HG10016500 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016500
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr03: 5484040 .. 5485856 (+)
RNA-Seq Expression	HG10016500
Synteny	HG10016500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTCTTCATCTTCCTCAAATTCCCAACCCTCTCGGCTATGGTTTCCACTCCCTTCGTCTCTAAGGAGAGCCGTTTCGACCCGAGTGGTCTGCATTTCAACTCGACCCAATAGGAAATCTGGGGCTAAGACCGAAAAATCGGAGGCGGAAGAATTGGTTCGCGGTGTAATCAGAAAGTTCAGCGACAAAGAGCCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTATTTGAAGAACTGGGAAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTTCGCTTTTCTTCTTTTCAACTTTGAATTTGTGCCTCTGGGTATTGGATTTTCTAACTTGGATAGATGGGTAATGATAAAAATGCTGATAGGCAGAGATGAATGAATTTAAAATCGTGGATATGAATTTTCAATTGAAATTAATGGAATTTTCACTGTAGTTCAAGCTCAATTTAGGCATAGATGAAGAATGGAGTCTATATTTTTCTGGGTGGAGTTAAACAGGCAAAGACAGGGCAGCTCTATGGAATGTTTTATTGATGTGTTTTCATTTTCAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCGCATCTTCATTCTAAGGATAAAGCAAAGGCTTTAGTTAAAGTCCTTTGGTATTTTGAGAAGATGAAGGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATATATTGTTTAAAGATCTTGATGAGAGTATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATGAAATTAAACCAGATATCATATCCTTTAATTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGAGAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCAAAGGAGAGGCCAACGTTGCCTACTTTCAATTCGATGATCACCAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGCTTTTAGGAAGATGAAGGATATGGGATATGACCCGAGCTATGTGACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATATTTGATGGAATGGTTAATTCTGGGAAGGAGGTAAGAGTCTCAACCCTCAATGCCATGCTTGAAGTTTACTGCATGAATGGTTTGCCCTTAGAAGCCGATTTGCTTTTCGAGAGTGCAAGTAATATGAGGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATATGAAGGAACTTCTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACGGTTGGATCTTCACCAGAGAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGAAGTGTGGAAAAACCAGTATCTTCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGTAGTGTGAAAAACCAGGCTCGAGAATTAGGCTTAGCTTAA

mRNA sequence

ATGCCCCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTCTTCATCTTCCTCAAATTCCCAACCCTCTCGGCTATGGTTTCCACTCCCTTCGTCTCTAAGGAGAGCCGTTTCGACCCGAGTGGTCTGCATTTCAACTCGACCCAATAGGAAATCTGGGGCTAAGACCGAAAAATCGGAGGCGGAAGAATTGGTTCGCGGTGTAATCAGAAAGTTCAGCGACAAAGAGCCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTATTTGAAGAACTGGGAAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCGCATCTTCATTCTAAGGATAAAGCAAAGGCTTTAGTTAAAGTCCTTTGGTATTTTGAGAAGATGAAGGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATATATTGTTTAAAGATCTTGATGAGAGTATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATGAAATTAAACCAGATATCATATCCTTTAATTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGAGAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCAAAGGAGAGGCCAACGTTGCCTACTTTCAATTCGATGATCACCAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGCTTTTAGGAAGATGAAGGATATGGGATATGACCCGAGCTATGTGACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATATTTGATGGAATGGTTAATTCTGGGAAGGAGGTAAGAGTCTCAACCCTCAATGCCATGCTTGAAGTTTACTGCATGAATGGTTTGCCCTTAGAAGCCGATTTGCTTTTCGAGAGTGCAAGTAATATGAGGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATATGAAGGAACTTCTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACGGTTGGATCTTCACCAGAGAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGAAGTGTGGAAAAACCAGTATCTTCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGTAGTGTGAAAAACCAGGCTCGAGAATTAGGCTTAGCTTAA

Coding sequence (CDS)

ATGCCCCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTCTTCATCTTCCTCAAATTCCCAACCCTCTCGGCTATGGTTTCCACTCCCTTCGTCTCTAAGGAGAGCCGTTTCGACCCGAGTGGTCTGCATTTCAACTCGACCCAATAGGAAATCTGGGGCTAAGACCGAAAAATCGGAGGCGGAAGAATTGGTTCGCGGTGTAATCAGAAAGTTCAGCGACAAAGAGCCATTGCTCAAGACACTGGACAAGTACGTCCGTGTTATGAGAACTGAGCATTGTTTTCTTCTATTTGAAGAACTGGGAAAAAGGGATAAATGGCTTCAGTGCCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGCCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCGCATCTTCATTCTAAGGATAAAGCAAAGGCTTTAGTTAAAGTCCTTTGGTATTTTGAGAAGATGAAGGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGGAAAAGTGGATCAAGTTAATATATTGTTTAAAGATCTTGATGAGAGTATTGTTTCAGCTGATATATATACATATAATGGAGTGATGGATGCATATGGGAAAAATGGGATGATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATGAAATTAAACCAGATATCATATCCTTTAATTTGTTGATTGATTCATATGGGAAGAAACAGCTATTTGAGAAGATGGAACAGGTGTTCAAGAGCTTATTACGATCAAAGGAGAGGCCAACGTTGCCTACTTTCAATTCGATGATCACCAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGCTTTTAGGAAGATGAAGGATATGGGATATGACCCGAGCTATGTGACTTGTGAAAGTCTAATCATGATGTATGGTCACTGTGACTGTGTTTCTAAGGCTAGAGAAATATTTGATGGAATGGTTAATTCTGGGAAGGAGGTAAGAGTCTCAACCCTCAATGCCATGCTTGAAGTTTACTGCATGAATGGTTTGCCCTTAGAAGCCGATTTGCTTTTCGAGAGTGCAAGTAATATGAGGGTGTTTCCAGATTCAACAACATACAAGCTTCTGTATAAAGCTTACACCAAAGCTGATATGAAGGAACTTCTGGAGAAGCTCTTGAAGAACATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACGGTTGGATCTTCACCAGAGAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGAAGTGTGGAAAAACCAGTATCTTCAAGAACTAGAACAGGTTCAAGAAACTCAGAAAGTAGTGTGAAAAACCAGGCTCGAGAATTAGGCTTAGCTTAA

Protein sequence

MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTEKSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSERSVEKPVSSRTRTGSRNSESSVKNQARELGLA

Homology

[Close]

BLAST of HG10016500 vs. NCBI nr
Match: XP_023543919.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 937.6 bits (2422), Expect = 4.6e-269
Identity = 476/512 (92.97%), Postives = 492/512 (96.09%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRPNRKSGAKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVEKP+SSR R GSR  ESSVKN A ELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of HG10016500 vs. NCBI nr
Match: KAG7034169.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 936.4 bits (2419), Expect = 1.0e-268
Identity = 476/512 (92.97%), Postives = 491/512 (95.90%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRPNRKS AKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVEKP+SSR R GSR  ESSVKN A ELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of HG10016500 vs. NCBI nr
Match: KAG6604006.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 934.5 bits (2414), Expect = 3.9e-268
Identity = 475/512 (92.77%), Postives = 491/512 (95.90%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRPNRKS AKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIF+GMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+M+VFPDSTTYKL
Sbjct: 361 VSKAREIFNGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVEKP+SSR R GSR  ESSVKN A ELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of HG10016500 vs. NCBI nr
Match: XP_022950765.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita moschata])

HSP 1 Score: 933.7 bits (2412), Expect = 6.7e-268
Identity = 474/512 (92.58%), Postives = 490/512 (95.70%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRPNRKS AKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SE EELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVEKP+SSR R GSR  ESSVKN A ELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of HG10016500 vs. NCBI nr
Match: XP_022978471.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita maxima])

HSP 1 Score: 929.9 bits (2402), Expect = 9.7e-267
Identity = 473/512 (92.38%), Postives = 487/512 (95.12%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRP RKSGAKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEE FRKMK MGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKGMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+MRVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPA T TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVE P+SSR R GSR  ESSVKN   ELGLA
Sbjct: 481 SSVENPISSRNRRGSRKLESSVKNHTPELGLA 512

[Close]

BLAST of HG10016500 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 5.9e-174
Identity = 315/470 (67.02%), Postives = 374/470 (79.57%), Query Frame = 0


Query: 37  RRAVSTRVVCISTRPNRKSGAKTEKSEAEE--LVRGVIRKFSDKEPLLKTLDKYVRVMRT 96
           RR+  TR+ C +    RK  A+ E +E E   LVR ++ + SD+EPL+KTLDKYV+V+R 
Sbjct: 39  RRSTRTRITCGAISSRRKL-AERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRC 98

Query: 97  EHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFS 156
           +HCFLLFEELGK DKWLQCLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFS
Sbjct: 99  DHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 158

Query: 157 EMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRA 216
           EM+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RA
Sbjct: 159 EMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRA 218

Query: 217 FAQAGKVDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPD 276
           FAQ+GKVDQVN LFKDLD S VS D+YT+NGVMDAYGKNGMIKEME +L RM+SNE KPD
Sbjct: 219 FAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 278

Query: 277 IISFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFR 336
           II+FN+LIDSYGKKQ FEKMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE  F+
Sbjct: 279 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 338

Query: 337 KMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNG 396
           KM DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAMLEVYC NG
Sbjct: 339 KMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 398

Query: 397 LPLEADLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFL 456
           L +EAD LF +AS  RV PD++TYK LYKAYTKADMKE ++ L+K M+K GI+PNKRFFL
Sbjct: 399 LYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 458

Query: 457 DALGTVGSSPEKPEPARTRTGSRNSERSVEKPVSSRTRTGSRNSESSVKN 505
           +AL   GS    P        S  S RS + P   + R G++ +E   K+
Sbjct: 459 EALEVFGS--RLPGSGSENRKSTRSSRSRDSP---KGRGGNQLTEFQDKD 502

[Close]

BLAST of HG10016500 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 1.1e-169
Identity = 302/465 (64.95%), Postives = 369/465 (79.35%), Query Frame = 0


Query: 41  STRVVCISTRPNRK-------SGAKTEKSEAEELVRGVIRKFS-DKEPLLKTLDKYVRVM 100
           +TR V ++ R  R+        G     +EA ELVR ++R+ +  KE L+  LD++VRV+
Sbjct: 27  ATRHVALAARSKRRGAGPAAAEGVDEAAAEAAELVRSLLRRTAGGKERLVPVLDRHVRVV 86

Query: 101 RTEHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWL 160
           RTEHCFLLFEELG+RD WLQCL+VFRWMQKQRWY+ADNG+YSKLIS+MG+KGQIRMAMWL
Sbjct: 87  RTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWL 146

Query: 161 FSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILT 220
           FS+MRNSGC+PDTSVYN+LI AHLHS+DK KAL K L YFEKMK +ERC+P IVTYNIL 
Sbjct: 147 FSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILL 206

Query: 221 RAFAQAGKVDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARMKSNEIK 280
           RAFAQAG   QV++LFKDLDES+VS D+YTYNGV+DAYGKNGMIKEME +L RMKS + +
Sbjct: 207 RAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCR 266

Query: 281 PDIISFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEA 340
           PD+I+FN+LIDSYG+KQ F+KMEQVFKSLLRSKERPT PTFNSMITNYG+ARLREKAE  
Sbjct: 267 PDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESV 326

Query: 341 FRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCM 400
             KM+++G+ P+YVT E LI+MY HCDCVSKAR++FD +V S  +V +S+LN+MLE YCM
Sbjct: 327 VEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCM 386

Query: 401 NGLPLEADLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRF 460
           NGL  EAD L ++A    V P+ +TYKLLYKAYTKA+ K L++KLLK M+K GI+PNK+F
Sbjct: 387 NGLHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKF 446

Query: 461 FLDALGTVGSSPEKPEPARTRTGSRN-SERSVEKPVSSRTRTGSR 497
           FLDAL   G+S  KP   RT  G  + S+ S +    S T T  +
Sbjct: 447 FLDALEAFGTSDRKP---RTSPGINSASKPSTDSAGDSETATSDK 488

[Close]

BLAST of HG10016500 vs. ExPASy Swiss-Prot
Match: A3ABE1 (Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2)

HSP 1 Score: 595.9 bits (1535), Expect = 4.3e-169
Identity = 296/438 (67.58%), Postives = 360/438 (82.19%), Query Frame = 0


Query: 60  EKSEAEELVRGVIRKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFR 119
           E +EA +LVR  +R+ S  KE L+  LD++V+V+RTEHCFLLFEELG+RD WLQCLEVFR
Sbjct: 50  EAAEAADLVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEVFR 109

Query: 120 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 179
           WMQKQRWY+ADNG+YSKLIS+MG+KGQIRMAMWLFS+MRNSGCRPDTSVYN+LI  HLHS
Sbjct: 110 WMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHS 169

Query: 180 KDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSA 239
           +DK+KAL K L YFEKMK ++RC+PNIVTYNIL RAFAQAG   Q++ILFKDLDES VS 
Sbjct: 170 RDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSP 229

Query: 240 DIYTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVF 299
           DIYTYNGVMDAYGKNGMI EME +L RMKSN+ +PD+I+FN+LIDSYG+KQ F+KMEQVF
Sbjct: 230 DIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVF 289

Query: 300 KSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHC 359
           KSLLRSKE+PT PTFNSMITNYGKARLREKAE    KM +MG+ P+YVT E LIMMY +C
Sbjct: 290 KSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYC 349

Query: 360 DCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTY 419
           DCVS+AR+IFD +V+S   V +S++NAML+ YCMNGLP+EAD L +S       P ++TY
Sbjct: 350 DCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTY 409

Query: 420 KLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRN 479
           KLLYKAYTKA+ K+L++KLLK M+  GI+PNK+FFLDAL   G++ +KP    ++  +  
Sbjct: 410 KLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNTDKKPRTVPSKNSA-- 469

Query: 480 SERSVEKPVSSRTRTGSR 497
           S+  VE   +S T T S+
Sbjct: 470 SKPDVESANNSGTDTSSK 485

[Close]

BLAST of HG10016500 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.7e-38
Identity = 106/380 (27.89%), Postives = 171/380 (45.00%), Query Frame = 0


Query: 102 EELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 161
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 66  DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125

Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKV 221
           +P   VY +LI+ +     K++ L K     E MK +  CKP++ T+ +L     + G+ 
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185

Query: 222 DQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLA----------------- 281
           D V  +  ++    V     TYN ++D YGK GM +EME +LA                 
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245

Query: 282 -------------------RMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKSLLRSK 341
                              R +   ++PDI +FN+LI S+GK  +++KM  V   + +  
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305

Query: 342 ERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 401
              T  T+N +I  +GKA   EK ++ FRKMK  G  P+ +T  SL+  Y     V K  
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365

Query: 402 EIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKLLYKAY 446
            +   +VNS   +     N ++  Y   G       L+      +  PD  T+  + K Y
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 425

[Close]

BLAST of HG10016500 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.3e-37
Identity = 97/354 (27.40%), Postives = 171/354 (48.31%), Query Frame = 0


Query: 103 ELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 162
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P++ TY+ L +A   A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARM-KSNEIKPDIISFN 282
            D V+ L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276

Query: 283 LLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDM 342
           +++  +G     + ME  ++        P   TFN +I +YGK R+ +K       M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336

Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEA 402
            +  +  T  ++I  +            FD M + G +    T   ++  Y   GL  + 
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396

Query: 403 DLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFF 454
               + A+   +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]

BLAST of HG10016500 vs. ExPASy TrEMBL
Match: A0A6J1GGN3 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453772 PE=3 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.2e-268
Identity = 474/512 (92.58%), Postives = 490/512 (95.70%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRPNRKS AKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SE EELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVEKP+SSR R GSR  ESSVKN A ELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of HG10016500 vs. ExPASy TrEMBL
Match: A0A6J1IMR8 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478441 PE=3 SV=1)

HSP 1 Score: 929.9 bits (2402), Expect = 4.7e-267
Identity = 473/512 (92.38%), Postives = 487/512 (95.12%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSP+FTP SSSS N Q S+ W PLP SLRRAVSTRVVCISTRP RKSGAKT+
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQAGKVDQVN LFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNGMIKEME MLARMKSNEIKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEE FRKMK MGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKGMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAML+VYCMNGLP+EADLLFESAS+MRVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPA T TGSR+SE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480

Query: 481 RSVEKPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVE P+SSR R GSR  ESSVKN   ELGLA
Sbjct: 481 SSVENPISSRNRRGSRKLESSVKNHTPELGLA 512

[Close]

BLAST of HG10016500 vs. ExPASy TrEMBL
Match: A0A5A7T266 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00650 PE=3 SV=1)

HSP 1 Score: 917.5 bits (2370), Expect = 2.4e-263
Identity = 468/531 (88.14%), Postives = 489/531 (92.09%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLS S QFSP FT S SSS  SQ SRLWFP+PSSL++  STRVVC+STRP+RKSG KT+
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNG IKEMELMLARMKSN+IKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAML+VYC+NGLP EAD+LFESA NM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART+TGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 RSVE-------------------KPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVE                   KP+SSRTRTGSRN ES V+N A ELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of HG10016500 vs. ExPASy TrEMBL
Match: A0A0A0KGV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 3.1e-263
Identity = 474/531 (89.27%), Postives = 490/531 (92.28%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLSFSLQFSPTFTPS SS   SQ SRLW PLPSS+++AVSTRVVCISTRP+RK G KT+
Sbjct: 1   MPLSFSLQFSPTFTPSYSS---SQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNG IKEMELMLARMKSN+IKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAML+VYC+NGLPLEADLLFESA NMRVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPARTRTGSRNS+
Sbjct: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480

Query: 481 RSVE-------------------KPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVE                   KP SSRTRTGSRNSES V+N A ELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]

BLAST of HG10016500 vs. ExPASy TrEMBL
Match: A0A5D3CMK0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002480 PE=3 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.7e-261
Identity = 466/531 (87.76%), Postives = 487/531 (91.71%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSSSSSSNSQPSRLWFPLPSSLRRAVSTRVVCISTRPNRKSGAKTE 60
           MPLS S QFSP FT S SSS  SQ SRLW P+PSSL++  STRVVC+STR +RKSG KT+
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  KSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
           +SEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNILFKDLDESIVSADI 240
           KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKS 300
           YTYNGVMDAYGKNG IKEMELMLARMKSN+IKPDIISFNLLIDSYGKKQLF+KMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEE FRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAML+VYC+NGLP EAD+LFESA NM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTRTGSRNSE 480
           LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART+TGSRNSE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 RSVE-------------------KPVSSRTRTGSRNSESSVKNQARELGLA 513
            SVE                   KP+SSRTRTGSRN ES V+N A ELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of HG10016500 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 612.1 bits (1577), Expect = 4.2e-175
Identity = 315/470 (67.02%), Postives = 374/470 (79.57%), Query Frame = 0


Query: 37  RRAVSTRVVCISTRPNRKSGAKTEKSEAEE--LVRGVIRKFSDKEPLLKTLDKYVRVMRT 96
           RR+  TR+ C +    RK  A+ E +E E   LVR ++ + SD+EPL+KTLDKYV+V+R 
Sbjct: 39  RRSTRTRITCGAISSRRKL-AERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRC 98

Query: 97  EHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFS 156
           +HCFLLFEELGK DKWLQCLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFS
Sbjct: 99  DHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 158

Query: 157 EMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRA 216
           EM+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RA
Sbjct: 159 EMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRA 218

Query: 217 FAQAGKVDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPD 276
           FAQ+GKVDQVN LFKDLD S VS D+YT+NGVMDAYGKNGMIKEME +L RM+SNE KPD
Sbjct: 219 FAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 278

Query: 277 IISFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFR 336
           II+FN+LIDSYGKKQ FEKMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE  F+
Sbjct: 279 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 338

Query: 337 KMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNG 396
           KM DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAMLEVYC NG
Sbjct: 339 KMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 398

Query: 397 LPLEADLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFL 456
           L +EAD LF +AS  RV PD++TYK LYKAYTKADMKE ++ L+K M+K GI+PNKRFFL
Sbjct: 399 LYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 458

Query: 457 DALGTVGSSPEKPEPARTRTGSRNSERSVEKPVSSRTRTGSRNSESSVKN 505
           +AL   GS    P        S  S RS + P   + R G++ +E   K+
Sbjct: 459 EALEVFGS--RLPGSGSENRKSTRSSRSRDSP---KGRGGNQLTEFQDKD 502

[Close]

BLAST of HG10016500 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 612.1 bits (1577), Expect = 4.2e-175
Identity = 315/470 (67.02%), Postives = 374/470 (79.57%), Query Frame = 0


Query: 37  RRAVSTRVVCISTRPNRKSGAKTEKSEAEE--LVRGVIRKFSDKEPLLKTLDKYVRVMRT 96
           RR+  TR+ C +    RK  A+ E +E E   LVR ++ + SD+EPL+KTLDKYV+V+R 
Sbjct: 39  RRSTRTRITCGAISSRRKL-AERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRC 98

Query: 97  EHCFLLFEELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFS 156
           +HCFLLFEELGK DKWLQCLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFS
Sbjct: 99  DHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 158

Query: 157 EMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRA 216
           EM+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RA
Sbjct: 159 EMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRA 218

Query: 217 FAQAGKVDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARMKSNEIKPD 276
           FAQ+GKVDQVN LFKDLD S VS D+YT+NGVMDAYGKNGMIKEME +L RM+SNE KPD
Sbjct: 219 FAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 278

Query: 277 IISFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFR 336
           II+FN+LIDSYGKKQ FEKMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE  F+
Sbjct: 279 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 338

Query: 337 KMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNG 396
           KM DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAMLEVYC NG
Sbjct: 339 KMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 398

Query: 397 LPLEADLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFL 456
           L +EAD LF +AS  RV PD++TYK LYKAYTKADMKE ++ L+K M+K GI+PNKRFFL
Sbjct: 399 LYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFL 458

Query: 457 DALGTVGSSPEKPEPARTRTGSRNSERSVEKPVSSRTRTGSRNSESSVKN 505
           +AL   GS    P        S  S RS + P   + R G++ +E   K+
Sbjct: 459 EALEVFGS--RLPGSGSENRKSTRSSRSRDSP---KGRGGNQLTEFQDKD 502

[Close]

BLAST of HG10016500 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 4.3e-39
Identity = 106/381 (27.82%), Postives = 171/381 (44.88%), Query Frame = 0


Query: 102 EELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 161
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 116 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 175

Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKV 221
           +P   VY +LI+ +     K++ L K     E MK +  CKP++ T+ +L     + G+ 
Sbjct: 176 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 235

Query: 222 DQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLA----------------- 281
           D V  +  ++    V     TYN ++D YGK GM +EME +LA                 
Sbjct: 236 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 295

Query: 282 -------------------RMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKSLLRSK 341
                              R +   ++PDI +FN+LI S+GK  +++KM  V   + +  
Sbjct: 296 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 355

Query: 342 ERPTLPTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 401
              T  T+N +I  +GKA   EK ++ FRKMK  G  P+ +T  SL+  Y     V K  
Sbjct: 356 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 415

Query: 402 EIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKLLYKAY 447
            +   +VNS   +     N ++  Y   G       L+      +  PD  T+  + K Y
Sbjct: 416 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 475

[Close]

BLAST of HG10016500 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-38
Identity = 97/354 (27.40%), Postives = 171/354 (48.31%), Query Frame = 0


Query: 103 ELGKRDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 162
           +L  + +WLQ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGK 222
           P   +Y AL+ A+  S   D A +++      +KMK   +C+P++ TY+ L +A   A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216

Query: 223 VDQVNILFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMELMLARM-KSNEIKPDIISFN 282
            D V+ L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276

Query: 283 LLIDSYGKKQLFEKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEAFRKMKDM 342
           +++  +G     + ME  ++        P   TFN +I +YGK R+ +K       M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336

Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLEVYCMNGLPLEA 402
            +  +  T  ++I  +            FD M + G +    T   ++  Y   GL  + 
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396

Query: 403 DLLFESASNMRVFPDSTTYKLLYKAYTKADMKELLEKLLKNMDKAGIIPNKRFF 454
               + A+   +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]

BLAST of HG10016500 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 4.8e-38
Identity = 111/386 (28.76%), Postives = 183/386 (47.41%), Query Frame = 0


Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 168
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAGKVDQVNI 228
            AL++A+  S   D A  L+      E+MK    C+P++ TY+IL ++F Q    D+V  
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 248

Query: 229 LFKDLDESIVSADIYTYNGVMDAYGK---------------------------------- 288
           L  D+    +  +  TYN ++DAYGK                                  
Sbjct: 249 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 308

Query: 289 --NGMIKEMELMLARMKSNEIKPDIISFNLLIDSYGKKQLFEKMEQVFKSLLRSKERPTL 348
             NG I+ ME    + +S+ I+P+I +FN+L+DSYGK   ++KM  V + + +     T+
Sbjct: 309 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 368

Query: 349 PTFNSMITNYGKARLREKAEEAFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDG 408
            T+N +I  +G+A   ++ E  FR M+     PS VT  SL+  YG      K   +   
Sbjct: 369 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 428

Query: 409 MVNSGKEVRVSTLNAMLEVYCMNGLPLEADLLFESASNMRVFPDSTTYKLLYKAYTKADM 454
           + NS   + +   N +++ Y       E   + E        PD  TY+ + KAY  + M
Sbjct: 429 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 488

The following BLAST results are available for this feature:

BLAST of HG10016500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543919.1	4.6e-269	92.97	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]
KAG7034169.1	1.0e-268	92.97	Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper...	[more]
KAG6604006.1	3.9e-268	92.77	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022950765.1	6.7e-268	92.58	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]
XP_022978471.1	9.7e-267	92.38	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]

BLAST of HG10016500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SV96	5.9e-174	67.02	Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop...	[more]
A7LN87	1.1e-169	64.95	Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4...	[more]
A3ABE1	4.3e-169	67.58	Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza...	[more]
Q9SCP4	2.7e-38	27.89	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]
Q9SQU6	2.3e-37	27.40	Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop...	[more]

BLAST of HG10016500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGN3	3.2e-268	92.58	pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit...	[more]
A0A6J1IMR8	4.7e-267	92.38	pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit...	[more]
A0A5A7T266	2.4e-263	88.14	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KGV8	3.1e-263	89.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1	[more]
A0A5D3CMK0	1.7e-261	87.76	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of HG10016500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39620.1	4.2e-175	67.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.2	4.2e-175	67.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53170.1	4.3e-39	27.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G06430.1	1.6e-38	27.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48730.1	4.8e-38	28.76	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 152..215 e-value: 3.0E-9 score: 36.8 coord: 227..287 e-value: 4.4E-9 score: 36.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 346..375 e-value: 0.0098 score: 16.1 coord: 382..404 e-value: 0.013 score: 15.7 coord: 312..340 e-value: 2.2E-5 score: 24.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 132..165 e-value: 2.7E-5 score: 22.1 coord: 241..275 e-value: 5.8E-9 score: 33.6 coord: 276..309 e-value: 1.4E-5 score: 22.9 coord: 312..344 e-value: 1.8E-6 score: 25.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 239..273 score: 11.695765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 204..238 score: 8.878711
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 129..163 score: 11.443655
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 274..308 score: 10.073492
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 309..343 score: 11.016164
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 414..448 score: 9.218511
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 305..505 e-value: 5.1E-29 score: 103.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 58..233 e-value: 1.0E-36 score: 128.3 coord: 234..304 e-value: 1.3E-15 score: 59.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..505
None	No IPR available	PANTHER	PTHR47874:SF3	BNAA01G05620D PROTEIN	coord: 37..477
IPR044179	Pentatricopeptide repeat-containing protein PPR5-like	PANTHER	PTHR47874	EXPRESSED PROTEIN	coord: 37..477

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016500.1	HG10016500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding