HG10016179 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10016179
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSPARK domain-containing protein
LocationChr03: 3367056 .. 3367415 (-)
RNA-Seq ExpressionHG10016179
SyntenyHG10016179
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGTAATGGAAGGCGGCGACCGGAGGACTCCGCCGTGGAAGAACCACCATCAGAGAAAGCCTGAAGGTAGTTCTTGTTGTTCTAGTACGAACAACAAGGATTCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTGAACGTTATTAGCGACCAAAATGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAGCAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGA

mRNA sequence

ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGTAATGGAAGGCGGCGACCGGAGGACTCCGCCGTGGAAGAACCACCATCAGAGAAAGCCTGAAGGTAGTTCTTGTTGTTCTAGTACGAACAACAAGGATTCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTGAACGTTATTAGCGACCAAAATGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAGCAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGA

Coding sequence (CDS)

ATGGGTAACTGTTGCAGAGGTCAATCCTCCACTCCGGTAATGGAAGGCGGCGACCGGAGGACTCCGCCGTGGAAGAACCACCATCAGAGAAAGCCTGAAGGTAGTTCTTGTTGTTCTAGTACGAACAACAAGGATTCAAAAGAAGGTAATTTGAGAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGGATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTGAACGTTATTAGCGACCAAAATGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAGCAACGTTCATGGAGGCCTTCTTTGCAAAGCATTCCTGAGATAATTTGA

Protein sequence

MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVNVISDQNGENNDQMVKLRQQRSWRPSLQSIPEII
Homology
BLAST of HG10016179 vs. NCBI nr
Match: XP_008441100.1 (PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo] >TYK13052.1 hypothetical protein E5676_scaffold255G006540 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRK-PEGSSCCSSTNNKDSKEGNLREVKIRMT 60
           MGNCC+GQ STPV    DRRTPP KNH QR+  EGSSCC       SKE NLREVKIRMT
Sbjct: 1   MGNCCKGQYSTPVTGCSDRRTPPLKNHRQRRHEEGSSCC-------SKETNLREVKIRMT 60

Query: 61  KKELEELVGWLNMADSSFEHVMARLVNVISDQNGE-NNDQMVKLRQQRSWRPSLQSIPEI 120
           KKELEELVGWLNMADSSFEHVMARLVNVI+DQNG+ NNDQ+VKLRQQRSWRPSLQSIPEI
Sbjct: 61  KKELEELVGWLNMADSSFEHVMARLVNVINDQNGDNNNDQVVKLRQQRSWRPSLQSIPEI 114

BLAST of HG10016179 vs. NCBI nr
Match: XP_022977330.1 (uncharacterized protein LOC111477681 [Cucurbita maxima])

HSP 1 Score: 174.9 bits (442), Expect = 4.2e-40
Identity = 96/126 (76.19%), Postives = 101/126 (80.16%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTK 60
           MGNCCRGQSSTPV+ GGDRR  P KN  QR+    SC  ST  K SKEGNLRE+KIRMTK
Sbjct: 1   MGNCCRGQSSTPVVSGGDRRAQPPKNLRQRRHGAGSC--STTIKGSKEGNLRELKIRMTK 60

Query: 61  KELEELVGWLNMADSSFEHVMARLVNVISDQNG-------ENNDQMVKLRQQRSWRPSLQ 120
           KEL+EL+GWLNMADSSFE VMARLVNVISDQNG       EN  QMVKLRQQRSWRPSLQ
Sbjct: 61  KELKELIGWLNMADSSFEQVMARLVNVISDQNGDDSEEDDENIGQMVKLRQQRSWRPSLQ 120

BLAST of HG10016179 vs. NCBI nr
Match: XP_023544016.1 (uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 8.0e-39
Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTK 60
           MGNCCRGQSSTPV+ GGDRR  P KN  QR+   +SC  ST  K SKEGNLRE+KIRMTK
Sbjct: 1   MGNCCRGQSSTPVVSGGDRRALPPKNLSQRRHGANSC--STTIKGSKEGNLRELKIRMTK 60

Query: 61  KELEELVGWLNMADSSFEHVMARLVNVISDQNGENND-------QMVKLRQQRSWRPSLQ 120
           KEL+ELVGWLNMADSSFE VMARLVNVIS+ NG++++       QMVKLRQQRSWRPSLQ
Sbjct: 61  KELKELVGWLNMADSSFEQVMARLVNVISEHNGDDSEEDDRNIGQMVKLRQQRSWRPSLQ 120

BLAST of HG10016179 vs. NCBI nr
Match: KAG6603773.1 (hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 4.0e-38
Identity = 92/126 (73.02%), Postives = 103/126 (81.75%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTK 60
           MGNCCRGQSSTPV+ G +RR  P KN  QR+   SSC  ST  K SKEGN+RE+KIRMTK
Sbjct: 1   MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSC--STTIKGSKEGNMRELKIRMTK 60

Query: 61  KELEELVGWLNMADSSFEHVMARLVNVISDQNGENND-------QMVKLRQQRSWRPSLQ 120
           KEL+ELVGWLNMADSSFE VMARLVNVIS+QNG++++       QMVKLRQQRSWRPSLQ
Sbjct: 61  KELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEEDRNIGQMVKLRQQRSWRPSLQ 120

BLAST of HG10016179 vs. NCBI nr
Match: KAG7033944.1 (hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.3 bits (425), Expect = 4.0e-38
Identity = 92/126 (73.02%), Postives = 103/126 (81.75%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTK 60
           MGNCCRGQSSTPV+ G +RR  P KN  QR+   SSC  ST  K SKEGN+RE+KIRMTK
Sbjct: 1   MGNCCRGQSSTPVVSGRNRRALPPKNVRQRRHGASSC--STTIKGSKEGNMRELKIRMTK 60

Query: 61  KELEELVGWLNMADSSFEHVMARLVNVISDQNGENND-------QMVKLRQQRSWRPSLQ 120
           KEL+ELVGWLNMADSSFE VMARLVNVIS+QNG++++       QMVKLRQQRSWRPSLQ
Sbjct: 61  KELKELVGWLNMADSSFEQVMARLVNVISEQNGDDSEEDDRNIGQMVKLRQQRSWRPSLQ 120

BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A5D3CNX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006540 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43
Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRK-PEGSSCCSSTNNKDSKEGNLREVKIRMT 60
           MGNCC+GQ STPV    DRRTPP KNH QR+  EGSSCC       SKE NLREVKIRMT
Sbjct: 1   MGNCCKGQYSTPVTGCSDRRTPPLKNHRQRRHEEGSSCC-------SKETNLREVKIRMT 60

Query: 61  KKELEELVGWLNMADSSFEHVMARLVNVISDQNGE-NNDQMVKLRQQRSWRPSLQSIPEI 120
           KKELEELVGWLNMADSSFEHVMARLVNVI+DQNG+ NNDQ+VKLRQQRSWRPSLQSIPEI
Sbjct: 61  KKELEELVGWLNMADSSFEHVMARLVNVINDQNGDNNNDQVVKLRQQRSWRPSLQSIPEI 114

BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A1S3B2N5 (uncharacterized protein LOC103485326 OS=Cucumis melo OX=3656 GN=LOC103485326 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.8e-43
Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRK-PEGSSCCSSTNNKDSKEGNLREVKIRMT 60
           MGNCC+GQ STPV    DRRTPP KNH QR+  EGSSCC       SKE NLREVKIRMT
Sbjct: 1   MGNCCKGQYSTPVTGCSDRRTPPLKNHRQRRHEEGSSCC-------SKETNLREVKIRMT 60

Query: 61  KKELEELVGWLNMADSSFEHVMARLVNVISDQNGE-NNDQMVKLRQQRSWRPSLQSIPEI 120
           KKELEELVGWLNMADSSFEHVMARLVNVI+DQNG+ NNDQ+VKLRQQRSWRPSLQSIPEI
Sbjct: 61  KKELEELVGWLNMADSSFEHVMARLVNVINDQNGDNNNDQVVKLRQQRSWRPSLQSIPEI 114

BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A6J1IM02 (uncharacterized protein LOC111477681 OS=Cucurbita maxima OX=3661 GN=LOC111477681 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 96/126 (76.19%), Postives = 101/126 (80.16%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTK 60
           MGNCCRGQSSTPV+ GGDRR  P KN  QR+    SC  ST  K SKEGNLRE+KIRMTK
Sbjct: 1   MGNCCRGQSSTPVVSGGDRRAQPPKNLRQRRHGAGSC--STTIKGSKEGNLRELKIRMTK 60

Query: 61  KELEELVGWLNMADSSFEHVMARLVNVISDQNG-------ENNDQMVKLRQQRSWRPSLQ 120
           KEL+EL+GWLNMADSSFE VMARLVNVISDQNG       EN  QMVKLRQQRSWRPSLQ
Sbjct: 61  KELKELIGWLNMADSSFEQVMARLVNVISDQNGDDSEEDDENIGQMVKLRQQRSWRPSLQ 120

BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A0A0KHU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514300 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.5e-38
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWKNHHQRKPEGSSCCSSTNNKDSKEGNLREVKIRMTK 60
           MGNCC+ QSSTPVMEG    TPP+KNH QR+ +  S         SKE NLREVKIRMTK
Sbjct: 1   MGNCCKAQSSTPVMEGSHPTTPPFKNHPQRRNQEGS---------SKETNLREVKIRMTK 60

Query: 61  KELEELVGWLNMADSSFEHVMARLVNVISDQNGE-NNDQMVKLRQQRSWRPSLQSIPEII 120
           KEL+ELVGWLNMADSSFE VMARLVNVI+ QNG+ NNDQ+VKLRQQRSWRPSLQSIPE+I
Sbjct: 61  KELQELVGWLNMADSSFEQVMARLVNVINYQNGDNNNDQVVKLRQQRSWRPSLQSIPEMI 111

BLAST of HG10016179 vs. ExPASy TrEMBL
Match: A0A200QLU8 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9009g2 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.9e-10
Identity = 53/142 (37.32%), Postives = 72/142 (50.70%), Query Frame = 0

Query: 1   MGNCCRGQSSTPVMEGGDRRTPPWK------------------------NHHQRKPEGSS 60
           MGNCCR +SST    G D  TP  +                         HHQ + +   
Sbjct: 1   MGNCCRHESST-TWAGDDWGTPKSETFTKEMSKTSTTSEENEEKNLLSCTHHQHEND--- 60

Query: 61  CCSSTNNKDSKEGNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVNVISDQNGENN 119
             +  N K S   +  EVKIR+TKKELEEL+G +++   S E ++A+L+N  SD +  + 
Sbjct: 61  --NQKNGKSSSSSSSTEVKIRITKKELEELLGKIDVQGLSVEQIIAQLMNSTSDDDQYH- 120

BLAST of HG10016179 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 41/130 (31.54%), Postives = 61/130 (46.92%), Query Frame = 0

Query: 1   MGNC-CRGQSSTPVMEGGD-------RRTPPWKNHHQRKPEGSSCCSSTNN----KDSKE 60
           MGNC C  + +T    G D       RR       H    +G      T+N      S  
Sbjct: 1   MGNCICVTEKTTTSWSGDDNGSYNKRRRRRRSTVVHDDNDDGEKLLGETSNVTSTSSSSS 60

Query: 61  GNLREVKIRMTKKELEELVGWLNMADSSFEHVMARLVNVISDQNGENNDQMVKLRQQRSW 119
              RE+KIR+TKKELE+L+  + +   + E ++++L+    DQ G +   +    Q   W
Sbjct: 61  SERREIKIRITKKELEDLMRNIGLKSLTAEEILSKLIFEGGDQIGFSAVDVTNHHQ--PW 120

BLAST of HG10016179 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. )

HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05
Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 0

Query: 1   MGNCCRGQSST--PVMEGGDRRTPPWKNHH---QRKPEGSSCCSSTNNKDSKEGNLREVK 60
           MGNC R +S       +  +  T   ++HH   +   +G     + ++K S   +  E+K
Sbjct: 1   MGNCLRHESEMHWAGEDWDEFITEDEEDHHYSSKTTRDGKPVIVTRDSKSSVPSH--EIK 60

Query: 61  IRMTKKELEELVGWLNMADSSFEHVMARLVNVISDQNGENNDQMVKLRQQRSWRPSLQSI 119
           IR+TKK+L +L+  +N+ D +F+        +       NN    +  QQR WRP LQSI
Sbjct: 61  IRLTKKQLHDLLSKVNVHDLTFQQQTFSCPIL-------NNRGYEEANQQRLWRPVLQSI 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008441100.11.2e-4280.99PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo] >TYK13052.1 hypot... [more]
XP_022977330.14.2e-4076.19uncharacterized protein LOC111477681 [Cucurbita maxima][more]
XP_023544016.18.0e-3973.81uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo][more]
KAG6603773.14.0e-3873.02hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7033944.14.0e-3873.02hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CNX55.8e-4380.99Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B2N55.8e-4380.99uncharacterized protein LOC103485326 OS=Cucumis melo OX=3656 GN=LOC103485326 PE=... [more]
A0A6J1IM022.1e-4076.19uncharacterized protein LOC111477681 OS=Cucurbita maxima OX=3661 GN=LOC111477681... [more]
A0A0A0KHU79.5e-3874.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514300 PE=4 SV=1[more]
A0A200QLU84.9e-1037.32Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9009g2 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G21920.11.1e-0631.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT3G20340.16.2e-0530.89Expression of the gene is downregulated in the presence of paraquat, an inducer ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availablePANTHERPTHR33647:SF5OS01G0793900 PROTEINcoord: 1..117
NoneNo IPR availablePANTHERPTHR33647OS01G0793900 PROTEINcoord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10016179.1HG10016179.1mRNA