HG10016008 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCAAAACTCTAATGGCTTGGACTGGTTTGGGAATGTCTTCAAGAAAATGGAGGACATGTGCTTGGAGATGCGTGCTGTCTTGGAGAAGGTAAAACTACTATCTCTTATTCATATAGTTTCAGAATTCCCCAACTCTTTGGCTAGCACTGTCGTTCTTAAAAATTGGTAACTCAACCCCACATTCTTAAACAGGAAGTGTTGAAATATGTAAACAGGCAACCAAATTCGGTTGGTATTTATGAAGATCACTTCCATCAGCCACATTTGGATGTTGGAGAAGATCAGTCTCCTGAGAAGGAGCATTGGGCAAATCAAAATGCATCTTCTGCAGGTGCTCTTGGTAAATCTCCAGGTAATTCTTATTGTAATTTATGAAATGGGTCTTGCTCTTGGTTTTCTGCACCAGCTATATGGTGATGATTTCCTTATTTGGGCTCTTTTCTGTGGTTCAGAAAACCCTATCCCACTAATAGCATTATTATTTTCTAAAACAATATTACAATGCAAATAAAGAAAAAAGGAATTCAAATCCATAAAAGGATAAGAGACGTGGATGTTTGACAATTTAAATTAGGCTTAAGTTGCAACAATTGCATCATTTACTTTTGCAAATTGAAATGTGACATTTTCAGTGAAAAGATGCAATTATTGTTGTGGGTTCTCTTTCCTGGAACGTGCAAATGTGGATGATAATGTGGGTTCAAGTTCAATGAAAAATGCAGTCATATTATCTTATATTCTTAAGCAGTGAAAATTTTACTTACCAGATTAGACAATGTTAGGATTTCCCGAAAGAATCAGGATTTCAGATGCTTCTATGGTCATATTTTTAATTCTTGGGTGTCATTTCCTGTCAAGAAAAGAAGATACAGGCACAAGATATAACCCTGTAAATGGACATCCATTAGCTTCGGAGAAATAAGAAAAAGGGCAATAATATGTGCTTTTGTCACATCATTCATTTAATTGCATCCTACTATTACAGGGCAGCATCCTGTCAAGACAGAAGATCGAGTTACAATTCAATCATCTGACAAACAGAATCATCCTATTATTGAACCAAACCATTTCTCAGCTAACCAAGAAGTATGTGGAGCTCTCAAGGTATTATCATTACCATCTAAGTATGCATGCAAGCACAAGTGTGTGAAATTTGGTGGTGCTTGGATGTTACATGATATTCCAGAAAGAAGCTGGTTCTGCCAAATTTGAAATCAAAATAGATTGTTTATAGACTTCAAGAATGCTTAACTTTATGCTCTTACCAACGCATGGCACCAACTCATTTTTCTTGCCCTCTTGACATTCTTTCAGATTGAAAACAAGAATGCTAAAGTGAATATATCAAGGCCAGCAAGGAAGCAGAGCCAAAAAGCAAATGCAATTACCGAAGAAATAATAAAGTTTCCTCCATCCACCATTCAAAATGATGAATTCCCCGACTGGGAGATTATTTAG ATGGGGCAAAACTCTAATGGCTTGGACTGGTTTGGGAATGTCTTCAAGAAAATGGAGGACATGTGCTTGGAGATGCGTGCTGTCTTGGAGAAGGAAGTGTTGAAATATGTAAACAGGCAACCAAATTCGGTTGGTATTTATGAAGATCACTTCCATCAGCCACATTTGGATGTTGGAGAAGATCAGTCTCCTGAGAAGGAGCATTGGGCAAATCAAAATGCATCTTCTGCAGGTGCTCTTGGTAAATCTCCAGGGCAGCATCCTGTCAAGACAGAAGATCGAGTTACAATTCAATCATCTGACAAACAGAATCATCCTATTATTGAACCAAACCATTTCTCAGCTAACCAAGAAGTATGTGGAGCTCTCAAGATTGAAAACAAGAATGCTAAAGTGAATATATCAAGGCCAGCAAGGAAGCAGAGCCAAAAAGCAAATGCAATTACCGAAGAAATAATAAAGTTTCCTCCATCCACCATTCAAAATGATGAATTCCCCGACTGGGAGATTATTTAG ATGGGGCAAAACTCTAATGGCTTGGACTGGTTTGGGAATGTCTTCAAGAAAATGGAGGACATGTGCTTGGAGATGCGTGCTGTCTTGGAGAAGGAAGTGTTGAAATATGTAAACAGGCAACCAAATTCGGTTGGTATTTATGAAGATCACTTCCATCAGCCACATTTGGATGTTGGAGAAGATCAGTCTCCTGAGAAGGAGCATTGGGCAAATCAAAATGCATCTTCTGCAGGTGCTCTTGGTAAATCTCCAGGGCAGCATCCTGTCAAGACAGAAGATCGAGTTACAATTCAATCATCTGACAAACAGAATCATCCTATTATTGAACCAAACCATTTCTCAGCTAACCAAGAAGTATGTGGAGCTCTCAAGATTGAAAACAAGAATGCTAAAGTGAATATATCAAGGCCAGCAAGGAAGCAGAGCCAAAAAGCAAATGCAATTACCGAAGAAATAATAAAGTTTCCTCCATCCACCATTCAAAATGATGAATTCCCCGACTGGGAGATTATTTAG MGQNSNGLDWFGNVFKKMEDMCLEMRAVLEKEVLKYVNRQPNSVGIYEDHFHQPHLDVGEDQSPEKEHWANQNASSAGALGKSPGQHPVKTEDRVTIQSSDKQNHPIIEPNHFSANQEVCGALKIENKNAKVNISRPARKQSQKANAITEEIIKFPPSTIQNDEFPDWEII Homology
BLAST of HG10016008 vs. NCBI nr
Match: XP_023544557.1 (uncharacterized protein LOC111804099 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65 Identity = 132/171 (77.19%), Postives = 143/171 (83.63%), Query Frame = 0
BLAST of HG10016008 vs. NCBI nr
Match: XP_038883790.1 (uncharacterized protein LOC120074664 isoform X1 [Benincasa hispida] >XP_038883791.1 uncharacterized protein LOC120074664 isoform X1 [Benincasa hispida]) HSP 1 Score: 255.8 bits (652), Expect = 2.7e-64 Identity = 133/171 (77.78%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of HG10016008 vs. NCBI nr
Match: XP_022925761.1 (uncharacterized protein LOC111433073 isoform X1 [Cucurbita moschata]) HSP 1 Score: 251.5 bits (641), Expect = 5.1e-63 Identity = 130/171 (76.02%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of HG10016008 vs. NCBI nr
Match: KAG7034640.1 (hypothetical protein SDJN02_04370 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 246.9 bits (629), Expect = 1.3e-61 Identity = 130/172 (75.58%), Postives = 140/172 (81.40%), Query Frame = 0
BLAST of HG10016008 vs. NCBI nr
Match: XP_023544558.1 (uncharacterized protein LOC111804099 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60 Identity = 129/171 (75.44%), Postives = 138/171 (80.70%), Query Frame = 0
BLAST of HG10016008 vs. ExPASy TrEMBL
Match: A0A6J1ED31 (uncharacterized protein LOC111433073 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433073 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.5e-63 Identity = 130/171 (76.02%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of HG10016008 vs. ExPASy TrEMBL
Match: A0A0A0KKC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519520 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60 Identity = 129/171 (75.44%), Postives = 137/171 (80.12%), Query Frame = 0
BLAST of HG10016008 vs. ExPASy TrEMBL
Match: A0A6J1ECJ4 (uncharacterized protein LOC111433073 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433073 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 7.5e-60 Identity = 128/171 (74.85%), Postives = 136/171 (79.53%), Query Frame = 0
BLAST of HG10016008 vs. ExPASy TrEMBL
Match: A0A6J1EG60 (uncharacterized protein LOC111433073 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111433073 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 2.1e-54 Identity = 116/156 (74.36%), Postives = 127/156 (81.41%), Query Frame = 0
BLAST of HG10016008 vs. ExPASy TrEMBL
Match: A0A5A7UFX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002340 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 5.1e-24 Identity = 62/83 (74.70%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of HG10016008 vs. TAIR 10
Match: AT2G31130.1 (unknown protein; Has 116 Blast hits to 113 proteins in 44 species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 6.8e-05 Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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