTGCCGTCGCCGTCAGCTTCATCTTCTAG

Protein sequence

MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAAAPQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVAGSLALGWAAVAVSFIF

Homology

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BLAST of HG10016690 vs. NCBI nr
Match: NP_001267612.1 (arabinogalactan protein precursor [Cucumis sativus] >KGN48577.1 hypothetical protein Csa_003859 [Cucumis sativus] >BAA81686.1 unnamed protein product [Cucumis sativus] >BAC75541.1 arabinogalactan protein [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 3.4e-92
Identity = 223/246 (90.65%), Postives = 228/246 (92.68%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP ATPP AA   PP ASP+  PTN SPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAATYPPPAASPVSTPTNPSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPP+SAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVPVSSPPV VPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKS+K
Sbjct: 121 SSPPVPVPVSSPPVSVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVAGSLALGWAAV 240
           H+APAPSPALLGPPAPPSEAP GSEEGP+PSPSLEDKSGAE    L KVAGSLALGWAAV
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPAPSPSLEDKSGAEA---LMKVAGSLALGWAAV 240

Query: 241 AVSFIF 247
           AVS IF
Sbjct: 241 AVSIIF 243

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BLAST of HG10016690 vs. NCBI nr
Match: XP_008440341.2 (PREDICTED: lysine-rich arabinogalactan protein 18-like [Cucumis melo])

HSP 1 Score: 349.0 bits (894), Expect = 3.4e-92
Identity = 225/246 (91.46%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVA VGGQSPAAAPTTTP ATPP AAK  PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPP+SAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPP EVPAPAPS KKS+K
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVAGSLALGWAAV 240
           H+APAPSPALLGPPAPPSEAP GSEEGPSPSPSLEDKSGAE    L KVAGSLALGWAAV
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEA---LMKVAGSLALGWAAV 240

Query: 241 AVSFIF 247
           AVS IF
Sbjct: 241 AVSIIF 242

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BLAST of HG10016690 vs. NCBI nr
Match: XP_022963306.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita moschata])

HSP 1 Score: 321.2 bits (822), Expect = 7.6e-84
Identity = 208/247 (84.21%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP    P AAKN PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKNPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPP ATVPA
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPP-ATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVP SSPPVPVP SSPPVPTP ESPPAPE++PPAPVASPP EVP+PAPSKKKS+K
Sbjct: 121 SSPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETL-RNLQKVAGSLALGWAA 240
           HKAPAPSPALLGPPAPPSEAPGGSEEGP+P+PSL+DKSGAE L RN+QKV GSLALG++A
Sbjct: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPTPAPSLDDKSGAEALRRNMQKVVGSLALGFSA 240

Query: 241 VAVSFIF 247
              SF+F
Sbjct: 241 AVFSFMF 241

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BLAST of HG10016690 vs. NCBI nr
Match: XP_023003133.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 318.5 bits (815), Expect = 4.9e-83
Identity = 210/256 (82.03%), Postives = 220/256 (85.94%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP    P AAK  PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPA----- 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPPA     
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 121 ----ATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAP 180
               ATVPASSPPVPVP SSPPVPVP SSPPVPTP ESPPAPES+PPAPVASPP EVP+P
Sbjct: 121 SSPPATVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPSP 180

Query: 181 APSKKKSRKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETL-RNLQKVA 240
           APSKKKS+KHKAPAPSPALLGPPAPPSEAPGGSEEGPSP+PSL+DKSGAE L RN+QKV 
Sbjct: 181 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRRNMQKVV 240

Query: 241 GSLALGWAAVAVSFIF 247
           GSLALG++A   SF+F
Sbjct: 241 GSLALGFSAAVFSFMF 251

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BLAST of HG10016690 vs. NCBI nr
Match: XP_023517454.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.8 bits (813), Expect = 8.4e-83
Identity = 207/247 (83.81%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP    P AAK  PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKP TPAPVST     PP VAPVASPPASTPPTASVPASSPPAASVP SSPP ATVPA
Sbjct: 61  APQKPVTPAPVST-----PPVVAPVASPPASTPPTASVPASSPPAASVPASSPP-ATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVP SSPPVPVP SSPPVPTP ESPPAPE++PPAPVASPP EVP+PAPSKKKS+K
Sbjct: 121 SSPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLR-NLQKVAGSLALGWAA 240
           HKAPAPSPALLGPPAPPSEAPGGSEEGPSP+PSL+DKSGAE LR N+QKV GSLALG++A
Sbjct: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRKNMQKVVGSLALGFSA 240

Query: 241 VAVSFIF 247
              SF+F
Sbjct: 241 AVFSFMF 241

[Close]

BLAST of HG10016690 vs. ExPASy Swiss-Prot
Match: Q9FPR2 (Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-24
Identity = 117/251 (46.61%), Postives = 146/251 (58.17%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R   + + LIC VVAGVGGQSP ++PT +P  T P+A     P  SP   P  +SP  
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPTKSP--TTPSA-----PTTSPTKSPAVTSP-- 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                 T AP  TP +SA    +PV SP +  P              V  SSPP   VP 
Sbjct: 61  ------TTAPAKTPTASAS---SPVESPKSPAP--------------VSESSPPPTPVPE 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSK----- 180
           SSPPVP P+    V  PVSSPPVP P         SPPAPVA+P  +VPAPAPSK     
Sbjct: 121 SSPPVPAPM----VSSPVSSPPVPAPV------ADSPPAPVAAPVADVPAPAPSKHKKTT 180

Query: 181 KKSRKHK-APAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVA-GSL 240
           KKS+KH+ APAP+P LLGPPAPP+E+PG + +  SP PS +D+SGA + R L+ VA G++
Sbjct: 181 KKSKKHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQSGAASTRVLRNVAVGAV 209

Query: 241 ALGWAAVAVSF 245
           A  WA + ++F
Sbjct: 241 ATAWAVLVMAF 209

[Close]

BLAST of HG10016690 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 8.9e-11
Identity = 102/241 (42.32%), Postives = 132/241 (54.77%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R  AIA++ I  ++AGV GQ+P + PT TP                   PPT ++P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPA------------------PPTPTTPPP 60

Query: 61  APQKPATPAPVSTPP--SSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATV 120
           A    ATP PVS PP  +++PP V   A PPA+ PP    P SSPP AS PP++PP    
Sbjct: 61  A----ATPPPVSAPPPVTTSPPPVT-TAPPPANPPP----PVSSPPPASPPPATPP---- 120

Query: 121 PASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKS 180
           P +SP  P PV+SPP   P + PPV TP          PPAP+ASPP +VPAPAP+ K  
Sbjct: 121 PVASP--PPPVASPP---PATPPPVATP----------PPAPLASPPAQVPAPAPTTKPD 180

Query: 181 RKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPS---LEDKSGAETLRNLQKVAGSLAL 237
               +P+PSP+   PP P S+APG S +  SP+PS   + D++GA       K+  SL  
Sbjct: 181 ----SPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGA------SKMVSSLVF 183

[Close]

BLAST of HG10016690 vs. ExPASy Swiss-Prot
Match: O22194 (Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=AGP17 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.4e-08
Identity = 89/251 (35.46%), Postives = 118/251 (47.01%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R   + + LIC V   VGGQSPA AP                            SP+ 
Sbjct: 1   MTRNILLTVTLICIVFITVGGQSPATAPI--------------------------HSPST 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           +P KP         P+S      P  SP A TP +   PA +                  
Sbjct: 61  SPHKP--------KPTS------PAISPAAPTPESTEAPAKT------------------ 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPA--PSKKKS 180
              PV  PV +PP P P S+P +  P  SP A   +P AP  +P  +VPAPA    KKK+
Sbjct: 121 ---PVEAPVEAPPSPTPASTPQISPPAPSPEA--DTPSAPEIAPSADVPAPALTKHKKKT 180

Query: 181 RKHK-APAPSPA--LLGPPAPPSEAPGGSEEGPSP--SPSLEDKSGAETLRNLQKVAGSL 240
           +KHK APAP PA  LL PPAPP EAPG    GPS   SP+ +D+SGA+ +  + ++ G+ 
Sbjct: 181 KKHKTAPAPGPASELLSPPAPPGEAPG---PGPSDAFSPAADDQSGAQRISVVIQMVGAA 185

Query: 241 ALGWAAVAVSF 245
           A+ W+ + ++F
Sbjct: 241 AIAWSLLVLAF 185

[Close]

BLAST of HG10016690 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-06
Identity = 90/230 (39.13%), Postives = 114/230 (49.57%), Query Frame = 0


Query: 8   ALVLICAVVA--GVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSP----AAA 67
           +L+L  A+++   V  Q PAA+P T+    PP      P  A+P  PPT ++P    A  
Sbjct: 9   SLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAP--PPTTTTPPVSAAQP 68

Query: 68  PQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPAS 127
           P  P TP P  TP S   P VAPV SP    P     P +S P  S PP SPP    PA 
Sbjct: 69  PASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPP----PAP 128

Query: 128 SPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSP----PAPVASPPVEVPAPAPSKKK 187
           + P P P S PP P   +SPP P P   PPAP S P    P+P++ PP   PAP   K+K
Sbjct: 129 TSPPPTPASPPPAP---ASPP-PAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRK 188

Query: 188 ---SRKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLR 225
               R H APAP+P    PP+PP       +  P+PSP+    +    L+
Sbjct: 189 HKHKRHHHAPAPAPIPPSPPSPP-VLTDPQDTAPAPSPNTNGGNALNQLK 227

[Close]

BLAST of HG10016690 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.2e-04
Identity = 86/201 (42.79%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 24  PAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAAAPQKPATPAPVS-TPPSSAPPAV 83
           P+ +P   P  +PP+ A  LPP  +P  P     P+ +P  P +PAP S TPPS +PP V
Sbjct: 127 PSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPP-V 186

Query: 84  APVASPPASTPPTASVPASSPPAASVPPS-SPPAATVPA-SSPPVPVPVS----SPPVPV 143
            P  +PP+  PP    PA   PA  VPPS +PP+   PA  SPP P P S    +PP PV
Sbjct: 187 PPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPV 246

Query: 144 PVS-SPPVPTPTE----SPPAPESSPPAPVASPPVEVPAPAPSKKKSRKHKAPAPSPALL 203
           P S +PP P P      +PP P S PP P   PP     P P    S     P PSPA  
Sbjct: 247 PPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPS-----PPPSPAPP 306

Query: 204 GPPAPPSEAPGGSEEGPSPSP 213
            PP PPS +P  S   PSP+P
Sbjct: 307 TPPTPPSPSP-PSPVPPSPAP 320

[Close]

BLAST of HG10016690 vs. ExPASy TrEMBL
Match: Q9XIV1 (Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92
Identity = 223/246 (90.65%), Postives = 228/246 (92.68%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP ATPP AA   PP ASP+  PTN SPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPAATPPVAATYPPPAASPVSTPTNPSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPP+SAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVPVSSPPV VPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKS+K
Sbjct: 121 SSPPVPVPVSSPPVSVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVAGSLALGWAAV 240
           H+APAPSPALLGPPAPPSEAP GSEEGP+PSPSLEDKSGAE    L KVAGSLALGWAAV
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPAPSPSLEDKSGAEA---LMKVAGSLALGWAAV 240

Query: 241 AVSFIF 247
           AVS IF
Sbjct: 241 AVSIIF 243

[Close]

BLAST of HG10016690 vs. ExPASy TrEMBL
Match: A0A1S3B0X7 (lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484821 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92
Identity = 225/246 (91.46%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVA VGGQSPAAAPTTTP ATPP AAK  PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPP+SAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPP EVPAPAPS KKS+K
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVAGSLALGWAAV 240
           H+APAPSPALLGPPAPPSEAP GSEEGPSPSPSLEDKSGAE    L KVAGSLALGWAAV
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDKSGAEA---LMKVAGSLALGWAAV 240

Query: 241 AVSFIF 247
           AVS IF
Sbjct: 241 AVSIIF 242

[Close]

BLAST of HG10016690 vs. ExPASy TrEMBL
Match: A0A6J1HFT1 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111463555 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.7e-84
Identity = 208/247 (84.21%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP    P AAKN PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKNPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPP ATVPA
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPP-ATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVP SSPPVPVP SSPPVPTP ESPPAPE++PPAPVASPP EVP+PAPSKKKS+K
Sbjct: 121 SSPPVPVPASSPPVPVPESSPPVPTPIESPPAPETAPPAPVASPPAEVPSPAPSKKKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETL-RNLQKVAGSLALGWAA 240
           HKAPAPSPALLGPPAPPSEAPGGSEEGP+P+PSL+DKSGAE L RN+QKV GSLALG++A
Sbjct: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPTPAPSLDDKSGAEALRRNMQKVVGSLALGFSA 240

Query: 241 VAVSFIF 247
              SF+F
Sbjct: 241 AVFSFMF 241

[Close]

BLAST of HG10016690 vs. ExPASy TrEMBL
Match: A0A6J1KVL2 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111496835 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.4e-83
Identity = 210/256 (82.03%), Postives = 220/256 (85.94%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVAGVGGQSPAAAPTTTP    P AAK  PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAGVGGQSPAAAPTTTPATPAPVAAKYPPPAASPVVPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPA----- 120
           APQKP TPAPVST     PPAVAPVASPPASTPPTASVPASSPPAASVP SSPPA     
Sbjct: 61  APQKPVTPAPVST-----PPAVAPVASPPASTPPTASVPASSPPAASVPASSPPAASVPA 120

Query: 121 ----ATVPASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAP 180
               ATVPASSPPVPVP SSPPVPVP SSPPVPTP ESPPAPES+PPAPVASPP EVP+P
Sbjct: 121 SSPPATVPASSPPVPVPASSPPVPVPESSPPVPTPIESPPAPESAPPAPVASPPAEVPSP 180

Query: 181 APSKKKSRKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETL-RNLQKVA 240
           APSKKKS+KHKAPAPSPALLGPPAPPSEAPGGSEEGPSP+PSL+DKSGAE L RN+QKV 
Sbjct: 181 APSKKKSKKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPAPSLDDKSGAEALRRNMQKVV 240

Query: 241 GSLALGWAAVAVSFIF 247
           GSLALG++A   SF+F
Sbjct: 241 GSLALGFSAAVFSFMF 251

[Close]

BLAST of HG10016690 vs. ExPASy TrEMBL
Match: A0A5D3CP79 (Lysine-rich arabinogalactan protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004360 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.4e-82
Identity = 202/217 (93.09%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           MGRQS IALVLICAVVA VGGQSPAAAPTTTP ATPP AAK  PP ASP+ PPTNSSPAA
Sbjct: 1   MGRQSVIALVLICAVVAVVGGQSPAAAPTTTPAATPPVAAKYPPPAASPVSPPTNSSPAA 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           APQKPATPAPVSTPP+SAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA
Sbjct: 61  APQKPATPAPVSTPPASAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKSRK 180
           SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPP EVPAPAPS KKS+K
Sbjct: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPAEVPAPAPS-KKSKK 180

Query: 181 HKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDK 218
           H+APAPSPALLGPPAPPSEAP GSEEGPSPSPSLEDK
Sbjct: 181 HRAPAPSPALLGPPAPPSEAPAGSEEGPSPSPSLEDK 216

[Close]

BLAST of HG10016690 vs. TAIR 10
Match: AT4G37450.1 (arabinogalactan protein 18 )

HSP 1 Score: 112.5 bits (280), Expect = 5.0e-25
Identity = 117/251 (46.61%), Postives = 146/251 (58.17%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R   + + LIC VVAGVGGQSP ++PT +P  T P+A     P  SP   P  +SP  
Sbjct: 1   MDRNFLLTVTLICIVVAGVGGQSPISSPTKSP--TTPSA-----PTTSPTKSPAVTSP-- 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
                 T AP  TP +SA    +PV SP +  P              V  SSPP   VP 
Sbjct: 61  ------TTAPAKTPTASAS---SPVESPKSPAP--------------VSESSPPPTPVPE 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSK----- 180
           SSPPVP P+    V  PVSSPPVP P         SPPAPVA+P  +VPAPAPSK     
Sbjct: 121 SSPPVPAPM----VSSPVSSPPVPAPV------ADSPPAPVAAPVADVPAPAPSKHKKTT 180

Query: 181 KKSRKHK-APAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLRNLQKVA-GSL 240
           KKS+KH+ APAP+P LLGPPAPP+E+PG + +  SP PS +D+SGA + R L+ VA G++
Sbjct: 181 KKSKKHQAAPAPAPELLGPPAPPTESPGPNSDAFSPGPSADDQSGAASTRVLRNVAVGAV 209

Query: 241 ALGWAAVAVSF 245
           A  WA + ++F
Sbjct: 241 ATAWAVLVMAF 209

[Close]

BLAST of HG10016690 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-12
Identity = 102/241 (42.32%), Postives = 132/241 (54.77%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R  AIA++ I  ++AGV GQ+P + PT TP                   PPT ++P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPA------------------PPTPTTPPP 60

Query: 61  APQKPATPAPVSTPP--SSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATV 120
           A    ATP PVS PP  +++PP V   A PPA+ PP    P SSPP AS PP++PP    
Sbjct: 61  A----ATPPPVSAPPPVTTSPPPVT-TAPPPANPPP----PVSSPPPASPPPATPP---- 120

Query: 121 PASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKS 180
           P +SP  P PV+SPP   P + PPV TP          PPAP+ASPP +VPAPAP+ K  
Sbjct: 121 PVASP--PPPVASPP---PATPPPVATP----------PPAPLASPPAQVPAPAPTTKPD 180

Query: 181 RKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPS---LEDKSGAETLRNLQKVAGSLAL 237
               +P+PSP+   PP P S+APG S +  SP+PS   + D++GA       K+  SL  
Sbjct: 181 ----SPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGA------SKMVSSLVF 183

[Close]

BLAST of HG10016690 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 96/218 (44.04%), Postives = 122/218 (55.96%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R  AIA++ I  ++AGV GQ+P + PT TP                   PPT ++P  
Sbjct: 1   MARSFAIAVICI-VLIAGVTGQAPTSPPTATPA------------------PPTPTTPPP 60

Query: 61  APQKPATPAPVSTPP--SSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATV 120
           A    ATP PVS PP  +++PP V   A PPA+ PP    P SSPP AS PP++PP    
Sbjct: 61  A----ATPPPVSAPPPVTTSPPPVT-TAPPPANPPP----PVSSPPPASPPPATPP---- 120

Query: 121 PASSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPAPSKKKS 180
           P +SP  P PV+SPP   P + PPV TP          PPAP+ASPP +VPAPAP+ K  
Sbjct: 121 PVASP--PPPVASPP---PATPPPVATP----------PPAPLASPPAQVPAPAPTTKPD 166

Query: 181 RKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLED 217
               +P+PSP+   PP P S+APG S +  SP+PS  D
Sbjct: 181 ----SPSPSPS-SSPPLPSSDAPGPSTDSISPAPSPTD 166

[Close]

BLAST of HG10016690 vs. TAIR 10
Match: AT2G23130.1 (arabinogalactan protein 17 )

HSP 1 Score: 59.7 bits (143), Expect = 3.8e-09
Identity = 89/251 (35.46%), Postives = 118/251 (47.01%), Query Frame = 0


Query: 1   MGRQSAIALVLICAVVAGVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSPAA 60
           M R   + + LIC V   VGGQSPA AP                            SP+ 
Sbjct: 1   MTRNILLTVTLICIVFITVGGQSPATAPI--------------------------HSPST 60

Query: 61  APQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPA 120
           +P KP         P+S      P  SP A TP +   PA +                  
Sbjct: 61  SPHKP--------KPTS------PAISPAAPTPESTEAPAKT------------------ 120

Query: 121 SSPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSPPAPVASPPVEVPAPA--PSKKKS 180
              PV  PV +PP P P S+P +  P  SP A   +P AP  +P  +VPAPA    KKK+
Sbjct: 121 ---PVEAPVEAPPSPTPASTPQISPPAPSPEA--DTPSAPEIAPSADVPAPALTKHKKKT 180

Query: 181 RKHK-APAPSPA--LLGPPAPPSEAPGGSEEGPSP--SPSLEDKSGAETLRNLQKVAGSL 240
           +KHK APAP PA  LL PPAPP EAPG    GPS   SP+ +D+SGA+ +  + ++ G+ 
Sbjct: 181 KKHKTAPAPGPASELLSPPAPPGEAPG---PGPSDAFSPAADDQSGAQRISVVIQMVGAA 185

Query: 241 ALGWAAVAVSF 245
           A+ W+ + ++F
Sbjct: 241 AIAWSLLVLAF 185

[Close]

BLAST of HG10016690 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 55.5 bits (132), Expect = 7.2e-08
Identity = 90/230 (39.13%), Postives = 114/230 (49.57%), Query Frame = 0


Query: 8   ALVLICAVVA--GVGGQSPAAAPTTTPGATPPAAAKNLPPVASPIYPPTNSSP----AAA 67
           +L+L  A+++   V  Q PAA+P T+    PP      P  A+P  PPT ++P    A  
Sbjct: 9   SLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAP--PPTTTTPPVSAAQP 68

Query: 68  PQKPATPAPVSTPPSSAPPAVAPVASPPASTPPTASVPASSPPAASVPPSSPPAATVPAS 127
           P  P TP P  TP S   P VAPV SP    P     P +S P  S PP SPP    PA 
Sbjct: 69  PASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPP----PAP 128

Query: 128 SPPVPVPVSSPPVPVPVSSPPVPTPTESPPAPESSP----PAPVASPPVEVPAPAPSKKK 187
           + P P P S PP P   +SPP P P   PPAP S P    P+P++ PP   PAP   K+K
Sbjct: 129 TSPPPTPASPPPAP---ASPP-PAPASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRK 188

Query: 188 ---SRKHKAPAPSPALLGPPAPPSEAPGGSEEGPSPSPSLEDKSGAETLR 225
               R H APAP+P    PP+PP       +  P+PSP+    +    L+
Sbjct: 189 HKHKRHHHAPAPAPIPPSPPSPP-VLTDPQDTAPAPSPNTNGGNALNQLK 227

The following BLAST results are available for this feature:

BLAST of HG10016690 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267612.1	3.4e-92	90.65	arabinogalactan protein precursor [Cucumis sativus] >KGN48577.1 hypothetical pro...	[more]
XP_008440341.2	3.4e-92	91.46	PREDICTED: lysine-rich arabinogalactan protein 18-like [Cucumis melo]	[more]
XP_022963306.1	7.6e-84	84.21	lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]	[more]
XP_023003133.1	4.9e-83	82.03	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
XP_023517454.1	8.4e-83	83.81	lysine-rich arabinogalactan protein 18-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10016690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPR2	7.0e-24	46.61	Lysine-rich arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=AGP18 ...	[more]
Q9C5S0	8.9e-11	42.32	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1...	[more]
O22194	5.4e-08	35.46	Lysine-rich arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=AGP17 ...	[more]
Q9S740	1.0e-06	39.13	Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ...	[more]
Q9FPQ6	6.2e-04	42.79	Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=...	[more]

BLAST of HG10016690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q9XIV1	1.6e-92	90.65	Arabinogalactan protein OS=Cucumis sativus OX=3659 GN=Csa_6G493850 PE=2 SV=1	[more]
A0A1S3B0X7	1.6e-92	91.46	lysine-rich arabinogalactan protein 18-like OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A6J1HFT1	3.7e-84	84.21	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KVL2	2.4e-83	82.03	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3CP79	3.4e-82	93.09	Lysine-rich arabinogalactan protein 18-like OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of HG10016690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37450.1	5.0e-25	46.61	arabinogalactan protein 18	[more]
AT2G14890.1	6.3e-12	42.32	arabinogalactan protein 9	[more]
AT2G14890.2	1.4e-11	44.04	arabinogalactan protein 9	[more]
AT2G23130.1	3.8e-09	35.46	arabinogalactan protein 17	[more]
AT1G68725.1	7.2e-08	39.13	arabinogalactan protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 76..93 score: 36.67 coord: 94..119 score: 29.23 coord: 37..58 score: 29.09 coord: 59..75 score: 27.06 coord: 25..37 score: 46.15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..222
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 93..243
None	No IPR available	PANTHER	PTHR37209:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 1..126
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 93..243 coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016690.1	HG10016690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane