HG10016398 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016398
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Glutaredoxin domain-containing protein
Location	Chr03: 4763724 .. 4765468 (+)
RNA-Seq Expression	HG10016398
Synteny	HG10016398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGATTTCATTTTCAGTTGACTCTGGTTGTGGCGGTGATCACCCTCGCCGGCCTTTCTCCGGGAGATGGACTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGTCATCTACTCTAACAGGATTGCTATGTTTTCAAAATCCTACTGCCCGTATGTTCTTCTCTTCTCTATTCCTTTTTTATTACACAAACACACGCTTCATTCTTTTTCTTTTTCTTTTTCCTATTTTCTGCATCATTCGGTGGCTCAATGCGGTATGTCTACACATAGTAATCAATCAATCATTGTTTAGTGAGTTGTTGCTGCCAATGAACATGAAATTCTAATATTAGCGATTCTCGGCTTTTCGAGAAATGAATATAGGATATACGAATGATTCATTCGTGTTTTTTTGTTTTGGTTTTTTTAACCAATTCTGGACTTGAATAAGAAGCTTATATTTCCCTCCGAACAAATTAGCCGGCCCGATGTCCACAGGGCCAGAAAATTTTCTTGATTGCTATTGGGTTGGATTTTTTTCCCTCTCTTTCTTGGTGGTTTCTAGCTGACCAGTTTCCAATGGTCAGTGGGCCTTGAATGATAGGAATAACGCGGTAGTCGGCTGTGTATTGAATCATTTTTTATGTTGCTTAGGTCTTAGGCAGGGTTGTTTGGATTGACTTTTTGACTGGCTACTGCAAAAATGGTGTCTTTAAGCACTTAGAAAGTCAACTCAAACTGACCAGAATTCGTTTACAATAGACAAATTATATTGCTTAAATTCCTACTTTGTGCAATGACCCTCTAGCAATCTGGTTGGCAGGGCAATTTGATTGCTTTCTTTTGTAAATTGTAACATCAAAATTGTTGTTTACTTGTGCAATCATTTCAATTGGATTCCTGGGATCAGTATTACGGTTGTGGATTCTTTGCACTGTTTAGTCTTCCTGGTTGTACGCTATCCTGCCTTTCTTGAAGAGACGGTTATGGAGATTGCCCTATGTTAGCTAAAGGTTGCCATTTAATTTTTCAAAGAACTGATTGAGCTTTGTAATGAACGAGACCCCCTATTCTTATTTATGTACTGTTCCAACTTCCAACTGCCATAGGTTTCTTTCCTCTCTGTCCTGCTTTTGTAATTTCATTTATCAATAAAATGTTTTTTTTTGTTTCTTCTAAAATGGAAAGAAGGAATCTTCCTATACAAAAACCGATAACTACAAAAATATGGTCCTTTAAATGGTTTCTCTGTTCCTTTCTGAAGTGAATAATAATAATAATAATTAATAGACTCATATTCTGTTGTTTTATTCTGCTGGAAGATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGGTATTTATTCTGTTTAATTTTGTTGATCGTTTGCAATATTAATAATTGTTTGAAGAAGCATTTTCGTGACCACATAATGGGCATCTACATGTAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACAGGAAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGGTGAGCTCTCTCAGCTCCTTAATTATTCAACAGATTTCTACATGTCTTTTTCAGAGGAGTAAATCACTGTTTGGTTTGGTGTGGTTTCATATTTTATACAGATCTGAAAGCCGCAGTTGCCAGTGGTCAGTTGCAGAAACTTCTGGCTTCAAGTTGA

mRNA sequence

ATGAGGGGATTTCATTTTCAGTTGACTCTGGTTGTGGCGGTGATCACCCTCGCCGGCCTTTCTCCGGGAGATGGACTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGTCATCTACTCTAACAGGATTGCTATGTTTTCAAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACAGGAAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGATCTGAAAGCCGCAGTTGCCAGTGGTCAGTTGCAGAAACTTCTGGCTTCAAGTTGA

Coding sequence (CDS)

ATGAGGGGATTTCATTTTCAGTTGACTCTGGTTGTGGCGGTGATCACCCTCGCCGGCCTTTCTCCGGGAGATGGACTTACCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCAGAACGTCATCTACTCTAACAGGATTGCTATGTTTTCAAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGATCTCAAATTCAGAGTGTTCTACTAGACCTGACAGGAAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCTCTGATGATCTGAAAGCCGCAGTTGCCAGTGGTCAGTTGCAGAAACTTCTGGCTTCAAGTTGA

Protein sequence

MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS

Homology

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BLAST of HG10016398 vs. NCBI nr
Match: XP_004149976.1 (glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 6.3e-61
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRGFHFQLTLV+AVITLA L P D LTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL
Sbjct: 10  MRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 69

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTG+RTVPQIFVNGKHIGGSDDLKAAV
Sbjct: 70  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAV 129

Query: 121 ASGQLQKLLASS 133
           A+GQLQKLLAS+
Sbjct: 130 ANGQLQKLLAST 141

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BLAST of HG10016398 vs. NCBI nr
Match: XP_008440783.1 (PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis melo var. makuwa] >TYK12574.1 glutaredoxin-C3 [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRGFHFQLTLVVAVITLA L P DGL GAEAATSTSAFV NVIYSNRIAMFSKSYCPYCL
Sbjct: 3   MRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCL 62

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGGSDDLKAAV
Sbjct: 63  GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAV 122

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLAS+
Sbjct: 123 ASGQLQKLLAST 134

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BLAST of HG10016398 vs. NCBI nr
Match: XP_038881412.1 (glutaredoxin-C3 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-60
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           +RGF FQLTLVVAVITL+GLSP DGLTG EAATSTSAFV NVIYSNRIAMFSKSYCPYCL
Sbjct: 3   LRGFQFQLTLVVAVITLSGLSPRDGLTGVEAATSTSAFVHNVIYSNRIAMFSKSYCPYCL 62

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKR+FSELHEKP VVELDLRDDGSQIQSVLLDLTG+RTVPQIFVNGKHIGGSDDLKAAV
Sbjct: 63  GAKRMFSELHEKPLVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAV 122

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLASS
Sbjct: 123 ASGQLQKLLASS 134

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BLAST of HG10016398 vs. NCBI nr
Match: XP_023518077.1 (glutaredoxin-C3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 4.7e-56
Identity = 117/132 (88.64%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRG  FQLTL + VITL+ L P DGLTGA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC+
Sbjct: 2   MRG--FQLTLALVVITLSALRPRDGLTGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCM 61

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGRRTVPQIFVNGKHIGG+DDLKAAV
Sbjct: 62  GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAV 121

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLASS
Sbjct: 122 ASGQLQKLLASS 131

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BLAST of HG10016398 vs. NCBI nr
Match: XP_022963026.1 (glutaredoxin-C3 [Cucurbita moschata] >XP_022963027.1 glutaredoxin-C3 [Cucurbita moschata] >KAG6594793.1 Glutaredoxin-C3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026760.1 Glutaredoxin-C3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55
Identity = 116/132 (87.88%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRG  FQLTL + VITL+ L P DGL GA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC+
Sbjct: 2   MRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCM 61

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGRRTVPQIFVNGKHIGG+DDLKAAV
Sbjct: 62  GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAV 121

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLASS
Sbjct: 122 ASGQLQKLLASS 131

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BLAST of HG10016398 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-37
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 29  AEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQ 88
           A AA S SAFVQN I SN+I +FSKSYCPYCL +KRIFS+L E+PFVVELD R+DG QIQ
Sbjct: 27  AGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQ 86

Query: 89  SVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS 133
             LL+  GRRTVPQ+FVNGKHIGGSDDL AA+ SGQLQKLLA+S
Sbjct: 87  YELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

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BLAST of HG10016398 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.6e-35
Identity = 76/121 (62.81%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 12  VAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHE 71
           +AV  L  L+  D    A A  S SAFVQN IYSNRI +FSK+YCPY + AKRIF +L E
Sbjct: 10  IAVFLLLVLAEAD---PAAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKE 69

Query: 72  KPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAS 131
            P++VELDLR+DG +IQSVLLDL GR TVPQ+FVNG+H+GGSDD   A ++GQLQKLL +
Sbjct: 70  NPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGN 127

Query: 132 S 133
           S
Sbjct: 130 S 127

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BLAST of HG10016398 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-26
Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 10  LVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSEL 69
           L+VA++T         +  + A++  + FV+  I S++I +FSKSYCPYC  AK +F EL
Sbjct: 12  LLVALVTFI------SMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFREL 71

Query: 70  HEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 129
            + P+VVELD R+DG  IQ+ L ++ GRRTVPQ+F+NGKH+GGSDD   A  SG+L KLL
Sbjct: 72  DQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 128

Query: 130 ASS 133
             S
Sbjct: 132 GVS 128

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BLAST of HG10016398 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-26
Identity = 61/119 (51.26%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 13  AVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELH-- 72
           A+I LA L      + A    S S+FV++ + ++ + +FSKSYCPYC  AK +F EL   
Sbjct: 15  ALIALAALG-----SAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELK 74

Query: 73  EKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 130
           ++P+VVELD R+DG +IQ  L D+ GRRTVPQ+FV+GKH+GGSDD   A  SG+L KLL
Sbjct: 75  KEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLL 128

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BLAST of HG10016398 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.6e-20
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 40  QNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRT 99
           + ++ SN + +FSK+YCPYC   K++  +L  K  VVELD   DGS+IQ+ L + TG+RT
Sbjct: 7   KELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRT 66

Query: 100 VPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS 133
           VP +F+ GKHIGG D   A  + GQL  LL  +
Sbjct: 67  VPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEA 99

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BLAST of HG10016398 vs. ExPASy TrEMBL
Match: A0A0A0KKK8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRGFHFQLTLV+AVITLA L P D LTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL
Sbjct: 101 MRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 160

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTG+RTVPQIFVNGKHIGGSDDLKAAV
Sbjct: 161 GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAV 220

Query: 121 ASGQLQKLLASS 133
           A+GQLQKLLAS+
Sbjct: 221 ANGQLQKLLAST 232

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BLAST of HG10016398 vs. ExPASy TrEMBL
Match: A0A5A7SKA5 (Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001560 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.9e-61
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRGFHFQLTLVVAVITLA L P DGL GAEAATSTSAFV NVIYSNRIAMFSKSYCPYCL
Sbjct: 3   MRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCL 62

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGGSDDLKAAV
Sbjct: 63  GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAV 122

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLAS+
Sbjct: 123 ASGQLQKLLAST 134

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BLAST of HG10016398 vs. ExPASy TrEMBL
Match: A0A1S3B2P3 (glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.9e-61
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRGFHFQLTLVVAVITLA L P DGL GAEAATSTSAFV NVIYSNRIAMFSKSYCPYCL
Sbjct: 3   MRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCL 62

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RTVPQIFVNGKHIGGSDDLKAAV
Sbjct: 63  GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAV 122

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLAS+
Sbjct: 123 ASGQLQKLLAST 134

[Close]

BLAST of HG10016398 vs. ExPASy TrEMBL
Match: A0A6J1HE47 (glutaredoxin-C3 OS=Cucurbita moschata OX=3662 GN=LOC111463355 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 116/132 (87.88%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MRGFHFQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCL 60
           MRG  FQLTL + VITL+ L P DGL GA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC+
Sbjct: 2   MRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCM 61

Query: 61  GAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAV 120
           GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGRRTVPQIFVNGKHIGG+DDLKAAV
Sbjct: 62  GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAV 121

Query: 121 ASGQLQKLLASS 133
           ASGQLQKLLASS
Sbjct: 122 ASGQLQKLLASS 131

[Close]

BLAST of HG10016398 vs. ExPASy TrEMBL
Match: A0A6J1KY27 (glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111497386 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 6   FQLTLVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRI 65
           FQLTL + VITL+ L P DGL GAEA+TSTSAFVQNVI+SNRIAMFSKSYCPYC+GAKRI
Sbjct: 5   FQLTLALVVITLSALHPRDGLIGAEASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRI 64

Query: 66  FSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQL 125
           FSELHEKPFVVELDLRDDG QIQSVLLDLTGRRTVPQIFVNGKHIGG+DDLKAAVASGQL
Sbjct: 65  FSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQL 124

Query: 126 QKLLASS 133
           QKLLASS
Sbjct: 125 QKLLASS 131

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BLAST of HG10016398 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-38
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 29  AEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQ 88
           A AA S SAFVQN I SN+I +FSKSYCPYCL +KRIFS+L E+PFVVELD R+DG QIQ
Sbjct: 27  AGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQ 86

Query: 89  SVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS 133
             LL+  GRRTVPQ+FVNGKHIGGSDDL AA+ SGQLQKLLA+S
Sbjct: 87  YELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

[Close]

BLAST of HG10016398 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 120.6 bits (301), Expect = 9.8e-28
Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 10  LVVAVITLAGLSPGDGLTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSEL 69
           L+VA++T         +  + A++  + FV+  I S++I +FSKSYCPYC  AK +F EL
Sbjct: 12  LLVALVTFI------SMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFREL 71

Query: 70  HEKPFVVELDLRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 129
            + P+VVELD R+DG  IQ+ L ++ GRRTVPQ+F+NGKH+GGSDD   A  SG+L KLL
Sbjct: 72  DQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 128

Query: 130 ASS 133
             S
Sbjct: 132 GVS 128

[Close]

BLAST of HG10016398 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 87.8 bits (216), Expect = 7.0e-18
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 40  QNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRRT 99
           + ++ S  + +FSK+YCPYC+  K +  +L  K   VELD   DGSQIQS L + TG+RT
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 100 VPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS 133
           VP +F+ G HIGG D        G+L  LL  +
Sbjct: 67  VPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEA 99

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BLAST of HG10016398 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-16
Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 27  TGAEAATSTSAF-------VQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELD 86
           + + A++S+S+F       ++  +  N + ++SK++C YC   K +F  L  +P VVELD
Sbjct: 54  SSSAASSSSSSFGSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELD 113

Query: 87  -LRDDGSQIQSVLLDLTGRRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS 133
            L   G Q+Q VL  LTG+ TVP +FV GKHIGG  D       G L+ +LA +
Sbjct: 114 QLGPQGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

[Close]

BLAST of HG10016398 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-16
Identity = 40/94 (42.55%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 39  VQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGRR 98
           + + +  N   + SK+YCPYC+  K +  +L  K   VELD   DGSQIQS L + TG+R
Sbjct: 31  ILSYLIGNFSGICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQR 90

Query: 99  TVPQIFVNGKHIGGSDDLKAAVASGQLQKLLASS 133
           TVP +F+ G HIGG D        G+L  LL  +
Sbjct: 91  TVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEA 124

The following BLAST results are available for this feature:

BLAST of HG10016398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149976.1	6.3e-61	93.94	glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 ...	[more]
XP_008440783.1	1.8e-60	93.94	PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis...	[more]
XP_038881412.1	2.4e-60	93.18	glutaredoxin-C3 [Benincasa hispida]	[more]
XP_023518077.1	4.7e-56	88.64	glutaredoxin-C3 [Cucurbita pepo subsp. pepo]	[more]
XP_022963026.1	2.3e-55	87.88	glutaredoxin-C3 [Cucurbita moschata] >XP_022963027.1 glutaredoxin-C3 [Cucurbita ...	[more]

BLAST of HG10016398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVX1	1.7e-37	75.00	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	3.6e-35	62.81	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q8LFQ6	1.4e-26	49.59	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	4.0e-26	51.26	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
P55143	9.6e-20	47.31	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of HG10016398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK8	3.1e-61	93.94	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G50467...	[more]
A0A5A7SKA5	8.9e-61	93.94	Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0015...	[more]
A0A1S3B2P3	8.9e-61	93.94	glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1	[more]
A0A6J1HE47	1.1e-55	87.88	glutaredoxin-C3 OS=Cucurbita moschata OX=3662 GN=LOC111463355 PE=3 SV=1	[more]
A0A6J1KY27	1.5e-55	89.76	glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111497386 PE=3 SV=1	[more]

BLAST of HG10016398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77370.1	1.2e-38	75.00	Glutaredoxin family protein	[more]
AT5G20500.1	9.8e-28	49.59	Glutaredoxin family protein	[more]
AT5G40370.1	7.0e-18	44.09	Glutaredoxin family protein	[more]
AT4G28730.1	5.0e-16	38.60	Glutaredoxin family protein	[more]
AT5G40370.2	5.0e-16	42.55	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 48..66 score: 40.35 coord: 93..106 score: 54.17 coord: 107..120 score: 47.62
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 29..132 e-value: 4.3E-36 score: 124.9
None	No IPR available	PIRSR	PIRSR005894-2	PIRSR005894-2	coord: 35..130 e-value: 9.6E-8 score: 29.8
None	No IPR available	PANTHER	PTHR45694:SF4	GLUTAREDOXIN-C3	coord: 22..131
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 22..131
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 36..132 score: 22.640251
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 47..128 e-value: 4.37232E-44 score: 137.286
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 48..129 e-value: 7.5E-29 score: 97.8
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 48..110 e-value: 3.1E-16 score: 59.4
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 50..65
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 37..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016398.1	HG10016398.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity