HG10015816 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015816
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Vacuolar protein sorting-associated protein 2-like protein 2
Location	Chr03: 543659 .. 546254 (+)
RNA-Seq Expression	HG10015816
Synteny	HG10015816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGATTTACTTCTACTACTAAGGGAACTTTAGTTGCCTGGGGTGCGGTTAATGCAGAAATTCAATGCGGATTGATTAGATTAGACATGAACAATGACATTGTGCTTTTATTACAGATGCTCTTCGCACCAGCAAGCGAGAAATGGCTGTTGCAACTAGAGGTACTACAAACCTTCTACTTAACAGTTTTTGGATGCCTCTGTTTCTATATCTTTAAATATCCTCAGGGTATGGGCCAAATCATCTGTAGTTATTGTGCCACTTAAGGGACTTCAAAACCCAACCATACTCCCTTTAGTTCAGCTCCTCACTCTATTATGTCGTTCACTTTTCTTTCCTACCTTAGTTATATAGAGGCGATCTTTACCAAAATAAGCAATTGACCAAAATTAGAATAACCATTCTGTTCAACTGCCTAGCCATACTTTAAATGTATGTAAATGCACATACATGGTACTGGTAATTGTGGCATTTGTGGAATAAGTTTTGCAAGTAAAAAGGTCTGTGAGTTGAGGACCAAAATTCCCTTTACTTGCCTTGTTCTTTCGTCAACTTTCATTACTACTTCATCAGTAAGATACAGACCTGACGTTTTATTTTCTCATGGTGTAGAATCTTCAATTAGTACATTCAATCCTTCTCCGTCCTTGAATTTACATTTTTATGAAATTCATATGTTTGTGGCTTATACGTTTATCAATTTTTAGGCATTGAACGAGAAATTGCATCTCTTCAGTTGGAGGTATGATGTGAACTCCCTTTTGGTTTTCATTTCTATTACCACCTTTGTCTTTCCTCTTCTTTTAGATTTCCCTACTCTTTCTAATTTCAGGAAAAAAAATTGGTGGCAGAGATAAAGCAAACTGCCAAAACTGGGAATGAGGCAAGTTAACTTTTTATATCCATTGATGGTAGATATAACCTTATATTTAGTAATTTGTCCCTTCACAACTGTCCAACCATCTTAATCTTATTTATGGATTGTTCCATTAGTTATTCATGATTCTAAAACTTCAAACTATTTGCAGTTTTCCTGGGCTTTCTATGTAATTAATTTTTTTCTTTACCTTCATGATTACTGGTTGGTTTGATATTTTGGTTTCCATGCAGTTGAGTCACTCAACTTGAGTGCTTCATATTTTCCCTCGACTGCAATTCTATGCAAATTGCACCTAGTGAAATTGCATTAAAGAAGACAAAAAATGTTGAGGTGGCAGCAAAGGAATTTAGAATCCGATGTTCCCATTTATTCAGAAATAAATTCAATGTAGATTGTGGATTACTGTTGATAGTCATCTTGAGCAGGAGCACACACAACATAAATACTTTTTTCACCTAAGTAGGATCCTATTGTTAGGGAGTAAACATGTTTTCATTCTTCATTTTTCCTTTTAATTTAACATACAGGCTGCCACTAGAATCCTAGCTCGACAGCTTGTTCGCCTACGCCAACAGATAACTAATTTGCAAGGGAGTCGTGCCCAAATTCGAGGTGTAGCTACTCATACACAGGTCGCCATCCTTACTGTGGAAACGTGTTGACCTTCTGTTTTAGTTTAGTGAAAATGATTGGCTAATGTTGTCTTTTTCCAGGCATTATATGCTAGCACTTCAATCTCTACTGGAATGAAGGGTGCAACAAAGGCAATGGTTGCAATGAACAAGGTAAGCCCACGAAAGAGAATATGATAGCCTTAATTTTATTATGATTCTACTATTTTAAAGGAAGAACGAGACACACTAGCAGAGAACTGGAAGTTACTTGATTAAAGTTTTTGATTGATGTGTCATATTGGTTTACATAATTGACTGAAATTTGATGTGAGAGTAAAATTAGTTGACTTTTTTTTTAAACTAACATATAGGCTACTTTACATGGAAACTTGTTAGTTTGTATATCATATAACCAAACGTTCAATTTTATCATCTTAGCTTTCCGTTGCAGCAAATGGCACCAGTTAAGCAGGCTAAAGTGATTAAGGAGTTTCAGAAGCAGTCGGCACAGTTGGACATGACGGTAACATTCCAAGTTTCACCTTTTTTTTTTTGGATGAAAACAACCCGACTATTATTGTATCCCTCGAGCTAGTAGATTTTTCTTTTTTCTTTATCCACTCGTGCAATATGTTTTCTTACTTCTTTTCTCCAGATTGAAATGATGTCAGAGTCTATAGATGAAACTTTAGATAAGGATGAGGCGGAAGAGGAGACTGAGGAACTTACGAATCAGGTAAATTCTTGCAACATATTTAAGGTGGGTTGCATACCCTATACGTTGAATGATTTTACTAACTAGATATTTGTTTTGTTGTTCTCTTCATAGGTGCTTGATGAGATTGGCGTTGATATTGCATCTCAGGTTGGTCTCTTGAAAATGAACGTTTTGCTTGAATCTCAAATATGTTTTCATTTTTTCTTTTCTTCATTTGGAAAAAATTATTGCTCTCTGACATTGCTTTTTCCTGTTGACAGTTATCTTCTGCTCCCAAAGGCCGGATTGCAGCAAGAAAGACTGAAAATACAGTTACCAGGTACCCTACGCATTACTATTGGGATTTTTCTCTCTGGTATATTACATTTTATAACATACACTGA

mRNA sequence

ATGCGATTTACTTCTACTACTAAGGGAACTTTAGTTGCCTGGGGTGCGGTTAATGCAGAAATTCAATGCGGATTGATTAGATTAGACATGAACAATGACATTGTGCTTTTATTACAGATGCTCTTCGCACCAGCAAGCGAGAAATGGCTGTTGCAACTAGAGGCTGCCACTAGAATCCTAGCTCGACAGCTTGTTCGCCTACGCCAACAGATAACTAATTTGCAAGGGAGTCGTGCCCAAATTCGAGGTGTAGCTACTCATACACAGGCATTATATGCTAGCACTTCAATCTCTACTGGAATGAAGGGTGCAACAAAGGCAATGGTTGCAATGAACAAGATTGAAATGATGTCAGAGTCTATAGATGAAACTTTAGATAAGGATGAGGCGGAAGAGGAGACTGAGGAACTTACGAATCAGGTGCTTGATGAGATTGGCGTTGATATTGCATCTCAGTTATCTTCTGCTCCCAAAGGCCGGATTGCAGCAAGAAAGACTGAAAATACAGTTACCAGGTACCCTACGCATTACTATTGGGATTTTTCTCTCTGGTATATTACATTTTATAACATACACTGA

Coding sequence (CDS)

ATGCGATTTACTTCTACTACTAAGGGAACTTTAGTTGCCTGGGGTGCGGTTAATGCAGAAATTCAATGCGGATTGATTAGATTAGACATGAACAATGACATTGTGCTTTTATTACAGATGCTCTTCGCACCAGCAAGCGAGAAATGGCTGTTGCAACTAGAGGCTGCCACTAGAATCCTAGCTCGACAGCTTGTTCGCCTACGCCAACAGATAACTAATTTGCAAGGGAGTCGTGCCCAAATTCGAGGTGTAGCTACTCATACACAGGCATTATATGCTAGCACTTCAATCTCTACTGGAATGAAGGGTGCAACAAAGGCAATGGTTGCAATGAACAAGATTGAAATGATGTCAGAGTCTATAGATGAAACTTTAGATAAGGATGAGGCGGAAGAGGAGACTGAGGAACTTACGAATCAGGTGCTTGATGAGATTGGCGTTGATATTGCATCTCAGTTATCTTCTGCTCCCAAAGGCCGGATTGCAGCAAGAAAGACTGAAAATACAGTTACCAGGTACCCTACGCATTACTATTGGGATTTTTCTCTCTGGTATATTACATTTTATAACATACACTGA

Protein sequence

MRFTSTTKGTLVAWGAVNAEIQCGLIRLDMNNDIVLLLQMLFAPASEKWLLQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAARKTENTVTRYPTHYYWDFSLWYITFYNIH

Homology

[Close]

BLAST of HG10015816 vs. NCBI nr
Match: KAA0052452.1 (vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-49
Identity = 124/153 (81.05%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 122 EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 181

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 173
                                   IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 182 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 241

Query: 174 ASQLSSAPKGRIAARKTENTVTRYPTHYYWDFS 183
           ASQLSSAPKGRIAARKTENTV RYP   Y DFS
Sbjct: 242 ASQLSSAPKGRIAARKTENTVARYPIVPYLDFS 274

[Close]

BLAST of HG10015816 vs. NCBI nr
Match: RYR67182.1 (hypothetical protein Ahy_A03g013486 [Arachis hypogaea])

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-48
Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 51  LQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVA 110
           LQ+EAAT+ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAM A
Sbjct: 35  LQMEAATKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMAA 94

Query: 111 MNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAARKTENTV 170
           MNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA+R TEN  
Sbjct: 95  MNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVS 154

Query: 171 TRYP 175
              P
Sbjct: 155 PSRP 158

[Close]

BLAST of HG10015816 vs. NCBI nr
Match: THG17471.1 (hypothetical protein TEA_006861 [Camellia sinensis var. sinensis])

HSP 1 Score: 201.4 bits (511), Expect = 6.8e-48
Identity = 112/122 (91.80%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 76  QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 135

Query: 114 IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAARKTENTVTRY 173
           IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA++K E+ V   
Sbjct: 136 IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASKKVESVVPST 195

Query: 174 PT 176
           P+
Sbjct: 196 PS 197

[Close]

BLAST of HG10015816 vs. NCBI nr
Match: KAF4359848.1 (hypothetical protein G4B88_020369 [Cannabis sativa])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 45  ASEKWLLQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 104
           A   ++L L+AAT+ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA
Sbjct: 50  AKPVYVLLLQAATKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 109

Query: 105 TKAMVAMNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAAR 164
           TKAMVAMNKIEMMSE+IDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA+R
Sbjct: 110 TKAMVAMNKIEMMSEAIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASR 169

Query: 165 KTEN 169
             EN
Sbjct: 170 NAEN 173

[Close]

BLAST of HG10015816 vs. NCBI nr
Match: KAF4348598.1 (hypothetical protein G4B88_024076 [Cannabis sativa] >KAF4349419.1 hypothetical protein F8388_021002 [Cannabis sativa])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 45  ASEKWLLQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 104
           A   ++L L+AAT+ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA
Sbjct: 79  AKPVYVLLLQAATKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 138

Query: 105 TKAMVAMNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAAR 164
           TKAMVAMNKIEMMSE+IDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA+R
Sbjct: 139 TKAMVAMNKIEMMSEAIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASR 198

Query: 165 KTEN 169
             EN
Sbjct: 199 NAEN 202

[Close]

BLAST of HG10015816 vs. ExPASy Swiss-Prot
Match: Q0WTY4 (Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS2.2 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 9.9e-42
Identity = 102/135 (75.56%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           EAAT+ILARQLVRLRQQITNLQGSRAQIRGV THTQALYASTSIS+GMKGATKAMVAMNK
Sbjct: 55  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 114

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 165
                                   IEMMSE+IDETLDKDEAEEETE+LTNQVLDEIGV +
Sbjct: 115 QMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGV 174

[Close]

BLAST of HG10015816 vs. ExPASy Swiss-Prot
Match: Q941D5 (Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=VPS2.3 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-36
Identity = 86/139 (61.87%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           E AT+ILARQL+RLRQQI NLQGSRAQ+RG+ATHTQA++A TS++ GM+GATKAM AM+K
Sbjct: 55  EGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSK 114

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 169
                                    EMMS+SID+ LD DEAE+ETE+LTNQVLDEIG+DI
Sbjct: 115 NMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDI 174

[Close]

BLAST of HG10015816 vs. ExPASy Swiss-Prot
Match: Q9SKI2 (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS2.1 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 56  ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMN--- 115
           A +++A+ L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN   
Sbjct: 59  AVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 118

Query: 116 -----------------KIEMMSE----SIDETLDKDEAEEETEELTNQVLDEIGVDIAS 173
                            K+EM+SE    +ID+ L+ DE EEETE+L +QVLDEIG+DI  
Sbjct: 119 NLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQ 178

[Close]

BLAST of HG10015816 vs. ExPASy Swiss-Prot
Match: Q54DB1 (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=44689 GN=chmp2a2 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 56  ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMN--- 115
           + +I+A+ LVR R  I      + Q++ V+   Q L ++ +++  MKG TKAM+ MN   
Sbjct: 57  SAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQM 116

Query: 116 ---------------------KIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIAS 158
                                K EMM++++D+ +++D  EE+++E+ NQVLDEIG+D+AS
Sbjct: 117 NLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLAS 176

[Close]

BLAST of HG10015816 vs. ExPASy Swiss-Prot
Match: O43633 (Charged multivesicular body protein 2a OS=Homo sapiens OX=9606 GN=CHMP2A PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-09
Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 56  ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMN--- 115
           A RI+A+ LVR R+ +      RA I+ V+   Q L ++ S++  MKG TKAM  MN   
Sbjct: 58  AVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQL 117

Query: 116 ---------------------KIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIAS 158
                                K EMM+++ID+ +  +E EEE++ + +QVLDE+G+ +  
Sbjct: 118 KLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTD 177

[Close]

BLAST of HG10015816 vs. ExPASy TrEMBL
Match: A0A5A7U9M7 (Vacuolar protein sorting-associated protein 2-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00490 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.9e-50
Identity = 124/153 (81.05%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 122 EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 181

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 173
                                   IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI
Sbjct: 182 QMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 241

Query: 174 ASQLSSAPKGRIAARKTENTVTRYPTHYYWDFS 183
           ASQLSSAPKGRIAARKTENTV RYP   Y DFS
Sbjct: 242 ASQLSSAPKGRIAARKTENTVARYPIVPYLDFS 274

[Close]

BLAST of HG10015816 vs. ExPASy TrEMBL
Match: A0A445DVF5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g013486 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.7e-49
Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 51  LQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVA 110
           LQ+EAAT+ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAM A
Sbjct: 35  LQMEAATKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMAA 94

Query: 111 MNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAARKTENTV 170
           MNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA+R TEN  
Sbjct: 95  MNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVS 154

Query: 171 TRYP 175
              P
Sbjct: 155 PSRP 158

[Close]

BLAST of HG10015816 vs. ExPASy TrEMBL
Match: A0A4S4ELH2 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006861 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.3e-48
Identity = 112/122 (91.80%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           +AATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK
Sbjct: 76  QAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 135

Query: 114 IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAARKTENTVTRY 173
           IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA++K E+ V   
Sbjct: 136 IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASKKVESVVPST 195

Query: 174 PT 176
           P+
Sbjct: 196 PS 197

[Close]

BLAST of HG10015816 vs. ExPASy TrEMBL
Match: A0A7J6DR81 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_021002 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 45  ASEKWLLQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 104
           A   ++L L+AAT+ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA
Sbjct: 79  AKPVYVLLLQAATKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 138

Query: 105 TKAMVAMNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAAR 164
           TKAMVAMNKIEMMSE+IDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA+R
Sbjct: 139 TKAMVAMNKIEMMSEAIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASR 198

Query: 165 KTEN 169
             EN
Sbjct: 199 NAEN 202

[Close]

BLAST of HG10015816 vs. ExPASy TrEMBL
Match: A0A7J6EN65 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_020369 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 45  ASEKWLLQLEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 104
           A   ++L L+AAT+ILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA
Sbjct: 50  AKPVYVLLLQAATKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGA 109

Query: 105 TKAMVAMNKIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIAAR 164
           TKAMVAMNKIEMMSE+IDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIA+R
Sbjct: 110 TKAMVAMNKIEMMSEAIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASR 169

Query: 165 KTEN 169
             EN
Sbjct: 170 NAEN 173

[Close]

BLAST of HG10015816 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein )

HSP 1 Score: 171.4 bits (433), Expect = 7.0e-43
Identity = 102/135 (75.56%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           EAAT+ILARQLVRLRQQITNLQGSRAQIRGV THTQALYASTSIS+GMKGATKAMVAMNK
Sbjct: 55  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 114

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 165
                                   IEMMSE+IDETLDKDEAEEETE+LTNQVLDEIGV +
Sbjct: 115 QMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGV 174

[Close]

BLAST of HG10015816 vs. TAIR 10
Match: AT5G44560.2 (SNF7 family protein )

HSP 1 Score: 171.4 bits (433), Expect = 7.0e-43
Identity = 102/135 (75.56%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           EAAT+ILARQLVRLRQQITNLQGSRAQIRGV THTQALYASTSIS+GMKGATKAMVAMNK
Sbjct: 35  EAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNK 94

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 165
                                   IEMMSE+IDETLDKDEAEEETE+LTNQVLDEIGV +
Sbjct: 95  QMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGV 154

[Close]

BLAST of HG10015816 vs. TAIR 10
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3 )

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-37
Identity = 86/139 (61.87%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 54  EAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNK 113
           E AT+ILARQL+RLRQQI NLQGSRAQ+RG+ATHTQA++A TS++ GM+GATKAM AM+K
Sbjct: 55  EGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSK 114

Query: 114 ------------------------IEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDI 169
                                    EMMS+SID+ LD DEAE+ETE+LTNQVLDEIG+DI
Sbjct: 115 NMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDI 174

[Close]

BLAST of HG10015816 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein )

HSP 1 Score: 81.3 bits (199), Expect = 9.6e-16
Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 56  ATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMN--- 115
           A +++A+ L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN   
Sbjct: 59  AVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 118

Query: 116 -----------------KIEMMSE----SIDETLDKDEAEEETEELTNQVLDEIGVDIAS 173
                            K+EM+SE    +ID+ L+ DE EEETE+L +QVLDEIG+DI  
Sbjct: 119 NLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQ 178

The following BLAST results are available for this feature:

BLAST of HG10015816 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052452.1	1.6e-49	81.05	vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. ...	[more]
RYR67182.1	1.4e-48	91.94	hypothetical protein Ahy_A03g013486 [Arachis hypogaea]	[more]
THG17471.1	6.8e-48	91.80	hypothetical protein TEA_006861 [Camellia sinensis var. sinensis]	[more]
KAF4359848.1	1.2e-47	90.32	hypothetical protein G4B88_020369 [Cannabis sativa]	[more]
KAF4348598.1	1.2e-47	90.32	hypothetical protein G4B88_024076 [Cannabis sativa] >KAF4349419.1 hypothetical p...	[more]

BLAST of HG10015816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTY4	9.9e-42	75.56	Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana ...	[more]
Q941D5	4.8e-36	61.87	Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana ...	[more]
Q9SKI2	1.3e-14	37.59	Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana ...	[more]
Q54DB1	1.1e-11	34.92	Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=...	[more]
O43633	6.5e-09	34.13	Charged multivesicular body protein 2a OS=Homo sapiens OX=9606 GN=CHMP2A PE=1 SV...	[more]

BLAST of HG10015816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9M7	7.9e-50	81.05	Vacuolar protein sorting-associated protein 2-like protein 2 OS=Cucumis melo var...	[more]
A0A445DVF5	6.7e-49	91.94	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g013486 PE=4 SV=1	[more]
A0A4S4ELH2	3.3e-48	91.80	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0068...	[more]
A0A7J6DR81	5.6e-48	90.32	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_021002 PE=4 SV=1	[more]
A0A7J6EN65	5.6e-48	90.32	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_020369 PE=4 SV=1	[more]

BLAST of HG10015816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44560.1	7.0e-43	75.56	SNF7 family protein	[more]
AT5G44560.2	7.0e-43	75.56	SNF7 family protein	[more]
AT1G03950.1	3.4e-37	61.87	vacuolar protein sorting-associated protein 2.3	[more]
AT2G06530.1	9.6e-16	37.59	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	GENE3D	6.10.140.1230		coord: 114..156 e-value: 3.5E-7 score: 32.2 coord: 51..113 e-value: 5.8E-16 score: 60.8
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 114..176
None	No IPR available	PANTHER	PTHR10476:SF45	BNAANNG10150D PROTEIN	coord: 51..113
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 51..113
None	No IPR available	PANTHER	PTHR10476:SF45	BNAANNG10150D PROTEIN	coord: 114..176
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 55..113 e-value: 1.1E-9 score: 38.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015816.1	HG10015816.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032509	endosome transport via multivesicular body sorting pathway
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0015031	protein transport
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0005771	multivesicular body