HG10016501 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016501
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Translation initiation factor IF-2, putative isoform 1
Location	Chr03: 5486738 .. 5489179 (-)
RNA-Seq Expression	HG10016501
Synteny	HG10016501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGGCGAAAGGCGAAGAAAACAGTTAAGAAGTCCAGCCTTTCACCTGTACGAGAAGCAAAGGATGAAGCAGCAAATGACGAGGATGGTATGTTGAAATTCGTAGTGATTCCGATCCTTTTTCCCGAAGCCGGAATTTAAGTGAAGGAAAATTGTTTTTTTTTCCCCTCTTCCGGCGACTAATTGTCCGCGGATTTAACATAATTGTTCCGCTGCTTTCGCCTTCACTTGTGTTTAGTTGAACGGCATGCTGCTGCAATCTGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAAAAACTTCCAAGCTTGTCCATTTCGAGAAGAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAATTACACACCAATCCAGCTGATGGAATAGATATACATGCTTCTCTCCTTCATCGCCTGTCCACAGCTTATCCTAACTACTCTGCTGGAATGCGATCTTTTAATGGATTTGAATTTTCCAGTAAATCAGGTATCTGTAGATTTTGGATTTTGTTGCGCGTTCTGATTGGTAACTGCTCCCTTATATGACGTTTCTTTGCTGCAACTCATCTTCTTTCCTCTGCTGGTGGCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATCCCGAACTTCGTAAGTAATTTTTCATTGTATATCTTAAATTGTATCGTAGTAGAACGATTGACACCTTGCGAGCTCACAAATATGATTTAGCTTGTCTATATCTTTTGTTTCATGTTGTTGATTTGTGGAAGAACGCTACTAGAAATATAACCGTGTACTATTTGGTGTTGACTTATATATTTATTGACAATTCTTGATTTTAGGTTTTGGAGGAGCCCTCGGATAATGTGGTTCTCGGCATGCCAGACATACTCCAAACTCCTGGGGTTCGCATCTTTATGGTTTTTGCACATCGATTACTGCATTAGCCTTTTCATGTTAATATCCCATAGTTGTCTGATATAGCCATTTTTTCAATATTTGGTGGTGTTTTTACTCAAAATCTCTGGGCACATAGACGGTCCGGGTCAAAGGAATAGAATTATTGTAGTGATAGTGTGTCTGCAATCAATTATTGATGTTTTGTTTTCAATAATTAAAGATGTTTTGTTTTAAACACTAAGGGTGTCTAAGCTTAGCTAACTTATGTATATAAACTAATTATTGACGACTATCTAGACTTTATTAGCTTGATCTTGAGCTTCAATAAGTTTGAATACATGACGTCTTGGTAATAAGTTGGGATCTTGTTGCTCACCATTGGTTAGGCTTAGTGGTTAATAAAGTCCAATGTAAATAGTGCAAACAACTTAAAGAGAATGAGTTCAACACATGGTGACCACCTCGCCTGCCAAAGATTTGATAACCTACGAGTTTTTTGACAACAAAATTAGGGTCACGGTTAGATGGTTTTTTTCGGTGAGGATGGTTGAGGCGCACAAGCTGACCTTATGAAGACTCCTTTGTATACGCATTGGTAAATTGAAATAAACTTTGTAACTAGTATTGGTTTGAACTTTGTTATCAAATAAGTATTGCTTTTACAATAGGATGCTGTTTGAAATTTGAAAATACTAGTTTTTGGTACATTGGATTGTAGTTTTGTTTTTTCCTCCCTCTTTTAGCGCTTCATTTTGGATTTTATTATTTCTACTCGAGTCTTCAGTAAATGTTCCTATGGATGTCAATACCATGATAAATGTTGTTCATTTATATATGTTCTCTGCCATCATCTATTGGTCAATATTATCAACTAGTAGAGAAATTAATTCCCGGGCTAAGTTGCAAAAAAGTTATTGGGAGGCATTAGTCGATCATTTATCATTAAAAGTATAATTTAGCGCGTCAAAAATAATCACTCAGTGTGACTAGATTGTAGAGGGAATGATGGAAGTGCTGGTTTCATTTCAAGTCATAATTACCATTATAACTATTACAGATATGGATAAAAATCATTTATTGACAGAAAAAGATCTAGAAAAAGCTAGGGAAATTCTTGACCCATGGAAGGAAGCTGCATAGATGAATTTTTCCAAGTACAAAAATCAGCATGGCTATTACTAAAAAAACATGTAAAGCTTACATTTTAGTAACATCTCAGGCTTGTTTGAGGAATTGTCTCAACAAAACTTTCTTAAGGCTGTTTTTCCTCTATTTAATGTATTCTACAATAAGCTAACGTTCTCGTTCCTTAGGTGAGTAACCAAAGACTGTCCTTTGGGATGACACCGAAAACCCGAAGATTGCCAAAGCCGGGTGAGATGCTTGTGTCTATCCATGGATCCCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGGTATGTTCATTTAG

mRNA sequence

ATGGCAAGGCGAAAGGCGAAGAAAACAGTTAAGAAGTCCAGCCTTTCACCTGTACGAGAAGCAAAGGATGAAGCAGCAAATGACGAGGATGTTGAACGGCATGCTGCTGCAATCTGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAAAAACTTCCAAGCTTGTCCATTTCGAGAAGAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAATTACACACCAATCCAGCTGATGGAATAGATATACATGCTTCTCTCCTTCATCGCCTGTCCACAGCTTATCCTAACTACTCTGCTGGAATGCGATCTTTTAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATCCCGAACTTCGTTTTGGAGGAGCCCTCGGATAATGTGGTTCTCGGCATGCCAGACATACTCCAAACTCCTGGGGTGAGTAACCAAAGACTGTCCTTTGGGATGACACCGAAAACCCGAAGATTGCCAAAGCCGGGTGAGATGCTTGTGTCTATCCATGGATCCCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGGTATGTTCATTTAG

Coding sequence (CDS)

ATGGCAAGGCGAAAGGCGAAGAAAACAGTTAAGAAGTCCAGCCTTTCACCTGTACGAGAAGCAAAGGATGAAGCAGCAAATGACGAGGATGTTGAACGGCATGCTGCTGCAATCTGTGCCATTCGGGATGTGGAGATCGAGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAAAAACTTCCAAGCTTGTCCATTTCGAGAAGAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAATTACACACCAATCCAGCTGATGGAATAGATATACATGCTTCTCTCCTTCATCGCCTGTCCACAGCTTATCCTAACTACTCTGCTGGAATGCGATCTTTTAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATCCCGAACTTCGTTTTGGAGGAGCCCTCGGATAATGTGGTTCTCGGCATGCCAGACATACTCCAAACTCCTGGGGTGAGTAACCAAAGACTGTCCTTTGGGATGACACCGAAAACCCGAAGATTGCCAAAGCCGGGTGAGATGCTTGTGTCTATCCATGGATCCCCCCTTGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGGTATGTTCATTTAG

Protein sequence

MARRKAKKTVKKSSLSPVREAKDEAANDEDVERHAAAICAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHASLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPDILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGMFI

Homology

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BLAST of HG10016501 vs. NCBI nr
Match: KAA0034696.1 (Translation initiation factor IF-2, putative isoform 1 [Cucumis melo var. makuwa] >TYK09247.1 Translation initiation factor IF-2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-109
Identity = 212/234 (90.60%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAA------NDEDVERHAAAICAIRDVEIERLITELR 60
           MARRKAKKTVKKSS S  R AKDEAA      +DEDVERHAAAI AIRDVEIERLITELR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEVQWKDTEDELHTNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 121 SLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPD 180
           SLLHRLSTAYP  SAGMRSFNGFEFSSKSVKTNPFN ENLQIPNFVLEEPSDN+VLGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 181 ILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGMFI 229
           ILQTPG+SNQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHG+FI
Sbjct: 181 ILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGIFI 234

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BLAST of HG10016501 vs. NCBI nr
Match: KAG6604007.1 (hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108
Identity = 210/236 (88.98%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAAN------------DEDVERHAAAICAIRDVEIER 60
           MARRKAKK+VKKSS SP+REAKD +AN            DEDVERHA AI AIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPIREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNV 180
           GIDIHASLLHRLSTAYPN SAGMRSFNGFEFSSKSVKTNPFNVENLQIPNF LEEPSDN+
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 VLGMPDILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           VLGMPD+LQTPGVSNQRLS GMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAIH
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREDNMEAIH 236

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BLAST of HG10016501 vs. NCBI nr
Match: XP_004143493.2 (uncharacterized protein LOC101215210 [Cucumis sativus] >KAE8647570.1 hypothetical protein Csa_004420 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108
Identity = 210/224 (93.75%), Postives = 212/224 (94.64%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAANDEDVERHAAAICAIRDVEIERLITELRLLRSYF 60
           MARRKAKKTVKKSS SP+ EAKDEAANDEDVERHAAAI AIRDVEI RLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWKDTEDEL TNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 STAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPDILQTPG 180
           S AYPN SAGMRSFNGFEFSSKSVKTNPF VENLQIPNFVLEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180

Query: 181 VSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           VSNQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 224

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BLAST of HG10016501 vs. NCBI nr
Match: XP_023543921.1 (uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.6 bits (1028), Expect = 9.1e-108
Identity = 209/236 (88.56%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAAN------------DEDVERHAAAICAIRDVEIER 60
           MARRKAKK+VKKSS SPVREAKD +AN            DEDVERHA AI AIRDVEIER
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWK+TEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNV 180
           GIDIHASLLHRLSTAYPN SAGMRSFNGFEFSSKSVKTNPFNVENLQIPNF LEEPSDN+
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 VLGMPDILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           VLGMPD+LQTPGVSNQRLS GMTPKTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIH
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREENMEAIH 236

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BLAST of HG10016501 vs. NCBI nr
Match: XP_038891412.1 (uncharacterized protein LOC120080833 [Benincasa hispida] >XP_038891413.1 uncharacterized protein LOC120080833 [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 9.1e-108
Identity = 210/230 (91.30%), Postives = 215/230 (93.48%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAAN------DEDVERHAAAICAIRDVEIERLITELR 60
           MARR+AKKTVKKSS SP R+AKDEAAN      DEDVERHAAAI AIRDVEIERLITELR
Sbjct: 1   MARRRAKKTVKKSSPSPGRDAKDEAANELKSDCDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLP+LSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPNLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120

Query: 121 SLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPD 180
           SLLH LSTAYP  SAGMRSFNGFEFSSKSVKTNPFNVENLQIPN  LEEPSDN+VLGMP+
Sbjct: 121 SLLHCLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNLALEEPSDNMVLGMPE 180

Query: 181 ILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           ILQTPGVSNQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 ILQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 230

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BLAST of HG10016501 vs. ExPASy TrEMBL
Match: A0A5A7SXV4 (Translation initiation factor IF-2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002410 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 212/234 (90.60%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAA------NDEDVERHAAAICAIRDVEIERLITELR 60
           MARRKAKKTVKKSS S  R AKDEAA      +DEDVERHAAAI AIRDVEIERLITELR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEVQWKDTEDELHTNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 121 SLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPD 180
           SLLHRLSTAYP  SAGMRSFNGFEFSSKSVKTNPFN ENLQIPNFVLEEPSDN+VLGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 181 ILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGMFI 229
           ILQTPG+SNQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHG+FI
Sbjct: 181 ILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHGIFI 234

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BLAST of HG10016501 vs. ExPASy TrEMBL
Match: A0A0A0KK81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501280 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.8e-109
Identity = 210/224 (93.75%), Postives = 212/224 (94.64%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAANDEDVERHAAAICAIRDVEIERLITELRLLRSYF 60
           MARRKAKKTVKKSS SP+ EAKDEAANDEDVERHAAAI AIRDVEIERLIT LRLLRSYF
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIERLITVLRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWKDTEDEL TNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 STAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPDILQTPG 180
           S AYPN SAGMRSFNGFEFSSKSVKTNPF VENLQIPNFVLEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180

Query: 181 VSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           VSNQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 224

[Close]

BLAST of HG10016501 vs. ExPASy TrEMBL
Match: A0A1S4DWB9 (uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 209/230 (90.87%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAA------NDEDVERHAAAICAIRDVEIERLITELR 60
           MARRKAKKTVKKSS S  R AKDEAA      +DEDVERHAAAI AIRDVEIERLITELR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEVQWKDTEDELHTNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 121 SLLHRLSTAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPD 180
           SLLHRLSTAYP  SAGMRSFNGFEFSSKSVKTNPFN ENLQIPNFVLEEPSDN+VLGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 181 ILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           ILQTPG+SNQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 ILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 230

[Close]

BLAST of HG10016501 vs. ExPASy TrEMBL
Match: A0A5D3CLG2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002490 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 208/224 (92.86%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAANDEDVERHAAAICAIRDVEIERLITELRLLRSYF 60
           MARRKAKKTVKKS+ SPV EAKDE ANDEDVERHAAAI AIRDVEI RLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWKDTEDEL TNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 STAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPDILQTPG 180
           S AYPN SAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+VLGMPDILQTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           V NQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 224

[Close]

BLAST of HG10016501 vs. ExPASy TrEMBL
Match: A0A1S3B1M1 (uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 208/224 (92.86%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MARRKAKKTVKKSSLSPVREAKDEAANDEDVERHAAAICAIRDVEIERLITELRLLRSYF 60
           MARRKAKKTVKKS+ SPV EAKDE ANDEDVERHAAAI AIRDVEI RLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWKDTEDEL TNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 STAYPNYSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMPDILQTPG 180
           S AYPN SAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+VLGMPDILQTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 225
           V NQRLS GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIH 224

[Close]

BLAST of HG10016501 vs. TAIR 10
Match: AT4G39630.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-51
Identity = 120/232 (51.72%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MARRKAKKTVK-----KSSLSPVR-EAKDEAANDEDVERHAAAICAIRDVEIERLITELR 60
           M +RKAK+ VK     ++    +R E K E   DE+VER  AAI AIRDVEIE+++T LR
Sbjct: 1   MPKRKAKECVKLTEEDRNDEKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQMLTALR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPADGIDIHA 120
           LLRSYF +EQL TP+L FF+E LP LSISR  E GEIE++W+D   +      +G+D++ 
Sbjct: 61  LLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNENGVDMNY 120

Query: 121 SLLHRLSTAYPN-YSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNVVLGMP 180
           S+L RLS  + + YS    S  G++    +VK N    +N Q+ N V +  S+N +L   
Sbjct: 121 SILKRLSMRFTDLYSRS--SLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQMLPGH 180

Query: 181 DILQTPGVSNQRLSFGMTPKTRRLPKPGEMLVSIHGSPLGVYKED-NMEAIH 225
           D  QTPGV+ QRLSFGMTPKT RLPK GEM++S+HGSPLGVYKED NM AI+
Sbjct: 181 DAFQTPGVNGQRLSFGMTPKTLRLPKAGEMMLSVHGSPLGVYKEDHNMGAIN 229

The following BLAST results are available for this feature:

BLAST of HG10016501 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034696.1	2.8e-109	90.60	Translation initiation factor IF-2, putative isoform 1 [Cucumis melo var. makuwa...	[more]
KAG6604007.1	1.1e-108	88.98	hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004143493.2	1.4e-108	93.75	uncharacterized protein LOC101215210 [Cucumis sativus] >KAE8647570.1 hypothetica...	[more]
XP_023543921.1	9.1e-108	88.56	uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]	[more]
XP_038891412.1	9.1e-108	91.30	uncharacterized protein LOC120080833 [Benincasa hispida] >XP_038891413.1 unchara...	[more]

BLAST of HG10016501 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10016501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXV4	1.4e-109	90.60	Translation initiation factor IF-2, putative isoform 1 OS=Cucumis melo var. maku...	[more]
A0A0A0KK81	6.8e-109	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501280 PE=4 SV=1	[more]
A0A1S4DWB9	1.3e-107	90.87	uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=...	[more]
A0A5D3CLG2	1.7e-107	92.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B1M1	1.7e-107	92.86	uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=...	[more]

BLAST of HG10016501 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39630.1	2.9e-51	51.72	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29
None	No IPR available	PANTHER	PTHR37248	TRANSLATION INITIATION FACTOR	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016501.1	HG10016501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity