HG10016400 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016400
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein SHI RELATED SEQUENCE 1
Location	Chr03: 4786424 .. 4787357 (+)
RNA-Seq Expression	HG10016400
Synteny	HG10016400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGCTCGGGATCCGGTGGAGGTGGAATAAGTTGCCAAGATTGTGGCAACCAAGCGAAGAAAGACTGCAGCCATATGCGGTGTAGAACATGCTGCAAGAGCCGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCCAAGCGTCGCGAGCGCCAAGACAAACTGGCTGCCTTACAAACCCATCATCAACACCAACTCCATCTTCATGGAGACAATAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCCTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAATACTTCTGGTACAAAAATACAATCATCTCTCCCCCTCTCCCTTCACTTTTTATTTTTTTTTAGATTGCGTGTTGCAGATGTCAAACTTCTCTTCTCTCTATACTCTATAGTAAACCCCATCACCTTTTTCTGTCTTCTTTACTTAACTGTGTTTTTTCAGTATTCCTGACCCATTCATCTTCTCTGTTTAATTTAATCCCTAATTTCTCCATATATACAAATCTCTTTATTTTCTAGGGTTCGAAATTGGGAATTTCCCACCCGAGTTAAACTCTCCGGCTGTCTTCCGTTGCGTTCGTGTCACCTCTACCGACGATACCGACGATCAATACGCCTATCAAACGGCCGTAAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCGGAAAATAATTATATTCCACCGGCTGAGACCTCATCCGGTGGTGGTGGGAGTAGTAGTGGAGTGCAAATGCAACCACTGAATTTCATCGCTGCTGCTGCTGATGCCACCACCGCAAGCGGTGGTTCCACAGCCGCATTACCCTTGATGGATCCCTCTTCTTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCCACCACCAAGATCTTAA

mRNA sequence

ATGATAAGCTCGGGATCCGGTGGAGGTGGAATAAGTTGCCAAGATTGTGGCAACCAAGCGAAGAAAGACTGCAGCCATATGCGGTGTAGAACATGCTGCAAGAGCCGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCCAAGCGTCGCGAGCGCCAAGACAAACTGGCTGCCTTACAAACCCATCATCAACACCAACTCCATCTTCATGGAGACAATAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCCTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAATACTTCTGGGTTCGAAATTGGGAATTTCCCACCCGAGTTAAACTCTCCGGCTGTCTTCCGTTGCGTTCGTGTCACCTCTACCGACGATACCGACGATCAATACGCCTATCAAACGGCCGTAAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCGGAAAATAATTATATTCCACCGGCTGAGACCTCATCCGGTGGTGGTGGGAGTAGTAGTGGAGTGCAAATGCAACCACTGAATTTCATCGCTGCTGCTGCTGATGCCACCACCGCAAGCGGTGGTTCCACAGCCGCATTACCCTTGATGGATCCCTCTTCTTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCCACCACCAAGATCTTAA

Coding sequence (CDS)

ATGATAAGCTCGGGATCCGGTGGAGGTGGAATAAGTTGCCAAGATTGTGGCAACCAAGCGAAGAAAGACTGCAGCCATATGCGGTGTAGAACATGCTGCAAGAGCCGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCCAAGCGTCGCGAGCGCCAAGACAAACTGGCTGCCTTACAAACCCATCATCAACACCAACTCCATCTTCATGGAGACAATAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCCTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAATACTTCTGGGTTCGAAATTGGGAATTTCCCACCCGAGTTAAACTCTCCGGCTGTCTTCCGTTGCGTTCGTGTCACCTCTACCGACGATACCGACGATCAATACGCCTATCAAACGGCCGTAAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCGGAAAATAATTATATTCCACCGGCTGAGACCTCATCCGGTGGTGGTGGGAGTAGTAGTGGAGTGCAAATGCAACCACTGAATTTCATCGCTGCTGCTGCTGATGCCACCACCGCAAGCGGTGGTTCCACAGCCGCATTACCCTTGATGGATCCCTCTTCTTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCCACCACCAAGATCTTAA

Protein sequence

MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

Homology

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BLAST of HG10016400 vs. NCBI nr
Match: XP_038881348.1 (protein SHI RELATED SEQUENCE 1-like [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK
Sbjct: 95  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 154

Query: 61  LAALQT--HHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELN 120
           LAALQ+  HH HQLHLHGDNNPKRHRDYNPTS+SSLACTLIPTNNNTSG EIGNFP ELN
Sbjct: 155 LAALQSHHHHHHQLHLHGDNNPKRHRDYNPTSTSSLACTLIPTNNNTSGLEIGNFPAELN 214

Query: 121 SPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSS 180
           SPAVFRCVRV+STDDTD+QYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSS
Sbjct: 215 SPAVFRCVRVSSTDDTDEQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSS 274

Query: 181 SGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAG 226
           SGV  QPLNFIA AADATTASGGSTAALPLMDPSSLYSTPLNSFMAG
Sbjct: 275 SGV--QPLNFIAGAADATTASGGSTAALPLMDPSSLYSTPLNSFMAG 319

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BLAST of HG10016400 vs. NCBI nr
Match: XP_004149998.1 (protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN48885.1 hypothetical protein Csa_003789 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 3.5e-115
Identity = 218/239 (91.21%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK
Sbjct: 98  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 157

Query: 61  LAALQTHHQH----QLHLH-GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPP 120
           LAALQTHH H    QL LH GDNNPKRHRDYN   SSSLACTLIPTNNNTSG EIGNFP 
Sbjct: 158 LAALQTHHHHHHQQQLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPA 217

Query: 121 ELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGG 180
           ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGG
Sbjct: 218 ELNSPAVFRCVRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGG 277

Query: 181 GSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           GSSSGV  QPLNFIA AADATT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 278 GSSSGV--QPLNFIAGAADATTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 331

[Close]

BLAST of HG10016400 vs. NCBI nr
Match: XP_008440782.1 (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0025701.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa] >TYK12576.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 422.5 bits (1085), Expect = 2.3e-114
Identity = 216/238 (90.76%), Postives = 218/238 (91.60%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK
Sbjct: 96  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 155

Query: 61  LAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPE 120
           LAALQTHH H   QL LH GDNNPKRHRDYN   SSSLACTLIPTNNNTSG EIGNFP E
Sbjct: 156 LAALQTHHHHQQQQLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPAE 215

Query: 121 LNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGG 180
           LNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGG
Sbjct: 216 LNSPAVFRCVRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGG 275

Query: 181 SSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           SSSGV  QPLNFI  AAD TT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 276 SSSGV--QPLNFITGAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

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BLAST of HG10016400 vs. NCBI nr
Match: XP_022979003.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022979004.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 417.5 bits (1072), Expect = 7.4e-113
Identity = 213/239 (89.12%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MI SGSGGGGISCQDCGNQAKKDC+HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+K
Sbjct: 84  MIGSGSGGGGISCQDCGNQAKKDCAHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEK 143

Query: 61  LAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSP 120
           LAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP  NNTSG EIGNFP ELNSP
Sbjct: 144 LAALQT--QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSP 203

Query: 121 AVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGG 180
           AVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS     GGG
Sbjct: 204 AVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGG 263

Query: 181 GSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           GSSSGV  QPLNFI  A DATTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 264 GSSSGV--QPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 316

[Close]

BLAST of HG10016400 vs. NCBI nr
Match: XP_023543255.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-112
Identity = 213/238 (89.50%), Postives = 219/238 (92.02%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MI SGSGGGGISCQDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+K
Sbjct: 97  MIGSGSGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEK 156

Query: 61  LAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSP 120
           LAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP  NNTSG EIGNFP ELNSP
Sbjct: 157 LAALQT--QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSP 216

Query: 121 AVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS----GGGG 180
           AVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS    GGGG
Sbjct: 217 AVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGG 276

Query: 181 SSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           SSSGV  QPLNFI  A DATTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 277 SSSGV--QPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of HG10016400 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 266.5 bits (680), Expect = 2.8e-70
Identity = 147/248 (59.27%), Postives = 179/248 (72.18%), Query Frame = 0


Query: 4   SGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAA 63
           SG G GG+SCQDCGNQAKKDCSHMRCRTCCKSRGF C THV+STWVPAAKRRERQ +LA 
Sbjct: 135 SGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLAT 194

Query: 64  LQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSPAVF 123
           +Q   Q QL   G++ PKRHR+  P +SSSL CT IP++   SG E+GNFP E++S AVF
Sbjct: 195 VQP--QTQLP-RGESVPKRHRENLPATSSSLVCTRIPSH---SGLEVGNFPAEVSSSAVF 254

Query: 124 RCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN------NYIPPAETSSGGGGS 183
           RCVRV+S +D ++++AYQTAV+IGGH+FKGILYD GP +      N +   E+SSGGGG+
Sbjct: 255 RCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGGA 314

Query: 184 SSGVQMQPLNFI-------AAAADATTASGG----STAALPLMDPSSLYSTPLNSFMAGT 235
                 Q LN I       A A+ +T   GG    S AA   +DP++LY TP+N+FMAGT
Sbjct: 315 ------QQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFMAGT 370

[Close]

BLAST of HG10016400 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.0e-66
Identity = 139/234 (59.40%), Postives = 169/234 (72.22%), Query Frame = 0


Query: 6   SGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQ 65
           SGGGGISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ +LAALQ
Sbjct: 122 SGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQ 181

Query: 66  THHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRC 125
              Q Q H + +NN K  R     S+SSL  T +P  +NT+G E+G FP ++ + AVF+C
Sbjct: 182 --QQQQGHNNNNNNHKNKRQREDPSASSLVSTRLP--SNTNGLEVGKFPSKVRTSAVFQC 241

Query: 126 VRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNY--IPPAETSSGGGGSSSGVQM 185
           ++++S +D +DQ AYQ AV+IGGHVFKGILYDQG E+ Y  +  A   +  GGS+ GVQ 
Sbjct: 242 IQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGSAGGVQH 301

Query: 186 QPLNFIAAAADATTASGGSTAALP--LMDPSSLYSTPLNSFM-AGTQFFPPPRS 235
              N  A A   TT+ G +TAA P   +DP SL+  PL++FM AGTQFFPP RS
Sbjct: 302 HHHNSAAVATATTTSGGDATAAGPSNFLDP-SLFPAPLSTFMVAGTQFFPPSRS 350

[Close]

BLAST of HG10016400 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.6e-65
Identity = 144/244 (59.02%), Postives = 171/244 (70.08%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           M+ SGSG GG SCQDCGNQ+KKDCSHMRCRTCCKSRG  C THVKSTWVPAAKRRERQ +
Sbjct: 108 MMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQ 167

Query: 61  LAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSP 120
           L+  Q   Q      G + PKR R+  P  S+S+A T IP +NNTSG E+GNFPPE++S 
Sbjct: 168 LSTGQQPQQ-----LGGSVPKRQRERIPARSTSMAYTRIP-SNNTSGLEVGNFPPEVSSS 227

Query: 121 AVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSG 180
           AVFRCVRV+S DD +++YAY+TAV+IGGHVFKG+LYDQG       PAE SS GGGS   
Sbjct: 228 AVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG-------PAERSSSGGGS--- 287

Query: 181 VQMQPLNFIAAAADATTASG---------GSTAALPLMDPSSL-YSTPLNSFMAGTQFFP 235
              QPLN I A   A+++S          GST+    +DP+SL Y TP+N+FM GT FF 
Sbjct: 288 ---QPLNLITAGPSASSSSPNVSCNNGVVGSTSD-HYIDPASLNYPTPINTFMTGTHFFS 331

[Close]

BLAST of HG10016400 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.0e-58
Identity = 133/247 (53.85%), Postives = 160/247 (64.78%), Query Frame = 0


Query: 9   GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH 68
           GG++CQDCGNQAKKDC HMRCRTCCKSRGFHC+THVKSTWVPAAKRRER  +LA+LQ H 
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 69  ------QHQLHLH----GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIG-NFPPEL 128
                 Q+   L     GDNN    +D++    S+LA T +   N+ SG E+  + PPE+
Sbjct: 181 ASSRETQNAKRLREASGGDNND--DKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEV 240

Query: 129 NSPAVFRCVRVTS-TDDTDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGG 188
           NSPA+FRCVRV+S  +D DDQ YAYQTAVNIGGH+FKGILYDQGPE+             
Sbjct: 241 NSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQ------------ 300

Query: 189 GSSSGVQMQPLNFIAAAADAT--------TASGGSTAALPLMDPSSLYSTPLNSFMAGTQ 235
                     LN +A+ A  T        T +G +   L ++DPSSLY   LNSF+AGT 
Sbjct: 301 ------DNHHLNLLASTATTTNVEETATKTVTGNNNNGL-MLDPSSLYPAQLNSFIAGTP 346

[Close]

BLAST of HG10016400 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-52
Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 0


Query: 2   ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRR 61
           + S +GG      G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRR
Sbjct: 102 VRSSTGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRR 161

Query: 62  ERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEI 121
           ERQ +LA L        +  G     D++ +  ++ +    S+LACT +  N ++SG E 
Sbjct: 162 ERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRV-VNASSSGLET 221

Query: 122 GNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAET 181
            + PPE++SPAVFRC+RV+S DD D++YAYQTAV+IGGHVFKGILYDQGP +++   + +
Sbjct: 222 SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSS 281

Query: 182 SSGGGGSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GT 234
            +G       + +      AA  +A TA   +  ++   DPSSLY   +TP N+F+A GT
Sbjct: 282 LNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSI---DPSSLYTAVATPFNAFVAGGT 341

[Close]

BLAST of HG10016400 vs. ExPASy TrEMBL
Match: A0A0A0KGL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 218/239 (91.21%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK
Sbjct: 98  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 157

Query: 61  LAALQTHHQH----QLHLH-GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPP 120
           LAALQTHH H    QL LH GDNNPKRHRDYN   SSSLACTLIPTNNNTSG EIGNFP 
Sbjct: 158 LAALQTHHHHHHQQQLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPA 217

Query: 121 ELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGG 180
           ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGG
Sbjct: 218 ELNSPAVFRCVRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGG 277

Query: 181 GSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           GSSSGV  QPLNFIA AADATT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 278 GSSSGV--QPLNFIAGAADATTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 331

[Close]

BLAST of HG10016400 vs. ExPASy TrEMBL
Match: A0A5A7SN81 (Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001580 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 216/238 (90.76%), Postives = 218/238 (91.60%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK
Sbjct: 96  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 155

Query: 61  LAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPE 120
           LAALQTHH H   QL LH GDNNPKRHRDYN   SSSLACTLIPTNNNTSG EIGNFP E
Sbjct: 156 LAALQTHHHHQQQQLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPAE 215

Query: 121 LNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGG 180
           LNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGG
Sbjct: 216 LNSPAVFRCVRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGG 275

Query: 181 SSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           SSSGV  QPLNFI  AAD TT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 276 SSSGV--QPLNFITGAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of HG10016400 vs. ExPASy TrEMBL
Match: A0A1S3B2J6 (protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 216/238 (90.76%), Postives = 218/238 (91.60%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK
Sbjct: 96  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 155

Query: 61  LAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPE 120
           LAALQTHH H   QL LH GDNNPKRHRDYN   SSSLACTLIPTNNNTSG EIGNFP E
Sbjct: 156 LAALQTHHHHQQQQLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPAE 215

Query: 121 LNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGG 180
           LNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGG
Sbjct: 216 LNSPAVFRCVRVSSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGG 275

Query: 181 SSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           SSSGV  QPLNFI  AAD TT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 276 SSSGV--QPLNFITGAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of HG10016400 vs. ExPASy TrEMBL
Match: A0A6J1IUW1 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.6e-113
Identity = 213/239 (89.12%), Postives = 220/239 (92.05%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MI SGSGGGGISCQDCGNQAKKDC+HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+K
Sbjct: 84  MIGSGSGGGGISCQDCGNQAKKDCAHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEK 143

Query: 61  LAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSP 120
           LAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP  NNTSG EIGNFP ELNSP
Sbjct: 144 LAALQT--QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSP 203

Query: 121 AVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGG 180
           AVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS     GGG
Sbjct: 204 AVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGG 263

Query: 181 GSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           GSSSGV  QPLNFI  A DATTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 264 GSSSGV--QPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 316

[Close]

BLAST of HG10016400 vs. ExPASy TrEMBL
Match: A0A6J1GE84 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453153 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 8.0e-113
Identity = 213/239 (89.12%), Postives = 219/239 (91.63%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           MI SGSGGGGISCQDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+K
Sbjct: 91  MIGSGSGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEK 150

Query: 61  LAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSP 120
           LAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP  NNTSG EIGNFP ELNSP
Sbjct: 151 LAALQT--QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSP 210

Query: 121 AVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGG 180
           AVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS     GGG
Sbjct: 211 AVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGG 270

Query: 181 GSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS 235
           GSSSGV  QPLNFI  A DATTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Sbjct: 271 GSSSGV--QPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 323

[Close]

BLAST of HG10016400 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 266.5 bits (680), Expect = 2.0e-71
Identity = 147/248 (59.27%), Postives = 179/248 (72.18%), Query Frame = 0


Query: 4   SGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAA 63
           SG G GG+SCQDCGNQAKKDCSHMRCRTCCKSRGF C THV+STWVPAAKRRERQ +LA 
Sbjct: 135 SGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLAT 194

Query: 64  LQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSPAVF 123
           +Q   Q QL   G++ PKRHR+  P +SSSL CT IP++   SG E+GNFP E++S AVF
Sbjct: 195 VQP--QTQLP-RGESVPKRHRENLPATSSSLVCTRIPSH---SGLEVGNFPAEVSSSAVF 254

Query: 124 RCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN------NYIPPAETSSGGGGS 183
           RCVRV+S +D ++++AYQTAV+IGGH+FKGILYD GP +      N +   E+SSGGGG+
Sbjct: 255 RCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGGA 314

Query: 184 SSGVQMQPLNFI-------AAAADATTASGG----STAALPLMDPSSLYSTPLNSFMAGT 235
                 Q LN I       A A+ +T   GG    S AA   +DP++LY TP+N+FMAGT
Sbjct: 315 ------QQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFMAGT 370

[Close]

BLAST of HG10016400 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-66
Identity = 144/244 (59.02%), Postives = 171/244 (70.08%), Query Frame = 0


Query: 1   MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDK 60
           M+ SGSG GG SCQDCGNQ+KKDCSHMRCRTCCKSRG  C THVKSTWVPAAKRRERQ +
Sbjct: 108 MMRSGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQ 167

Query: 61  LAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIGNFPPELNSP 120
           L+  Q   Q      G + PKR R+  P  S+S+A T IP +NNTSG E+GNFPPE++S 
Sbjct: 168 LSTGQQPQQ-----LGGSVPKRQRERIPARSTSMAYTRIP-SNNTSGLEVGNFPPEVSSS 227

Query: 121 AVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSG 180
           AVFRCVRV+S DD +++YAY+TAV+IGGHVFKG+LYDQG       PAE SS GGGS   
Sbjct: 228 AVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG-------PAERSSSGGGS--- 287

Query: 181 VQMQPLNFIAAAADATTASG---------GSTAALPLMDPSSL-YSTPLNSFMAGTQFFP 235
              QPLN I A   A+++S          GST+    +DP+SL Y TP+N+FM GT FF 
Sbjct: 288 ---QPLNLITAGPSASSSSPNVSCNNGVVGSTSD-HYIDPASLNYPTPINTFMTGTHFFS 331

[Close]

BLAST of HG10016400 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 225.3 bits (573), Expect = 5.0e-59
Identity = 133/247 (53.85%), Postives = 160/247 (64.78%), Query Frame = 0


Query: 9   GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH 68
           GG++CQDCGNQAKKDC HMRCRTCCKSRGFHC+THVKSTWVPAAKRRER  +LA+LQ H 
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 69  ------QHQLHLH----GDNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEIG-NFPPEL 128
                 Q+   L     GDNN    +D++    S+LA T +   N+ SG E+  + PPE+
Sbjct: 181 ASSRETQNAKRLREASGGDNND--DKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEV 240

Query: 129 NSPAVFRCVRVTS-TDDTDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGG 188
           NSPA+FRCVRV+S  +D DDQ YAYQTAVNIGGH+FKGILYDQGPE+             
Sbjct: 241 NSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQ------------ 300

Query: 189 GSSSGVQMQPLNFIAAAADAT--------TASGGSTAALPLMDPSSLYSTPLNSFMAGTQ 235
                     LN +A+ A  T        T +G +   L ++DPSSLY   LNSF+AGT 
Sbjct: 301 ------DNHHLNLLASTATTTNVEETATKTVTGNNNNGL-MLDPSSLYPAQLNSFIAGTP 346

[Close]

BLAST of HG10016400 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 208.0 bits (528), Expect = 8.3e-54
Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 0


Query: 2   ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRR 61
           + S +GG      G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRR
Sbjct: 102 VRSSTGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRR 161

Query: 62  ERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEI 121
           ERQ +LA L        +  G     D++ +  ++ +    S+LACT +  N ++SG E 
Sbjct: 162 ERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRV-VNASSSGLET 221

Query: 122 GNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAET 181
            + PPE++SPAVFRC+RV+S DD D++YAYQTAV+IGGHVFKGILYDQGP +++   + +
Sbjct: 222 SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSS 281

Query: 182 SSGGGGSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GT 234
            +G       + +      AA  +A TA   +  ++   DPSSLY   +TP N+F+A GT
Sbjct: 282 LNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSI---DPSSLYTAVATPFNAFVAGGT 341

[Close]

BLAST of HG10016400 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 208.0 bits (528), Expect = 8.3e-54
Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 0


Query: 2   ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRR 61
           + S +GG      G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRR
Sbjct: 102 VRSSTGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRR 161

Query: 62  ERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTSSSSLACTLIPTNNNTSGFEI 121
           ERQ +LA L        +  G     D++ +  ++ +    S+LACT +  N ++SG E 
Sbjct: 162 ERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRV-VNASSSGLET 221

Query: 122 GNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAET 181
            + PPE++SPAVFRC+RV+S DD D++YAYQTAV+IGGHVFKGILYDQGP +++   + +
Sbjct: 222 SHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSS 281

Query: 182 SSGGGGSSSGVQMQPLNFIAAAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GT 234
            +G       + +      AA  +A TA   +  ++   DPSSLY   +TP N+F+A GT
Sbjct: 282 LNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGSI---DPSSLYTAVATPFNAFVAGGT 341

The following BLAST results are available for this feature:

BLAST of HG10016400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881348.1	4.9e-117	94.71	protein SHI RELATED SEQUENCE 1-like [Benincasa hispida]	[more]
XP_004149998.1	3.5e-115	91.21	protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN48885.1 hypothetical protei...	[more]
XP_008440782.1	2.3e-114	90.76	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0025701.1 protein S...	[more]
XP_022979003.1	7.4e-113	89.12	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022979004.1 protein S...	[more]
XP_023543255.1	1.3e-112	89.50	protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10016400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	2.8e-70	59.27	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	7.0e-66	59.40	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9XGX0	1.6e-65	59.02	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9LQZ5	7.0e-58	53.85	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9FXH7	1.2e-52	48.58	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of HG10016400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGL4	1.7e-115	91.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1	[more]
A0A5A7SN81	1.1e-114	90.76	Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B2J6	1.1e-114	90.76	protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1	[more]
A0A6J1IUW1	3.6e-113	89.12	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 ...	[more]
A0A6J1GE84	8.0e-113	89.12	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145315...	[more]

BLAST of HG10016400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	2.0e-71	59.27	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	1.1e-66	59.02	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	5.0e-59	53.85	SHI-related sequence 5	[more]
AT1G19790.1	8.3e-54	48.58	SHI-related sequence 7	[more]
AT1G19790.2	8.3e-54	48.58	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 113..160 e-value: 1.4E-27 score: 93.3
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 12..54 e-value: 6.7E-28 score: 94.3
None	No IPR available	PFAM	PF05142	DUF702	coord: 10..161 e-value: 6.1E-67 score: 224.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..84
None	No IPR available	PANTHER	PTHR31604:SF25	PROTEIN SHI RELATED SEQUENCE 2	coord: 4..232
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 4..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016400.1	HG10016400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding