
HG10016179 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGTAATGGAAGGCGGCGACCGGAGGACTCCGCCGTGGAAGAACCACCATCAGAGAAAGCCTGAAGGTAGTTCTTGTTGTTCTAGTACGAACAACAAGGATTCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTGAACGTTATTAGCGACCAAAATGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAGCAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGA ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGTAATGGAAGGCGGCGACCGGAGGACTCCGCCGTGGAAGAACCACCATCAGAGAAAGCCTGAAGGTAGTTCTTGTTGTTCTAGTACGAACAACAAGGATTCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTGAACGTTATTAGCGACCAAAATGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAGCAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGA ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGTAATGGAAGGCGGCGACCGGAGGACTCCGCCGTGGAAGAACCACCATCAGAGAAAGCCTGAAGGTAGTTCTTGTTGTTCTAGTACGAACAACAAGGATTCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTGAACGTTATTAGCGACCAAAATGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAGCAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGA MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVNVISDQNGENNDQMVKLRQQRSWRPSLQSIPEII Homology
BLAST of HG10016179 vs. NCBI nr
Match: XP_008441100.1 (PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo] >TYK13052.1 hypothetical protein E5676_scaffold255G006540 [Cucumis melo var. makuwa]) HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of HG10016179 vs. NCBI nr
Match: XP_022977330.1 (uncharacterized protein LOC111477681 [Cucurbita maxima]) HSP 1 Score: 174.9 bits (442), Expect = 4.2e-40 Identity = 96/126 (76.19%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of HG10016179 vs. NCBI nr
Match: XP_023544016.1 (uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 170.6 bits (431), Expect = 8.0e-39 Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of HG10016179 vs. NCBI nr
Match: KAG6603773.1 (hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.3 bits (425), Expect = 4.0e-38 Identity = 92/126 (73.02%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of HG10016179 vs. NCBI nr
Match: KAG7033944.1 (hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 168.3 bits (425), Expect = 4.0e-38 Identity = 92/126 (73.02%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A5D3CNX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006540 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A1S3B2N5 (uncharacterized protein LOC103485326 OS=Cucumis melo OX=3656 GN=LOC103485326 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A6J1IM02 (uncharacterized protein LOC111477681 OS=Cucurbita maxima OX=3661 GN=LOC111477681 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40 Identity = 96/126 (76.19%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A0A0KHU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514300 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 9.5e-38 Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A200QLU8 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9009g2 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.9e-10 Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 0
BLAST of HG10016179 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 41/130 (31.54%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of HG10016179 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05 Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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