HG10016104 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10016104
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Serine/arginine repetitive matrix protein 1
Location	Chr03: 2836100 .. 2836936 (-)
RNA-Seq Expression	HG10016104
Synteny	HG10016104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCTGTATTAGCTCCGGCAAATCCTTCAATTCAGCTAACAAATTCGATCGGAATTCTAACAATGGATGCAGAGACCCGCCGTCTTCCATGGAGGAAGAGACCGTCAAAGAAGTGCTTTCTGAAACCCCTGCTCTGAAACCGCCGCCGTCGCCGCCGAAGAAGAGTTTTCCACTGGAAGAAGACGAAGCCCAAAAACCAGTCGGTAATGAGATCGAGAAGAAGCTTCGTGAAATTCCCGTTAACGGAATTGCAGAGCAACCTTCTGAATTCAATGAAATTTCCCATCCCAACGACTGTCTCCCAGTCTCCGCCGCTATTTTCACCGATCAAATGGATGGCGGCGGAGAGGTTCATCAAACGGTTTTGAAATCATCGCCAGTGAAATTGCCGAAGAATCAAGCAATTTCCGGAGACGTTGAATTAAAAAGAGAAATATCGCAGAACAGGACATTGACCCGGAGATCCGACCAGTCGCCAGCCCGACGAAACGGCGCCGTGGGGTCGATGAGAATGGTTCATAACAGAGACATGAGTCCGGCAATGGCGCGGCGAGGATTAAGAGCGGAGCCTCCCCGGAGAGACCCAGATGAGAATTTCAGCCGGAGATCCCGGTCGCCGGCTACCGCACGTTCCGACGGCGCAGGGTCTAGATCTGCCCTGAGTCGGACCCCGTCAGTGAGAAAGACCGGTAAATCATCGCCCATTAGGGCAGCGATGGCGACAAGTCAAAAAGTAGTAGAAGAAAACAATATCATAGATGGAAAATTCAACACTCAGATCGAGTCACTTGAGAACCCTCTGGTTTCATTAGAGTGCTTCATCTTCCTCTGA

mRNA sequence

ATGGGTTGCTGTATTAGCTCCGGCAAATCCTTCAATTCAGCTAACAAATTCGATCGGAATTCTAACAATGGATGCAGAGACCCGCCGTCTTCCATGGAGGAAGAGACCGTCAAAGAAGTGCTTTCTGAAACCCCTGCTCTGAAACCGCCGCCGTCGCCGCCGAAGAAGAGTTTTCCACTGGAAGAAGACGAAGCCCAAAAACCAGTCGGTAATGAGATCGAGAAGAAGCTTCGTGAAATTCCCGTTAACGGAATTGCAGAGCAACCTTCTGAATTCAATGAAATTTCCCATCCCAACGACTGTCTCCCAGTCTCCGCCGCTATTTTCACCGATCAAATGGATGGCGGCGGAGAGGTTCATCAAACGGTTTTGAAATCATCGCCAGTGAAATTGCCGAAGAATCAAGCAATTTCCGGAGACGTTGAATTAAAAAGAGAAATATCGCAGAACAGGACATTGACCCGGAGATCCGACCAGTCGCCAGCCCGACGAAACGGCGCCGTGGGGTCGATGAGAATGGTTCATAACAGAGACATGAGTCCGGCAATGGCGCGGCGAGGATTAAGAGCGGAGCCTCCCCGGAGAGACCCAGATGAGAATTTCAGCCGGAGATCCCGGTCGCCGGCTACCGCACGTTCCGACGGCGCAGGGTCTAGATCTGCCCTGAGTCGGACCCCGTCAGTGAGAAAGACCGGTAAATCATCGCCCATTAGGGCAGCGATGGCGACAAGTCAAAAAGTAGTAGAAGAAAACAATATCATAGATGGAAAATTCAACACTCAGATCGAGTCACTTGAGAACCCTCTGGTTTCATTAGAGTGCTTCATCTTCCTCTGA

Coding sequence (CDS)

ATGGGTTGCTGTATTAGCTCCGGCAAATCCTTCAATTCAGCTAACAAATTCGATCGGAATTCTAACAATGGATGCAGAGACCCGCCGTCTTCCATGGAGGAAGAGACCGTCAAAGAAGTGCTTTCTGAAACCCCTGCTCTGAAACCGCCGCCGTCGCCGCCGAAGAAGAGTTTTCCACTGGAAGAAGACGAAGCCCAAAAACCAGTCGGTAATGAGATCGAGAAGAAGCTTCGTGAAATTCCCGTTAACGGAATTGCAGAGCAACCTTCTGAATTCAATGAAATTTCCCATCCCAACGACTGTCTCCCAGTCTCCGCCGCTATTTTCACCGATCAAATGGATGGCGGCGGAGAGGTTCATCAAACGGTTTTGAAATCATCGCCAGTGAAATTGCCGAAGAATCAAGCAATTTCCGGAGACGTTGAATTAAAAAGAGAAATATCGCAGAACAGGACATTGACCCGGAGATCCGACCAGTCGCCAGCCCGACGAAACGGCGCCGTGGGGTCGATGAGAATGGTTCATAACAGAGACATGAGTCCGGCAATGGCGCGGCGAGGATTAAGAGCGGAGCCTCCCCGGAGAGACCCAGATGAGAATTTCAGCCGGAGATCCCGGTCGCCGGCTACCGCACGTTCCGACGGCGCAGGGTCTAGATCTGCCCTGAGTCGGACCCCGTCAGTGAGAAAGACCGGTAAATCATCGCCCATTAGGGCAGCGATGGCGACAAGTCAAAAAGTAGTAGAAGAAAACAATATCATAGATGGAAAATTCAACACTCAGATCGAGTCACTTGAGAACCCTCTGGTTTCATTAGAGTGCTTCATCTTCCTCTGA

Protein sequence

MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPLEEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMSPAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAAMATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL

Homology

[Close]

BLAST of HG10016104 vs. NCBI nr
Match: XP_038882208.1 (uncharacterized protein LOC120073430 [Benincasa hispida])

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 238/278 (85.61%), Postives = 255/278 (91.73%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPL 60
           MGCC+SSGKSFNS NKF RNS+NG RDPPSSMEEETVKEVLSETP+LKPPPSPPKK+ P 
Sbjct: 1   MGCCLSSGKSFNSPNKFHRNSDNGSRDPPSSMEEETVKEVLSETPSLKPPPSPPKKNSPP 60

Query: 61  EEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVH 120
           EED+  KPVGNEIEKKL EI +NGIAE PSEF EISHPN+C+ VS AI T+QMDGGGE+H
Sbjct: 61  EEDQVLKPVGNEIEKKLCEISINGIAELPSEFYEISHPNECISVSTAITTEQMDGGGEIH 120

Query: 121 QTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMS 180
           Q VLKSSPVKLPK+Q+ISGD E+KREISQNRTLTRRSDQSP RRNGA+GSMRMVHNRDM+
Sbjct: 121 QMVLKSSPVKLPKDQSISGDFEVKREISQNRTLTRRSDQSPVRRNGAIGSMRMVHNRDMN 180

Query: 181 PAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAA 240
           PAMARR LRAEPPRRDPDEN  RRSRSPATARSDG GSRSALSRTPSVRK+GKSSP RAA
Sbjct: 181 PAMARRVLRAEPPRRDPDENSIRRSRSPATARSDGVGSRSALSRTPSVRKSGKSSPNRAA 240

Query: 241 MATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
            ATSQKVVEENNIIDGKFN+QIESLENPLVSLECFIFL
Sbjct: 241 TATSQKVVEENNIIDGKFNSQIESLENPLVSLECFIFL 278

[Close]

BLAST of HG10016104 vs. NCBI nr
Match: XP_008441084.1 (PREDICTED: uncharacterized protein LOC103485312 [Cucumis melo] >KAA0052709.1 putative BEST plant protein match is: (TAIR:plant.1) protein [Cucumis melo var. makuwa] >TYK13115.1 putative BEST plant protein match is: (TAIR:plant.1) protein [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 4.6e-114
Identity = 227/278 (81.65%), Postives = 243/278 (87.41%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPL 60
           MGCC+SS +SFNS NKF  +S N  RDPPSSMEEETVKEVLSETPALKPPP+   K+ P 
Sbjct: 1   MGCCLSSSQSFNSPNKFHPSSVNANRDPPSSMEEETVKEVLSETPALKPPPN---KNCPP 60

Query: 61  EEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVH 120
           EEDE  KP+G+E EKKL EIP+NGI EQPSEF EISH N C+ VSAA FTDQ DGGGEVH
Sbjct: 61  EEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQADGGGEVH 120

Query: 121 QTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMS 180
           QT LKSSPVKL KNQ++S DVELKREI Q+RTLTRRSDQSP RRNGAVGSMRMVHNRDMS
Sbjct: 121 QTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSMRMVHNRDMS 180

Query: 181 PAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAA 240
           PAMARRGLRAEPPRRDPDEN SRRS+SP+TA SD AG RSALSRTPS RK+GKSSPIRA 
Sbjct: 181 PAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSALSRTPSTRKSGKSSPIRAM 240

Query: 241 MATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
            ATSQKVVEENNI+DGKFNTQIESLENPLVSLECFIFL
Sbjct: 241 TATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of HG10016104 vs. NCBI nr
Match: XP_011658203.1 (uncharacterized protein LOC105435961 [Cucumis sativus] >KGN49202.1 hypothetical protein Csa_002835 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-112
Identity = 225/278 (80.94%), Postives = 242/278 (87.05%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPL 60
           MGCC+SS +SF+S NKF  NS N  RDPPSSMEEETVKEVLSETPALKP   P K +   
Sbjct: 1   MGCCLSSTQSFSSPNKFHSNSVNVSRDPPSSMEEETVKEVLSETPALKP---PQKNNSAP 60

Query: 61  EEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVH 120
           E+DE +KP+G+EIEKKL EIP+NGI EQPSEF EISH N C+ VSAA FTDQ DGGGEVH
Sbjct: 61  EQDEFRKPLGDEIEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQTDGGGEVH 120

Query: 121 QTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMS 180
           QTVLKSSPVKL KNQ++S DVELKREI Q+RTLTRRSDQSP RRNGAVGS+RMVHNRDMS
Sbjct: 121 QTVLKSSPVKLTKNQSVSSDVELKREIQQSRTLTRRSDQSPVRRNGAVGSIRMVHNRDMS 180

Query: 181 PAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAA 240
           PAMARRGLRAEPPRRDPDEN SRRS SP+TARSD AG RSALSRTPS RK+GKSSPI A 
Sbjct: 181 PAMARRGLRAEPPRRDPDENSSRRSHSPSTARSDSAGYRSALSRTPSARKSGKSSPITAM 240

Query: 241 MATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
            ATSQKVVEENNI+DGKFNTQIESLENPLVSLECFIFL
Sbjct: 241 TATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of HG10016104 vs. NCBI nr
Match: XP_022926404.1 (uncharacterized protein LOC111433567 [Cucurbita moschata])

HSP 1 Score: 333.6 bits (854), Expect = 1.7e-87
Identity = 199/298 (66.78%), Postives = 225/298 (75.50%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRN---------SNNGCRDPPSSMEEETVKEVLSETPALKP-P 60
           MGCC+SSGKS +SA+KFD           ++NG R+PPSSMEEETVKEVLSET ALKP  
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLA 60

Query: 61  PSPPKKSFPLEEDEAQKPVGN----EIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSA 120
            SPP K+ P EEDEAQKPVG+    EIEKKL EIP+NGI +QPSEF+EIS+P+     + 
Sbjct: 61  ISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFF--AT 120

Query: 121 AIFTDQMDGGGEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNG 180
           A FTD MDGG EVHQ VLK+    LP NQ+I G+V LKR++S N+TL RRSDQSP RRN 
Sbjct: 121 ANFTDIMDGGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180

Query: 181 AVGSMRMVHNRDMSPAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTP 240
            VGS R+V  RD SPAM  RGLR EP ++DPDENF RRSRSPATAR D  GSRSAL RTP
Sbjct: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240

Query: 241 SVRKTGKSSPIRA------AMATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
           SVRK+GKSSP+R       A ATS+KVVEENNI DG   TQIESLENPLVSLECFIFL
Sbjct: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of HG10016104 vs. NCBI nr
Match: KAG7026590.1 (hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333.2 bits (853), Expect = 2.2e-87
Identity = 199/298 (66.78%), Postives = 225/298 (75.50%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRN---------SNNGCRDPPSSMEEETVKEVLSETPALKP-P 60
           MGCC+SSGKS +SA+KFD           ++NG R+PPSSMEEETVKEVLSET ALKP P
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60

Query: 61  PSPPKKSFPLEEDEAQKPVGN----EIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSA 120
            SPP KS P EEDEAQKPVG+    EIEKKL EIP+NGI +Q SEF+EIS+P+     + 
Sbjct: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFF--AT 120

Query: 121 AIFTDQMDGGGEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNG 180
           A FTD MDGG EVHQ VLK+    LP NQ+I G+V LKR++S N+TL RRSDQSP RRN 
Sbjct: 121 ANFTDIMDGGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180

Query: 181 AVGSMRMVHNRDMSPAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTP 240
            VGS R+V  RD SPAM  RGLR EP ++DPDENF RRSRSPATAR D  GSRSAL RTP
Sbjct: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240

Query: 241 SVRKTGKSSPIRA------AMATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
           SVRK+GKSSP+R       A ATS+KVVEENNI +G   TQIESLENPLVSLECFIFL
Sbjct: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of HG10016104 vs. ExPASy TrEMBL
Match: A0A5D3CNI1 (Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007250 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.3e-114
Identity = 227/278 (81.65%), Postives = 243/278 (87.41%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPL 60
           MGCC+SS +SFNS NKF  +S N  RDPPSSMEEETVKEVLSETPALKPPP+   K+ P 
Sbjct: 1   MGCCLSSSQSFNSPNKFHPSSVNANRDPPSSMEEETVKEVLSETPALKPPPN---KNCPP 60

Query: 61  EEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVH 120
           EEDE  KP+G+E EKKL EIP+NGI EQPSEF EISH N C+ VSAA FTDQ DGGGEVH
Sbjct: 61  EEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQADGGGEVH 120

Query: 121 QTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMS 180
           QT LKSSPVKL KNQ++S DVELKREI Q+RTLTRRSDQSP RRNGAVGSMRMVHNRDMS
Sbjct: 121 QTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSMRMVHNRDMS 180

Query: 181 PAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAA 240
           PAMARRGLRAEPPRRDPDEN SRRS+SP+TA SD AG RSALSRTPS RK+GKSSPIRA 
Sbjct: 181 PAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSALSRTPSTRKSGKSSPIRAM 240

Query: 241 MATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
            ATSQKVVEENNI+DGKFNTQIESLENPLVSLECFIFL
Sbjct: 241 TATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of HG10016104 vs. ExPASy TrEMBL
Match: A0A1S3B2L5 (uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.3e-114
Identity = 227/278 (81.65%), Postives = 243/278 (87.41%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPL 60
           MGCC+SS +SFNS NKF  +S N  RDPPSSMEEETVKEVLSETPALKPPP+   K+ P 
Sbjct: 1   MGCCLSSSQSFNSPNKFHPSSVNANRDPPSSMEEETVKEVLSETPALKPPPN---KNCPP 60

Query: 61  EEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVH 120
           EEDE  KP+G+E EKKL EIP+NGI EQPSEF EISH N C+ VSAA FTDQ DGGGEVH
Sbjct: 61  EEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQADGGGEVH 120

Query: 121 QTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMS 180
           QT LKSSPVKL KNQ++S DVELKREI Q+RTLTRRSDQSP RRNGAVGSMRMVHNRDMS
Sbjct: 121 QTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSMRMVHNRDMS 180

Query: 181 PAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAA 240
           PAMARRGLRAEPPRRDPDEN SRRS+SP+TA SD AG RSALSRTPS RK+GKSSPIRA 
Sbjct: 181 PAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSALSRTPSTRKSGKSSPIRAM 240

Query: 241 MATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
            ATSQKVVEENNI+DGKFNTQIESLENPLVSLECFIFL
Sbjct: 241 TATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of HG10016104 vs. ExPASy TrEMBL
Match: A0A0A0KLE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 7.2e-113
Identity = 225/278 (80.94%), Postives = 242/278 (87.05%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEETVKEVLSETPALKPPPSPPKKSFPL 60
           MGCC+SS +SF+S NKF  NS N  RDPPSSMEEETVKEVLSETPALKP   P K +   
Sbjct: 1   MGCCLSSTQSFSSPNKFHSNSVNVSRDPPSSMEEETVKEVLSETPALKP---PQKNNSAP 60

Query: 61  EEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGGGEVH 120
           E+DE +KP+G+EIEKKL EIP+NGI EQPSEF EISH N C+ VSAA FTDQ DGGGEVH
Sbjct: 61  EQDEFRKPLGDEIEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQTDGGGEVH 120

Query: 121 QTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVHNRDMS 180
           QTVLKSSPVKL KNQ++S DVELKREI Q+RTLTRRSDQSP RRNGAVGS+RMVHNRDMS
Sbjct: 121 QTVLKSSPVKLTKNQSVSSDVELKREIQQSRTLTRRSDQSPVRRNGAVGSIRMVHNRDMS 180

Query: 181 PAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSSPIRAA 240
           PAMARRGLRAEPPRRDPDEN SRRS SP+TARSD AG RSALSRTPS RK+GKSSPI A 
Sbjct: 181 PAMARRGLRAEPPRRDPDENSSRRSHSPSTARSDSAGYRSALSRTPSARKSGKSSPITAM 240

Query: 241 MATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
            ATSQKVVEENNI+DGKFNTQIESLENPLVSLECFIFL
Sbjct: 241 TATSQKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

[Close]

BLAST of HG10016104 vs. ExPASy TrEMBL
Match: A0A6J1EF08 (uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC111433567 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 8.1e-88
Identity = 199/298 (66.78%), Postives = 225/298 (75.50%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRN---------SNNGCRDPPSSMEEETVKEVLSETPALKP-P 60
           MGCC+SSGKS +SA+KFD           ++NG R+PPSSMEEETVKEVLSET ALKP  
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLA 60

Query: 61  PSPPKKSFPLEEDEAQKPVGN----EIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSA 120
            SPP K+ P EEDEAQKPVG+    EIEKKL EIP+NGI +QPSEF+EIS+P+     + 
Sbjct: 61  ISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFF--AT 120

Query: 121 AIFTDQMDGGGEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNG 180
           A FTD MDGG EVHQ VLK+    LP NQ+I G+V LKR++S N+TL RRSDQSP RRN 
Sbjct: 121 ANFTDIMDGGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRRNS 180

Query: 181 AVGSMRMVHNRDMSPAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTP 240
            VGS R+V  RD SPAM  RGLR EP ++DPDENF RRSRSPATAR D  GSRSAL RTP
Sbjct: 181 FVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSALGRTP 240

Query: 241 SVRKTGKSSPIRA------AMATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
           SVRK+GKSSP+R       A ATS+KVVEENNI DG   TQIESLENPLVSLECFIFL
Sbjct: 241 SVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECFIFL 292

[Close]

BLAST of HG10016104 vs. ExPASy TrEMBL
Match: A0A6J1CMA7 (uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012433 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 8.7e-50
Identity = 122/193 (63.21%), Postives = 140/193 (72.54%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNG------CRDPPSSMEEETVKEVLSETPALKPPPSPP 60
           MGCC+SSG   NSA+KFDRNS          R+PPSSMEEETVKEVL+ETPALKPP  PP
Sbjct: 1   MGCCVSSG---NSAHKFDRNSAAADEKIYESREPPSSMEEETVKEVLTETPALKPP--PP 60

Query: 61  KKSFPLEEDEAQKPVG-------NEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAA 120
            K+ P +EDEA KPV        NEIEKK+R IP N +AE   EF+EIS P++CL  SAA
Sbjct: 61  PKNHPPDEDEAPKPVADKVKEEENEIEKKIRVIPTNCVAEHACEFSEISSPSECL--SAA 120

Query: 121 IFTDQMDGGGEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGA 180
            FTD+MD G EVHQ V ++SPVKLPKNQ+ SGDV  KRE+  NR L RRSDQSP RRNG 
Sbjct: 121 TFTDKMDDGEEVHQRVFRASPVKLPKNQSFSGDV--KREMLPNRALNRRSDQSPVRRNGV 180

[Close]

BLAST of HG10016104 vs. TAIR 10
Match: AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 8.4e-13
Identity = 86/283 (30.39%), Postives = 128/283 (45.23%), Query Frame = 0


Query: 3   CCISSGKSFNSANKFDRNSNNGCRDPPSSMEEET-VKEVLSETPALKPPPSPPKKSF--- 62
           CC+SSG +       DR + N      + +EEET VKEVLSET    P  S    +F   
Sbjct: 4   CCVSSGTT-------DRENENVSDKNTTIVEEETVVKEVLSETTLFTPSSSFRTSTFKDP 63

Query: 63  ---PLEEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDG 122
               + EDE +KP    ++     + +   +  P E +E+S         +   T  M+G
Sbjct: 64  VKTKIREDEEKKP--GFLKMASDPVLIRPGSVDPEEGSEVSEICSLSLSESVSSTVVMNG 123

Query: 123 GGEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTLTRRSDQSPARRNGAVGSMRMVH 182
             E H        V + + ++     + + +++ N   TRR+DQSP +RN    +     
Sbjct: 124 YDEEH--------VMMKQRKSQRSPAKTRTQVTGNNYPTRRTDQSPRKRNNGTCN----- 183

Query: 183 NRDMSPAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPSVRKTGKSS 242
                      G R     RDP E   RRSRSPAT RS    ++S+       RK  + S
Sbjct: 184 -----------GARYGSGVRDPGERSGRRSRSPATNRSVMDSNQSSRVGGAKTRKNNQ-S 243

Query: 243 PIRAAMATSQKVVEENNIIDGKFNTQIESLENPLVSLECFIFL 279
           P R  +  ++  +++    +  + T+ E LENPLVSLECFIFL
Sbjct: 244 PGRVRLDPAKNGLDQQQHQNYGYTTE-ELLENPLVSLECFIFL 251

[Close]

BLAST of HG10016104 vs. TAIR 10
Match: AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). )

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-07
Identity = 86/297 (28.96%), Postives = 122/297 (41.08%), Query Frame = 0


Query: 1   MGCCISSGKSFNSANKFDRNSNNGCRDPPSSMEEET-VKEVLSETPAL---KPPPSPPKK 60
           MGCC+SS     +  K D  S      PPS ++EET VKEVLSET  L       +  K 
Sbjct: 1   MGCCLSSA---TADKKDDPVSGKNTARPPSVIDEETVVKEVLSETTLLTSSNDNSTVEKT 60

Query: 61  SFPLEEDEAQKPVGNEIEKKLREIPVNGIAEQPSEFNEISHPNDCLPVSAAIFTDQMDGG 120
           +    ++E +K  G  ++     +       +P + +E+S  N  L  S     ++ D  
Sbjct: 61  TLTKIQEEEEKKPGIVVDVAQEPVLTKPSLVEPEKGSEVSE-NCSLSESLLSIVNKYD-- 120

Query: 121 GEVHQTVLKSSPVKLPKNQAISGDVELKREISQNRTL----TRRSDQSPARRNG--AVGS 180
                       VK  K+  +      K   S+NR +     RR+D SP +RN     GS
Sbjct: 121 ---------EEEVKQMKSHVVRQRSPAK---SRNRVMVSYPNRRTDMSPRKRNNEEEAGS 180

Query: 181 MRMVHNRDMSPAMARRGLRAEPPRRDPDENFSRRSRSPATARSDGAGSRSALSRTPS--V 240
           +R+V +   +              RD  E   RRSRSPA  RS   G   +   T S   
Sbjct: 181 VRLVPSATGT--------------RDSTERSERRSRSPAMNRSVMMGPTRSQQSTDSCGA 240

Query: 241 RKTGKSSPIRAAMATSQKVVEEN-------NIIDGKFNTQIESLENPLVSLECFIFL 279
            +    SP R  +  +    ++          I    +   +S ENPLVSLECFIFL
Sbjct: 241 MRRQSQSPGRVRLNPNMNGSDQECNHHKWPGSIGNYNSAPNDSFENPLVSLECFIFL 265

The following BLAST results are available for this feature:

BLAST of HG10016104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882208.1	1.4e-123	85.61	uncharacterized protein LOC120073430 [Benincasa hispida]	[more]
XP_008441084.1	4.6e-114	81.65	PREDICTED: uncharacterized protein LOC103485312 [Cucumis melo] >KAA0052709.1 put...	[more]
XP_011658203.1	1.5e-112	80.94	uncharacterized protein LOC105435961 [Cucumis sativus] >KGN49202.1 hypothetical ...	[more]
XP_022926404.1	1.7e-87	66.78	uncharacterized protein LOC111433567 [Cucurbita moschata]	[more]
KAG7026590.1	2.2e-87	66.78	hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of HG10016104 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10016104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNI1	2.3e-114	81.65	Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var...	[more]
A0A1S3B2L5	2.3e-114	81.65	uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=...	[more]
A0A0A0KLE9	7.2e-113	80.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1	[more]
A0A6J1EF08	8.1e-88	66.78	uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC1114335...	[more]
A0A6J1CMA7	8.7e-50	63.21	uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of HG10016104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61170.1	8.4e-13	30.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G11125.1	3.1e-07	28.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR33871	OS05G0503100 PROTEIN-RELATED	coord: 1..278
None	No IPR available	PANTHER	PTHR33871:SF1	OS05G0503100 PROTEIN	coord: 1..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10016104.1	HG10016104.1	mRNA