HG10016325 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016325
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DUF1990 domain-containing protein
Location	Chr03: 4208314 .. 4212195 (-)
RNA-Seq Expression	HG10016325
Synteny	HG10016325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTAATAGGCAATCAGAGGTTTGCTTTTGCTCTTCTTGATGTAGATACAGCAATGAAAATATGACCCATTTCAGTGTGCTGGCAGCATCTTAGATTCATCTTTATTGGATTAAAAAATACTTTTGATCCCTCAACTCGTGAGGATTTACACTCGAAAATATGAAAATTATGAATTTTATAATTTTATTTTGAATTTTCCTTTACGAGTAGATCAATTCTAATGGGACTAATTATTAATGTTTCAAAATTTTATTTATTTTTCAGTAAGCGATTTGTCCCGAAATATTGGATGCCTTGATATGTAAATACAGATTGTTACCTTGAGATATTAATCTTTGCCTCAATATATAGATGGTTTCTCTAAGATATTGGTTGCATATATATAGATTAAGGGTATGTTGTTTTGGAGGGATTTTAAAATGGTTTAGATCTATTTTGACTTGTCATGAATCATTCAAAATCAATTTAAACTAGATTTTCATACCATTGAAAATGGTTTTAAACTATTAAAGGCATTTTCGAATTTTTTGAAATAAATGATAAATGTGATTTTAATGAATTTAAAATCACTCCCAAACATTTTTTTTCTTACTTTAGTATAAAGGGTTGGTTTGAAATATTAATTAGCTCTTAAAGTAAGCAGAGGTAAGTTAATATATAGTATCTATTAGCGATTAAGATATATATGACTCAAATTCTCACATCCCATTATTCTAGAAAAGATTGTTTCAGGATATGTGTTGCCTTCATATGCCTTTATGACTCAAATTCTCACATCCCATTGTTTCAGGATATGTGTTGCCAACGGGAGTATTTAATTTTGTATCTAATAAATTTTTATTGAAAAAAAAATAGATTAAAAATCTATTAGACAAAATATTAAAAGCTAAAAAATTTATTAGATAATTTAGTGACAACATATCTATTAAATGTGAATATATCACATTTTTTTTAAAAAAAAAAAAAAAAACAACAACATGTTAGTTAGAGATTCTAAATATTTGAACATTTGATTCACGATATATTATTTTTACTAGTTGAACTATGTTAAGTTTAATGTGAATCATTTCACTATTATATTATTGAAAAGTAGATAGAAGCATCTATTTTTCTAATATTTATGATGACAATAAATAATTTTAGTATGTATATTATAATAAGCCATCAAATGAATAATAATCCTTTTTTGTTTTAAGAAATCATTTTATAAGTCAAAGTAAACCTAATTCAACGACAATTGACATGTCTTCTCCCAAATTTGGTGGCTGAAATCTCAACATCTAACCTATTGTACTAAAGAATAATTTGTGGAAAATTATTATAAACATAAAAAATGTCAAACTATTACGTATATATAAAAATTTCACTATTTATCAACGACATAATTCTATTGCAAAAATTTTCTATATTTGTAAATAGTTTGACTTATTTTTCTATATTTGTAAATAGTTTTGCTAATTTTTCTATATTTAAAAACCGTCCATTTCATCCCTTTATTATTATTGAATTAGAAAATAATAATAATAATAAAATGGGGACCAATGGGAGTTCTCGAGTTTGAACTACAAGTCGTCTGGACTGAAACTACTGAAAACTACACGTCGACTTGTAGCTTTCTTCTTCGCTAACCAACTCTCTCCTGCTCTGTGACACTATCTTCAGTGCTTTCGATTCAGAGAACTGCGATAGCGCAGAAGCAGCGAAGCTGAAGTAATTGCTCTTCGGTATGTATCTTCTTCCCCTTCCTTCTTTTCTAATCTCTTCTCTCCAATCCGTACTTCTCTTCTTACACATTTCTTCTTCAATCTGTGAATTTTTTATTGCTTCTGCTTCTATTTCGTTTGAAGACTCAATCGACGCACCGTATAATTATCGCCTTCTAAATAAGCTTTTCAAGTATTTATTAATCTATTAGATTCCAATTCTTTAGCAGTTTGTCCCAAATTTCTCCGACCAAAACGCTTCAGTGCAGTACAGATTTCGTTTCGAGGTTTCTGACTTAATTGGATCGTGGATCAAATTTCCTTCTGTTCTTATGGAAACTCTTTAGGGTTCAGGGAACTAAAATCGTAGATCGTTGTTTGTTTTCATTTTGGGGGGCTATTGTACAATCCGTATTAGTGACTTAGTTTTATTTGAAGGGCGTTGCTGTTGTGGATTAAGATGGTGTTCTTGTGTTGGTCTCGCCCATCTCCTCAGGAGCAGAAGGCCTGCATTGAAAGGCAAGAACGATGAGAAAATTCTCATACATATAGGCTTGTCTCTTTTTTTTTTTCTAAGTGGAATGTTATATGATGTTCATCAATAGGGCTGGTTCCTTCAATTATAGCAGCAAGTTTAGAGGAGCTACTTCTGATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGTTGGCTAATACACTTTTTGGTTGAAGGGTAATCTATTAGACAAATATTTAATCCACCCCAAATTTTGTAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCGTTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAAGGATACCAATAAGGCTAGGACATGTTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGTTAGTTGTTCTTTCTTCATTTTTCTTCCTCTTCTTTTCTCCCTCATTTGCTTGTTAGCTTACCTACAGACTACTCATCTTGCAAAGAATCTGCCATAGTTGTGAAATTAGAGTTAGTATTTCATGCAATTATAGCTCAATGGTGTGATTTTAAATTGTTTTATCAATGTCTTTTCCTTGATGACTTAGATGTATACTCAATTGAATTCTACCTCTGATTTCACATAGTCGTCAATTTACTTTCTTAGAGAAAGTTTATCTCTAAGAAGCACGGATAGGAATACAACATAGACACGATGATACGATATAGTTTTAAAATCTAGGACTTGGGCATAGAAAGGACATGTTGATTAAAATATACATTTTTAAAAATATATATCATTTTTATATAAGAACGAAATATAAGGCCAATGAATTTATGCATTTATATGTTTAAAAAGCTATTTTGATGTATTTTTATGCATGTGTAACAAATATTAAATCTACTTATACTTTGTACAACTAGTGTCTAACACATCTATATTGCACAAATAAGTGTTCAATGGACACGGACGGTAGCCAAACTAGCCAAACTAGAGGTACTAACTTGTGTATATTTAGCCCATGCACACTAAAGTATCAAGTCTTCAACCAAGTTTCTCTCTTTGTACATATACAAGAAGCAGAGACTTCTATCAAGAAGAACACCCCAGTCTGTCCCCAATATTCTTATCACTCAGATAATCTGCATCTTCTCAGATAACATAGTCCATCCATTCATTTCTTCCAAGCTAATTTTTTTAATTGTTCTTTTCTAATTTGTGTTATTGCTTTTCCCTATACTTCTTTGTATTTATGTACTTGATAGTTGATAGTCCAGGTTTTTTTAATCTCACTCTGGATCCTATCAATGGCAAGTGTGAGTAATATGATCTTAAATTCTGACAATTTCAGGCCGGTGAAGAACGGTTTTCAATTGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCATATATTATCATTCCTTAGTTATCCCTACGTAATTCTTCGGCAAAAGTATTTTGCTCATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCCAGTCATTCCTAA

mRNA sequence

ATGAAGGTAATAGGCAATCAGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCGTTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAAGGATACCAATAAGGCTAGGACATGTTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGGTTTTCAATTGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCATATATTATCATTCCTTAGTTATCCCTACGTAATTCTTCGGCAAAAGTATTTTGCTCATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCCAGTCATTCCTAA

Coding sequence (CDS)

ATGAAGGTAATAGGCAATCAGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCGTTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAAGGATACCAATAAGGCTAGGACATGTTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGGTTTTCAATTGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCATATATTATCATTCCTTAGTTATCCCTACGTAATTCTTCGGCAAAAGTATTTTGCTCATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCCAGTCATTCCTAA

Protein sequence

MKVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

Homology

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BLAST of HG10016325 vs. NCBI nr
Match: XP_004134836.1 (UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical protein Csa_003747 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DTNK RTC
Sbjct: 74  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRDTNKGRTC 133

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPY+ILRQKYFAH
Sbjct: 134 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYIILRQKYFAH 193

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLT +HS
Sbjct: 194 QSTNAVKKYLTPTHS 208

[Close]

BLAST of HG10016325 vs. NCBI nr
Match: XP_031742966.1 (UPF0548 protein At2g17695 isoform X2 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DTNK RTC
Sbjct: 60  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRDTNKGRTC 119

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPY+ILRQKYFAH
Sbjct: 120 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYIILRQKYFAH 179

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLT +HS
Sbjct: 180 QSTNAVKKYLTPTHS 194

[Close]

BLAST of HG10016325 vs. NCBI nr
Match: XP_022950650.1 (UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo] >XP_023543886.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 124/135 (91.85%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTC
Sbjct: 73  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYVNENRGTNMARTC 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFA+
Sbjct: 133 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAY 192

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLTA HS
Sbjct: 193 QSTNAVKKYLTAKHS 207

[Close]

BLAST of HG10016325 vs. NCBI nr
Match: KAG7034054.1 (UPF0548 protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 124/135 (91.85%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTC
Sbjct: 59  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYVNENRGTNMARTC 118

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFA+
Sbjct: 119 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAY 178

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLTA HS
Sbjct: 179 QSTNAVKKYLTAKHS 193

[Close]

BLAST of HG10016325 vs. NCBI nr
Match: XP_038883223.1 (UPF0548 protein At2g17695 isoform X3 [Benincasa hispida])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 123/135 (91.11%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DT KA TC
Sbjct: 65  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRDTKKAGTC 124

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTL GHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH
Sbjct: 125 FSFGSGTLHGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 184

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLTA+HS
Sbjct: 185 QSTNAVKKYLTATHS 199

[Close]

BLAST of HG10016325 vs. ExPASy Swiss-Prot
Match: Q8GXB1 (UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.9e-48
Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    
Sbjct: 73  KALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYVDESRKSRKGPAH 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA 
Sbjct: 133 FGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGYPYVKLRQKHFAR 192

Query: 122 QSTNAVKKYLTAS 135
            S+ AV K++ AS
Sbjct: 193 HSSEAVLKHVNAS 205

[Close]

BLAST of HG10016325 vs. ExPASy Swiss-Prot
Match: Q86JL6 (UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = 0


Query: 8   RHFGLNWA-FVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGS 67
           +HF L+W  F   +TP+  G    + +K+   W++   +I Y+ +  D       F +  
Sbjct: 77  KHFDLDWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLYDG-DQEDGSIKFGYSY 136

Query: 68  GTLQGHLLAGEERFSIE-------MDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYF 127
           GTL+ H+  GEERF IE             V+YE+LSFS+P++ LS L YP     Q  F
Sbjct: 137 GTLKDHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYWLSQLGYPVTRYFQNKF 196

Query: 128 AHQSTNAVKK 130
              S N + K
Sbjct: 197 VVDSCNQMLK 205

[Close]

BLAST of HG10016325 vs. ExPASy Swiss-Prot
Match: Q9RST8 (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 35/109 (32.11%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 18  DSSTPV-RSGVKFCVCAKEFLPW--------VVMPLQIVYVNENKDTNKARTCFSFGSGT 77
           ++STP+ R G    +  + F PW         +M  +++Y+ +  D       + FG GT
Sbjct: 80  EASTPLSRQGATVVLLVRHFGPWGRRKWGLYSLMTNRVLYLVDEPDR------YGFGYGT 139

Query: 78  LQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQK 118
           L GHL+ GEERF +E D+   VW+++ +FS+ A   S  + P V   Q+
Sbjct: 140 LPGHLVRGEERFLLERDAGGAVWFDLTTFSRAALPFSRFAQPLVGAAQR 182

[Close]

BLAST of HG10016325 vs. ExPASy TrEMBL
Match: A0A0A0KKV8 (DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.6e-67
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DTNK RTC
Sbjct: 74  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRDTNKGRTC 133

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPY+ILRQKYFAH
Sbjct: 134 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYIILRQKYFAH 193

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLT +HS
Sbjct: 194 QSTNAVKKYLTPTHS 208

[Close]

BLAST of HG10016325 vs. ExPASy TrEMBL
Match: A0A6J1GGC4 (UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.5e-66
Identity = 124/135 (91.85%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTC
Sbjct: 73  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYVNENRGTNMARTC 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFA+
Sbjct: 133 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAY 192

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLTA HS
Sbjct: 193 QSTNAVKKYLTAKHS 207

[Close]

BLAST of HG10016325 vs. ExPASy TrEMBL
Match: A0A6J1IMP9 (UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.2e-66
Identity = 123/135 (91.11%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTC
Sbjct: 73  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYVNENRGTNMARTC 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPY+ILRQKYFA+
Sbjct: 133 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYIILRQKYFAY 192

Query: 122 QSTNAVKKYLTASHS 137
           QSTNAVKKYLTA HS
Sbjct: 193 QSTNAVKKYLTAKHS 207

[Close]

BLAST of HG10016325 vs. ExPASy TrEMBL
Match: A0A1S3B2T0 (UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65
Identity = 121/135 (89.63%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN++TNK RTC
Sbjct: 73  KALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRNTNKGRTC 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILS SKPAHILSFLSYPYVILRQKYFAH
Sbjct: 133 FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSYPYVILRQKYFAH 192

Query: 122 QSTNAVKKYLTASHS 137
           QSTNA KKYLT +HS
Sbjct: 193 QSTNAFKKYLTPTHS 207

[Close]

BLAST of HG10016325 vs. ExPASy TrEMBL
Match: A0A6J1CKD3 (UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.7e-63
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N RHFGLNWAFVDSSTPV  GVKFCVC+KEFLPWVVMPLQIVYVNEN+D   ARTC
Sbjct: 73  KALQNWRHFGLNWAFVDSSTPVNPGVKFCVCSKEFLPWVVMPLQIVYVNENRDAKMARTC 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           FSFGSGTLQGHLLAGEERFSIEMD N+QVWYEILSFSKPAHILSF+SYPYVILRQKYFAH
Sbjct: 133 FSFGSGTLQGHLLAGEERFSIEMDKNNQVWYEILSFSKPAHILSFISYPYVILRQKYFAH 192

Query: 122 QSTNAVKKYLTAS 135
           QS+NAVKKY TAS
Sbjct: 193 QSSNAVKKYSTAS 205

[Close]

BLAST of HG10016325 vs. TAIR 10
Match: AT2G17695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 2.1e-49
Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    
Sbjct: 73  KALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYVDESRKSRKGPAH 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA 
Sbjct: 133 FGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGYPYVKLRQKHFAR 192

Query: 122 QSTNAVKKYLTAS 135
            S+ AV K++ AS
Sbjct: 193 HSSEAVLKHVNAS 205

[Close]

BLAST of HG10016325 vs. TAIR 10
Match: AT2G17695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 2.1e-49
Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    
Sbjct: 73  KALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYVDESRKSRKGPAH 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA 
Sbjct: 133 FGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGYPYVKLRQKHFAR 192

Query: 122 QSTNAVKKYLTAS 135
            S+ AV K++ AS
Sbjct: 193 HSSEAVLKHVNAS 205

[Close]

BLAST of HG10016325 vs. TAIR 10
Match: AT2G17695.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). )

HSP 1 Score: 192.6 bits (488), Expect = 2.1e-49
Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 2   KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTC 61
           K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    
Sbjct: 73  KALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYVDESRKSRKGPAH 132

Query: 62  FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYVILRQKYFAH 121
           F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA 
Sbjct: 133 FGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGYPYVKLRQKHFAR 192

Query: 122 QSTNAVKKYLTAS 135
            S+ AV K++ AS
Sbjct: 193 HSSEAVLKHVNAS 205

The following BLAST results are available for this feature:

BLAST of HG10016325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134836.1	1.8e-66	91.11	UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical ...	[more]
XP_031742966.1	1.8e-66	91.11	UPF0548 protein At2g17695 isoform X2 [Cucumis sativus]	[more]
XP_022950650.1	1.1e-65	91.85	UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein A...	[more]
KAG7034054.1	1.1e-65	91.85	UPF0548 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038883223.1	1.5e-65	91.11	UPF0548 protein At2g17695 isoform X3 [Benincasa hispida]	[more]

BLAST of HG10016325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXB1	2.9e-48	63.91	UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1	[more]
Q86JL6	1.9e-10	33.08	UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1	[more]
Q9RST8	1.3e-08	32.11	UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053...	[more]

BLAST of HG10016325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKV8	8.6e-67	91.11	DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=...	[more]
A0A6J1GGC4	5.5e-66	91.85	UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=...	[more]
A0A6J1IMP9	7.2e-66	91.11	UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1	[more]
A0A1S3B2T0	4.7e-65	89.63	UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1	[more]
A0A6J1CKD3	5.7e-63	87.97	UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV...	[more]

BLAST of HG10016325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17695.1	2.1e-49	63.91	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.2	2.1e-49	63.91	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.3	2.1e-49	63.91	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018960	Domain of unknown function DUF1990	PFAM	PF09348	DUF1990	coord: 6..125 e-value: 3.3E-32 score: 111.7
None	No IPR available	PANTHER	PTHR34202:SF1	UPF0548 PROTEIN	coord: 8..134
None	No IPR available	PANTHER	PTHR34202	UPF0548 PROTEIN	coord: 8..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016325.1	HG10016325.1	mRNA