HG10016446 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10016446
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAuxilin-like protein 1 isoform X4
LocationChr03: 5105384 .. 5105740 (-)
RNA-Seq ExpressionHG10016446
SyntenyHG10016446
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTACGAGCGCCTCGGGGAGGATCCTACCGTTGGCTTGTTGGAAGGAAGGCTGAAGAGATCAACCAGTTTGCCAACCCGAGTACTCGGTTCTGGCTCGAGGAAACCAACATCTGAGATTATATTTCCCGAGTTTGCTCAAGCGAAACAGAAGCAGTCGAAGAAAGCTAACAAAGGAGGACACCCTCTTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCAACAGCCAGGCCTGAATTTGCTAGGTATCTAGAGTATTTGAAGGAAGGAGGACTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTTTAAATGA

mRNA sequence

ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTACGAGCGCCTCGGGGAGGATCCTACCGTTGGCTTGTTGGAAGGAAGGCTGAAGAGATCAACCAGTTTGCCAACCCGAGTACTCGGTTCTGGCTCGAGGAAACCAACATCTGAGATTATATTTCCCGAGTTTGCTCAAGCGAAACAGAAGCAGTCGAAGAAAGCTAACAAAGGAGGACACCCTCTTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCAACAGCCAGGCCTGAATTTGCTAGGTATCTAGAGTATTTGAAGGAAGGAGGACTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTTTAAATGA

Coding sequence (CDS)

ATGTTGAGAGCTTTGAGTACCAGGAGATGTCCTCACAGGTACGAGCGCCTCGGGGAGGATCCTACCGTTGGCTTGTTGGAAGGAAGGCTGAAGAGATCAACCAGTTTGCCAACCCGAGTACTCGGTTCTGGCTCGAGGAAACCAACATCTGAGATTATATTTCCCGAGTTTGCTCAAGCGAAACAGAAGCAGTCGAAGAAAGCTAACAAAGGAGGACACCCTCTTTTCAGTTTCTTTGATTTTCGCCGCAAGAGGAAGTCAACAGCCAGGCCTGAATTTGCTAGGTATCTAGAGTATTTGAAGGAAGGAGGACTGTGGGATTTGAAAGCAAATGCTCCTGTAATCTACTTTAAATGA

Protein sequence

MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQAKQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Homology
BLAST of HG10016446 vs. NCBI nr
Match: XP_038883128.1 (uncharacterized protein LOC120074173 [Benincasa hispida])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYERLGEDPTV LLEGRLKR+TSLPTRVLGSGSRKPTSEIIFPEFAQA
Sbjct: 1   MLRALSTRRCPHRYERLGEDPTVSLLEGRLKRATSLPTRVLGSGSRKPTSEIIFPEFAQA 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
            QKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Sbjct: 61  NQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 118

BLAST of HG10016446 vs. NCBI nr
Match: XP_011658493.1 (uncharacterized protein LOC105436031 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53
Identity = 106/118 (89.83%), Postives = 110/118 (93.22%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYE   EDPT+ LLEGRLKR+TSLPT VLGSGSRKP  +I FPEFAQA
Sbjct: 1   MLRALSTRRCPHRYEFFAEDPTLSLLEGRLKRATSLPTIVLGSGSRKPAFDITFPEFAQA 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           KQKQSKKANKGGHP+FSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Sbjct: 61  KQKQSKKANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 118

BLAST of HG10016446 vs. NCBI nr
Match: XP_008440743.1 (PREDICTED: uncharacterized protein LOC103485064 [Cucumis melo])

HSP 1 Score: 210.7 bits (535), Expect = 6.9e-51
Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRY+ L EDPT+ LLEG+L+R+TSLPT VLGSGSRK   +I  PEFAQA
Sbjct: 1   MLRALSTRRCPHRYKFLAEDPTISLLEGKLRRATSLPTIVLGSGSRKSAFDITVPEFAQA 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           KQKQSK+ANKGGHP+FSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Sbjct: 61  KQKQSKRANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 118

BLAST of HG10016446 vs. NCBI nr
Match: KAE8647591.1 (hypothetical protein Csa_003995 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYE   EDPT+ LLEGRLKR+TSLPT VLGSGSRKP  +I FPEFAQA
Sbjct: 1   MLRALSTRRCPHRYEFFAEDPTLSLLEGRLKRATSLPTIVLGSGSRKPAFDITFPEFAQA 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAP 114
           KQKQSKKANKGGHP+FSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAP
Sbjct: 61  KQKQSKKANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAP 113

BLAST of HG10016446 vs. NCBI nr
Match: XP_022132575.1 (uncharacterized protein LOC111005403 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYERLGEDPT+ LLEGRLKR+TSLPTRVLGS SRK   EI+F E AQ 
Sbjct: 1   MLRALSTRRCPHRYERLGEDPTISLLEGRLKRATSLPTRVLGSASRKSPLEIVFAETAQV 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           K +QSKKA++ GHPLFSFFDFRRKRK+TA+PEFARYLEY+KEGGLWDLKANAPVIY+K
Sbjct: 61  KHRQSKKASR-GHPLFSFFDFRRKRKTTAKPEFARYLEYVKEGGLWDLKANAPVIYYK 117

BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A0A0KKF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502830 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.4e-54
Identity = 106/118 (89.83%), Postives = 110/118 (93.22%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYE   EDPT+ LLEGRLKR+TSLPT VLGSGSRKP  +I FPEFAQA
Sbjct: 1   MLRALSTRRCPHRYEFFAEDPTLSLLEGRLKRATSLPTIVLGSGSRKPAFDITFPEFAQA 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           KQKQSKKANKGGHP+FSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Sbjct: 61  KQKQSKKANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 118

BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A1S3B2K9 (uncharacterized protein LOC103485064 OS=Cucumis melo OX=3656 GN=LOC103485064 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-51
Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRY+ L EDPT+ LLEG+L+R+TSLPT VLGSGSRK   +I  PEFAQA
Sbjct: 1   MLRALSTRRCPHRYKFLAEDPTISLLEGKLRRATSLPTIVLGSGSRKSAFDITVPEFAQA 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           KQKQSK+ANKGGHP+FSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Sbjct: 61  KQKQSKRANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 118

BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A6J1BSU6 (uncharacterized protein LOC111005403 OS=Momordica charantia OX=3673 GN=LOC111005403 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYERLGEDPT+ LLEGRLKR+TSLPTRVLGS SRK   EI+F E AQ 
Sbjct: 1   MLRALSTRRCPHRYERLGEDPTISLLEGRLKRATSLPTRVLGSASRKSPLEIVFAETAQV 60

Query: 61  KQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           K +QSKKA++ GHPLFSFFDFRRKRK+TA+PEFARYLEY+KEGGLWDLKANAPVIY+K
Sbjct: 61  KHRQSKKASR-GHPLFSFFDFRRKRKTTAKPEFARYLEYVKEGGLWDLKANAPVIYYK 117

BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A6J1ILF9 (uncharacterized protein LOC111478516 OS=Cucurbita maxima OX=3661 GN=LOC111478516 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 101/119 (84.87%), Postives = 107/119 (89.92%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           MLRALSTRRCPHRYERLGEDPT+ LLE +LKR+TSLPTRVLGSGS KP SE I    AQ 
Sbjct: 1   MLRALSTRRCPHRYERLGEDPTISLLEVKLKRATSLPTRVLGSGSVKPISETI----AQV 60

Query: 61  KQKQSKKA-NKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
           KQKQSKK  NKGGHPLFSFFDFRRKRKSTA+PEFARY+EY+KEGGLWDLKANAPVIYFK
Sbjct: 61  KQKQSKKGNNKGGHPLFSFFDFRRKRKSTAKPEFARYVEYVKEGGLWDLKANAPVIYFK 115

BLAST of HG10016446 vs. ExPASy TrEMBL
Match: A0A5D3CLB7 (Auxilin-like protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001970 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 95/113 (84.07%), Postives = 103/113 (91.15%), Query Frame = 0

Query: 6    STRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQAKQKQS 65
            S RRCPHRY+ L EDPT+ LLEG+L+R+TSLPT VLGSGSRK   +I  PEFAQAKQKQS
Sbjct: 1440 SLRRCPHRYKFLAEDPTISLLEGKLRRATSLPTIVLGSGSRKSAFDITVPEFAQAKQKQS 1499

Query: 66   KKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 119
            K+ANKGGHP+FSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK
Sbjct: 1500 KRANKGGHPIFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPVIYFK 1552

BLAST of HG10016446 vs. TAIR 10
Match: AT4G36500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 6.9e-25
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 0

Query: 1   MLRALSTRRCPHR--YERLGEDPTVGLLEGRLKRSTSL----PTRVLGSGSRKPTSEIIF 60
           MLR+LSTR    R  YER+ +D T  LL  +L+RSTS+    P+  LG+G   PT   I 
Sbjct: 3   MLRSLSTRTRSRRGGYERVSDDSTFSLLGAKLRRSTSVPYYAPSIKLGAGG-VPT---IL 62

Query: 61  PEFAQAKQKQSKKANKGGHPLFSFFDFRRKRKSTARPEFARYLEYLKEGGLWDLKANAPV 119
            E  + K K+ K   K  HP+FS F  ++K+ +T +PEF+RYLEYLKEGG+WD +ANAPV
Sbjct: 63  EELPRQKSKKVKPTGKFSHPIFSLFYGKKKKSTTTKPEFSRYLEYLKEGGMWDARANAPV 122

BLAST of HG10016446 vs. TAIR 10
Match: AT2G18210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21
Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 0

Query: 1   MLRALSTRRCPHR--YERLGEDPTVGLLEGRLKRSTSLP--TRVLGSGSRKPTSEIIFPE 60
           MLR LSTR    R  YER+ +D T  LL  +L+RSTS+P     +  G   P   +I  +
Sbjct: 3   MLRNLSTRTRSRRGGYERVSDDSTFSLLGAKLRRSTSVPYYAPSIRLGGDFP---VILEK 62

Query: 61  FAQAKQKQSKKANKGGHPLFSFFD-FRR--KRKSTARPEFARYLEYLKEGGLWDLKANAP 119
             + K  ++   +K  HP+FS FD +RR  K+K+TA+PEF+RY EYLKE G+WDL++N+P
Sbjct: 63  LPRQKPTKTVVTSKLSHPIFSLFDGYRRHNKKKATAKPEFSRYHEYLKESGMWDLRSNSP 122

BLAST of HG10016446 vs. TAIR 10
Match: AT3G50900.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits to 45 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLGEDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFAQA 60
           M RA+STR+    YE+LG++      E RLKR +S+P  V G  SR P  E+        
Sbjct: 1   MFRAMSTRKIHGGYEKLGDE------EARLKRVSSVPASVYGH-SRNPVQEV-------K 60

Query: 61  KQKQSKKANKGGHPLFSFFD--FRRKRK--------STARPEFARYLEYLKEGGLWDLKA 119
           K   +K      HPLFSFFD  F+RK+K        +TA+PEFARY+EY++EGG+WD  +
Sbjct: 61  KTPTAKPTGGSVHPLFSFFDVHFQRKKKNTAKKKSLATAKPEFARYMEYVREGGVWDPSS 114

BLAST of HG10016446 vs. TAIR 10
Match: AT5G66490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17
Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 0

Query: 1   MLRALSTRRCPHRYERLG--EDPTVGLLEGRLKRSTSLPTRVLGSGSRKPTSEIIFPEFA 60
           M+RALSTR+    Y++LG  E+   GLLE    +  S+PT   G   +            
Sbjct: 1   MIRALSTRKVRGSYKKLGDEEEAGAGLLE---VKPESVPTNPHGQSPK------------ 60

Query: 61  QAKQKQSKKANKGGHPLFSFFDFRRKRK------STARPEFARYLEYLKEGGLWDLKANA 119
               K  +K     HPLFSFF+   KRK      +TA+PEFARYLEY+KEGG+WD  +N 
Sbjct: 61  --VNKPVEKTRGSAHPLFSFFEMSLKRKKKKKSTTTAKPEFARYLEYVKEGGVWDNTSNG 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883128.11.2e-5897.46uncharacterized protein LOC120074173 [Benincasa hispida][more]
XP_011658493.11.9e-5389.83uncharacterized protein LOC105436031 [Cucumis sativus][more]
XP_008440743.16.9e-5185.59PREDICTED: uncharacterized protein LOC103485064 [Cucumis melo][more]
KAE8647591.12.0e-5089.38hypothetical protein Csa_003995 [Cucumis sativus][more]
XP_022132575.12.5e-4883.05uncharacterized protein LOC111005403 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KKF49.4e-5489.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502830 PE=4 SV=1[more]
A0A1S3B2K93.3e-5185.59uncharacterized protein LOC103485064 OS=Cucumis melo OX=3656 GN=LOC103485064 PE=... [more]
A0A6J1BSU61.2e-4883.05uncharacterized protein LOC111005403 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1ILF95.9e-4884.87uncharacterized protein LOC111478516 OS=Cucurbita maxima OX=3661 GN=LOC111478516... [more]
A0A5D3CLB75.9e-4884.07Auxilin-like protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
AT4G36500.16.9e-2550.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G18210.11.6e-2147.20unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G50900.11.8e-2044.53unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G66490.14.1e-1741.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35291PROTEIN SHROOM-LIKEcoord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10016446.1HG10016446.1mRNA