HG10015726 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015726
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein LATERAL ROOT PRIMORDIUM 1
Location	Chr02: 29354340 .. 29355870 (+)
RNA-Seq Expression	HG10015726
Synteny	HG10015726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCGACGCCTTCTTCTCTTCACCAACAGACCCAAATCATTTCTTCCGATCATCATCCATCTCTTCCTCTGCCGTCCTCCGCCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCGCCACAGGCCCCGCCCAATCAGACGGCTGACGATGGTAGCGAGCGTTGTCGGGGTTTGGAACATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGCGGTGGAGGAAATAATGGCTCCGACGAACAAGTGAAAGGCGACGGCGGGGATGGGTCTATGGCAGTGTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGATGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGGCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGAGGGTCTTCTGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCCGCCGTCGCCGCCGCTTCCACTTCTAATGCCACCACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTCTCTAACTCTCTCTTTCCATTCTTGTTTTCTTGTGTTTCTGAATGAATTCAGAATCATGAGCAGCAATAATGAGATATTTGTTTACTCTGTTTCTCTCTGTGTAATGATTTGGTTACTTGTTTCTTTTTGTATAATGTAAGATTAGTGGAAATACATTCTTATTCAGTTTCAAATTTGTAAGACTTTTATGAGTTGTTTTGATTTTATTTCTCTTTAAAGATCTTGCAGCAAATTTGCACATTTTCCTGAAGTTATTAACTAAACATGTTCATAAATACATATTCATTACGTATGTTGTTGGAAAACTTACAATCCTTTCATGTTTCTTTCTCTGTTTTCCTCTTCCTTCTCTCTCTCCTTTCTCCAACAAGGAGGGAGTTACTTGTATATACTAGTCGAATCTAGGATCAGTTGGAAATGACTTGTGAGTGTTTAAAAAAAATGTTTTTTTAAACCTTAAAAAGGGGTTTAAGTATTTAGAAAGTCATTCCGGCTTTATATATTCGGTTGAGTGGATTCATTTTTCTTGCTCAAATCTGTTCTTTAACTGTTTTGTTAACAAAAAGATCCTTTTCTAAAACCACCTCTTGGAATTCTCATGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCGTTGCCGGGGCATGTTCGGGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAAAATTGGGGGTCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACACCTCCATTTGGAAAGTGGTAACCACAACAGGGAATAG

mRNA sequence

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCGACGCCTTCTTCTCTTCACCAACAGACCCAAATCATTTCTTCCGATCATCATCCATCTCTTCCTCTGCCGTCCTCCGCCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCGCCACAGGCCCCGCCCAATCAGACGGCTGACGATGGTAGCGAGCGTTGTCGGGGTTTGGAACATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGCGGTGGAGGAAATAATGGCTCCGACGAACAAGTGAAAGGCGACGGCGGGGATGGGTCTATGGCAGTGTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGATGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGGCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGAGGGTCTTCTGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCCGCCGTCGCCGCCGCTTCCACTTCTAATGCCACCACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGATCCTTTTCTAAAACCACCTCTTGGAATTCTCATGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCGTTGCCGGGGCATGTTCGGGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAAAATTGGGGGTCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACACCTCCATTTGGAAAGTGGTAACCACAACAGGGAATAG

Coding sequence (CDS)

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCGACGCCTTCTTCTCTTCACCAACAGACCCAAATCATTTCTTCCGATCATCATCCATCTCTTCCTCTGCCGTCCTCCGCCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCGCCACAGGCCCCGCCCAATCAGACGGCTGACGATGGTAGCGAGCGTTGTCGGGGTTTGGAACATCTGAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGCGGTGGAGGAAATAATGGCTCCGACGAACAAGTGAAAGGCGACGGCGGGGATGGGTCTATGGCAGTGTGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGATGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCGGCTCGGCGCCGTGAGCGGCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGAGGGTCTTCTGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCCGCCGTCGCCGCCGCTTCCACTTCTAATGCCACCACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGATCCTTTTCTAAAACCACCTCTTGGAATTCTCATGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCGTTGCCGGGGCATGTTCGGGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAAAATTGGGGGTCATGTCTTCAAAGGCTTTCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACACCTCCATTTGGAAAGTGGTAACCACAACAGGGAATAG

Protein sequence

MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQAPPNQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDKNAFPSISHLHLESGNHNRE

Homology

[Close]

BLAST of HG10015726 vs. NCBI nr
Match: KAA0034761.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 572.4 bits (1474), Expect = 2.4e-159
Identity = 293/319 (91.85%), Postives = 300/319 (94.04%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  APP-NQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVC 120
            PP N T DD ++R R  ++LKRTQDFGFGKG+SLIGG GNNGSDE VKGD GDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 240
           GSSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQD FL PPLGILMTL
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 300
           KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATV IGGHVFKGFLYDQGADDK
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLESGNHNRE 318
           NAFPSISHLHL+SGNH+RE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of HG10015726 vs. NCBI nr
Match: XP_038892899.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 542.7 bits (1397), Expect = 2.1e-150
Identity = 281/318 (88.36%), Postives = 289/318 (90.88%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLL ATPCLPPPQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLTATPCLPPPQ 60

Query: 61  APPNQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVCR 120
             PNQTADD ++R R LE+LKRTQDFGFGKGDSL+GG GNN SDEQVKGD GDGSMAVCR
Sbjct: 61  PLPNQTADDVTDRSRSLENLKRTQDFGFGKGDSLMGGAGNNVSDEQVKGDAGDGSMAVCR 120

Query: 121 DCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180
           DCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG
Sbjct: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180

Query: 181 SSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTLK 240
           SSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQ               
Sbjct: 181 SSGSSSAGAKRPRVLIPSQSTAAAAAASTSNATTPRSFETTSSHQ--------------- 240

Query: 241 PDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDKN 300
            DASFKKSLPGHVRAPAVFRCHRVTAI+SGEGELAYQATV IGGHVFKGFLYDQGADDKN
Sbjct: 241 -DASFKKSLPGHVRAPAVFRCHRVTAINSGEGELAYQATVNIGGHVFKGFLYDQGADDKN 300

Query: 301 AFPSISHLHLESGNHNRE 318
           AFPSISHLHL+SGNH+R+
Sbjct: 301 AFPSISHLHLDSGNHHRD 302

[Close]

BLAST of HG10015726 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 534.3 bits (1375), Expect = 7.3e-148
Identity = 279/319 (87.46%), Postives = 286/319 (89.66%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  APP-NQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVC 120
            PP N T DD ++R R  ++LKRTQDFGFGKG+SLIGG GNNGSDE VKGD GDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 240
           GSSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 300
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATV IGGHVFKGFLYDQGADDK
Sbjct: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLESGNHNRE 318
           NAFPSISHLHL+SGNH+RE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of HG10015726 vs. NCBI nr
Match: XP_004142483.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_008495 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 3.6e-147
Identity = 278/319 (87.15%), Postives = 285/319 (89.34%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  APP-NQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVC 120
            PP N T DD ++R R  ++LKRTQDFGFGKG+SLI G GNNGSDE VKGD GDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 240
           GSSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 300
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATV IGGHVFKGFLYDQGADDK
Sbjct: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLESGNHNRE 318
           NAFPSISHLHL+SGNH+RE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of HG10015726 vs. NCBI nr
Match: KAG6601127.1 (Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 502.7 bits (1293), Expect = 2.4e-138
Identity = 263/317 (82.97%), Postives = 275/317 (86.75%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCL P  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP-- 60

Query: 61  APPNQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVCR 120
            PPNQ  D+ S+R R LE+LKRTQDFGFGKGDSLIGGGGN+G D+QVKGDGGDGS+ VCR
Sbjct: 61  -PPNQMPDEVSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCR 120

Query: 121 DCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180
           DCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    G
Sbjct: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS----G 180

Query: 181 SSGSSSAGAKRPRVLIPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTLKP 240
           SSGSSSAGAKRP+VLIPSQ+ A AAASTSNATTPRSFETTSSHQ                
Sbjct: 181 SSGSSSAGAKRPKVLIPSQTTAAAAASTSNATTPRSFETTSSHQ---------------- 240

Query: 241 DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDKNA 300
           DASFKKSLPG VRAPAVF+CHRVTAISSGEGEL YQATV IGGHVFKGFLYDQGAD KNA
Sbjct: 241 DASFKKSLPGQVRAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVKNA 294

Query: 301 FPSISHLHLESGNHNRE 318
            PSISHLHLESGNH R+
Sbjct: 301 LPSISHLHLESGNHLRD 294

[Close]

BLAST of HG10015726 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-54
Identity = 146/327 (44.65%), Postives = 184/327 (56.27%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++AALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------- 62

Query: 61  APPNQTADD-------GSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGD 120
             P Q  +D        + R +   +   TQ   F   +    G  +N S     G G  
Sbjct: 63  GTPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG---SGSGAS 122

Query: 121 GSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVA 180
           G+ A C+DCGN+AKKEC+ R CRTCCK RG  CSTHVKSTWV AARRRERQ++       
Sbjct: 123 GT-ATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PT 182

Query: 181 TASGDGGSSGSSSAGAKRPRVL---IPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKP 240
            A+   GSS S+S+G K+PR++      Q  A +  STSN T P+SFET+SS QD     
Sbjct: 183 GANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQD----- 242

Query: 241 PLGILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFL 300
                         +++ PG VRA AVF+C RVTA+  G+ E AYQA VKIGGHVFKGFL
Sbjct: 243 ----------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFL 292

Query: 301 YDQGADDKNAFPSISHLHL--ESGNHN 316
           YDQG + K  FPS+S LHL   + NHN
Sbjct: 303 YDQGLEPKEGFPSMSDLHLGGSANNHN 292

[Close]

BLAST of HG10015726 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 119 CRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 178
           CRDCGN+AKK+C +  CRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 179 GGSSGSSSAGAKRPRVLIPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 238
           GG SGS  AG     +    +   +   S+S+     S                G+ M  
Sbjct: 154 GGGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHS---------------AGLEM-- 213

Query: 239 KPDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVKIGGHVFKGFLYDQGAD 297
             +ASF    PG V + A+FRC +++ +   G+G+ AYQ TV IGGH+FKG LYDQG +
Sbjct: 214 -GEASF----PGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of HG10015726 vs. ExPASy Swiss-Prot
Match: Q9M2U4 (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 77/189 (40.74%), Postives = 99/189 (52.38%), Query Frame = 0


Query: 118 VCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 177
           VCRDCGNRAKKEC +  CRTCCK RG +C THVKSTW+P++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 178 DGGSSGSSSAGAKRPRVLIPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMT 237
                 SSS   ++ ++ I  QS+   +             TT+S Q             
Sbjct: 100 -----SSSSPSERKKKLKIDKQSSPNVSL----------LPTTTSRQ------------- 159

Query: 238 LKPDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVKIGGHVFKGFLYDQGAD 297
              +  F++ LPG + APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D
Sbjct: 160 ---ERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVD 181

Query: 298 DKNAFPSIS 306
              AFP +S
Sbjct: 220 HNKAFPCLS 181

[Close]

BLAST of HG10015726 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-26
Identity = 76/208 (36.54%), Postives = 98/208 (47.12%), Query Frame = 0


Query: 91  GDSLIGGGGNNGSDEQVK--GDGGDGSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCST 150
           G++   G G   +   ++  G GG      C+DCGN+AKK+C +  CRTCCK RG  CST
Sbjct: 114 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 173

Query: 151 HVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAVAAAST 210
           HV+STWVPAA+RRERQ                                  Q  A     T
Sbjct: 174 HVRSTWVPAAKRRERQ----------------------------------QQLATVQPQT 233

Query: 211 SNATTPRSFETTSSHQDPFLKPPLGILMTLKPDASFKK--SLPGHVRAPAVFRCHRVTAI 270
                PR       H++        ++ T  P  S  +  + P  V + AVFRC RV+++
Sbjct: 234 Q---LPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSV 284

Query: 271 SSGEGELAYQATVKIGGHVFKGFLYDQG 295
             GE E AYQ  V IGGH+FKG LYD G
Sbjct: 294 EDGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]

BLAST of HG10015726 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 85/220 (38.64%), Postives = 109/220 (49.55%), Query Frame = 0


Query: 85  DFGFGKGDSLIGGGGNNGSDEQVKG------DGGDGSMAVCRDCGNRAKKECEYRMCRTC 144
           D G G G S  G   + G  E  +        GG G    C+DCGN+AKK+C++  CRTC
Sbjct: 91  DVGLGVGPSRSGFDISAGDHEASRSGFVMMRSGGGG--ISCQDCGNQAKKDCQHMRCRTC 150

Query: 145 CKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS 204
           CK RG  C THVKSTWVPAA+RRERQ  +           G ++ +++   KR R   PS
Sbjct: 151 CKSRGFQCQTHVKSTWVPAAKRRERQQQL---AALQQQQQGHNNNNNNHKNKRQRE-DPS 210

Query: 205 QSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTLKPDASFKKSLPGHVRAPAVF 264
            S+ V+    SN        T       F                     P  VR  AVF
Sbjct: 211 ASSLVSTRLPSN--------TNGLEVGKF---------------------PSKVRTSAVF 270

Query: 265 RCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 299
           +C ++++I   E +LAYQA V IGGHVFKG LYDQG + +
Sbjct: 271 QCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQ 275

[Close]

BLAST of HG10015726 vs. ExPASy TrEMBL
Match: A0A5D3CCT8 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003120 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 293/319 (91.85%), Postives = 300/319 (94.04%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  APP-NQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVC 120
            PP N T DD ++R R  ++LKRTQDFGFGKG+SLIGG GNNGSDE VKGD GDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 240
           GSSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQD FL PPLGILMTL
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 300
           KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATV IGGHVFKGFLYDQGADDK
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLESGNHNRE 318
           NAFPSISHLHL+SGNH+RE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of HG10015726 vs. ExPASy TrEMBL
Match: A0A1S3BFS5 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.5e-148
Identity = 279/319 (87.46%), Postives = 286/319 (89.66%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  APP-NQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVC 120
            PP N T DD ++R R  ++LKRTQDFGFGKG+SLIGG GNNGSDE VKGD GDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 240
           GSSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 300
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATV IGGHVFKGFLYDQGADDK
Sbjct: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLESGNHNRE 318
           NAFPSISHLHL+SGNH+RE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of HG10015726 vs. ExPASy TrEMBL
Match: A0A0A0KWX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.8e-147
Identity = 278/319 (87.15%), Postives = 285/319 (89.34%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  APP-NQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVC 120
            PP N T DD ++R R  ++LKRTQDFGFGKG+SLI G GNNGSDE VKGD GDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQS-AAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 240
           GSSGSSSAGAKRPRVLIPSQS AA AAASTSNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDK 300
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATV IGGHVFKGFLYDQGADDK
Sbjct: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLESGNHNRE 318
           NAFPSISHLHL+SGNH+RE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of HG10015726 vs. ExPASy TrEMBL
Match: A0A6J1JNR9 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486128 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.3e-137
Identity = 263/317 (82.97%), Postives = 275/317 (86.75%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCL P  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP-- 60

Query: 61  APPNQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVCR 120
            PPNQ  D+ S+RCR LE+LKRTQDFGFGKGDSLIGGGGN+G D+QVKGDGGDGS+ VCR
Sbjct: 61  -PPNQMPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCR 120

Query: 121 DCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180
           DCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    G
Sbjct: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS----G 180

Query: 181 SSGSSSAGAKRPRVLIPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTLKP 240
           SSGSSSAGAKRP+VLIPSQ+A  AAASTSNATTPRSFETTSSHQ                
Sbjct: 181 SSGSSSAGAKRPKVLIPSQTA--AAASTSNATTPRSFETTSSHQ---------------- 240

Query: 241 DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDKNA 300
           DASFKKSLPG VRAPAVF+CHRVTAISSG GEL YQATV IGGHVFKGFLYDQGAD KNA
Sbjct: 241 DASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNA 292

Query: 301 FPSISHLHLESGNHNRE 318
            PSISHLHLESGNH R+
Sbjct: 301 LPSISHLHLESGNHLRD 292

[Close]

BLAST of HG10015726 vs. ExPASy TrEMBL
Match: A0A6J1GXY1 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458506 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.7e-137
Identity = 263/318 (82.70%), Postives = 276/318 (86.79%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCL P  
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP-- 60

Query: 61  APPNQTADDGSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGDGSMAVCR 120
            PPNQ  D+ S+R R LE+LKRTQDFGFGKGDSLIGGGGN+G D+QVKGDGGDGS+ VCR
Sbjct: 61  -PPNQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCR 120

Query: 121 DCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGG 180
           DCGNRAKKECEYR CRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    G
Sbjct: 121 DCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS----G 180

Query: 181 SSGSSSAGAKRPRVLIPSQ-SAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTLK 240
           SSGSSSAGAKRP+VLIPSQ +AA AAASTSNATTPRSFETTSSHQ               
Sbjct: 181 SSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQ--------------- 240

Query: 241 PDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFLYDQGADDKN 300
            DASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATV IGGHVFKGFLYDQGAD KN
Sbjct: 241 -DASFKKSLPGQVQAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVKN 295

Query: 301 AFPSISHLHLESGNHNRE 318
           A PSISHLHLESGNH R+
Sbjct: 301 ALPSISHLHLESGNHLRD 295

[Close]

BLAST of HG10015726 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-55
Identity = 146/327 (44.65%), Postives = 184/327 (56.27%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++AALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------- 62

Query: 61  APPNQTADD-------GSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGD 120
             P Q  +D        + R +   +   TQ   F   +    G  +N S     G G  
Sbjct: 63  GTPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG---SGSGAS 122

Query: 121 GSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVA 180
           G+ A C+DCGN+AKKEC+ R CRTCCK RG  CSTHVKSTWV AARRRERQ++       
Sbjct: 123 GT-ATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PT 182

Query: 181 TASGDGGSSGSSSAGAKRPRVL---IPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKP 240
            A+   GSS S+S+G K+PR++      Q  A +  STSN T P+SFET+SS QD     
Sbjct: 183 GANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQD----- 242

Query: 241 PLGILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFL 300
                         +++ PG VRA AVF+C RVTA+  G+ E AYQA VKIGGHVFKGFL
Sbjct: 243 ----------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFL 292

Query: 301 YDQGADDKNAFPSISHLHL--ESGNHN 316
           YDQG + K  FPS+S LHL   + NHN
Sbjct: 303 YDQGLEPKEGFPSMSDLHLGGSANNHN 292

[Close]

BLAST of HG10015726 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-55
Identity = 146/327 (44.65%), Postives = 184/327 (56.27%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++AALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------- 62

Query: 61  APPNQTADD-------GSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGD 120
             P Q  +D        + R +   +   TQ   F   +    G  +N S     G G  
Sbjct: 63  GTPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG---SGSGAS 122

Query: 121 GSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVA 180
           G+ A C+DCGN+AKKEC+ R CRTCCK RG  CSTHVKSTWV AARRRERQ++       
Sbjct: 123 GT-ATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PT 182

Query: 181 TASGDGGSSGSSSAGAKRPRVL---IPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKP 240
            A+   GSS S+S+G K+PR++      Q  A +  STSN T P+SFET+SS QD     
Sbjct: 183 GANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQD----- 242

Query: 241 PLGILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFL 300
                         +++ PG VRA AVF+C RVTA+  G+ E AYQA VKIGGHVFKGFL
Sbjct: 243 ----------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFL 292

Query: 301 YDQGADDKNAFPSISHLHL--ESGNHN 316
           YDQG + K  FPS+S LHL   + NHN
Sbjct: 303 YDQGLEPKEGFPSMSDLHLGGSANNHN 292

[Close]

BLAST of HG10015726 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-55
Identity = 146/327 (44.65%), Postives = 184/327 (56.27%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++AALG  VG+ PLL A        
Sbjct: 90  MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------- 149

Query: 61  APPNQTADD-------GSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGD 120
             P Q  +D        + R +   +   TQ   F   +    G  +N S     G G  
Sbjct: 150 GTPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG---SGSGAS 209

Query: 121 GSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVA 180
           G+ A C+DCGN+AKKEC+ R CRTCCK RG  CSTHVKSTWV AARRRERQ++       
Sbjct: 210 GT-ATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PT 269

Query: 181 TASGDGGSSGSSSAGAKRPRVL---IPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKP 240
            A+   GSS S+S+G K+PR++      Q  A +  STSN T P+SFET+SS QD     
Sbjct: 270 GANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQD----- 329

Query: 241 PLGILMTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVKIGGHVFKGFL 300
                         +++ PG VRA AVF+C RVTA+  G+ E AYQA VKIGGHVFKGFL
Sbjct: 330 ----------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFL 379

Query: 301 YDQGADDKNAFPSISHLHL--ESGNHN 316
           YDQG + K  FPS+S LHL   + NHN
Sbjct: 390 YDQGLEPKEGFPSMSDLHLGGSANNHN 379

[Close]

BLAST of HG10015726 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 132.1 bits (331), Expect = 7.8e-31
Identity = 78/179 (43.58%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 119 CRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 178
           CRDCGN+AKK+C +  CRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 179 GGSSGSSSAGAKRPRVLIPSQSAAVAAASTSNATTPRSFETTSSHQDPFLKPPLGILMTL 238
           GG SGS  AG     +    +   +   S+S+     S                G+ M  
Sbjct: 154 GGGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHS---------------AGLEM-- 213

Query: 239 KPDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVKIGGHVFKGFLYDQGAD 297
             +ASF    PG V + A+FRC +++ +   G+G+ AYQ TV IGGH+FKG LYDQG +
Sbjct: 214 -GEASF----PGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of HG10015726 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-30
Identity = 100/237 (42.19%), Postives = 129/237 (54.43%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLPPPQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++AALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------- 62

Query: 61  APPNQTADD-------GSERCRGLEHLKRTQDFGFGKGDSLIGGGGNNGSDEQVKGDGGD 120
             P Q  +D        + R +   +   TQ   F   +    G  +N S     G G  
Sbjct: 63  GTPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG---SGSGAS 122

Query: 121 GSMAVCRDCGNRAKKECEYRMCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVA 180
           G+ A C+DCGN+AKKEC+ R CRTCCK RG  CSTHVKSTWV AARRRERQ++       
Sbjct: 123 GT-ATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PT 182

Query: 181 TASGDGGSSGSSSAGAKRPRVL---IPSQSAAVAAASTSNATTPRSFETTSSHQDPF 228
            A+   GSS S+S+G K+PR++      Q  A +  STSN T P+SFET+SS Q  F
Sbjct: 183 GANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQGSF 217

The following BLAST results are available for this feature:

BLAST of HG10015726 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034761.1	2.4e-159	91.85	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein...	[more]
XP_038892899.1	2.1e-150	88.36	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_008446964.1	7.3e-148	87.46	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
XP_004142483.1	3.6e-147	87.15	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical pro...	[more]
KAG6601127.1	2.4e-138	82.97	Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10015726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	2.2e-54	44.65	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	1.1e-29	43.58	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9M2U4	1.2e-28	40.74	Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1	[more]
Q9SD40	5.7e-26	36.54	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	1.4e-24	38.64	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]

BLAST of HG10015726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCT8	1.2e-159	91.85	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BFS5	3.5e-148	87.46	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 S...	[more]
A0A0A0KWX6	1.8e-147	87.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1	[more]
A0A6J1JNR9	1.3e-137	82.97	protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1GXY1	3.7e-137	82.70	protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of HG10015726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.2	1.6e-55	44.65	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	1.6e-55	44.65	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.4	1.6e-55	44.65	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	7.8e-31	43.58	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.3	1.0e-30	42.19	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 117..296 e-value: 7.7E-57 score: 192.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..225
None	No IPR available	PANTHER	PTHR31604:SF28	PROTEIN SHI RELATED SEQUENCE 6	coord: 1..310
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 248..294 e-value: 4.1E-26 score: 88.7
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 118..160 e-value: 1.9E-23 score: 80.1
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015726.1	HG10015726.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding