HG10016311 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016311
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	endochitinase-like
Location	Chr03: 4135002 .. 4135938 (-)
RNA-Seq Expression	HG10016311
Synteny	HG10016311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTAATTTATGCATTCATCTTCTCATGTTTTGCTTTGTTATTGTTGGGAGGCTCTGCTGAGCAATGTGGGTGGCAGGCCGGCGGTGCTGTTTGCCCAAACGGGCTGTGTTGCAGTCAATTTGGGTGGTGCGGCACCGCCGATGCCTACTGTGGAGCAGGCTGCCAAAGCCGATGTCGTCGTTCAAACCCCACTCCGACGCCTTCCCGTGGCGGAGGTGACATCGGTAGGCTAATCAGCCCGAACACTTTCAACCAAATGCTTAAGTATAGTAAGGATCCAAGATGTCCTAGTAATGGATTCTATAGTTACGATGCTTTTCTTAGTGCTGCTCAATCCTTTAGTGGCTTTGCTACGACTGGAGATGATGCCACTCGTAAAAGGGAGTTGGCAGCTTTCTTCGGCCAAACTTCTCACGAACTAACGGTTGGTTTACTAGATAAACATGGAGTTTTATCGATATCTCTTATAAAGATTTTTATTTTTATTTTTTCTTTTGATTAAATACTAAATCTTTGAATTTAATGACTTTGATATCATATTTGATAAACATGGATTTCACTTTACCAATCATGTCCTTTTAAAATGGTACCTCTTTGGGTTAATCATTCTTGAGTCGATCATTTTTTTTTCTTTTTTGGACTGATACCGGTTTGAATTTCATGGACTATGATAAACATAGGTTTCATTTCAAAATGGATCATATTCTCTTAAGATTGTGTTTATTTGGATTCATCGTTCTTAAGTTAGATCTCAAAAATGATAGATAACATATGGTACATGAGGATGGGCAACTGCACCTGATGGTCAATATGCATGGGGATATTATTTCATAAGAGAACAAAATCGTGATACTTACTGCTCACCTAGCTCACAATGGCCTTGTTCTCCTGGCCAGCAATATTACGGACGTGGACCCATCCAAATCTCTTAG

mRNA sequence

ATGAACGTAATTTATGCATTCATCTTCTCATGTTTTGCTTTGTTATTGTTGGGAGGCTCTGCTGAGCAATGTGGGTGGCAGGCCGGCGGTGCTGTTTGCCCAAACGGGCTGTGTTGCAGTCAATTTGGGTGGTGCGGCACCGCCGATGCCTACTGTGGAGCAGGCTGCCAAAGCCGATGTCGTCGTTCAAACCCCACTCCGACGCCTTCCCGTGGCGGAGGTGACATCGGTAGGCTAATCAGCCCGAACACTTTCAACCAAATGCTTAAGTATAGTAAGGATCCAAGATGTCCTAGTAATGGATTCTATAGTTACGATGCTTTTCTTAGTGCTGCTCAATCCTTTAGTGGCTTTGCTACGACTGGAGATGATGCCACTCGTAAAAGGGAGTTGGCAGCTTTCTTCGGCCAAACTTCTCACGAACTAACGGTTGGATGGGCAACTGCACCTGATGGTCAATATGCATGGGGATATTATTTCATAAGAGAACAAAATCGTGATACTTACTGCTCACCTAGCTCACAATGGCCTTGTTCTCCTGGCCAGCAATATTACGGACGTGGACCCATCCAAATCTCTTAG

Coding sequence (CDS)

ATGAACGTAATTTATGCATTCATCTTCTCATGTTTTGCTTTGTTATTGTTGGGAGGCTCTGCTGAGCAATGTGGGTGGCAGGCCGGCGGTGCTGTTTGCCCAAACGGGCTGTGTTGCAGTCAATTTGGGTGGTGCGGCACCGCCGATGCCTACTGTGGAGCAGGCTGCCAAAGCCGATGTCGTCGTTCAAACCCCACTCCGACGCCTTCCCGTGGCGGAGGTGACATCGGTAGGCTAATCAGCCCGAACACTTTCAACCAAATGCTTAAGTATAGTAAGGATCCAAGATGTCCTAGTAATGGATTCTATAGTTACGATGCTTTTCTTAGTGCTGCTCAATCCTTTAGTGGCTTTGCTACGACTGGAGATGATGCCACTCGTAAAAGGGAGTTGGCAGCTTTCTTCGGCCAAACTTCTCACGAACTAACGGTTGGATGGGCAACTGCACCTGATGGTCAATATGCATGGGGATATTATTTCATAAGAGAACAAAATCGTGATACTTACTGCTCACCTAGCTCACAATGGCCTTGTTCTCCTGGCCAGCAATATTACGGACGTGGACCCATCCAAATCTCTTAG

Protein sequence

MNVIYAFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSNPTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQYYGRGPIQIS

Homology

[Close]

BLAST of HG10016311 vs. NCBI nr
Match: XP_038882616.1 (LOW QUALITY PROTEIN: endochitinase A-like [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 163/198 (82.32%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 1   MNVIYA-FIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSR 60
           M  IYA  IF  FALLLLGGSAEQCG  AGGAVCP GLCCSQFGWCGT+DAYCG GCQSR
Sbjct: 1   MKKIYALLIFLSFALLLLGGSAEQCGRXAGGAVCPIGLCCSQFGWCGTSDAYCGPGCQSR 60

Query: 61  CRRSNPT----PTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSF 120
           CRR+NPT    PTP+RGGGDI RLI+   FNQMLKYS DPRCPSNGFYSYDAFL+AAQ F
Sbjct: 61  CRRTNPTPMPKPTPTRGGGDISRLINREAFNQMLKYSNDPRCPSNGFYSYDAFLNAAQFF 120

Query: 121 SGFATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQ 180
           SGFATTGDDATRKRELAAFFGQTSHE + GW TAPDG YAWGY FIRE NR+ YCSPSSQ
Sbjct: 121 SGFATTGDDATRKRELAAFFGQTSHETSGGWPTAPDGPYAWGYCFIRELNRNGYCSPSSQ 180

Query: 181 WPCSPGQQYYGRGPIQIS 194
           WPC+PGQQYYGRGPIQIS
Sbjct: 181 WPCAPGQQYYGRGPIQIS 198

[Close]

BLAST of HG10016311 vs. NCBI nr
Match: XP_022949793.1 (endochitinase-like [Cucurbita moschata])

HSP 1 Score: 325.1 bits (832), Expect = 4.1e-85
Identity = 154/189 (81.48%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 5   YAFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSN 64
           YA IF  F LLLLG SAEQCG QA GAVCPNGLCCSQFGWCGT  AYCG GCQSRCRRSN
Sbjct: 4   YALIFLLFPLLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRSN 63

Query: 65  PTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDD 124
           PTP+P+  GG+I RLIS  TF+QMLKY  DPRCPSNGFYSYDAFL+AA+SFSGFATTGDD
Sbjct: 64  PTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGDD 123

Query: 125 ATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQY 184
           ATRKRELAAFFGQTSHE T GW TAPDG YAWGY  IRE NR TYCSPSSQWPC+ GQQY
Sbjct: 124 ATRKRELAAFFGQTSHETTGGWPTAPDGPYAWGYCQIREINRGTYCSPSSQWPCAAGQQY 183

Query: 185 YGRGPIQIS 194
           Y RGPIQI+
Sbjct: 184 YERGPIQIT 192

[Close]

BLAST of HG10016311 vs. NCBI nr
Match: XP_023544981.1 (endochitinase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 9.2e-85
Identity = 154/190 (81.05%), Postives = 163/190 (85.79%), Query Frame = 0


Query: 5   YAFIFSCF-ALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IF  F  LLLLG SAEQCG QAGG VCPNGLCCSQFGWCGT  AYCG GCQSRCRRS
Sbjct: 4   YALIFLLFPLLLLLGASAEQCGRQAGGVVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRS 63

Query: 65  NPTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGD 124
           NPTP+P+  GG++ RLIS  TF+QMLKY  DPRCPSNGFYSYDAFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNVARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQ 184
           DATRKRELAAFFGQTSHE T GW TAPDG YAWGY  IRE NR TYCSPSSQWPC+ GQQ
Sbjct: 124 DATRKRELAAFFGQTSHETTGGWPTAPDGPYAWGYCQIREINRGTYCSPSSQWPCAAGQQ 183

Query: 185 YYGRGPIQIS 194
           YYGRGPIQI+
Sbjct: 184 YYGRGPIQIT 193

[Close]

BLAST of HG10016311 vs. NCBI nr
Match: KAG6603866.1 (hypothetical protein SDJN03_04475, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 155/190 (81.58%), Postives = 163/190 (85.79%), Query Frame = 0


Query: 5   YAFIFSCF-ALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IF  F  LLLLG SAEQCG QA GAVCPNGLCCSQFGWCGT  AYCG GCQSRCRRS
Sbjct: 4   YALIFLLFPLLLLLGTSAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRS 63

Query: 65  NPTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGD 124
           NPTP+P+  GG+I RLIS  TF+QMLKY  DPRCPSNGFYSYDAFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQ 184
           DATRKRELAAFFGQTSHE T GW TAPDG YAWGY  IRE NR TYCSPSSQWPC+ GQQ
Sbjct: 124 DATRKRELAAFFGQTSHETTGGWPTAPDGPYAWGYCQIREINRGTYCSPSSQWPCAAGQQ 183

Query: 185 YYGRGPIQIS 194
           YYGRGPIQI+
Sbjct: 184 YYGRGPIQIT 193

[Close]

BLAST of HG10016311 vs. NCBI nr
Match: XP_008440903.1 (PREDICTED: endochitinase-like [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 152/196 (77.55%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 2   NVIYAFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCR 61
           NV    IF  FALLL GGSAEQCGWQAGGAVCPNGLCCSQ+GWCGT +AYCGAGCQS+CR
Sbjct: 8   NVYAIIIFLSFALLLFGGSAEQCGWQAGGAVCPNGLCCSQYGWCGTVNAYCGAGCQSQCR 67

Query: 62  RSNPTPTPSRGGGD----IGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSG 121
           R + TP P RGGG     IGRLI  +TFNQM KYS DPRCPSNGFYSY AFL+AAQSF+G
Sbjct: 68  RRS-TPAPIRGGGGGGGYIGRLIREDTFNQMFKYSNDPRCPSNGFYSYRAFLTAAQSFNG 127

Query: 122 FATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWP 181
           FATTGD+ATRKRELAAFFGQTS E T GWATAPDG YAWGY F+R+Q + TYCSPS  WP
Sbjct: 128 FATTGDEATRKRELAAFFGQTSQETTGGWATAPDGPYAWGYCFVRQQYQSTYCSPSWDWP 187

Query: 182 CSPGQQYYGRGPIQIS 194
           C+ GQQYYGRGPIQIS
Sbjct: 188 CASGQQYYGRGPIQIS 202

[Close]

BLAST of HG10016311 vs. ExPASy Swiss-Prot
Match: P36907 (Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.7e-70
Identity = 124/191 (64.92%), Postives = 150/191 (78.53%), Query Frame = 0


Query: 6   AFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS-N 65
           +F   C   L LG  AEQCG QAGGAVCPNGLCCS+FG+CG+ D YCG GCQS+C+ S  
Sbjct: 8   SFFILCLLPLFLGSKAEQCGSQAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKSSPT 67

Query: 66  PT-PTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGD 125
           PT PTPS GGGD+GRL+  + F+QMLKY  D RC  +GFY+YDAF++AA+SF+GF TTGD
Sbjct: 68  PTIPTPSTGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGD 127

Query: 126 DATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQN-RDTYCSPSSQWPCSPGQ 185
           D T+K+ELAAF  QTSHE T GW TAPDG YAWGY F+ EQN ++ YCSP   WPC+PG+
Sbjct: 128 DNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP-KDWPCAPGK 187

Query: 186 QYYGRGPIQIS 194
           +YYGRGPIQ++
Sbjct: 188 KYYGRGPIQLT 197

[Close]

BLAST of HG10016311 vs. ExPASy Swiss-Prot
Match: P06215 (Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-66
Identity = 118/181 (65.19%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 14  LLLLGGS-AEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSNPTPTPSRG 73
           LLL+GGS  EQCG QAGGA+CP G CCSQFGWCG+   YCG GCQS+C   +P PT    
Sbjct: 19  LLLVGGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCGGPSPAPT---- 78

Query: 74  GGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDATRKRELA 133
             D+  LIS +TF+QMLK+  D  CP+ GFY+YDAF++AA+++  F  TGD ATRKRE+A
Sbjct: 79  --DLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIA 138

Query: 134 AFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQYYGRGPIQI 193
           AF GQTSHE T GWATAPDG YAWGY F+RE+N  TYCS + Q+PC+PGQQYYGRGPIQI
Sbjct: 139 AFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQI 193

[Close]

BLAST of HG10016311 vs. ExPASy Swiss-Prot
Match: P08252 (Endochitinase A OS=Nicotiana tabacum OX=4097 GN=CHN48 PE=1 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 7.6e-66
Identity = 120/186 (64.52%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 12  FALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAG-CQSRCRRSNPTPTPS 71
           F+LLLL  SAEQCG QAGGA CP+GLCCS+FGWCG  + YCG G CQS+C    PTPTP 
Sbjct: 14  FSLLLLSASAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQC-PGGPTPTPP 73

Query: 72  R--GGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDATRK 131
              GGGD+G +IS + F+QMLK+  D  C   GFYSY+AF++AA+SF GF T+GD   RK
Sbjct: 74  TPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARK 133

Query: 132 RELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQ-NRDTYCSPSSQWPCSPGQQYYGR 191
           RE+AAFF QTSHE T GWATAPDG YAWGY ++REQ +   YC+PS QWPC+PG++Y+GR
Sbjct: 134 REIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGR 193

Query: 192 GPIQIS 194
           GPIQIS
Sbjct: 194 GPIQIS 198

[Close]

BLAST of HG10016311 vs. ExPASy Swiss-Prot
Match: P36361 (Endochitinase CH5B OS=Phaseolus vulgaris OX=3885 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-64
Identity = 114/181 (62.98%), Postives = 138/181 (76.24%), Query Frame = 0


Query: 14  LLLLGGS-AEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSNPTPTPSRG 73
           +LL+GGS  EQCG QAGGA+CP G CCSQFGWCG+   YCG  CQS+C   +P PT    
Sbjct: 18  MLLVGGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCGGPSPAPT---- 77

Query: 74  GGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDATRKRELA 133
             D+  LIS +TF+Q+LK+  D  CP+ GFY+YDAF++AA+++  F  TGD ATRKRE+A
Sbjct: 78  --DLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIA 137

Query: 134 AFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQYYGRGPIQI 193
           AF GQTSHE T GWATAPDG YAWGY F+RE+N   YCS + Q+PC+PGQQYYGRGPIQI
Sbjct: 138 AFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQI 192

[Close]

BLAST of HG10016311 vs. ExPASy Swiss-Prot
Match: Q09023 (Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.1e-64
Identity = 115/188 (61.17%), Postives = 142/188 (75.53%), Query Frame = 0


Query: 8   IFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYC-GAGCQSRCRRSNPT 67
           +F  F+ LL    AEQCG QAGGA+CPNGLCCS+FGWCG  +AYC   GCQS+C  + P 
Sbjct: 7   LFLIFSFLLSFSLAEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQCGGTPPG 66

Query: 68  PTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDAT 127
           PT     GD+  +IS + F+ MLK+  D  CP+ GFY+YDAF++AA+SF GF TTGD AT
Sbjct: 67  PT-----GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTAT 126

Query: 128 RKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQN-RDTYCSPSSQWPCSPGQQYY 187
           RK+E+AAFFGQTSHE T GWATAPDG Y+WGY F +EQN    YCSPS++WPC+ G+ YY
Sbjct: 127 RKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYY 186

Query: 188 GRGPIQIS 194
           GRGP+Q+S
Sbjct: 187 GRGPMQLS 189

[Close]

BLAST of HG10016311 vs. ExPASy TrEMBL
Match: A0A6J1GD36 (endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111453083 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.0e-85
Identity = 154/189 (81.48%), Postives = 162/189 (85.71%), Query Frame = 0


Query: 5   YAFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRSN 64
           YA IF  F LLLLG SAEQCG QA GAVCPNGLCCSQFGWCGT  AYCG GCQSRCRRSN
Sbjct: 4   YALIFLLFPLLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRRSN 63

Query: 65  PTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDD 124
           PTP+P+  GG+I RLIS  TF+QMLKY  DPRCPSNGFYSYDAFL+AA+SFSGFATTGDD
Sbjct: 64  PTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGDD 123

Query: 125 ATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQY 184
           ATRKRELAAFFGQTSHE T GW TAPDG YAWGY  IRE NR TYCSPSSQWPC+ GQQY
Sbjct: 124 ATRKRELAAFFGQTSHETTGGWPTAPDGPYAWGYCQIREINRGTYCSPSSQWPCAAGQQY 183

Query: 185 YGRGPIQIS 194
           Y RGPIQI+
Sbjct: 184 YERGPIQIT 192

[Close]

BLAST of HG10016311 vs. ExPASy TrEMBL
Match: A0A5D3CKZ6 (Endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00690 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 152/196 (77.55%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 2   NVIYAFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCR 61
           NV    IF  FALLL GGSAEQCGWQAGGAVCPNGLCCSQ+GWCGT +AYCGAGCQS+CR
Sbjct: 3   NVYAIIIFLSFALLLFGGSAEQCGWQAGGAVCPNGLCCSQYGWCGTVNAYCGAGCQSQCR 62

Query: 62  RSNPTPTPSRGGGD----IGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSG 121
           R + TP P RGGG     IGRLI  +TFNQM KYS DPRCPSNGFYSY AFL+AAQSF+G
Sbjct: 63  RRS-TPAPIRGGGGGGGYIGRLIREDTFNQMFKYSNDPRCPSNGFYSYRAFLTAAQSFNG 122

Query: 122 FATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWP 181
           FATTGD+ATRKRELAAFFGQTS E T GWATAPDG YAWGY F+R+Q + TYCSPS  WP
Sbjct: 123 FATTGDEATRKRELAAFFGQTSQETTGGWATAPDGPYAWGYCFVRQQYQSTYCSPSWDWP 182

Query: 182 CSPGQQYYGRGPIQIS 194
           C+ GQQYYGRGPIQIS
Sbjct: 183 CASGQQYYGRGPIQIS 197

[Close]

BLAST of HG10016311 vs. ExPASy TrEMBL
Match: A0A1S3B272 (endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103485185 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 152/196 (77.55%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 2   NVIYAFIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCR 61
           NV    IF  FALLL GGSAEQCGWQAGGAVCPNGLCCSQ+GWCGT +AYCGAGCQS+CR
Sbjct: 8   NVYAIIIFLSFALLLFGGSAEQCGWQAGGAVCPNGLCCSQYGWCGTVNAYCGAGCQSQCR 67

Query: 62  RSNPTPTPSRGGGD----IGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSG 121
           R + TP P RGGG     IGRLI  +TFNQM KYS DPRCPSNGFYSY AFL+AAQSF+G
Sbjct: 68  RRS-TPAPIRGGGGGGGYIGRLIREDTFNQMFKYSNDPRCPSNGFYSYRAFLTAAQSFNG 127

Query: 122 FATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWP 181
           FATTGD+ATRKRELAAFFGQTS E T GWATAPDG YAWGY F+R+Q + TYCSPS  WP
Sbjct: 128 FATTGDEATRKRELAAFFGQTSQETTGGWATAPDGPYAWGYCFVRQQYQSTYCSPSWDWP 187

Query: 182 CSPGQQYYGRGPIQIS 194
           C+ GQQYYGRGPIQIS
Sbjct: 188 CASGQQYYGRGPIQIS 202

[Close]

BLAST of HG10016311 vs. ExPASy TrEMBL
Match: A0A6J1IR09 (endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111477666 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 152/190 (80.00%), Postives = 160/190 (84.21%), Query Frame = 0


Query: 5   YAFIFSCFAL-LLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 64
           YA IF  F L LLLG SAEQCG QA GAVCPNGLCCSQFGWCGT  AYCG GCQSRCR S
Sbjct: 4   YALIFLLFPLSLLLGASAEQCGRQASGAVCPNGLCCSQFGWCGTTRAYCGHGCQSRCRYS 63

Query: 65  NPTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGD 124
           NPTP+P+  GG+I RLIS  TF+QMLKY  DPRCPSNGFYSYDAFL+AA+SFSGFATTGD
Sbjct: 64  NPTPSPNGSGGNIARLISSATFDQMLKYRNDPRCPSNGFYSYDAFLAAARSFSGFATTGD 123

Query: 125 DATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCSPGQQ 184
           DAT KRELAAF GQTSHE T GW TAPDG YAWGY  IRE NR TYCSPSSQWPC+ GQQ
Sbjct: 124 DATCKRELAAFLGQTSHETTGGWPTAPDGPYAWGYCQIREINRGTYCSPSSQWPCAAGQQ 183

Query: 185 YYGRGPIQIS 194
           YYGRGPIQI+
Sbjct: 184 YYGRGPIQIT 193

[Close]

BLAST of HG10016311 vs. ExPASy TrEMBL
Match: A0A0A0KJL2 (Chitin-binding type-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G509040 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.8e-77
Identity = 141/194 (72.68%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 2   NVIYAFIF-SCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRC 61
           N +YA IF S FALLL GGSAEQCGWQAGGAVCPNGLCCSQ+GWCGT  AYC  GCQS+C
Sbjct: 8   NNVYAIIFLSNFALLLFGGSAEQCGWQAGGAVCPNGLCCSQYGWCGTVKAYCAEGCQSQC 67

Query: 62  -RRSNPTPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFA 121
            RRSNPTP    GGG IG LIS +TFNQM K+  +P C +NG Y+Y AFL+AAQSF+GFA
Sbjct: 68  RRRSNPTPIRGGGGGYIGGLISEDTFNQMFKHRNEPDCQNNGIYNYRAFLNAAQSFNGFA 127

Query: 122 TTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSSQWPCS 181
           TTGD++TRKRELAAFFGQTS E T GW TAPDG YAWGY F R+ +R +YCSPS  WPC+
Sbjct: 128 TTGDESTRKRELAAFFGQTSKETTGGWETAPDGPYAWGYCFARQIDRSSYCSPSWDWPCA 187

Query: 182 PGQQYYGRGPIQIS 194
           P QQYYGRGP+QIS
Sbjct: 188 PNQQYYGRGPMQIS 201

[Close]

BLAST of HG10016311 vs. TAIR 10
Match: AT3G12500.1 (basic chitinase )

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-64
Identity = 115/189 (60.85%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 7   FIFSCFALLLLGGSAEQCGWQAGGAVCPNGLCCSQFGWCGTADAYC-GAGCQSRCRRSNP 66
           F+F  F+LLL   SAEQCG QAGGA+CPNGLCCS+FGWCG  + YC   GCQS+C    P
Sbjct: 19  FLFLIFSLLLSLSSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQC---TP 78

Query: 67  TPTPSRGGGDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDA 126
             TP    GD+  +IS + F+ MLK+  D  CP+ GFY+Y+AF++AA+SF GF TTGD A
Sbjct: 79  GGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTA 138

Query: 127 TRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQN-RDTYCSPSSQWPCSPGQQY 186
           TRK+E+AAFFGQTSHE T GWATAPDG Y+WGY F +EQN    YC PS+ WPC+ G++Y
Sbjct: 139 TRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRY 198

Query: 187 YGRGPIQIS 194
           YGRGP+Q+S
Sbjct: 199 YGRGPMQLS 204

[Close]

BLAST of HG10016311 vs. TAIR 10
Match: AT2G43610.1 (Chitinase family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 77/199 (38.69%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 6   AFIFSCFALLLLGGSA--EQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 65
           A I   F L ++ G+A  + CG       C   +CCS++G+CGT  AYCG GCQS    S
Sbjct: 11  ALIIFLFTLTIMTGTAFSQNCGTNG----CKGNMCCSRWGYCGTTKAYCGTGCQSGPCNS 70

Query: 66  NPTPTPSRGG---------GDIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQS 125
            P PTP+  G         G I  +I+P  FN ++       CP+ GFY+  AF++AA+S
Sbjct: 71  KPKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIMS-KVGSGCPAKGFYTRQAFIAAAES 130

Query: 126 FSGFATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSPSS 185
           F+ +  T      KRE+AA   Q SHE             +  + +  E  R  YCSPS+
Sbjct: 131 FAAYKGT----VAKREIAAMLAQFSHE-------------SGSFCYKEEIARGRYCSPST 187

Query: 186 QWPCSPGQQYYGRGPIQIS 194
            +PC PG+ YYGRGPIQI+
Sbjct: 191 TYPCQPGKNYYGRGPIQIT 187

[Close]

BLAST of HG10016311 vs. TAIR 10
Match: AT2G43620.1 (Chitinase family protein )

HSP 1 Score: 125.2 bits (313), Expect = 5.8e-29
Identity = 78/201 (38.81%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 6   AFIFSCFALLLLGGS--AEQCGWQAGGAVCPNGLCCSQFGWCGTADAYCGAGCQSRCRRS 65
           AFI   F L ++  +  ++QCG       C   LCCS++G+CGT DAYCG GC+S    S
Sbjct: 11  AFILFLFTLTIMAKTVFSQQCGTTG----CAANLCCSRYGYCGTTDAYCGTGCRSGPCSS 70

Query: 66  NPT---PTPSRGGG--------DIGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAA 125
           + T   PTPS G G         I  +++P  F+ ++       CP+ GFY+  AF++AA
Sbjct: 71  STTPIPPTPSGGAGGLNADPRDTIENVVTPAFFDGIMS-KVGNGCPAKGFYTRQAFIAAA 130

Query: 126 QSFSGFATTGDDATRKRELAAFFGQTSHELTVGWATAPDGQYAWGYYFIREQNRDTYCSP 185
           QSF  +  T      KRE+AA   Q SHE             +  + +  E  R  YCSP
Sbjct: 131 QSFDAYKGT----VAKREIAAMLAQFSHE-------------SGSFCYKEEIARGKYCSP 189

Query: 186 SSQWPCSPGQQYYGRGPIQIS 194
           S+ +PC+PG+ YYGRGPIQI+
Sbjct: 191 STAYPCTPGKDYYGRGPIQIT 189

[Close]

BLAST of HG10016311 vs. TAIR 10
Match: AT1G02360.1 (Chitinase family protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 76  IGRLISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDATRKRELAAFF 135
           I RL+  + +N++  +  +  CP+NGFY+Y++F+ A + F  F + G   T++ E+AAF 
Sbjct: 30  IERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAFL 89

Query: 136 GQTSHELTVGWATAPDGQYAWGYYFIREQN-RDTYC-SPSSQWPCSPGQQYYGRGPIQIS 194
            Q SHE T GWATAPDG YAWG  F  E + + TYC S  +QWPC P + Y GRGPIQ+S
Sbjct: 90  AQISHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLS 149

[Close]

BLAST of HG10016311 vs. TAIR 10
Match: AT4G01700.1 (Chitinase family protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.4e-27
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 79  LISPNTFNQMLKYSKDPRCPSNGFYSYDAFLSAAQSFSGFATTGDDATRKRELAAFFGQT 138
           L+    ++Q+  +  +  CP+ GFY Y+AF+ A +SF  F + G+  TR+RE+AAF  Q 
Sbjct: 41  LVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFLAQI 100

Query: 139 SHELTVGWATAPDGQYAWGYYFIREQN-RDTYCSPSSQ-WPCSPGQQYYGRGPIQIS 194
           SHE T GWATAPDG YAWG  F  E + +  YC  S++ WPC  G+ Y GRGPIQ+S
Sbjct: 101 SHETTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLS 157

The following BLAST results are available for this feature:

BLAST of HG10016311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882616.1	1.0e-88	82.32	LOW QUALITY PROTEIN: endochitinase A-like [Benincasa hispida]	[more]
XP_022949793.1	4.1e-85	81.48	endochitinase-like [Cucurbita moschata]	[more]
XP_023544981.1	9.2e-85	81.05	endochitinase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603866.1	2.0e-84	81.58	hypothetical protein SDJN03_04475, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008440903.1	2.9e-83	77.55	PREDICTED: endochitinase-like [Cucumis melo]	[more]

BLAST of HG10016311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36907	1.7e-70	64.92	Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P06215	1.5e-66	65.19	Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1	[more]
P08252	7.6e-66	64.52	Endochitinase A OS=Nicotiana tabacum OX=4097 GN=CHN48 PE=1 SV=2	[more]
P36361	1.9e-64	62.98	Endochitinase CH5B OS=Phaseolus vulgaris OX=3885 PE=3 SV=1	[more]
Q09023	7.1e-64	61.17	Endochitinase CH25 OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of HG10016311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD36	2.0e-85	81.48	endochitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111453083 PE=4 SV=1	[more]
A0A5D3CKZ6	1.4e-83	77.55	Endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0...	[more]
A0A1S3B272	1.4e-83	77.55	endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103485185 PE=4 SV=1	[more]
A0A6J1IR09	1.6e-82	80.00	endochitinase-like OS=Cucurbita maxima OX=3661 GN=LOC111477666 PE=4 SV=1	[more]
A0A0A0KJL2	5.8e-77	72.68	Chitin-binding type-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Cs...	[more]

BLAST of HG10016311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12500.1	1.5e-64	60.85	basic chitinase	[more]
AT2G43610.1	1.8e-30	38.69	Chitinase family protein	[more]
AT2G43620.1	5.8e-29	38.81	Chitinase family protein	[more]
AT1G02360.1	1.3e-28	47.50	Chitinase family protein	[more]
AT4G01700.1	5.4e-27	47.86	Chitinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001002	Chitin-binding, type 1	PRINTS	PR00451	CHITINBINDNG	coord: 46..53 score: 56.0 coord: 31..39 score: 65.93 coord: 39..46 score: 80.67
IPR001002	Chitin-binding, type 1	SMART	SM00270	ChitinBD_3	coord: 23..60 e-value: 1.6E-16 score: 70.9
IPR001002	Chitin-binding, type 1	PFAM	PF00187	Chitin_bind_1	coord: 23..60 e-value: 3.5E-14 score: 53.0
IPR001002	Chitin-binding, type 1	PROSITE	PS50941	CHIT_BIND_I_2	coord: 21..62 score: 10.88086
IPR000726	Glycoside hydrolase, family 19, catalytic	PFAM	PF00182	Glyco_hydro_19	coord: 79..193 e-value: 1.7E-50 score: 172.0
IPR000726	Glycoside hydrolase, family 19, catalytic	PROSITE	PS00773	CHITINASE_19_1	coord: 97..119
IPR016283	Glycoside hydrolase, family 19	PIRSF	PIRSF001060	Endochitinase	coord: 1..193 e-value: 4.1E-61 score: 204.9
IPR036861	Endochitinase-like superfamily	GENE3D	3.30.60.10		coord: 21..63 e-value: 4.7E-18 score: 67.0
IPR036861	Endochitinase-like superfamily	SUPERFAMILY	57016	Plant lectins/antimicrobial peptides	coord: 23..69
None	No IPR available	GENE3D	1.10.530.10		coord: 79..161 e-value: 1.0E-47 score: 164.6
None	No IPR available	GENE3D	3.30.20.10	Endochitinase, domain 2	coord: 162..193 e-value: 1.0E-47 score: 164.6
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 7..192
None	No IPR available	PANTHER	PTHR22595:SF171	CHITINASE (CLASS IB) / HEVEIN	coord: 7..192
None	No IPR available	CDD	cd00325	chitinase_GH19	coord: 80..193 e-value: 1.77326E-40 score: 135.25
None	No IPR available	CDD	cd06921	ChtBD1_GH19_hevein	coord: 22..60 e-value: 5.22647E-16 score: 66.744
IPR018371	Chitin-binding, type 1, conserved site	PROSITE	PS00026	CHIT_BIND_I_1	coord: 33..52
IPR023346	Lysozyme-like domain superfamily	SUPERFAMILY	53955	Lysozyme-like	coord: 75..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016311.1	HG10016311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0006032	chitin catabolic process
biological_process	GO:0006952	defense response
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0008061	chitin binding