HG10016422 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016422
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	pleiotropic regulatory locus 1
Location	Chr03: 4952854 .. 4953863 (-)
RNA-Seq Expression	HG10016422
Synteny	HG10016422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGAATTGGAAGCAAGCGGCCACGTCCAGATTGTCATGCTCCATGGAAAAATTATAGGGTCATAAGTGGTCATTTAGGGTGTGTAAGGTCTATTGCATTTGATCCTAGTAACATGTGGTTTTGTACTGGTTCAGCAGATCGTACCATCAAGATTTGGGATGTTGCAACTGCAAAGTTAAAACTCACATTGACAGGCCATACTGATCAAATACGAGGTGTTGCTGTTAGCAGCAAACATACCTACATATTTTCGGCTGGTGATGATAAACAAGTCAAATGCTGGGACCTCGAACAAAACAAGGTAATCAGTTCCCCTGGTCATTTGAGTGGTGTCTAGTCTGGCTCTTCATCCAACTATTGATATTTTGCTTACTGGGGGACGTGATTCTGTCTGTCGAGCGTGGGACATTCGAAGTAAGGTGCAAGTTCATGCCCTCTCTGGCCATTATTACACAATTTGTTCTGTTTTTTGTCGACCCACCGATCCACAGGTTGTGAGTGGCTCCCATGATTCAACTATTAAGTTTTGGGACCTTAGATATGGAAAGACTATGACAACTAACACATCATAAGAAATCTGTTCGAGCAATGGCACAACATCCTAAACAGCACAGTTTCTTTGCATCTGCTTCAGCTGACAACATCAAGAAATTTAATCTTCCCAGAGGGGAGTTTGTGCATAACATGCTTTCTCAGCAGAAGAGTATAATCAATGCGATGGATGTCAATGAGAAGGGTGTTATGGTGACTGGTGGTGACAATGGTAGTTTATGGTTTTGGGATTGGAAGACTGGCCATAACTTTCAGCAATCACAAACAATTGTTCAGCCTGGCTCGTTGGATAGTGAAGCTGCTATTTATGCTCTGTCTTACGACATCACTGGTTCGAGGCTTGTTACTTGTGAAACCGACAAAACTATTAAAATGTGGAAAGAGGATGAAAATGCTACCCCTCAAACTCATCCCCTCAACATCAAGCCATCCAAAGATATCAGAAGATTTTAG

mRNA sequence

ATGGAAAGAATTGGAAGCAAGCGGCCACGTCCAGATTGTCATGCTCCATGGAAAAATTATAGGGTCATAAGTGGTCATTTAGGGTGTGTAAGGTCTATTGCATTTGATCCTAGTAACATGTGGTTTTGTACTGGTTCAGCAGATCGTACCATCAAGATTTGGGATGTTGCAACTGCAAAGTTAAAACTCACATTGACAGGCCATACTGATCAAATACGAGGTGTTGCTGTTAGCAGCAAACATACCTACATATTTTCGGCTGGTGATGATAAACAAGTCAAATGCTGGGACCTCGAACAAAACAAGCACAGTTTCTTTGCATCTGCTTCAGCTGACAACATCAAGAAATTTAATCTTCCCAGAGGGGAGTTTGTGCATAACATGCTTTCTCAGCAGAAGAGTATAATCAATGCGATGGATGTCAATGAGAAGGGTGTTATGGTGACTGGTGGTGACAATGGTAGTTTATGGTTTTGGGATTGGAAGACTGGCCATAACTTTCAGCAATCACAAACAATTGTTCAGCCTGGCTCGTTGGATAGTGAAGCTGCTATTTATGCTCTGTCTTACGACATCACTGGTTCGAGGCTTGTTACTTGTGAAACCGACAAAACTATTAAAATGTGGAAAGAGGATGAAAATGCTACCCCTCAAACTCATCCCCTCAACATCAAGCCATCCAAAGATATCAGAAGATTTTAG

Coding sequence (CDS)

ATGGAAAGAATTGGAAGCAAGCGGCCACGTCCAGATTGTCATGCTCCATGGAAAAATTATAGGGTCATAAGTGGTCATTTAGGGTGTGTAAGGTCTATTGCATTTGATCCTAGTAACATGTGGTTTTGTACTGGTTCAGCAGATCGTACCATCAAGATTTGGGATGTTGCAACTGCAAAGTTAAAACTCACATTGACAGGCCATACTGATCAAATACGAGGTGTTGCTGTTAGCAGCAAACATACCTACATATTTTCGGCTGGTGATGATAAACAAGTCAAATGCTGGGACCTCGAACAAAACAAGCACAGTTTCTTTGCATCTGCTTCAGCTGACAACATCAAGAAATTTAATCTTCCCAGAGGGGAGTTTGTGCATAACATGCTTTCTCAGCAGAAGAGTATAATCAATGCGATGGATGTCAATGAGAAGGGTGTTATGGTGACTGGTGGTGACAATGGTAGTTTATGGTTTTGGGATTGGAAGACTGGCCATAACTTTCAGCAATCACAAACAATTGTTCAGCCTGGCTCGTTGGATAGTGAAGCTGCTATTTATGCTCTGTCTTACGACATCACTGGTTCGAGGCTTGTTACTTGTGAAACCGACAAAACTATTAAAATGTGGAAAGAGGATGAAAATGCTACCCCTCAAACTCATCCCCTCAACATCAAGCCATCCAAAGATATCAGAAGATTTTAG

Protein sequence

MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAKLKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNKHSFFASASADNIKKFNLPRGEFVHNMLSQQKSIINAMDVNEKGVMVTGGDNGSLWFWDWKTGHNFQQSQTIVQPGSLDSEAAIYALSYDITGSRLVTCETDKTIKMWKEDENATPQTHPLNIKPSKDIRRF

Homology

[Close]

BLAST of HG10016422 vs. NCBI nr
Match: XP_022138465.1 (protein pleiotropic regulatory locus 1 [Momordica charantia] >XP_022138466.1 protein pleiotropic regulatory locus 1 [Momordica charantia] >XP_022138467.1 protein pleiotropic regulatory locus 1 [Momordica charantia] >XP_022138468.1 protein pleiotropic regulatory locus 1 [Momordica charantia])

HSP 1 Score: 395.6 bits (1015), Expect = 3.0e-106
Identity = 207/338 (61.24%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +QIRG+AVS+KHTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 207 LKLTLTGHIEQIRGLAVSNKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEFVHNMLSQQK+I
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFVHNMLSQQKTI 386

[Close]

BLAST of HG10016422 vs. NCBI nr
Match: XP_008458420.1 (PREDICTED: protein pleiotropic regulatory locus 1 [Cucumis melo] >XP_008458421.1 PREDICTED: protein pleiotropic regulatory locus 1 [Cucumis melo])

HSP 1 Score: 394.4 bits (1012), Expect = 6.7e-106
Identity = 206/338 (60.95%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 207 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEFVHNMLSQQK+I
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFVHNMLSQQKTI 386

[Close]

BLAST of HG10016422 vs. NCBI nr
Match: XP_038874340.1 (protein pleiotropic regulatory locus 1 [Benincasa hispida])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 205/338 (60.65%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 207 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEF+HNMLSQQK+I
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFMHNMLSQQKTI 386

[Close]

BLAST of HG10016422 vs. NCBI nr
Match: XP_004150502.1 (protein pleiotropic regulatory locus 1 [Cucumis sativus] >KGN47433.1 hypothetical protein Csa_021734 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-105
Identity = 204/338 (60.36%), Postives = 218/338 (64.50%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 140 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 199

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 200 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 259

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 260 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 319

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEFVHNMLSQQK+I
Sbjct: 320 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFVHNMLSQQKTI 379

[Close]

BLAST of HG10016422 vs. NCBI nr
Match: XP_022959374.1 (protein pleiotropic regulatory locus 1 [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 9.6e-105
Identity = 201/337 (59.64%), Postives = 217/337 (64.39%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 207 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 -------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSII 234
                                    K + FASASADNIKKFNLPRGEF+HNMLSQQK+II
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKENSFASASADNIKKFNLPRGEFMHNMLSQQKTII 386

[Close]

BLAST of HG10016422 vs. ExPASy Swiss-Prot
Match: Q42384 (Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana OX=3702 GN=PRL1 PE=1 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.9e-102
Identity = 190/337 (56.38%), Postives = 211/337 (62.61%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI S+ PRP+ HAPWKNYRVI GHLG VRS+AFDPSN WFCTGSADRTIKIWDVAT  
Sbjct: 150 MERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV 209

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329

Query: 181 -------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSII 234
                                    K + FASASADN KKF+LP+GEF HNMLSQQK+II
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTII 389

[Close]

BLAST of HG10016422 vs. ExPASy Swiss-Prot
Match: Q39190 (Protein pleiotropic regulator PRL2 OS=Arabidopsis thaliana OX=3702 GN=PRL2 PE=2 SV=2)

HSP 1 Score: 357.1 bits (915), Expect = 1.5e-97
Identity = 183/336 (54.46%), Postives = 206/336 (61.31%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MER+ S+ PRP+ HAPWKNYRV+ GHLG VRS+AFDPSN WFCTGSADRTIKIWDVAT  
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV 203

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH  Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 264 PTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323

Query: 181 ------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSIIN 234
                                   K + F SASADNIKKF+LP+GEF HNMLS Q+ IIN
Sbjct: 324 LRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSLPKGEFCHNMLSLQRDIIN 383

[Close]

BLAST of HG10016422 vs. ExPASy Swiss-Prot
Match: Q2KID6 (Pleiotropic regulator 1 OS=Bos taurus OX=9913 GN=PLRG1 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.6e-64
Identity = 132/322 (40.99%), Postives = 166/322 (51.55%), Query Frame = 0


Query: 9   PRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAKLKLTLTGH 68
           P+P  H PWK YRVISGHLG VR IA +P N WF TGSADRTIKIWD+A+ KLKL+LTGH
Sbjct: 185 PKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGH 244

Query: 69  TDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK-------------------------- 128
              +RGV VS++  Y+FS G+DKQVKCWDLE NK                          
Sbjct: 245 ISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVT 304

Query: 129 ------------------------------------------------------------ 188
                                                                       
Sbjct: 305 CSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 364

Query: 189 ------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSIINAMDVNEK 227
                             H  FAS S DNIK++  P G F+ N LS   +IIN + VN  
Sbjct: 365 VTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQN-LSGHNAIINTLTVNSD 424

[Close]

BLAST of HG10016422 vs. ExPASy Swiss-Prot
Match: O43660 (Pleiotropic regulator 1 OS=Homo sapiens OX=9606 GN=PLRG1 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-63
Identity = 131/322 (40.68%), Postives = 166/322 (51.55%), Query Frame = 0


Query: 9   PRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAKLKLTLTGH 68
           P+P  H PWK YRVISGHLG VR IA +P N WF TGSADRTIKIWD+A+ KLKL+LTGH
Sbjct: 186 PKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGH 245

Query: 69  TDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK-------------------------- 128
              +RGV VS++  Y+FS G+DKQVKCWDLE NK                          
Sbjct: 246 ISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVT 305

Query: 129 ------------------------------------------------------------ 188
                                                                       
Sbjct: 306 CSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 365

Query: 189 ------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSIINAMDVNEK 227
                             H  FAS S DNIK++  P G F+ N LS   +IIN + VN  
Sbjct: 366 VTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQN-LSGHNAIINTLTVNSD 425

[Close]

BLAST of HG10016422 vs. ExPASy Swiss-Prot
Match: Q9WUC8 (Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.5e-63
Identity = 132/322 (40.99%), Postives = 166/322 (51.55%), Query Frame = 0


Query: 9   PRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAKLKLTLTGH 68
           P+P  H PWK YRVISGHLG VR IA +P N WF TGSADRTIKIWD+A+ KLKL+LTGH
Sbjct: 186 PKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGH 245

Query: 69  TDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK-------------------------- 128
              +RGV VS++  Y+FS G+DKQVKCWDLE NK                          
Sbjct: 246 ISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVT 305

Query: 129 ------------------------------------------------------------ 188
                                                                       
Sbjct: 306 CSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTR 365

Query: 189 ------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSIINAMDVNEK 227
                             H  FAS S DNIK++  P G F+ N LS   +IIN + VN  
Sbjct: 366 VTLTNHKKSVRAVVLHPLHYTFASGSPDNIKQWKFPDGGFIQN-LSGHNAIINTLAVNTD 425

[Close]

BLAST of HG10016422 vs. ExPASy TrEMBL
Match: A0A6J1CB66 (protein pleiotropic regulatory locus 1 OS=Momordica charantia OX=3673 GN=LOC111009634 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 207/338 (61.24%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +QIRG+AVS+KHTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 207 LKLTLTGHIEQIRGLAVSNKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEFVHNMLSQQK+I
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFVHNMLSQQKTI 386

[Close]

BLAST of HG10016422 vs. ExPASy TrEMBL
Match: A0A1S3C7C3 (protein pleiotropic regulatory locus 1 OS=Cucumis melo OX=3656 GN=LOC103497843 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.2e-106
Identity = 206/338 (60.95%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 207 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEFVHNMLSQQK+I
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFVHNMLSQQKTI 386

[Close]

BLAST of HG10016422 vs. ExPASy TrEMBL
Match: A0A0A0KD37 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G319790 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 204/338 (60.36%), Postives = 218/338 (64.50%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 140 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 199

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQNK------------------ 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQNK                  
Sbjct: 200 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 259

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 260 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 319

Query: 181 ---------------------------HSFFASASADNIKKFNLPRGEFVHNMLSQQKSI 234
                                      HS FASASADNIKKFNLPRGEFVHNMLSQQK+I
Sbjct: 320 DLRYGKTMTTLTYHKKSVRAMALHPKEHS-FASASADNIKKFNLPRGEFVHNMLSQQKTI 379

[Close]

BLAST of HG10016422 vs. ExPASy TrEMBL
Match: A0A6J1KVD4 (protein pleiotropic regulatory locus 1 OS=Cucurbita maxima OX=3661 GN=LOC111499045 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.7e-105
Identity = 201/337 (59.64%), Postives = 217/337 (64.39%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 207 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 -------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSII 234
                                    K + FASASADNIKKFNLPRGEF+HNMLSQQK+II
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKENSFASASADNIKKFNLPRGEFMHNMLSQQKTII 386

[Close]

BLAST of HG10016422 vs. ExPASy TrEMBL
Match: A0A6J1H7V9 (protein pleiotropic regulatory locus 1 OS=Cucurbita moschata OX=3662 GN=LOC111460363 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.7e-105
Identity = 201/337 (59.64%), Postives = 217/337 (64.39%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI SK PRP  HAPW+NYRVISGHLG VRS+AFDPSN WFCTGSADRTIKIWDVA+ K
Sbjct: 147 MERIPSKWPRPVWHAPWRNYRVISGHLGWVRSVAFDPSNTWFCTGSADRTIKIWDVASGK 206

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 207 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRHYHGHLSGVYCLALH 266

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 267 PTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 326

Query: 181 -------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSII 234
                                    K + FASASADNIKKFNLPRGEF+HNMLSQQK+II
Sbjct: 327 DLRYGKTMTTLTYHKKSVRAMALHPKENSFASASADNIKKFNLPRGEFMHNMLSQQKTII 386

[Close]

BLAST of HG10016422 vs. TAIR 10
Match: AT4G15900.1 (pleiotropic regulatory locus 1 )

HSP 1 Score: 371.3 bits (952), Expect = 5.6e-103
Identity = 190/337 (56.38%), Postives = 211/337 (62.61%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MERI S+ PRP+ HAPWKNYRVI GHLG VRS+AFDPSN WFCTGSADRTIKIWDVAT  
Sbjct: 150 MERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV 209

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH +Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329

Query: 181 -------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSII 234
                                    K + FASASADN KKF+LP+GEF HNMLSQQK+II
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTII 389

[Close]

BLAST of HG10016422 vs. TAIR 10
Match: AT3G16650.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-98
Identity = 183/336 (54.46%), Postives = 206/336 (61.31%), Query Frame = 0


Query: 1   MERIGSKRPRPDCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAK 60
           MER+ S+ PRP+ HAPWKNYRV+ GHLG VRS+AFDPSN WFCTGSADRTIKIWDVAT  
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV 203

Query: 61  LKLTLTGHTDQIRGVAVSSKHTYIFSAGDDKQVKCWDLEQN------------------- 120
           LKLTLTGH  Q+RG+AVS++HTY+FSAGDDKQVKCWDLEQN                   
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 264 PTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323

Query: 181 ------------------------KHSFFASASADNIKKFNLPRGEFVHNMLSQQKSIIN 234
                                   K + F SASADNIKKF+LP+GEF HNMLS Q+ IIN
Sbjct: 324 LRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSLPKGEFCHNMLSLQRDIIN 383

[Close]

BLAST of HG10016422 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 54/228 (23.68%), Postives = 97/228 (42.54%), Query Frame = 0


Query: 12  DCHAPWKNYRVISGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAKLKLTLTGHTDQ 71
           D  +P++  +V+ GH   V  + F+P +    +GS D TI+IW+V T K    +  H+  
Sbjct: 113 DARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP 172

Query: 72  IRGVAVSSKHTYIFSAGDDKQVKCWDLEQN---------------------KHSFFASAS 131
           I  V  +   + I SA  D   K WD ++                         F   A+
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVAT 232

Query: 132 ADN-IKKFNLPRGEFVHNMLSQQKS---IINAMDVNEKGVMVTGGDNGSLWFWDWKTGHN 191
            D+ +K  N   G+F+            I +A  V     +V+G ++  ++ WD +  + 
Sbjct: 233 LDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNI 292

Query: 192 FQQSQTIVQPGSLDSEAAI--YALSYDITGSRLVTCETDKTIKMWKED 213
            Q+ +     G  D+  ++  + +  +I+ S       DKTI++WK+D
Sbjct: 293 LQRLE-----GHTDAVISVSCHPVQNEISSS---GNHLDKTIRIWKQD 332

[Close]

BLAST of HG10016422 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 45/187 (24.06%), Postives = 77/187 (41.18%), Query Frame = 0


Query: 24  SGHLGCVRSIAFDPSNMWFCTGSADRTIKIWDVATAKLKLTLTGHTDQIRGVAVSSKHTY 83
           +GH   +  +AF     +  + S D+T+K+WDV T  L  TL GHT+    V  + +   
Sbjct: 68  TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127

Query: 84  IFSAGDDKQVKCWDLEQNKHSFFASASADNIKKFNLPRGEFVHNMLSQQKSIINAMDVNE 143
           I S   D+ V+ WD+   K      A +D                       + A+D N 
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSDP----------------------VTAVDFNR 187

Query: 144 KG-VMVTGGDNGSLWFWDWKTGHNFQQSQTIVQPGSLDSEAAIYALSYDITGSRLVTCET 203
            G ++V+   +G    WD  TGH     +T++     D    +  + +   G  ++    
Sbjct: 188 DGSLIVSSSYDGLCRIWDSGTGHCV---KTLID----DENPPVSFVRFSPNGKFILVGTL 225

Query: 204 DKTIKMW 210
           D T+++W
Sbjct: 248 DNTLRLW 225

[Close]

BLAST of HG10016422 vs. TAIR 10
Match: AT1G48630.1 (receptor for activated C kinase 1B )

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-10
Identity = 48/198 (24.24%), Postives = 83/198 (41.92%), Query Frame = 0


Query: 25  GHLGCVRSIAFDPSNM--WFCTGSADRTIKIWDVATAKLKLTLTGHTDQIRGVAVSSKHT 84
           GH   V  + F P+ +     + S D+T+K+W++   KL+ TL GH+  +  VAVS   +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206

Query: 85  YIFSAGDDKQVKCWDLEQNKHSFFASASADNIKKFNLPRGEFVHN---------MLSQQK 144
              S G D  +  WDL + K            K ++L  G  +H+         + +  +
Sbjct: 207 LCASGGKDGVILLWDLAEGK------------KLYSLEAGSIIHSLCFSPNRYWLCAATE 266

Query: 145 SIINAMDVNEKGVMVTGGDNGSLWFWDWKTGHNFQQSQTIVQPGSLDSEAAIY--ALSYD 204
           + I   D+  K V+            D K     +  +T    G  +    IY  +L++ 
Sbjct: 267 NSIRIWDLESKSVVE-----------DLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNWS 321

Query: 205 ITGSRLVTCETDKTIKMW 210
             G+ L +  TD  I++W
Sbjct: 327 ADGNTLFSGYTDGVIRVW 321

The following BLAST results are available for this feature:

BLAST of HG10016422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138465.1	3.0e-106	61.24	protein pleiotropic regulatory locus 1 [Momordica charantia] >XP_022138466.1 pro...	[more]
XP_008458420.1	6.7e-106	60.95	PREDICTED: protein pleiotropic regulatory locus 1 [Cucumis melo] >XP_008458421.1...	[more]
XP_038874340.1	1.5e-105	60.65	protein pleiotropic regulatory locus 1 [Benincasa hispida]	[more]
XP_004150502.1	2.5e-105	60.36	protein pleiotropic regulatory locus 1 [Cucumis sativus] >KGN47433.1 hypothetica...	[more]
XP_022959374.1	9.6e-105	59.64	protein pleiotropic regulatory locus 1 [Cucurbita moschata]	[more]

BLAST of HG10016422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42384	7.9e-102	56.38	Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana OX=3702 GN=PRL1 P...	[more]
Q39190	1.5e-97	54.46	Protein pleiotropic regulator PRL2 OS=Arabidopsis thaliana OX=3702 GN=PRL2 PE=2 ...	[more]
Q2KID6	8.6e-64	40.99	Pleiotropic regulator 1 OS=Bos taurus OX=9913 GN=PLRG1 PE=2 SV=1	[more]
O43660	1.9e-63	40.68	Pleiotropic regulator 1 OS=Homo sapiens OX=9606 GN=PLRG1 PE=1 SV=1	[more]
Q9WUC8	2.5e-63	40.99	Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1	[more]

BLAST of HG10016422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB66	1.4e-106	61.24	protein pleiotropic regulatory locus 1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3C7C3	3.2e-106	60.95	protein pleiotropic regulatory locus 1 OS=Cucumis melo OX=3656 GN=LOC103497843 P...	[more]
A0A0A0KD37	1.2e-105	60.36	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A6J1KVD4	4.7e-105	59.64	protein pleiotropic regulatory locus 1 OS=Cucurbita maxima OX=3661 GN=LOC1114990...	[more]
A0A6J1H7V9	4.7e-105	59.64	protein pleiotropic regulatory locus 1 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of HG10016422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15900.1	5.6e-103	56.38	pleiotropic regulatory locus 1	[more]
AT3G16650.1	1.1e-98	54.46	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	1.6e-12	23.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.9e-10	24.06	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G48630.1	2.5e-10	24.24	receptor for activated C kinase 1B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 84..98 score: 33.82 coord: 42..56 score: 38.0 coord: 197..211 score: 26.54
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 16..55 e-value: 1.1E-9 score: 48.1 coord: 172..210 e-value: 0.16 score: 21.1 coord: 121..160 e-value: 1.3 score: 16.3 coord: 58..97 e-value: 9.1E-9 score: 45.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 62..97 e-value: 4.4E-6 score: 27.3 coord: 18..55 e-value: 6.6E-10 score: 39.4 coord: 181..210 e-value: 0.14 score: 13.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 23..64 score: 15.654854
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 65..106 score: 13.181907
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 178..219 score: 8.770704
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 103..233 e-value: 3.4E-29 score: 103.8 coord: 4..102 e-value: 6.2E-36 score: 126.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..233
None	No IPR available	PANTHER	PTHR19923:SF1	BNAA01G27690D PROTEIN	coord: 2..102
None	No IPR available	PANTHER	PTHR19923:SF1	BNAA01G27690D PROTEIN	coord: 105..233
None	No IPR available	PANTHER	PTHR19923	WD40 REPEAT PROTEINPRL1/PRL2-RELATED	coord: 2..102
None	No IPR available	PANTHER	PTHR19923	WD40 REPEAT PROTEINPRL1/PRL2-RELATED	coord: 105..233
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 23..58 score: 12.235586
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 65..102 score: 10.785595
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 17..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016422.1	HG10016422.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1902494	catalytic complex
molecular_function	GO:0005515	protein binding