HG10016202 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016202
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	peroxisomal membrane protein PMP22
Location	Chr03: 3481390 .. 3484024 (+)
RNA-Seq Expression	HG10016202
Synteny	HG10016202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTTTAGCCAAGAAGGGATTAGACAAGTATCTTTCCCAACTTTACCAGCACCCTTTGAGAACCAAGGTGATTTTTCCCTCTTTTTGAATGTCTCTTTATGATGGGTCTTCTCGATTTACCTTTGTTTTCCCCTTTCATTTATACTGGGATGTTTCGCTACTTGAAAATTGTAAGCTTTTAGTTTCCTTCCCCACATTTTTCTATCAGTTCAGTGAGCTTCCAAGTAACGGGCATATTGGGAAGCTGAAAGATACCCCCTTTTTTCTAATCGTTTCATTTTGAAGATCTAAATAGACCAATTACAAGGATGCGGTTTCACCATTTAAGTTATTAGTTATTCGTTGAAAGCACTTAATATCTCGACCGTGAAGTCGGAGTTCAAGCCCCACTCCACACGTTGTTCAACTAAAGAATAATAAACCCTGAATAAATTATTTATTAATACTGAAATCGGTCAACAGCTAAAGTTTAGGGCATTTGGTATTTCAATGACCCATAGTTTTGGATGGGTATGACTTTGTTATTAACTGAAATACTTAACATATTATATTGTCGTTTCAATGACTTGGAATCAGACCTTTTCAGCTTGAGTATATTTGAATTATAGAAAGAAGCAAGTATTGGCTTTGAAACTTTCCTCACTTCCTCCTGTATTTGTTACTTTTGAACTTGAGGACGAGCTAATTTGTTTAAGGAGGGAAATTGAAGTAGTGAGATTTATGGTCTAGTTAGTTTAGTTTTTTCAAATACTTAGTTAGTTGTAACTTGCTCTGTAAATCAACCATCATAGTTTGACTTAGTGGTCAACAATTGTTATAGGTTTAATAAAGGACTTAACAAGGATTTAATATCCTACTGGTTTTCATGGCATCCAAATATTATAGGGTTAGGCGGATTGTCTCGTGAGATTAGTCGATGTTAATCTTTTGTGTTTGTATACTTTGAATCATTGTAAAGTCCTTTGAGTTATAGTTCTTCAAGAATTTTCTCATTGTATTCAAGGCTTAAGCTACACCATTCTAGATGTGGCACTTTTGTTTGATGTGACTTTTTGTTGGACTAGGTGATCACATCTGGAGTATTGATAGCGATAAGCGATGTGGTCTCCCAGAAGCTTATTGGCATACAGAAACTTCAGTTGAAACGAATTTTACTCAAAATGGTATGGTCCTCTCTAGGTTCATTCTGAATACTGAATAGTCAACACATTTGCTGTAAATCTCCTTTCTATAGGAAAACAATTGTGAATGCTTAATCTTTGATAAGGCCATCTTCCATGCTTGTGTGTATTGTTGAAAGAAAACAATGATTCTCGCTCATGATTGGCTCAACGCAGCTTTATGGATGTCTTTACCTTGGACCCTTCGGGCATTATCTGCACCAAATACTAGATAAAATCTTCCAGGGGAAAAGAGACTCAAGAACGGTTGCCAAGAAGGTATATGCTGTCCCCTTCCATTTATTCTTTCATTTGGTTCTCAGAACTGAGGTAATTGGTTTTGAAGTTTTTTATCAACTAGGAGCAGCACCATACTATCGTTAGATCCCATTACATTCCATTGGTAACCTACATTATTGAAATGATCATCCTGATGTGCATTAGTCTGTAGATATCCTTATATCAAGGAGTGAGTACTGTTTCATAGTCATACCATCAAGAAAAACTGTTGTGGTAGTATAGAAAATTTCCCAAGAAAGGTTATCAAATTTCAATTTCTGTTGTATCAACCAATTCGACAGTTACCTTAGTTCATCTGCAATGAACTAAGCGCGATACGAAGGTTGGGATGGGTGGCGAATGGTGGATTTTGTAAGTGAAACAATTTACATTATATATGACTAGTTTGGTTTTGGTTCTCAGGTGATGGTGGAACAATTTACATCCTCTCCTTGGAACCACTTTGTCTTCTTGGTTTATTATGGACTGGTTATTGAAAGTGAGTATAATTTTCGACATATACTTTGCAAAAGCAGCCATGTGAGAAATAAAAGTTAATATTGTGTTAAAACATCTATTTCCCAGACACCATTTATTTATTTCAATAATAGCTGTATATTGATGGTGGGCACATGGGAAAAGGACATAGAAAAAAGGACCATTAAAAAGAAGAAGCTTGAATAAAGCCAATGAACCTTGGTAAACTTTAGCTGCTAAAAATATTGCTTCTGTTGAAGAATTCCCTTTAGCAAAGGTTCTAATCCACGTCCAAACTTTTTACTTAAACCTAAAACTTTGCTTTGAAATGCAGAAAGGACTTGGGTCCAGGTAAAGGCTAAGGTTAGAAAGGAATTTCCTTCAGTCCAGCTAACTGCTTGGATGGTATTTCCCTTTTCCCACTCATCAGCTTTGCTTCATTTTTCAACTGTTTCATTGACTGGTGTGACCACACCAGTACTACTGCACCGAATCCTATTAGAACTCGTTTTCATATTAATAGAACCAATAAACTTTCAGTTCTGGCCATTTGCTTCTTGGATAAATCACCAGTATGTACCACTTCAGTTGCGCGTCATCTTCTATAACCTGGTCGCGTTCTGTTGGTATGCTTACTTCCTTGTTTCATTTCCCCTTGATATATCTAGACTAATGATTAATCGGTCATTCTTTTATAGTCTCTCCAGCTGCTAA

mRNA sequence

ATGGGTTCTTTAGCCAAGAAGGGATTAGACAAGTATCTTTCCCAACTTTACCAGCACCCTTTGAGAACCAAGGTGATCACATCTGGAGTATTGATAGCGATAAGCGATGTGGTCTCCCAGAAGCTTATTGGCATACAGAAACTTCAGTTGAAACGAATTTTACTCAAAATGCTTTATGGATGTCTTTACCTTGGACCCTTCGGGCATTATCTGCACCAAATACTAGATAAAATCTTCCAGGGGAAAAGAGACTCAAGAACGGTTGCCAAGAAGGTATATGCTGTCCCCTTCCATTTATTCTTTCATTTGGTTCTCAGAACTGAGGTGATGGTGGAACAATTTACATCCTCTCCTTGGAACCACTTTGTCTTCTTGGTTTATTATGGACTGGTTATTGAAAAAAGGACTTGGGTCCAGGTAAAGGCTAAGGTTAGAAAGGAATTTCCTTCAGTCCAGCTAACTGCTTGGATGTTCTGGCCATTTGCTTCTTGGATAAATCACCAGTATGTACCACTTCAGTTGCGCGTCATCTTCTATAACCTGGTCGCGTTCTGTTGGTATGCTTACTTCCTTGTTTCATTTCCCCTTGATATATCTAGACTAATGATTAATCGGTCATTCTTTTATAGTCTCTCCAGCTGCTAA

Coding sequence (CDS)

ATGGGTTCTTTAGCCAAGAAGGGATTAGACAAGTATCTTTCCCAACTTTACCAGCACCCTTTGAGAACCAAGGTGATCACATCTGGAGTATTGATAGCGATAAGCGATGTGGTCTCCCAGAAGCTTATTGGCATACAGAAACTTCAGTTGAAACGAATTTTACTCAAAATGCTTTATGGATGTCTTTACCTTGGACCCTTCGGGCATTATCTGCACCAAATACTAGATAAAATCTTCCAGGGGAAAAGAGACTCAAGAACGGTTGCCAAGAAGGTATATGCTGTCCCCTTCCATTTATTCTTTCATTTGGTTCTCAGAACTGAGGTGATGGTGGAACAATTTACATCCTCTCCTTGGAACCACTTTGTCTTCTTGGTTTATTATGGACTGGTTATTGAAAAAAGGACTTGGGTCCAGGTAAAGGCTAAGGTTAGAAAGGAATTTCCTTCAGTCCAGCTAACTGCTTGGATGTTCTGGCCATTTGCTTCTTGGATAAATCACCAGTATGTACCACTTCAGTTGCGCGTCATCTTCTATAACCTGGTCGCGTTCTGTTGGTATGCTTACTTCCTTGTTTCATTTCCCCTTGATATATCTAGACTAATGATTAATCGGTCATTCTTTTATAGTCTCTCCAGCTGCTAA

Protein sequence

MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLVAFCWYAYFLVSFPLDISRLMINRSFFYSLSSC

Homology

[Close]

BLAST of HG10016202 vs. NCBI nr
Match: XP_038882944.1 (peroxisomal membrane protein PMP22-like [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 150/186 (80.65%), Postives = 165/186 (88.71%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           MGSLAKKGLDKYLSQLYQHPLRTK+ITSGVLIAI+DV SQKLIGIQ++QLKRIL+K++YG
Sbjct: 1   MGSLAKKGLDKYLSQLYQHPLRTKIITSGVLIAINDVASQKLIGIQRIQLKRILIKLVYG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
           CLYLGPFGHYLHQILDKIFQGKRDS+TV KK                 V++EQFTSSPWN
Sbjct: 61  CLYLGPFGHYLHQILDKIFQGKRDSKTVVKK-----------------VVLEQFTSSPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           HFVFLVYYGL IE+RTWVQVKAKVRKEFPSVQLTAWMFWPFA+WINHQ+VPLQLR +F+N
Sbjct: 121 HFVFLVYYGLFIERRTWVQVKAKVRKEFPSVQLTAWMFWPFAAWINHQFVPLQLRALFHN 169

Query: 181 LVAFCW 187
           LVAFCW
Sbjct: 181 LVAFCW 169

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BLAST of HG10016202 vs. NCBI nr
Match: XP_008440019.1 (PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 144/186 (77.42%), Postives = 159/186 (85.48%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           MGSLAKKGL+KYLSQL QHPLRTKVITSGVL+A+SDV SQKL GIQKLQLKRILLK+LYG
Sbjct: 1   MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
           CLYLGPF HYLHQILDKIF GKRD++TVAKK                 V +EQ T+SPWN
Sbjct: 61  CLYLGPFSHYLHQILDKIFHGKRDTKTVAKK-----------------VALEQLTASPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           HFVFLVYYGL+IE RTWVQVKAKV+KEFPS+QLTAWMFWPF  WINHQ++PLQLRVIF++
Sbjct: 121 HFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHS 169

Query: 181 LVAFCW 187
           LVAFCW
Sbjct: 181 LVAFCW 169

[Close]

BLAST of HG10016202 vs. NCBI nr
Match: XP_004134772.1 (peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN49094.1 hypothetical protein Csa_004289 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-74
Identity = 141/186 (75.81%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           MGSLAKK L+KYLSQL  HPLRTKVITSGVL+A+SDV SQKL GIQKLQLKRILLK+LYG
Sbjct: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
           CLYLGPF HYLHQILDKIF GKRD++TVAKK                 V +EQ T+SPWN
Sbjct: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKK-----------------VALEQLTASPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           HFVFLVYYGL+IE RTWVQVKAKV+KEFPS+QLTAWMFWPF  WINHQ++PLQ RVIF++
Sbjct: 121 HFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQFRVIFHS 169

Query: 181 LVAFCW 187
           LVAFCW
Sbjct: 181 LVAFCW 169

[Close]

BLAST of HG10016202 vs. NCBI nr
Match: XP_022926895.1 (peroxisomal membrane protein PMP22 isoform X1 [Cucurbita moschata] >KAG6594672.1 Peroxisomal membrane protein PMP22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.1 bits (736), Expect = 6.2e-74
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 3   SLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCL 62
           SLAKK  +KY+SQLYQHPLRTKVITSGVLIAISDV SQKLIGIQKLQL+RILLK+LYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLIAISDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHF 122
           YLGPFGH+LHQIL+KIFQGKRDS+TVAKK                 V+VEQ TSSP +HF
Sbjct: 62  YLGPFGHFLHQILEKIFQGKRDSKTVAKK-----------------VLVEQLTSSPLSHF 121

Query: 123 VFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLV 182
           VFLVYYGL+IE+R WV VKAKV+KEFPSVQLTAWMFWPF  WINHQYVPLQLRVIF++LV
Sbjct: 122 VFLVYYGLIIERRPWVVVKAKVKKEFPSVQLTAWMFWPFVGWINHQYVPLQLRVIFHSLV 168

Query: 183 AFCW 187
           AF W
Sbjct: 182 AFVW 168

[Close]

BLAST of HG10016202 vs. NCBI nr
Match: XP_023003048.1 (peroxisomal membrane protein PMP22 isoform X1 [Cucurbita maxima] >XP_023003049.1 peroxisomal membrane protein PMP22 isoform X1 [Cucurbita maxima])

HSP 1 Score: 287.7 bits (735), Expect = 8.1e-74
Identity = 141/184 (76.63%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 3   SLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCL 62
           SLAKK  +KY+SQLYQHPLRTKVITSGVL+AI+DV SQKLIGIQKLQL+RILLK+LYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLVAINDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHF 122
           YLGPFGH+LHQILDKIFQGKRDS+TVAKK                 V+VEQ TSSP +HF
Sbjct: 62  YLGPFGHFLHQILDKIFQGKRDSKTVAKK-----------------VLVEQLTSSPLSHF 121

Query: 123 VFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLV 182
           VFLVYYGL+IE+R WV VKAKV+KEFPSVQLTAWMFWPF  WINHQY+PLQLRVIF++LV
Sbjct: 122 VFLVYYGLIIERRPWVVVKAKVKKEFPSVQLTAWMFWPFVGWINHQYIPLQLRVIFHSLV 168

Query: 183 AFCW 187
           AF W
Sbjct: 182 AFVW 168

[Close]

BLAST of HG10016202 vs. ExPASy Swiss-Prot
Match: Q9ZS51 (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.5e-51
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = 0


Query: 6   KKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCLYLG 65
           K  L +YLSQL QHPLRTK IT+GVL  +SDVVSQKL GIQK+QL+R+LLK+++   +LG
Sbjct: 8   KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query: 66  PFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHFVFL 125
           P GH+ H  LDK F+GK+D++TVAKK                 V++EQ T SP NH +F+
Sbjct: 68  PAGHFFHTYLDKFFKGKKDTQTVAKK-----------------VILEQLTLSPLNHLLFM 127

Query: 126 VYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLVAFC 185
           +YYG+VIE+  W  V+ +++K +P+VQLTAW F+P   WIN++YVPL  RVI ++LVAF 
Sbjct: 128 IYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFF 171

Query: 186 W 187
           W
Sbjct: 188 W 171

[Close]

BLAST of HG10016202 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-15
Identity = 61/195 (31.28%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQK-----LQLKRILL 60
           +GSL K+ L +YL  L  +P+ TK ++SG+L A+ ++++Q +   Q+     L++  +L 
Sbjct: 14  LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query: 61  KMLYGCLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFT 120
            ++YG    GP  HYL+  ++                Y+VP  + +  V R  +++++  
Sbjct: 74  YLVYGLFVTGPLSHYLYLFME----------------YSVPPEVPWASVKR--LLLDRLF 133

Query: 121 SSPWNHFVFLVYYGLVIEKRTWVQVKAKVRKEF-PSVQLTAWMFWPFASWINHQYVPLQL 180
            +P    +F     L+  K   V V AK+R  F P++Q+  W  W    +IN  YVPLQ 
Sbjct: 134 FAPTFLLLFFFVMNLLEGKNVSVFV-AKMRSGFWPALQMN-WRMWTPLQFININYVPLQF 188

Query: 181 RVIFYNLVAFCWYAY 190
           RV+F N+ A  WYAY
Sbjct: 194 RVLFANMAALFWYAY 188

[Close]

BLAST of HG10016202 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 0


Query: 12  YLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCLYLGPFGHYL 71
           Y+ +L   P++TK +TS  L  IS VV+QK I  +K+    ++   ++G L   P  HY 
Sbjct: 17  YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWG-LISSPLVHYW 76

Query: 72  HQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHFVFLVYYGLV 131
           H ILD++F+  +D      K                 ++V+Q   +P+ +  F     ++
Sbjct: 77  HIILDRLFKNIKDKYQSWGK-----------------LIVDQLVFAPFINIAFYSVLAIL 136

Query: 132 IEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLVAFCWYAYFL 191
             K   +  K      FP+++  +W  WP A  IN ++VP  LRV+F NLV FCW  Y  
Sbjct: 137 DGKPKSILFKLYF-DLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLS 177

Query: 192 V 193
           +
Sbjct: 197 I 177

[Close]

BLAST of HG10016202 vs. ExPASy Swiss-Prot
Match: Q07066 (Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 0


Query: 3   SLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQK-----LQLKRILLKM 62
           SL K+ L +YL  L  +P+ TK ++SG+L A+ ++++Q +   QK     L++  +L  +
Sbjct: 16  SLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYL 75

Query: 63  LYGCLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSS 122
           +YG    GP  HYL+  ++                Y VP  + +  V R  +++++   +
Sbjct: 76  VYGLFVTGPLSHYLYLFME----------------YWVPPEVPWARVKR--LLLDRLFFA 135

Query: 123 PWNHFVFLVYYGLVIEKRTWVQVKAKVRKEF-PSVQLTAWMFWPFASWINHQYVPLQLRV 182
           P    +F     L+  K   V V AK+R  F P++Q+  W  W    +IN  YVPLQ RV
Sbjct: 136 PTFLLLFFFVMNLLEGKNISVFV-AKMRSGFWPALQMN-WRMWTPLQFININYVPLQFRV 188

Query: 183 IFYNLVAFCWYAY 190
           +F N+ A  WYAY
Sbjct: 196 LFANMAALFWYAY 188

[Close]

BLAST of HG10016202 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 57/196 (29.08%), Postives = 88/196 (44.90%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQ-------KLIGIQKLQLKRI 60
           +G L ++ L +YL  L  +P+ TK  TSG+L A+ + ++Q       K    QKL +   
Sbjct: 14  LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73

Query: 61  LLKMLYGCLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQ 120
           L   +YG  + GP GH+ + ++++    +            VP      L+L   +    
Sbjct: 74  LRYAIYGFFFTGPLGHFFYLLMERWIPSE------------VPLAGIKRLLLDRLLFAPA 133

Query: 121 FTSSPWNHFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQ 180
           F S       FLV     +E +      AK++  F       W  W    +IN  Y+P+Q
Sbjct: 134 FLS-----LFFLVMN--FLEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQ 190

Query: 181 LRVIFYNLVAFCWYAY 190
            RV+F NLVA  WYAY
Sbjct: 194 FRVLFANLVALFWYAY 190

[Close]

BLAST of HG10016202 vs. ExPASy TrEMBL
Match: A0A1S3B0V4 (peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103484622 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 144/186 (77.42%), Postives = 159/186 (85.48%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           MGSLAKKGL+KYLSQL QHPLRTKVITSGVL+A+SDV SQKL GIQKLQLKRILLK+LYG
Sbjct: 1   MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
           CLYLGPF HYLHQILDKIF GKRD++TVAKK                 V +EQ T+SPWN
Sbjct: 61  CLYLGPFSHYLHQILDKIFHGKRDTKTVAKK-----------------VALEQLTASPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           HFVFLVYYGL+IE RTWVQVKAKV+KEFPS+QLTAWMFWPF  WINHQ++PLQLRVIF++
Sbjct: 121 HFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHS 169

Query: 181 LVAFCW 187
           LVAFCW
Sbjct: 181 LVAFCW 169

[Close]

BLAST of HG10016202 vs. ExPASy TrEMBL
Match: A0A0A0KJV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513580 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.0e-75
Identity = 141/186 (75.81%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           MGSLAKK L+KYLSQL  HPLRTKVITSGVL+A+SDV SQKL GIQKLQLKRILLK+LYG
Sbjct: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
           CLYLGPF HYLHQILDKIF GKRD++TVAKK                 V +EQ T+SPWN
Sbjct: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKK-----------------VALEQLTASPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           HFVFLVYYGL+IE RTWVQVKAKV+KEFPS+QLTAWMFWPF  WINHQ++PLQ RVIF++
Sbjct: 121 HFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQFRVIFHS 169

Query: 181 LVAFCW 187
           LVAFCW
Sbjct: 181 LVAFCW 169

[Close]

BLAST of HG10016202 vs. ExPASy TrEMBL
Match: A0A6J1EMD3 (peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433873 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.0e-74
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 3   SLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCL 62
           SLAKK  +KY+SQLYQHPLRTKVITSGVLIAISDV SQKLIGIQKLQL+RILLK+LYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLIAISDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHF 122
           YLGPFGH+LHQIL+KIFQGKRDS+TVAKK                 V+VEQ TSSP +HF
Sbjct: 62  YLGPFGHFLHQILEKIFQGKRDSKTVAKK-----------------VLVEQLTSSPLSHF 121

Query: 123 VFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLV 182
           VFLVYYGL+IE+R WV VKAKV+KEFPSVQLTAWMFWPF  WINHQYVPLQLRVIF++LV
Sbjct: 122 VFLVYYGLIIERRPWVVVKAKVKKEFPSVQLTAWMFWPFVGWINHQYVPLQLRVIFHSLV 168

Query: 183 AFCW 187
           AF W
Sbjct: 182 AFVW 168

[Close]

BLAST of HG10016202 vs. ExPASy TrEMBL
Match: A0A6J1KS76 (peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496773 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.9e-74
Identity = 141/184 (76.63%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 3   SLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCL 62
           SLAKK  +KY+SQLYQHPLRTKVITSGVL+AI+DV SQKLIGIQKLQL+RILLK+LYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLVAINDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHF 122
           YLGPFGH+LHQILDKIFQGKRDS+TVAKK                 V+VEQ TSSP +HF
Sbjct: 62  YLGPFGHFLHQILDKIFQGKRDSKTVAKK-----------------VLVEQLTSSPLSHF 121

Query: 123 VFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLV 182
           VFLVYYGL+IE+R WV VKAKV+KEFPSVQLTAWMFWPF  WINHQY+PLQLRVIF++LV
Sbjct: 122 VFLVYYGLIIERRPWVVVKAKVKKEFPSVQLTAWMFWPFVGWINHQYIPLQLRVIFHSLV 168

Query: 183 AFCW 187
           AF W
Sbjct: 182 AFVW 168

[Close]

BLAST of HG10016202 vs. ExPASy TrEMBL
Match: A0A6J1CLF0 (peroxisomal membrane protein PMP22 OS=Momordica charantia OX=3673 GN=LOC111012246 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.8e-71
Identity = 133/186 (71.51%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           MGS+AKKGL KY+SQL QHPLRTK+IT+GVL  ISDVVSQKL GIQKLQ KR++LK+L+G
Sbjct: 1   MGSVAKKGLQKYVSQLQQHPLRTKIITAGVLSGISDVVSQKLTGIQKLQFKRLILKVLFG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
            +YLGPFGHYLHQILDKIF+GKRDS+TVAKK                 V++EQ T+SPWN
Sbjct: 61  AVYLGPFGHYLHQILDKIFKGKRDSKTVAKK-----------------VVLEQLTASPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           HFVFLVYYGLVIE+R WV VKAKV+K+FPSVQLTAWMFWP   W+NHQYVPLQLRV+F++
Sbjct: 121 HFVFLVYYGLVIERRPWVHVKAKVKKDFPSVQLTAWMFWPIVGWLNHQYVPLQLRVVFHS 169

Query: 181 LVAFCW 187
           L+AF W
Sbjct: 181 LIAFFW 169

[Close]

BLAST of HG10016202 vs. TAIR 10
Match: AT4G14305.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 209.1 bits (531), Expect = 3.4e-54
Identity = 97/186 (52.15%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 1   MGSLAKKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYG 60
           M  LAK    KYL QL  HPLRTK IT+GVL   SD ++QK+ G++++Q +R+LL MLYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  CLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWN 120
             Y GPFGH+ H+++D IF+GK+ + TVAKK                 V++EQ TSSPWN
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKK-----------------VLLEQLTSSPWN 120

Query: 121 HFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYN 180
           +F+F+ YYGLV+E R W  VK K+ K++P++QLTAW FWP   W+N+QYVPLQ RV+F +
Sbjct: 121 NFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSS 169

Query: 181 LVAFCW 187
            VA CW
Sbjct: 181 FVASCW 169

[Close]

BLAST of HG10016202 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-52
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = 0


Query: 6   KKGLDKYLSQLYQHPLRTKVITSGVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCLYLG 65
           K  L +YLSQL QHPLRTK IT+GVL  +SDVVSQKL GIQK+QL+R+LLK+++   +LG
Sbjct: 8   KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query: 66  PFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHFVFL 125
           P GH+ H  LDK F+GK+D++TVAKK                 V++EQ T SP NH +F+
Sbjct: 68  PAGHFFHTYLDKFFKGKKDTQTVAKK-----------------VILEQLTLSPLNHLLFM 127

Query: 126 VYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLVAFC 185
           +YYG+VIE+  W  V+ +++K +P+VQLTAW F+P   WIN++YVPL  RVI ++LVAF 
Sbjct: 128 IYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFF 171

Query: 186 W 187
           W
Sbjct: 188 W 171

[Close]

BLAST of HG10016202 vs. TAIR 10
Match: AT4G14305.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 178.3 bits (451), Expect = 6.4e-45
Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 29  GVLIAISDVVSQKLIGIQKLQLKRILLKMLYGCLYLGPFGHYLHQILDKIFQGKRDSRTV 88
           GVL   SD ++QK+ G++++Q +R+LL MLYG  Y GPFGH+ H+++D IF+GK+ + TV
Sbjct: 17  GVLAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTV 76

Query: 89  AKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHFVFLVYYGLVIEKRTWVQVKAKVRKEF 148
           AKK                 V++EQ TSSPWN+F+F+ YYGLV+E R W  VK K+ K++
Sbjct: 77  AKK-----------------VLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDY 136

Query: 149 PSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLVAFCW 187
           P++QLTAW FWP   W+N+QYVPLQ RV+F + VA CW
Sbjct: 137 PTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCW 157

[Close]

BLAST of HG10016202 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.7e-10
Identity = 46/180 (25.56%), Postives = 77/180 (42.78%), Query Frame = 0


Query: 12  YLSQLYQHPLRTKVITSGVLIAISDVVSQKLI--GIQKLQLKRILLKMLYGCLYLGPFGH 71
           YL +L  HP  TK IT+ V+   +D+ SQ +         L R      +G ++LGP  H
Sbjct: 82  YLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQH 141

Query: 72  YLHQILDKIFQGKRDSRTVAKKVYAVPFHLFFHLVLRTEVMVEQFTSSPWNHFVFLVYYG 131
                L KI   KRD  T  KK                 +M+ Q    P ++ VF   Y 
Sbjct: 142 LWFSYLSKILP-KRDVLTTFKK-----------------IMMGQVLFGPVSNTVF-YSYN 201

Query: 132 LVIEKRTWVQVKAKVRKEFPSVQLTAWMFWPFASWINHQYVPLQLRVIFYNLVAFCWYAY 190
             ++     ++ A+++++         M+WP   ++  +YVP+ L+ +  +  A+ W  Y
Sbjct: 202 AALQGENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIY 242

[Close]

BLAST of HG10016202 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-08
Identity = 50/205 (24.39%), Postives = 87/205 (42.44%), Query Frame = 0


Query: 12  YLSQLYQHPLRTKVITSGVLIAISDVVSQ---------KLIGIQ---------------- 71
           Y   L  HP++T+VI+SG L    DV +Q         +L+ +                 
Sbjct: 8   YQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVKW 67

Query: 72  ------KLQLKRILLKMLYGCLYLGPFGHYLHQILDKIFQGKRDSRTVAKKVYAVPFHLF 131
                 K+  KR+ +  ++G  ++GP GH+ ++ LDK          +  K+  VP    
Sbjct: 68  KQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKF---------IKLKLRYVPKSTR 127

Query: 132 FHLVLRTEVMVEQFTSSPWNHFVFLVYYGLVIEKRTWVQVKAKVRKEFPSVQLTAWMFWP 186
           F   +  +V ++     P +  VF  Y G    K T  +VK  ++++F          WP
Sbjct: 128 F---VAAKVAMDGLIFGPVDLLVFFTYMGFATGKNT-AEVKEGLKRDFLPALALEGGAWP 187

The following BLAST results are available for this feature:

BLAST of HG10016202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882944.1	2.3e-81	80.65	peroxisomal membrane protein PMP22-like [Benincasa hispida]	[more]
XP_008440019.1	2.3e-76	77.42	PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo]	[more]
XP_004134772.1	1.2e-74	75.81	peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN49094.1 hypothetical pr...	[more]
XP_022926895.1	6.2e-74	77.72	peroxisomal membrane protein PMP22 isoform X1 [Cucurbita moschata] >KAG6594672.1...	[more]
XP_023003048.1	8.1e-74	76.63	peroxisomal membrane protein PMP22 isoform X1 [Cucurbita maxima] >XP_023003049.1...	[more]

BLAST of HG10016202 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZS51	4.5e-51	53.59	Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1...	[more]
P42925	3.0e-15	31.28	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]
Q54GD8	3.3e-14	30.39	PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE...	[more]
Q07066	1.3e-13	31.61	Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2	[more]
Q2KIY1	3.1e-12	29.08	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]

BLAST of HG10016202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0V4	1.1e-76	77.42	peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103484622 PE=3 ...	[more]
A0A0A0KJV4	6.0e-75	75.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513580 PE=3 SV=1	[more]
A0A6J1EMD3	3.0e-74	77.72	peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KS76	3.9e-74	76.63	peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CLF0	1.8e-71	71.51	peroxisomal membrane protein PMP22 OS=Momordica charantia OX=3673 GN=LOC11101224...	[more]

BLAST of HG10016202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14305.1	3.4e-54	52.15	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G04470.1	3.2e-52	53.59	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G14305.2	6.4e-45	50.63	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	6.7e-10	25.56	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT3G24570.1	3.7e-08	24.39	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 131..189 e-value: 1.2E-16 score: 60.6
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 107..189 coord: 1..93
None	No IPR available	PANTHER	PTHR11266:SF86	PEROXISOMAL MEMBRANE PROTEIN PMP22	coord: 107..189 coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016202.1	HG10016202.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane