HG10016446 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTACGAGCGCCTCGGGGAGGATCCTACCGTTGGCTTGTTGGAAGGAAGGCTGAAGAGATCAACCAGTTTGCCAACCCGAGTACTCGGTTCTGGCTCGAGGAAACCAACATCTGAGATTATATTTCCCGAGTTTGCTCAAGCGAAACAGAAGCAGTCGAAGAAAGCTAACAAAGGAGGACACCCTCTTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCAACAGCCAGGCCTGAATTTGCTAGGTATCTAGAGTATTTGAAGGAAGGAGGACTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTTTAAATGA ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTACGAGCGCCTCGGGGAGGATCCTACCGTTGGCTTGTTGGAAGGAAGGCTGAAGAGATCAACCAGTTTGCCAACCCGAGTACTCGGTTCTGGCTCGAGGAAACCAACATCTGAGATTATATTTCCCGAGTTTGCTCAAGCGAAACAGAAGCAGTCGAAGAAAGCTAACAAAGGAGGACACCCTCTTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCAACAGCCAGGCCTGAATTTGCTAGGTATCTAGAGTATTTGAAGGAAGGAGGACTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTTTAAATGA ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTACGAGCGCCTCGGGGAGGATCCTACCGTTGGCTTGTTGGAAGGAAGGCTGAAGAGATCAACCAGTTTGCCAACCCGAGTACTCGGTTCTGGCTCGAGGAAACCAACATCTGAGATTATATTTCCCGAGTTTGCTCAAGCGAAACAGAAGCAGTCGAAGAAAGCTAACAAAGGAGGACACCCTCTTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCAACAGCCAGGCCTGAATTTGCTAGGTATCTAGAGTATTTGAAGGAAGGAGGACTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTTTAAATGA MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQAKQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK Homology
BLAST of HG10016446 vs. NCBI nr
Match: XP_038883128.1 (uncharacterized protein LOC120074173 [Benincasa hispida]) HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58 Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of HG10016446 vs. NCBI nr
Match: XP_011658493.1 (uncharacterized protein LOC105436031 [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53 Identity = 106/118 (89.83%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of HG10016446 vs. NCBI nr
Match: XP_008440743.1 (PREDICTED: uncharacterized protein LOC103485064 [Cucumis melo]) HSP 1 Score: 210.7 bits (535), Expect = 6.9e-51 Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of HG10016446 vs. NCBI nr
Match: KAE8647591.1 (hypothetical protein Csa_003995 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50 Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of HG10016446 vs. NCBI nr
Match: XP_022132575.1 (uncharacterized protein LOC111005403 [Momordica charantia]) HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48 Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A0A0KKF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502830 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 9.4e-54 Identity = 106/118 (89.83%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A1S3B2K9 (uncharacterized protein LOC103485064 OS=Cucumis melo OX=3656 GN=LOC103485064 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51 Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A6J1BSU6 (uncharacterized protein LOC111005403 OS=Momordica charantia OX=3673 GN=LOC111005403 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A6J1ILF9 (uncharacterized protein LOC111478516 OS=Cucurbita maxima OX=3661 GN=LOC111478516 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48 Identity = 101/119 (84.87%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A5D3CLB7 (Auxilin-like protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001970 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48 Identity = 95/113 (84.07%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of HG10016446 vs. TAIR 10
Match: AT4G36500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 6.9e-25 Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 0
BLAST of HG10016446 vs. TAIR 10
Match: AT2G18210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21 Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 0
BLAST of HG10016446 vs. TAIR 10
Match: AT3G50900.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits to 45 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20 Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of HG10016446 vs. TAIR 10
Match: AT5G66490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17 Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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