
HG10016642 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCTTCGAGCCGGATGTTGTCCAAAGTACGAGATTTCTACATAAAAAGCCTGACGGACTGTTCCAACCATCTGGATTATGGGATGGCCCTGAGCGGGCCGGCCGGTCAGGTGCCGAGCCATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCCAGCCACGGAGGCGACGACTACGGTGAGCTTCTGAGGGCGGCGTCGATTCGAAGCATGAGCAAGAAAGTGGAACCCGATTTGGAGGCGAGGAAATCGCCGATGAGGGGCGAACCGAAGAACGTGGTGGCGAGGAGCCAGAGCGTGGGGATTGGGAGAATTGACGAAGACAAAACCTATGAATTTGAAGAGGAATTCAAGGTCAGTAATTCTAATGCGTATCCCAGAAGCAAAAGCTACGCTGTTCATAGAAGAACATCAAGACGAGTGTATTGATATTGAAATTATAACTCTCTGAAATTCTTGGTCCATTATATTTAATTCCATAGTGTGATTAATTTTGGTATTTCCGTATTGTTGGAATTTAATTATATATATATATGTGTGTGTGTGTGTGTATGTCAAATTATAGAAACTATATATTCTTCTCGTTTTATAATGTCGAAATTGATCAAAGTCGCAAGAAGAAAGAATCTACGGGAGAGGCAGAGGAGTTGAAATTGGGACGTGCCGGCCGATTATTGATTATTCTTATCTCCGATTGTAACGCGCTCATCCATTGA ATGGAGACTATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCTTCGAGCCGGATGTTGTCCAAAGTACGAGATTTCTACATAAAAAGCCTGACGGACTGTTCCAACCATCTGGATTATGGGATGGCCCTGAGCGGGCCGGCCGGTCAGGTGCCGAGCCATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCCAGCCACGGAGGCGACGACTACGGTGAGCTTCTGAGGGCGGCGTCGATTCGAAGCATGAGCAAGAAAGTGGAACCCGATTTGGAGGCGAGGAAATCGCCGATGAGGGGCGAACCGAAGAACGTGGTGGCGAGGAGCCAGAGCGTGGGGATTGGGAGAATTGACGAAGACAAAACCTATGAATTTGAAGAGGAATTCAAGGTCAGTAATTCTAATGCGTATCCCAGAAGCAAAAGCTACGCTGTTCATAGAAGAACATCAAGACGAGTAAACTATATATTCTTCTCGTTTTATAATGTCGAAATTGATCAAAGTCGCAAGAAGAAAGAATCTACGGGAGAGGCAGAGGAGTTGAAATTGGGACGTGCCGGCCGATTATTGATTATTCTTATCTCCGATTGTAACGCGCTCATCCATTGA ATGGAGACTATAAAAAACGGCGATCAAGGGAAGAAGATGAACAAAGGAAACAAATTGAGCCAACTAGTAAAAGCTTCGAGCCGGATGTTGTCCAAAGTACGAGATTTCTACATAAAAAGCCTGACGGACTGTTCCAACCATCTGGATTATGGGATGGCCCTGAGCGGGCCGGCCGGTCAGGTGCCGAGCCATCTGCCCAGGAGTTACAGCGTGGGGTCCACCGCCTCCAGCCACGGAGGCGACGACTACGGTGAGCTTCTGAGGGCGGCGTCGATTCGAAGCATGAGCAAGAAAGTGGAACCCGATTTGGAGGCGAGGAAATCGCCGATGAGGGGCGAACCGAAGAACGTGGTGGCGAGGAGCCAGAGCGTGGGGATTGGGAGAATTGACGAAGACAAAACCTATGAATTTGAAGAGGAATTCAAGGTCAGTAATTCTAATGCGTATCCCAGAAGCAAAAGCTACGCTGTTCATAGAAGAACATCAAGACGAGTAAACTATATATTCTTCTCGTTTTATAATGTCGAAATTGATCAAAGTCGCAAGAAGAAAGAATCTACGGGAGAGGCAGAGGAGTTGAAATTGGGACGTGCCGGCCGATTATTGATTATTCTTATCTCCGATTGTAACGCGCTCATCCATTGA METIKNGDQGKKMNKGNKLSQLVKASSRMLSKVRDFYIKSLTDCSNHLDYGMALSGPAGQVPSHLPRSYSVGSTASSHGGDDYGELLRAASIRSMSKKVEPDLEARKSPMRGEPKNVVARSQSVGIGRIDEDKTYEFEEEFKVSNSNAYPRSKSYAVHRRTSRRVNYIFFSFYNVEIDQSRKKKESTGEAEELKLGRAGRLLIILISDCNALIH Homology
BLAST of HG10016642 vs. NCBI nr
Match: XP_022132695.1 (uncharacterized protein LOC111005494 [Momordica charantia]) HSP 1 Score: 246.1 bits (627), Expect = 2.7e-61 Identity = 127/161 (78.88%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of HG10016642 vs. NCBI nr
Match: KAA0036403.1 (uncharacterized protein E6C27_scaffold18G002050 [Cucumis melo var. makuwa] >TYK12799.1 uncharacterized protein E5676_scaffold255G003890 [Cucumis melo var. makuwa]) HSP 1 Score: 240.0 bits (611), Expect = 1.9e-59 Identity = 135/172 (78.49%), Postives = 149/172 (86.63%), Query Frame = 0
BLAST of HG10016642 vs. NCBI nr
Match: KGN48992.2 (hypothetical protein Csa_003129 [Cucumis sativus]) HSP 1 Score: 233.8 bits (595), Expect = 1.4e-57 Identity = 132/167 (79.04%), Postives = 145/167 (86.83%), Query Frame = 0
BLAST of HG10016642 vs. NCBI nr
Match: XP_023543992.1 (uncharacterized protein LOC111803699 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.1 bits (575), Expect = 2.9e-55 Identity = 124/165 (75.15%), Postives = 142/165 (86.06%), Query Frame = 0
BLAST of HG10016642 vs. NCBI nr
Match: XP_022978000.1 (uncharacterized protein LOC111478121 [Cucurbita maxima]) HSP 1 Score: 224.6 bits (571), Expect = 8.4e-55 Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 0
BLAST of HG10016642 vs. ExPASy TrEMBL
Match: A0A6J1BT69 (uncharacterized protein LOC111005494 OS=Momordica charantia OX=3673 GN=LOC111005494 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61 Identity = 127/161 (78.88%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of HG10016642 vs. ExPASy TrEMBL
Match: A0A5A7T0J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003890 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 9.3e-60 Identity = 135/172 (78.49%), Postives = 149/172 (86.63%), Query Frame = 0
BLAST of HG10016642 vs. ExPASy TrEMBL
Match: A0A0A0KLJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495800 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 8.7e-58 Identity = 132/165 (80.00%), Postives = 144/165 (87.27%), Query Frame = 0
BLAST of HG10016642 vs. ExPASy TrEMBL
Match: A0A6J1INU9 (uncharacterized protein LOC111478121 OS=Cucurbita maxima OX=3661 GN=LOC111478121 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 4.1e-55 Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 0
BLAST of HG10016642 vs. ExPASy TrEMBL
Match: A0A6J1GGE2 (uncharacterized protein LOC111453674 OS=Cucurbita moschata OX=3662 GN=LOC111453674 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 6.9e-55 Identity = 123/165 (74.55%), Postives = 140/165 (84.85%), Query Frame = 0
BLAST of HG10016642 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-12 Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 0
BLAST of HG10016642 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-12 Identity = 53/160 (33.12%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of HG10016642 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 4.2e-04 Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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