HG10015685 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015685
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr02: 28923792 .. 28924073 (+)
RNA-Seq Expression	HG10015685
Synteny	HG10015685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTATGGCCTTCGACAAGGATCAGAGACTCTTTCAAGCATGCTTACATCAAAAAGCTGGAATGGAATCTCCAAAGAATGAAAATCCAAAAGCATCAAAAGCAATCTTCCAGCAAACAGAACTTGTTGGATAAAGAACAAGATTCTGATGTTGCTGATGGCGAAACTGCAGAATGTTCAACTTCAGTTTCTTTTGGCCAACGAGTACTTGAATTCTCCTCAGAAGTCCTCCTGCTTCTCTCTTGTTGTTACTGCTGCTATTGCTGCGGAGGTGATTAA

mRNA sequence

ATGCATCTATGGCCTTCGACAAGGATCAGAGACTCTTTCAAGCATGCTTACATCAAAAAGCTGGAATGGAATCTCCAAAGAATGAAAATCCAAAAGCATCAAAAGCAATCTTCCAGCAAACAGAACTTGTTGGATAAAGAACAAGATTCTGATGTTGCTGATGGCGAAACTGCAGAATGTTCAACTTCAGTTTCTTTTGGCCAACGAGTACTTGAATTCTCCTCAGAAGTCCTCCTGCTTCTCTCTTGTTGTTACTGCTGCTATTGCTGCGGAGGTGATTAA

Coding sequence (CDS)

ATGCATCTATGGCCTTCGACAAGGATCAGAGACTCTTTCAAGCATGCTTACATCAAAAAGCTGGAATGGAATCTCCAAAGAATGAAAATCCAAAAGCATCAAAAGCAATCTTCCAGCAAACAGAACTTGTTGGATAAAGAACAAGATTCTGATGTTGCTGATGGCGAAACTGCAGAATGTTCAACTTCAGTTTCTTTTGGCCAACGAGTACTTGAATTCTCCTCAGAAGTCCTCCTGCTTCTCTCTTGTTGTTACTGCTGCTATTGCTGCGGAGGTGATTAA

Protein sequence

MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAECSTSVSFGQRVLEFSSEVLLLLSCCYCCYCCGGD

Homology

[Close]

BLAST of HG10015685 vs. NCBI nr
Match: KAA0034724.1 (hypothetical protein E6C27_scaffold65G007460 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 7.6e-37
Identity = 81/93 (87.10%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQKHQ QSSSKQNLLDKE  SD ADGET++ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCGGD 94
          S SVSFGQRVLEF SE+L LLSCCYCCYCCGGD
Sbjct: 61 SPSVSFGQRVLEFFSELLHLLSCCYCCYCCGGD 93

[Close]

BLAST of HG10015685 vs. NCBI nr
Match: TYK09277.1 (hypothetical protein E5676_scaffold475G002720 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQKHQ QSSSKQNLLDKE  SD ADGET++ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCGGD 94
          S SVSFGQRVLEF SE+L LLSCCY CYCCGGD
Sbjct: 61 SPSVSFGQRVLEFFSELLHLLSCCYRCYCCGGD 93

[Close]

BLAST of HG10015685 vs. NCBI nr
Match: KAE8648857.1 (hypothetical protein Csa_008264 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 9.3e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQKHQ QSSSKQNLLDKE+ SD AD ET+E 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAETSEP 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
          S SVSFGQRVLEF SE+  LLSCCYCCYCCG
Sbjct: 61 SPSVSFGQRVLEFFSELFHLLSCCYCCYCCG 91

[Close]

BLAST of HG10015685 vs. NCBI nr
Match: KAG7012900.1 (hypothetical protein SDJN02_25653 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.1 bits (370), Expect = 7.4e-32
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKH-QKQSSSKQNLLDKEQDSDVADGETAE 60
          MHLWPSTRIRDSFK AYI+KLEWN+ RMKIQKH Q+QSSSKQNLLDK+Q SD ADGET+ 
Sbjct: 1  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSG 60

Query: 61 CSTSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
           S+SVSFG RVLEF SEVLLLLSCCYCCYCCG
Sbjct: 61 KSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG 91

[Close]

BLAST of HG10015685 vs. NCBI nr
Match: XP_022945676.1 (uncharacterized protein LOC111449839 [Cucurbita moschata])

HSP 1 Score: 147.1 bits (370), Expect = 7.4e-32
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKH-QKQSSSKQNLLDKEQDSDVADGETAE 60
          MHLWPSTRIRDSFK AYI+KLEWN+ RMKIQKH Q+QSSSKQNLLDK+Q SD ADGET+ 
Sbjct: 1  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSG 60

Query: 61 CSTSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
           S+SVSFG RVLEF SEVLLLLSCCYCCYCCG
Sbjct: 61 KSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG 91

[Close]

BLAST of HG10015685 vs. ExPASy TrEMBL
Match: A0A5A7SU31 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007460 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37
Identity = 81/93 (87.10%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQKHQ QSSSKQNLLDKE  SD ADGET++ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCGGD 94
          S SVSFGQRVLEF SE+L LLSCCYCCYCCGGD
Sbjct: 61 SPSVSFGQRVLEFFSELLHLLSCCYCCYCCGGD 93

[Close]

BLAST of HG10015685 vs. ExPASy TrEMBL
Match: A0A0A0KRM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623370 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQKHQ QSSSKQNLLDKE+ SD AD ET+E 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAETSEP 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCGGD 94
          S SVSFGQRVLEF SE+  LLSCCYCCYCCGGD
Sbjct: 61 SPSVSFGQRVLEFFSELFHLLSCCYCCYCCGGD 93

[Close]

BLAST of HG10015685 vs. ExPASy TrEMBL
Match: A0A5D3CBA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002720 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-36
Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQKHQ QSSSKQNLLDKE  SD ADGET++ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCGGD 94
          S SVSFGQRVLEF SE+L LLSCCY CYCCGGD
Sbjct: 61 SPSVSFGQRVLEFFSELLHLLSCCYRCYCCGGD 93

[Close]

BLAST of HG10015685 vs. ExPASy TrEMBL
Match: A0A6J1G1K0 (uncharacterized protein LOC111449839 OS=Cucurbita moschata OX=3662 GN=LOC111449839 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.6e-32
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKH-QKQSSSKQNLLDKEQDSDVADGETAE 60
          MHLWPSTRIRDSFK AYI+KLEWN+ RMKIQKH Q+QSSSKQNLLDK+Q SD ADGET+ 
Sbjct: 1  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSG 60

Query: 61 CSTSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
           S+SVSFG RVLEF SEVLLLLSCCYCCYCCG
Sbjct: 61 KSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG 91

[Close]

BLAST of HG10015685 vs. ExPASy TrEMBL
Match: A0A6J1CC78 (uncharacterized protein LOC111010237 OS=Momordica charantia OX=3673 GN=LOC111010237 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.7e-32
Identity = 78/92 (84.78%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQK-HQKQSSSKQNLLDKEQDSDVADGETAE 60
          MHLWPSTRIRDSFKHAYIKKLEWNL RMKIQK  Q+QSSSKQNLLDKEQ SD ADGETAE
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAE 60

Query: 61 CSTSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
           +  VSFG RVL+F SE LLLLSCCYCCYCCG
Sbjct: 61 NTNLVSFGGRVLDFCSEALLLLSCCYCCYCCG 91

[Close]

BLAST of HG10015685 vs. TAIR 10
Match: AT5G49015.1 (Expressed protein )

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-08
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPS ++R+SFK    K+     QRM   K  +  S++Q LLD +++S          
Sbjct: 1  MHLWPSLKLRNSFKSTSQKR----YQRMNSGK--QSQSNQQKLLDGDKESG--------- 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
          S  +S G        +V ++LSCCYCC+CCG
Sbjct: 61 SPEISSGGGFAVVCRDVAMVLSCCYCCFCCG 76

[Close]

BLAST of HG10015685 vs. TAIR 10
Match: AT5G49015.2 (Expressed protein )

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-08
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLQRMKIQKHQKQSSSKQNLLDKEQDSDVADGETAEC 60
          MHLWPS ++R+SFK    K+     QRM   K  +  S++Q LLD +++S          
Sbjct: 1  MHLWPSLKLRNSFKSTSQKR----YQRMNSGK--QSQSNQQKLLDGDKESG--------- 60

Query: 61 STSVSFGQRVLEFSSEVLLLLSCCYCCYCCG 92
          S  +S G        +V ++LSCCYCC+CCG
Sbjct: 61 SPEISSGGGFAVVCRDVAMVLSCCYCCFCCG 76

The following BLAST results are available for this feature:

BLAST of HG10015685 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034724.1	7.6e-37	87.10	hypothetical protein E6C27_scaffold65G007460 [Cucumis melo var. makuwa]	[more]
TYK09277.1	1.9e-35	86.02	hypothetical protein E5676_scaffold475G002720 [Cucumis melo var. makuwa]	[more]
KAE8648857.1	9.3e-35	85.71	hypothetical protein Csa_008264 [Cucumis sativus]	[more]
KAG7012900.1	7.4e-32	83.70	hypothetical protein SDJN02_25653 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945676.1	7.4e-32	83.70	uncharacterized protein LOC111449839 [Cucurbita moschata]	[more]

BLAST of HG10015685 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10015685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SU31	3.7e-37	87.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KRM0	1.1e-36	86.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623370 PE=4 SV=1	[more]
A0A5D3CBA7	9.1e-36	86.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1G1K0	3.6e-32	83.70	uncharacterized protein LOC111449839 OS=Cucurbita moschata OX=3662 GN=LOC1114498...	[more]
A0A6J1CC78	4.7e-32	84.78	uncharacterized protein LOC111010237 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of HG10015685 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49015.1	4.7e-08	38.46	Expressed protein	[more]
AT5G49015.2	4.7e-08	38.46	Expressed protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37263	EXPRESSED PROTEIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015685.1	HG10015685.1	mRNA