HG10015964 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCGTGATTTGATAAATTACTGCTTTATGATTTGTAGCATTGTTTTGATGTTAGCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGGTCCTAACCAGACCCTAACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGCTTTGTTTGGGAATTCAAGGAGAATTTGATATCAACCACCCTTTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGTGATTGGCTTGCTTCCAGGTGCAATTTTAGGTTTTGCCTTTGGATTGCTCGAACTTCAGGCATTTATATTCAAAACATTGCTCAAGGTTCTATGGATCTGGTTCATACTTGGGAACACTAG ATGGGTCGTGATTTGATAAATTACTGCTTTATGATTTGTAGCATTGTTTTGATGTTAGCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGGTCCTAACCAGACCCTAACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGCTTTGTTTGGGAATTCAAGGAGAATTTGATATCAACCACCCTTTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGTGATTGGCTTGCTTCCAGGTGCAATTTTAGGTTTTGCCTTTGGATTGCTCGAACTTCAGGCATTTATATTCAAAACATTGCTCAAGGTTCTATGGATCTGGTTCATACTTGGGAACACTAG ATGGGTCGTGATTTGATAAATTACTGCTTTATGATTTGTAGCATTGTTTTGATGTTAGCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGGTCCTAACCAGACCCTAACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGCTTTGTTTGGGAATTCAAGGAGAATTTGATATCAACCACCCTTTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGTGATTGGCTTGCTTCCAGGTGCAATTTTAGGTTTTGCCTTTGGATTGCTCGAACTTCAGGCATTTATATTCAAAACATTGCTCAAGGTTCTATGGATCTGGTTCATACTTGGGAACACTAG MGRDLINYCFMICSIVLMLAIGGGMPCSSASLRGSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGDWLASRCNFRFCLWIARTSGIYIQNIAQGSMDLVHTWEH Homology
BLAST of HG10015964 vs. NCBI nr
Match: KAA0052584.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK13240.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32 Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 0
BLAST of HG10015964 vs. NCBI nr
Match: KAE8648119.1 (hypothetical protein Csa_004728 [Cucumis sativus]) HSP 1 Score: 144.4 bits (363), Expect = 8.1e-31 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 0
BLAST of HG10015964 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-30 Identity = 70/153 (45.75%), Postives = 86/153 (56.21%), Query Frame = 0
BLAST of HG10015964 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-30 Identity = 70/153 (45.75%), Postives = 86/153 (56.21%), Query Frame = 0
BLAST of HG10015964 vs. NCBI nr
Match: KAG7034676.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.9 bits (359), Expect = 2.4e-30 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20 Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.2e-18 Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.7e-12 Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09 Identity = 47/137 (34.31%), Postives = 69/137 (50.36%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy TrEMBL
Match: A0A5A7UB41 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008560 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 7.1e-33 Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy TrEMBL
Match: A0A5E4EKH7 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B010815 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.6e-27 Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.6e-27 Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy TrEMBL
Match: A0A6J5VTZ1 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.4e-27 Identity = 62/153 (40.52%), Postives = 87/153 (56.86%), Query Frame = 0
BLAST of HG10015964 vs. ExPASy TrEMBL
Match: A0A314XJ22 (S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_22175 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.4e-27 Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 0
BLAST of HG10015964 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 101.3 bits (251), Expect = 7.3e-22 Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of HG10015964 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.0 bits (227), Expect = 4.4e-19 Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of HG10015964 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 72.0 bits (175), Expect = 4.8e-13 Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of HG10015964 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 0
BLAST of HG10015964 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11 Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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