HG10016451 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016451
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr03: 5146797 .. 5148802 (+)
RNA-Seq Expression	HG10016451
Synteny	HG10016451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAGGCACTTCAAGTTCATGGACTGGTTATCAAACTGGGATTTGGGTCGGATGTTTTTGCATTGAATGCTCTGCTTCATGTCTACGCTTTGTGTGGTGACATTCAGTATGCACGCCAACTGTTTGACAATATTCCTGAAAGAGATGTTGTTTCTTGGAACATAATGATTGATGGGTATATCAAATCTGGGGATGTGAAAACGGCTTATGGGGTTTTCTTGGACATGCCATTGAAGAATGTGGTCTCGTGGACGTCGTTGATTTCGGGGCTAGTTGAGGCAGGACAGAGCGTAGAAGCTTTGAGTCTTTGCTATGAGATGCAGAATGCAGGATTTGAACTTGATGGTGTTGCTATTGCGAGTTTGCTTACTGCTTGTGCAAATCTTGGAGCGTTGGATCAAGGAAGATGGCTCCATTTCTATGTTCTCAACAATGGAGTCCACGTCGATCGAGTAATTGGCTGTGCTCTGGTGAATATGTACTTAAAATGTGGGGATATGGAAGAAGCCTTGAGAGTGTTTGGGAAACTGAGGGGTGATCAGAAAGATGTGTATGTTTGGACGGCTATGATTGATGGCTTTGCCATTCATGGGCGTGGAGTGGAAGCTCTGGAATGGTTTAACCGAATGCAGAGAGAAGGAATAAGACCAAATTCCATCACTTTCACTACAGTTTTAAGGGCCTGTGGCTATGCAGGACTGGTTGAAGAAGGAAAAGTGTTATTCGAGAGCATGAAAAGTCTCTATAACTTGAGCCCATCTATTGAGCATTATGGGTGTATGGTTGATCTTTTGGGTCGAGCTGGGCTGCTGGAGGAAGCGAAGGAGTTGATCAAGAAGATGCCCATGAAACCTAATGCTGTAATATGGGGAGCTTTGCTAAAGGTAGGGGAAAGTTTTATGTGCTTAGTTTTTTAAATCATGGGCTAAATATATGTTTAGGGATGATATTTAGTGAGCTATTAGGAATGTACACATAGGAGAGAACAAGAATCTTCACCTAGAATAGAAAAGGTTGGATTTCTGTCAACTTCATAAAAGATTATTCTTAGAAATTTTGTAGAGAAACTAAAATCCTTCCATCAATTCAGTGATCTTATTCTCTTAAATTTGAGTAAACTCACTGAGTGATGAGTATCATGCTAGCTACATAAGCTTACCATAACCCAAATTTAACAACCACAAACTGAAAGAGCATAGCTTAAAAATATTAAAATGTAAGTAACTAAATTAAGACTTCTTAACTGCACTAAATTATGTTTTTAATTAAAGATAAAAGTTGAGAATCAACATAAGCTTACCACTCCTTCCTCCCGTTCAGGCCTGTTGGATTCATAGAGATTTTCTGGTGGGTAGCCAAATCGGAGCCCACCTGATGGAAGTTGATTCAGATCATAGCGGGCGGTACATTCAGTTGGCTACCATTTTAGCTGCAGAAGGTAAGTGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATCTGAGAGTCCCAATTCCCCCAGGAAAGAGTTCAATAACTTTGAATGGCATTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACATATGGAGCAGATTCATTTGAAACTGAAAGAGGTTGCAGAGAGGCTACAACAAGACGAAGGGTACTTCTAAATCACGATTAAATCCAAAAACTTAAGCTGATAAGTTACCGTATATATATCTAATGTTTTGTTCATACTCATCTTTTAACAGTTATGAACCTGCTACTAAAGATTTATTACTTGACCTTGAGAATGAGGAGAAAGAGGCTGCAATGGCTCAACATAGTGAGAAGTTGGCCATTGCTTTTGGATTGATCAATACGAAACCAGGAGCGACGATTCGAGTTGTTAAGAATCTTAGGGTCTGCGGAGATTGTCACGCCGTTGCGAAGCTCGTATCTCGAATCTATTGTAGAGAGATTATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAATTGTTCTTGCAAAGATTACTGGTAG

mRNA sequence

ATGGGTGAGGCACTTCAAGTTCATGGACTGGTTATCAAACTGGGATTTGGGTCGGATGCCTGTTGGATTCATAGAGATTTTCTGGTGGGTAGCCAAATCGGAGCCCACCTGATGGAAGTTGATTCAGATCATAGCGGGCGGTACATTCAGTTGGCTACCATTTTAGCTGCAGAAGGTAAGTGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATCTGAGAGTCCCAATTCCCCCAGGAAAGAGTTCAATAACTTTGAATGGCATTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACATATGGAGCAGATTCATTTGAAACTGAAAGAGGTTGCAGAGAGGCTACAACAAGACGAAGGTTATGAACCTGCTACTAAAGATTTATTACTTGACCTTGAGAATGAGGAGAAAGAGGCTGCAATGGCTCAACATAGTGAGAAGTTGGCCATTGCTTTTGGATTGATCAATACGAAACCAGGAGCGACGATTCGAGTTGTTAAGAATCTTAGGGTCTGCGGAGATTGTCACGCCGTTGCGAAGCTCGTATCTCGAATCTATTGTAGAGAGATTATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAATTGTTCTTGCAAAGATTACTGGTAG

Coding sequence (CDS)

ATGGGTGAGGCACTTCAAGTTCATGGACTGGTTATCAAACTGGGATTTGGGTCGGATGCCTGTTGGATTCATAGAGATTTTCTGGTGGGTAGCCAAATCGGAGCCCACCTGATGGAAGTTGATTCAGATCATAGCGGGCGGTACATTCAGTTGGCTACCATTTTAGCTGCAGAAGGTAAGTGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATCTGAGAGTCCCAATTCCCCCAGGAAAGAGTTCAATAACTTTGAATGGCATTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACATATGGAGCAGATTCATTTGAAACTGAAAGAGGTTGCAGAGAGGCTACAACAAGACGAAGGTTATGAACCTGCTACTAAAGATTTATTACTTGACCTTGAGAATGAGGAGAAAGAGGCTGCAATGGCTCAACATAGTGAGAAGTTGGCCATTGCTTTTGGATTGATCAATACGAAACCAGGAGCGACGATTCGAGTTGTTAAGAATCTTAGGGTCTGCGGAGATTGTCACGCCGTTGCGAAGCTCGTATCTCGAATCTATTGTAGAGAGATTATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAATTGTTCTTGCAAAGATTACTGGTAG

Protein sequence

MGEALQVHGLVIKLGFGSDACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Homology

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BLAST of HG10016451 vs. NCBI nr
Match: XP_008440725.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Cucumis melo] >KAA0036221.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12617.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 377.9 bits (969), Expect = 6.0e-101
Identity = 180/196 (91.84%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATILAA+GKWKEAAEVRLKMKNL VPI 
Sbjct: 422 ACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATILAAQGKWKEAAEVRLKMKNLGVPIS 481

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNGIVHEFLAGHQDHP MEQIHLKLK++AERL+QDEGYEPATKDLLLDLENEE
Sbjct: 482 PGKSSITLNGIVHEFLAGHQDHPQMEQIHLKLKQIAERLRQDEGYEPATKDLLLDLENEE 541

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG TIRVVKNLR+C DCH VAKLVS+IYCREIIMRDRV
Sbjct: 542 KETAIAQHSEKLAIAFGLINTKPGTTIRVVKNLRICRDCHTVAKLVSQIYCREIIMRDRV 601

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG+CSCKDYW
Sbjct: 602 RFHHFRDGSCSCKDYW 617

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BLAST of HG10016451 vs. NCBI nr
Match: XP_004143583.2 (pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus] >KGN48837.1 hypothetical protein Csa_002803 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 175/196 (89.29%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           ACWIHRDFL+GSQ+GAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMK+L VPI 
Sbjct: 422 ACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPIS 481

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSS+TLNGIVHEFLAGHQDHP MEQI LKLK++AERL+QDEGYEPATKDLLLDLENEE
Sbjct: 482 PGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLENEE 541

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE AMAQHSEKLAIAFGLINTKPG TIRV+KNLR+C DCH VAKLVS+IY REIIMRDRV
Sbjct: 542 KETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRV 601

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG+CSCKDYW
Sbjct: 602 RFHHFRDGSCSCKDYW 617

[Close]

BLAST of HG10016451 vs. NCBI nr
Match: XP_038882528.1 (pentatricopeptide repeat-containing protein At5g66520 [Benincasa hispida])

HSP 1 Score: 366.7 bits (940), Expect = 1.4e-97
Identity = 173/196 (88.27%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATI AAEGKWKEAAEVRLKMKNL V IP
Sbjct: 426 ACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATIFAAEGKWKEAAEVRLKMKNLGVSIP 485

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSIT+NG+VHEFLAG QDHP ME+IHLKLK++AERL++DEGYEP+TKDLLLDLENEE
Sbjct: 486 PGKSSITVNGVVHEFLAGQQDHPQMEKIHLKLKQIAERLRRDEGYEPSTKDLLLDLENEE 545

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE AMAQHSEKLAIAFGLINTKPG TIRV+KNLRVC DCH VAKL+S+IYCR IIMRDRV
Sbjct: 546 KETAMAQHSEKLAIAFGLINTKPGMTIRVIKNLRVCEDCHVVAKLISQIYCRGIIMRDRV 605

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFR+GNCSCKDYW
Sbjct: 606 RFHHFRNGNCSCKDYW 621

[Close]

BLAST of HG10016451 vs. NCBI nr
Match: XP_022978438.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP
Sbjct: 426 ACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 485

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNG+VHEFLAGHQDHP MEQI  KL +V ERL+Q EGYEPATKDLLLDLENE 
Sbjct: 486 PGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLDLENEA 545

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+SRIY REIIMRDRV
Sbjct: 546 KETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISRIYRREIIMRDRV 605

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFR G+CSCKDYW
Sbjct: 606 RFHHFRGGSCSCKDYW 621

[Close]

BLAST of HG10016451 vs. NCBI nr
Match: XP_023543056.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.8 bits (909), Expect = 5.4e-94
Identity = 172/196 (87.76%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLR+PIP
Sbjct: 426 ACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRLPIP 485

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNG+VH+FLAGHQDHP MEQI  KL +V ERL+Q EGYEPATKDLLLDLENE 
Sbjct: 486 PGKSSITLNGVVHQFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLDLENEA 545

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+SRIY REIIMRDRV
Sbjct: 546 KETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISRIYRREIIMRDRV 605

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFR GNCSC DYW
Sbjct: 606 RFHHFRGGNCSCNDYW 621

[Close]

BLAST of HG10016451 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-55
Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IH++  +G +IG  L+ +D  H GRY+  A I A + KW +AAE R  MK   V   
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDL-ENE 139
           PG S+I+L G  HEFLAG + HP +E+I  K + +  +L+++ GY P  +++LLDL +++
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEEN-GYVPELEEMLLDLVDDD 544

Query: 140 EKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDR 199
           E+EA + QHSEKLAI +GLI TKPG  IR++KNLRVC DCH V KL+S+IY R+I+MRDR
Sbjct: 545 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 604

Query: 200 VRFHHFRDGNCSCKDYW 216
            RFHHFRDG CSC DYW
Sbjct: 605 TRFHHFRDGKCSCGDYW 620

[Close]

BLAST of HG10016451 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.4e-49
Identity = 97/196 (49.49%), Postives = 129/196 (65.82%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IH++  +     A L E+DS + G Y+ L+ I A  G+WK+   VR+ MKN  +  P
Sbjct: 465 ACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG S + LNG VH FL G ++HP  E+I+  L E+  +L  + GY   T  +  D++ EE
Sbjct: 525 PGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAGYVSNTSSVCHDVDEEE 584

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE  +  HSEKLAIAFG++NT PG+T+ VVKNLRVC DCH V KL+S+I  RE ++RD  
Sbjct: 585 KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAK 644

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHF+DG CSC DYW
Sbjct: 645 RFHHFKDGGCSCGDYW 659

[Close]

BLAST of HG10016451 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 92/196 (46.94%), Postives = 132/196 (67.35%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC +H +  +G     +L++++ ++ G Y+ L+ I A+ G+W E A+ R  + +  +   
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG SSI ++ +VHEF+ G + HP   +I+  L+E+ E L +  G+ P T ++L ++E E 
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM-EVLLEKAGFVPDTSEVLQEMEEEW 666

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+  HSEKLAIAFGLI+TKPG  + +VKNLRVC +CH   KL+S+IY REII RDR 
Sbjct: 667 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 726

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG CSC DYW
Sbjct: 727 RFHHFRDGVCSCNDYW 741

[Close]

BLAST of HG10016451 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 95/197 (48.22%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IH +  +       L+E++  + G ++ L+ I A  GKW+  +E+R  M+   +   
Sbjct: 543 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG SSI ++G++HEFL+G   HP  E+++ KL EV E+L+ + GYEP    +L  +E EE
Sbjct: 603 PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN-GYEPEISQVLQIIEEEE 662

Query: 140 -KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDR 199
            KE ++  HSEKLAI +GLI+T+    IRV+KNLRVCGDCH+VAKL+S++Y REII+RDR
Sbjct: 663 MKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDR 722

Query: 200 VRFHHFRDGNCSCKDYW 216
            RFHHFR+G CSC D+W
Sbjct: 723 YRFHHFRNGQCSCNDFW 738

[Close]

BLAST of HG10016451 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 89/196 (45.41%), Postives = 134/196 (68.37%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC +  +  +G ++   LM++    SG Y+ L+ + A++G W E +E+RL+MK   +   
Sbjct: 452 ACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG S I ++G++HEF+     HP  ++I+  L E++++L+   GY P T  +LL+LE E+
Sbjct: 512 PGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL-AGYRPITTQVLLNLEEED 571

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE  +  HSEK+A AFGLI+T PG  IR+VKNLR+C DCH+  KL+S++Y R+I +RDR 
Sbjct: 572 KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRK 631

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHF+DG+CSC DYW
Sbjct: 632 RFHHFQDGSCSCMDYW 646

[Close]

BLAST of HG10016451 vs. ExPASy TrEMBL
Match: A0A5D3CKZ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002030 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 180/196 (91.84%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATILAA+GKWKEAAEVRLKMKNL VPI 
Sbjct: 422 ACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATILAAQGKWKEAAEVRLKMKNLGVPIS 481

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNGIVHEFLAGHQDHP MEQIHLKLK++AERL+QDEGYEPATKDLLLDLENEE
Sbjct: 482 PGKSSITLNGIVHEFLAGHQDHPQMEQIHLKLKQIAERLRQDEGYEPATKDLLLDLENEE 541

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG TIRVVKNLR+C DCH VAKLVS+IYCREIIMRDRV
Sbjct: 542 KETAIAQHSEKLAIAFGLINTKPGTTIRVVKNLRICRDCHTVAKLVSQIYCREIIMRDRV 601

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG+CSCKDYW
Sbjct: 602 RFHHFRDGSCSCKDYW 617

[Close]

BLAST of HG10016451 vs. ExPASy TrEMBL
Match: A0A1S3B1S8 (pentatricopeptide repeat-containing protein At5g66520 OS=Cucumis melo OX=3656 GN=LOC103485057 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.9e-101
Identity = 180/196 (91.84%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATILAA+GKWKEAAEVRLKMKNL VPI 
Sbjct: 422 ACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATILAAQGKWKEAAEVRLKMKNLGVPIS 481

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNGIVHEFLAGHQDHP MEQIHLKLK++AERL+QDEGYEPATKDLLLDLENEE
Sbjct: 482 PGKSSITLNGIVHEFLAGHQDHPQMEQIHLKLKQIAERLRQDEGYEPATKDLLLDLENEE 541

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG TIRVVKNLR+C DCH VAKLVS+IYCREIIMRDRV
Sbjct: 542 KETAIAQHSEKLAIAFGLINTKPGTTIRVVKNLRICRDCHTVAKLVSQIYCREIIMRDRV 601

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG+CSCKDYW
Sbjct: 602 RFHHFRDGSCSCKDYW 617

[Close]

BLAST of HG10016451 vs. ExPASy TrEMBL
Match: A0A0A0KKE0 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502750 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 175/196 (89.29%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           ACWIHRDFL+GSQ+GAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMK+L VPI 
Sbjct: 422 ACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPIS 481

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSS+TLNGIVHEFLAGHQDHP MEQI LKLK++AERL+QDEGYEPATKDLLLDLENEE
Sbjct: 482 PGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLENEE 541

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE AMAQHSEKLAIAFGLINTKPG TIRV+KNLR+C DCH VAKLVS+IY REIIMRDRV
Sbjct: 542 KETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRV 601

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG+CSCKDYW
Sbjct: 602 RFHHFRDGSCSCKDYW 617

[Close]

BLAST of HG10016451 vs. ExPASy TrEMBL
Match: A0A6J1IT43 (pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita maxima OX=3661 GN=LOC111478422 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.3e-95
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP
Sbjct: 426 ACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 485

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNG+VHEFLAGHQDHP MEQI  KL +V ERL+Q EGYEPATKDLLLDLENE 
Sbjct: 486 PGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLDLENEA 545

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+SRIY REIIMRDRV
Sbjct: 546 KETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISRIYRREIIMRDRV 605

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFR G+CSCKDYW
Sbjct: 606 RFHHFRGGSCSCKDYW 621

[Close]

BLAST of HG10016451 vs. ExPASy TrEMBL
Match: A0A6J1GDX2 (pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita moschata OX=3662 GN=LOC111453066 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 171/196 (87.24%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLR+PIP
Sbjct: 426 ACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRLPIP 485

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PGKSSITLNG+VHEFLAGHQDHP MEQI  KL +V ERL+Q EGYEPATKDLLLDLE+E 
Sbjct: 486 PGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLDLESEA 545

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+S+IY REIIMRDRV
Sbjct: 546 KETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISQIYRREIIMRDRV 605

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFR GNCSC DYW
Sbjct: 606 RFHHFRGGNCSCNDYW 621

[Close]

BLAST of HG10016451 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-56
Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IH++  +G +IG  L+ +D  H GRY+  A I A + KW +AAE R  MK   V   
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDL-ENE 139
           PG S+I+L G  HEFLAG + HP +E+I  K + +  +L+++ GY P  +++LLDL +++
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEEN-GYVPELEEMLLDLVDDD 544

Query: 140 EKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDR 199
           E+EA + QHSEKLAI +GLI TKPG  IR++KNLRVC DCH V KL+S+IY R+I+MRDR
Sbjct: 545 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 604

Query: 200 VRFHHFRDGNCSCKDYW 216
            RFHHFRDG CSC DYW
Sbjct: 605 TRFHHFRDGKCSCGDYW 620

[Close]

BLAST of HG10016451 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 194.9 bits (494), Expect = 6.7e-50
Identity = 97/196 (49.49%), Postives = 129/196 (65.82%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IH++  +     A L E+DS + G Y+ L+ I A  G+WK+   VR+ MKN  +  P
Sbjct: 465 ACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG S + LNG VH FL G ++HP  E+I+  L E+  +L  + GY   T  +  D++ EE
Sbjct: 525 PGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL-LEAGYVSNTSSVCHDVDEEE 584

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE  +  HSEKLAIAFG++NT PG+T+ VVKNLRVC DCH V KL+S+I  RE ++RD  
Sbjct: 585 KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAK 644

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHF+DG CSC DYW
Sbjct: 645 RFHHFKDGGCSCGDYW 659

[Close]

BLAST of HG10016451 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 8.7e-50
Identity = 92/196 (46.94%), Postives = 132/196 (67.35%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC +H +  +G     +L++++ ++ G Y+ L+ I A+ G+W E A+ R  + +  +   
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG SSI ++ +VHEF+ G + HP   +I+  L+E+ E L +  G+ P T ++L ++E E 
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM-EVLLEKAGFVPDTSEVLQEMEEEW 666

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE A+  HSEKLAIAFGLI+TKPG  + +VKNLRVC +CH   KL+S+IY REII RDR 
Sbjct: 667 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 726

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHFRDG CSC DYW
Sbjct: 727 RFHHFRDGVCSCNDYW 741

[Close]

BLAST of HG10016451 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 95/197 (48.22%), Postives = 135/197 (68.53%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC IH +  +       L+E++  + G ++ L+ I A  GKW+  +E+R  M+   +   
Sbjct: 543 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG SSI ++G++HEFL+G   HP  E+++ KL EV E+L+ + GYEP    +L  +E EE
Sbjct: 603 PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN-GYEPEISQVLQIIEEEE 662

Query: 140 -KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDR 199
            KE ++  HSEKLAI +GLI+T+    IRV+KNLRVCGDCH+VAKL+S++Y REII+RDR
Sbjct: 663 MKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDR 722

Query: 200 VRFHHFRDGNCSCKDYW 216
            RFHHFR+G CSC D+W
Sbjct: 723 YRFHHFRNGQCSCNDFW 738

[Close]

BLAST of HG10016451 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 89/196 (45.41%), Postives = 134/196 (68.37%), Query Frame = 0


Query: 20  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIP 79
           AC +  +  +G ++   LM++    SG Y+ L+ + A++G W E +E+RL+MK   +   
Sbjct: 452 ACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511

Query: 80  PGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQQDEGYEPATKDLLLDLENEE 139
           PG S I ++G++HEF+     HP  ++I+  L E++++L+   GY P T  +LL+LE E+
Sbjct: 512 PGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL-AGYRPITTQVLLNLEEED 571

Query: 140 KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRV 199
           KE  +  HSEK+A AFGLI+T PG  IR+VKNLR+C DCH+  KL+S++Y R+I +RDR 
Sbjct: 572 KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRK 631

Query: 200 RFHHFRDGNCSCKDYW 216
           RFHHF+DG+CSC DYW
Sbjct: 632 RFHHFQDGSCSCMDYW 646

The following BLAST results are available for this feature:

BLAST of HG10016451 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440725.1	6.0e-101	91.84	PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Cucumis melo] ...	[more]
XP_004143583.2	2.1e-98	89.29	pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus] >KGN4883...	[more]
XP_038882528.1	1.4e-97	88.27	pentatricopeptide repeat-containing protein At5g66520 [Benincasa hispida]	[more]
XP_022978438.1	1.1e-94	88.78	pentatricopeptide repeat-containing protein At5g66520 [Cucurbita maxima]	[more]
XP_023543056.1	5.4e-94	87.76	pentatricopeptide repeat-containing protein At5g66520 [Cucurbita pepo subsp. pep...	[more]

BLAST of HG10016451 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJY7	2.3e-55	53.30	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9LW32	9.4e-49	49.49	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]
Q9LN01	1.2e-48	46.94	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
O82380	2.1e-48	48.22	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9FI80	2.1e-48	45.41	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]

BLAST of HG10016451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKZ8	2.9e-101	91.84	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B1S8	2.9e-101	91.84	pentatricopeptide repeat-containing protein At5g66520 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KKE0	1.0e-98	89.29	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G5027...	[more]
A0A6J1IT43	5.3e-95	88.78	pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GDX2	1.3e-93	87.24	pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita moschata OX=3...	[more]

BLAST of HG10016451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66520.1	1.6e-56	53.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	6.7e-50	49.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	8.7e-50	46.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	1.5e-49	48.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	1.5e-49	45.41	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 80..205 e-value: 1.2E-36 score: 125.4
None	No IPR available	PANTHER	PTHR47926:SF189	BNAA07G12550D PROTEIN	coord: 19..201
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 19..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016451.1	HG10016451.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0016554	cytidine to uridine editing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding