HG10015915 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015915
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein kinase superfamily protein
Location	Chr03: 1392366 .. 1392710 (+)
RNA-Seq Expression	HG10015915
Synteny	HG10015915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCCCCAATCGCTTTAGGAAAAACTGGTCTCCCCAGTCGCCGTTCCTGAACCAGCCTTTGGGTCTGAGTGAACCGGCAAGCGTAGCTGGCGGTGCCGTCATTGATGGTCACAGCGTGAACCATTCCATCGCCATCGAAGAGATGGTGTCCGGCAGTTGGCTCAAAGAGAGGATTGGCGCCGTTCCGAAGGTAAACGCCGTTAATGCAATCCGGGATGGTTCCGATAACGGGGAGGTTATGTTTAACAGGTTGTTCTGGGACGGGAGCGAAATTGCCAGAGATTTGGACACGTGGGTCGGCGGTTTTAGGGAGTGGATGTTGAAGCTCGTGAGAAACTAA

mRNA sequence

ATGGAGTTCCCCAATCGCTTTAGGAAAAACTGGTCTCCCCAGTCGCCGTTCCTGAACCAGCCTTTGGGTCTGAGTGAACCGGCAAGCGTAGCTGGCGGTGCCGTCATTGATGGTCACAGCGTGAACCATTCCATCGCCATCGAAGAGATGGTGTCCGGCAGTTGGCTCAAAGAGAGGATTGGCGCCGTTCCGAAGGTAAACGCCGTTAATGCAATCCGGGATGGTTCCGATAACGGGGAGGTTATGTTTAACAGGTTGTTCTGGGACGGGAGCGAAATTGCCAGAGATTTGGACACGTGGGTCGGCGGTTTTAGGGAGTGGATGTTGAAGCTCGTGAGAAACTAA

Coding sequence (CDS)

ATGGAGTTCCCCAATCGCTTTAGGAAAAACTGGTCTCCCCAGTCGCCGTTCCTGAACCAGCCTTTGGGTCTGAGTGAACCGGCAAGCGTAGCTGGCGGTGCCGTCATTGATGGTCACAGCGTGAACCATTCCATCGCCATCGAAGAGATGGTGTCCGGCAGTTGGCTCAAAGAGAGGATTGGCGCCGTTCCGAAGGTAAACGCCGTTAATGCAATCCGGGATGGTTCCGATAACGGGGAGGTTATGTTTAACAGGTTGTTCTGGGACGGGAGCGAAATTGCCAGAGATTTGGACACGTGGGTCGGCGGTTTTAGGGAGTGGATGTTGAAGCTCGTGAGAAACTAA

Protein sequence

MEFPNRFRKNWSPQSPFLNQPLGLSEPASVAGGAVIDGHSVNHSIAIEEMVSGSWLKERIGAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVGGFREWMLKLVRN

Homology

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BLAST of HG10015915 vs. NCBI nr
Match: KAF7822530.1 (Uncharacterized protein G2W53_020674 [Senna tora])

HSP 1 Score: 94.0 bits (232), Expect = 9.1e-16
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 7   FRKNWSPQSPFLNQPLGLSEPASVAGGAVIDGHSVNHSIAIEEMVSGSWLKERIGAVPKV 66
           F ++ + QS FL++ L   E A VAGGAV +   V+H++A+EE+V+G  L ER+G+V  V
Sbjct: 290 FGEDGATQSFFLDETLRFGESAGVAGGAVFELDGVDHAVAVEEVVAGDGLVERVGSVADV 349

Query: 67  NAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVGGFREWMLKLVRN 115
           + +NA  D S + E + + L    SE++ DLDTWVGG  +W+L LV N
Sbjct: 350 DTLNAFGDFSGDREGVGDGLLRHRSEVSGDLDTWVGGLGKWVLTLVGN 397

[Close]

BLAST of HG10015915 vs. NCBI nr
Match: RHN74679.1 (hypothetical protein MtrunA17_Chr2g0312961 [Medicago truncatula])

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 1   MEFPNRFRKNWSPQSPFLNQPLGLSEPASVAGGAVIDGHSVNHSIAIEEMVSGSWLKERI 60
           M+F   F KN   Q  FL Q +G  E A V  GAV + + V+H++++EE+V+G WL + I
Sbjct: 3   MKFTYGFWKNGPAQGFFLGQTVGFGEAARVTYGAVCEFNGVDHTVSVEEVVTGYWLVKWI 62

Query: 61  GAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVGGF 105
           GAV +VN VN   D + N + +  R+F    E+  +L+TWVGGF
Sbjct: 63  GAVTEVNTVNVGWDFAGNWKRLGYRVFRYWGEVTGNLNTWVGGF 106

[Close]

BLAST of HG10015915 vs. NCBI nr
Match: GER45101.1 (protein kinase superfamily protein [Striga asiatica])

HSP 1 Score: 77.8 bits (190), Expect = 6.8e-11
Identity = 38/103 (36.89%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 1   MEFPNRFRKNWSPQSPFLNQPLGLSEPASV-AGGAVIDGHSVNHSIAIEEMVSGSWLKER 60
           +E  + F ++ + +   L + +GL E A V  GG V++G  V+H++++EE+V+G  L+E 
Sbjct: 203 VELADGFGEDGAAEGELLGEAVGLGEAAGVGGGGGVVEGDGVDHAVSVEEVVAGEGLEEG 262

Query: 61  IGAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVG 103
           +GAV +V+A + + D + +GE + + L  DG E+A DLD  VG
Sbjct: 263 VGAVAEVDAADGVGDLAGDGEGVADGLLGDGGEVAGDLDVGVG 305

[Close]

BLAST of HG10015915 vs. NCBI nr
Match: KAF7063222.1 (hypothetical protein CFC21_069743 [Triticum aestivum])

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-09
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 1   MEFPNRFRKNWSPQSPFLNQPLGLSEPASVA-GGAVIDGHSVNHSIAIEEMVSGSWLKER 60
           +E  N  R+N  P    L +  GL E A V  GGAV D   V+H++A+EE+V G  L+  
Sbjct: 399 VELANGLRENRPPNGALLGEAGGLGEAAGVGLGGAVADADGVDHAVAVEEVVPGRGLEAG 458

Query: 61  IGAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVGGFRE 107
           +GAV  V+AV+  RD + + E     L  DG E+A DL   VG  R+
Sbjct: 459 VGAVACVDAVDEGRDAAGDRERAHGGLLADGGEVAGDLHGGVGRARQ 505

[Close]

BLAST of HG10015915 vs. NCBI nr
Match: KAB8104358.1 (hypothetical protein EE612_037210, partial [Oryza sativa] >BAT00113.1 Os07g0154201, partial [Oryza sativa Japonica Group])

HSP 1 Score: 57.4 bits (137), Expect = 9.4e-05
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 16  PFLNQPLGLSEPASVAGGAVI-DGHSVNHSIAIEEMVSGSWLKERIGAVPKVNAVNAIRD 75
           P L QP  L EPA V  GA   + H V H +A+E++V G+   ER+GAV  V+ V A R+
Sbjct: 85  PLLPQPRRLREPARVRLGAPPGEPHGVQHPVAVEQVVPGARRVERVGAVADVHPVEARRE 144

Query: 76  GSDNGEVMFNRLFWDGSEIARDLDTWVGGFRE 107
            + + +    R   DG  +  DL   + G R+
Sbjct: 145 AAGHRQPPHRRALPDGRVVPGDLHGRISGARQ 176

[Close]

BLAST of HG10015915 vs. ExPASy TrEMBL
Match: A0A396J8V1 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr2g0312961 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.8e-13
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 1   MEFPNRFRKNWSPQSPFLNQPLGLSEPASVAGGAVIDGHSVNHSIAIEEMVSGSWLKERI 60
           M+F   F KN   Q  FL Q +G  E A V  GAV + + V+H++++EE+V+G WL + I
Sbjct: 3   MKFTYGFWKNGPAQGFFLGQTVGFGEAARVTYGAVCEFNGVDHTVSVEEVVTGYWLVKWI 62

Query: 61  GAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVGGF 105
           GAV +VN VN   D + N + +  R+F    E+  +L+TWVGGF
Sbjct: 63  GAVTEVNTVNVGWDFAGNWKRLGYRVFRYWGEVTGNLNTWVGGF 106

[Close]

BLAST of HG10015915 vs. ExPASy TrEMBL
Match: A0A5A7QMI0 (Protein kinase superfamily protein OS=Striga asiatica OX=4170 GN=STAS_22027 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.3e-11
Identity = 38/103 (36.89%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 1   MEFPNRFRKNWSPQSPFLNQPLGLSEPASV-AGGAVIDGHSVNHSIAIEEMVSGSWLKER 60
           +E  + F ++ + +   L + +GL E A V  GG V++G  V+H++++EE+V+G  L+E 
Sbjct: 203 VELADGFGEDGAAEGELLGEAVGLGEAAGVGGGGGVVEGDGVDHAVSVEEVVAGEGLEEG 262

Query: 61  IGAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVG 103
           +GAV +V+A + + D + +GE + + L  DG E+A DLD  VG
Sbjct: 263 VGAVAEVDAADGVGDLAGDGEGVADGLLGDGGEVAGDLDVGVG 305

[Close]

BLAST of HG10015915 vs. ExPASy TrEMBL
Match: A0A3B6LFQ5 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 8.1e-10
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 1   MEFPNRFRKNWSPQSPFLNQPLGLSEPASVA-GGAVIDGHSVNHSIAIEEMVSGSWLKER 60
           +E  N  R+N  P    L +  GL E A V  GGAV D   V+H++A+EE+V G  L+  
Sbjct: 399 VELANGLRENRPPNGALLGEAGGLGEAAGVGLGGAVADADGVDHAVAVEEVVPGRGLEAG 458

Query: 61  IGAVPKVNAVNAIRDGSDNGEVMFNRLFWDGSEIARDLDTWVGGFRE 107
           +GAV  V+AV+  RD + + E     L  DG E+A DL   VG  R+
Sbjct: 459 VGAVACVDAVDEGRDAAGDRERAHGGLLADGGEVAGDLHGGVGRARQ 505

[Close]

BLAST of HG10015915 vs. ExPASy TrEMBL
Match: A0A0P0X2F2 (Os07g0154201 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0154201 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.6e-05
Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 16  PFLNQPLGLSEPASVAGGAVI-DGHSVNHSIAIEEMVSGSWLKERIGAVPKVNAVNAIRD 75
           P L QP  L EPA V  GA   + H V H +A+E++V G+   ER+GAV  V+ V A R+
Sbjct: 85  PLLPQPRRLREPARVRLGAPPGEPHGVQHPVAVEQVVPGARRVERVGAVADVHPVEARRE 144

Query: 76  GSDNGEVMFNRLFWDGSEIARDLDTWVGGFRE 107
            + + +    R   DG  +  DL   + G R+
Sbjct: 145 AAGHRQPPHRRALPDGRVVPGDLHGRISGARQ 176

[Close]

BLAST of HG10015915 vs. ExPASy TrEMBL
Match: A0A371GFN1 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28962 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-04
Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 22  LGLSEPASVAGGAVIDGHSVNHSIAIEEMVSGSWLKERIGAVPKVNAVNAIRDGSDNGEV 81
           LG    A+  G A+ D   V H++ IE++V  +  + R+G V  V AV A RDG+ +   
Sbjct: 43  LGFDVAAAECGFALGDAECVEHAVTIEDVVGSTREELRVGPVSDVRAVEARRDGAFHDFA 102

Query: 82  MFNRLFWDGSEIARDLDTWVGGFR 106
           +  R F DG E+ R+  +WV   R
Sbjct: 103 LRGREFIDGGEVLREHVSWVHSTR 126

The following BLAST results are available for this feature:

BLAST of HG10015915 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7822530.1	9.1e-16	44.44	Uncharacterized protein G2W53_020674 [Senna tora]	[more]
RHN74679.1	1.6e-12	42.31	hypothetical protein MtrunA17_Chr2g0312961 [Medicago truncatula]	[more]
GER45101.1	6.8e-11	36.89	protein kinase superfamily protein [Striga asiatica]	[more]
KAF7063222.1	1.7e-09	40.19	hypothetical protein CFC21_069743 [Triticum aestivum]	[more]
KAB8104358.1	9.4e-05	36.96	hypothetical protein EE612_037210, partial [Oryza sativa] >BAT00113.1 Os07g01542...	[more]

BLAST of HG10015915 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10015915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A396J8V1	7.8e-13	42.31	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr2g0312961 ...	[more]
A0A5A7QMI0	3.3e-11	36.89	Protein kinase superfamily protein OS=Striga asiatica OX=4170 GN=STAS_22027 PE=4...	[more]
A0A3B6LFQ5	8.1e-10	40.19	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1	[more]
A0A0P0X2F2	4.6e-05	36.96	Os07g0154201 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]
A0A371GFN1	3.0e-04	35.71	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28962 P...	[more]

BLAST of HG10015915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015915.1	HG10015915.1	mRNA