HG10015670 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015670
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	thioredoxin-like 3-2, chloroplastic
Location	Chr02: 28788468 .. 28790075 (+)
RNA-Seq Expression	HG10015670
Synteny	HG10015670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAAAGCTTTGCCCCTTCACCTCGGAATCGTGAAATCTTTTCCCAAATTCGACGGTTCTTTTGATCTTCCTCCACCTCCCCAACTTCCGTCCGCGAGGCTCGCCGTCTCTGGTTTCAACAGGCTTCCTTTGTCCCGGAAATTTCCGCCGTCTTTCCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTGCTCGGAGCTTGGACCCAAGACAGTACCCTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAACTCAAGTCCATTTGCAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGAAACGCAACGAGCTCGTGATTCTTGTATGGTATGTATACATTTCTTGTGGGCTTTTTCTGGGAAATGTTGAGTTAATTACGGAAGTTTCTTACAAAGCGTTTTTCGGCTAATAAGTTTTAGATAGAAATCTAGACGATGTGAATGTATTTGAGTTTAACTGGATCTTGTTTGATTAGGAATTTATTTGTTTATTAGGAAAAATTGTTCCCAACTGCTAGATTTTCCCTGGGCTTTCACTGAAATTAACTAACCTTCGTAGTACATTGATTGTGATCATTTGGAAGTGAATGGTGTGATATTTTTCTCCAGTTTTCCTTACAAGCCTTTCAAGTACATTTCTCATAATTTTATCTTCTTTAGTTGAAAAGTGAATTTATGTGGATCTGTAGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAACCCCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGGTTAGCTTCTAGCCCATTTCTTCTGACCAACCAGATGGCTAAGATTGAACTATTTTATCATTCTCAATGTGCTGGATAATACTTAAAAGACCAGTGTGCCGGTCCTTATTGAAGTTGTGTATGTGCTTGATGAATTGTAGATTGCAATTCTACTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGTGCTGGATTAGCTGTAAGTTCCTTTCAAAGCATTGTGATATTTTTCCCATTTTGTTTGTGTTGCCATAAACCTTTATAATGATCTTTTTTAGGTAGGACTCGAGGTTATGATAAATTCTTCTTCTCTGAGGGAGTGATTTTCTTTGGATATTGTACTTGTGGTTCTCGTTACAATGGAAATTAGGACTTGTGTTTCATTACCATCAGGAACATTTCCGATTTGCAGTTTAGACAGAGACAGTAGACATCTTGAGTTTGTGTTACTTTGATGGATTAGTTGATTGAATAAACTACATTATCTGTTTAATCTTTCATTCTAATATGTCCAAACATAAAATCTTTCCATTCCTTGGTTGATACAAATTCTGATAGTTTTGATTTTGTACGTTTTCTCATGTATCTCAACCGTTCGTCTTTGAATCATCCAGAAGATGCCAGCTATACAGGTGAGTTTCCTGACAATCAAATGTCTTACAGCAGGAAACCTTCCTCTCTACTAATATCAAGATCTTCATTATGTTTGTTGCAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTCGTCAACGATGTTCAGAAAATGATTGAACGTGAGCTAACAGGCGAGTGA

mRNA sequence

ATGGTCAAAGCTTTGCCCCTTCACCTCGGAATCGTGAAATCTTTTCCCAAATTCGACGGTTCTTTTGATCTTCCTCCACCTCCCCAACTTCCGTCCGCGAGGCTCGCCGTCTCTGGTTTCAACAGGCTTCCTTTGTCCCGGAAATTTCCGCCGTCTTTCCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTGCTCGGAGCTTGGACCCAAGACAGTACCCTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAACTCAAGTCCATTTGCAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGAAACGCAACGAGCTCGTGATTCTTGTATGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAACCCCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGTGCTGGATTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTCGTCAACGATGTTCAGAAAATGATTGAACGTGAGCTAACAGGCGAGTGA

Coding sequence (CDS)

ATGGTCAAAGCTTTGCCCCTTCACCTCGGAATCGTGAAATCTTTTCCCAAATTCGACGGTTCTTTTGATCTTCCTCCACCTCCCCAACTTCCGTCCGCGAGGCTCGCCGTCTCTGGTTTCAACAGGCTTCCTTTGTCCCGGAAATTTCCGCCGTCTTTCCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTGCTCGGAGCTTGGACCCAAGACAGTACCCTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAACTCAAGTCCATTTGCAGTGAACTTGAGTTCGATAAGGCTATTGCAGATGCGGAGAAACGCAACGAGCTCGTGATTCTTGTATGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAACCCCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGTGCTGGATTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGATTGGTCTCTACAAAGCATATTTAGTCGTCAACGATGTTCAGAAAATGATTGAACGTGAGCTAACAGGCGAGTGA

Protein sequence

MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATGEKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIERELTGE

Homology

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BLAST of HG10015670 vs. NCBI nr
Match: XP_038891538.1 (thioredoxin-like 3-2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 397.5 bits (1020), Expect = 6.8e-107
Identity = 197/203 (97.04%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLA SGFNRLPL RKFPP  QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAGSGFNRLPLCRKFPPLSQKVSATG 60

Query: 61  EK-TSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120
           EK TSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC
Sbjct: 61  EKTTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120

Query: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180
           RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI
Sbjct: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180

Query: 181 GLYKAYLVVNDVQKMIERELTGE 203
           GLYKAYLV+NDVQKMIERELTGE
Sbjct: 181 GLYKAYLVINDVQKMIERELTGE 203

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BLAST of HG10015670 vs. NCBI nr
Match: XP_038891539.1 (thioredoxin-like 3-2, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 6.4e-105
Identity = 196/203 (96.55%), Postives = 197/203 (97.04%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLA SGFNRLPL RKFPP  QKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAGSGFNRLPLCRKFPPLSQKVSATG 60

Query: 61  EK-TSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120
           EK TSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC
Sbjct: 61  EKTTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWC 120

Query: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVI 180
           RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA MPAIQLWKDGKKQDEVI
Sbjct: 121 RNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA-MPAIQLWKDGKKQDEVI 180

Query: 181 GLYKAYLVVNDVQKMIERELTGE 203
           GLYKAYLV+NDVQKMIERELTGE
Sbjct: 181 GLYKAYLVINDVQKMIERELTGE 202

[Close]

BLAST of HG10015670 vs. NCBI nr
Match: XP_008446852.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X8 [Cucumis melo] >TYK09259.1 thioredoxin-like 3-2 [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 6.0e-103
Identity = 190/202 (94.06%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFD SFDLPP PQL SARL  SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSLLGAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVQKMIERELTGE 203
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of HG10015670 vs. NCBI nr
Match: XP_008446851.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 3.3e-101
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFD SFDLPP PQL SARL  SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSLLGAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180

Query: 181 EVIGLYKAYLVVNDVQKMIERELTGE 203
           EV+GLYKAYLVVNDV+KMIERELT E
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 206

[Close]

BLAST of HG10015670 vs. NCBI nr
Match: XP_004142496.2 (thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus] >KGN52252.1 hypothetical protein Csa_008733 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 5.6e-101
Identity = 187/202 (92.57%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLH GIVKSFPKF  SFDLPP PQL SARLA SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSL GAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVQKMIERELTGE 203
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

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BLAST of HG10015670 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.8e-44
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 28  PQLPSARLAVSGFNRLPLSRKFPPSFQKVSATGEKTSLLGAWTQDSTLQFRDESPVSIEL 87
           P +P  R   S F+R P + K+     K+    E+   +    QD  LQ  D+SPVS+EL
Sbjct: 20  PLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVEL 79

Query: 88  KSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDV 147
             IC E  FD+ + DA+K  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +DV
Sbjct: 80  GPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDV 139

Query: 148 NMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIERE 199
           N VP++LV RAG+ KMP IQLW+DG+KQ EVIG +KA+ VVN+V++MIE +
Sbjct: 140 NAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]

BLAST of HG10015670 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-26
Identity = 52/116 (44.83%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 82  PVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I +  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIER 198
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EVIG +K +LV+ +V+++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

[Close]

BLAST of HG10015670 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 51/113 (45.13%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 85  IELKSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYC 144
           +E++ I S  + D A+  + +  + +I+ WMA+WCR  IYLKP+LE++A + +P ++FY 
Sbjct: 80  VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGE-FPGVRFYF 139

Query: 145 IDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIER 198
           +DVN VP  +V R  + KMP IQLWKDG+   EVIG +KA+LV+++V++MI++
Sbjct: 140 VDVNKVPQTVVKRGNITKMPTIQLWKDGEWAAEVIGGHKAWLVMDEVREMIQK 191

[Close]

BLAST of HG10015670 vs. ExPASy Swiss-Prot
Match: P37395 (Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.4e-06
Identity = 28/104 (26.92%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 92  SELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVP 151
           ++  F+K + ++EK   LV++ + A WC     + P ++ LA +Y  +++   I+ +  P
Sbjct: 8   TDFSFEKEVVNSEK---LVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENP 67

Query: 152 HKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMI 196
             +    G+  +P + L+KDGK+ D VIG      + N ++K +
Sbjct: 68  -SISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107

[Close]

BLAST of HG10015670 vs. ExPASy Swiss-Prot
Match: P80028 (Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 5.4e-06
Identity = 26/91 (28.57%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 90  ICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNM 149
           I S+  +D  +A  ++ ++ +++ + A WC     + P  E L+ DY  ++ F  +DV+ 
Sbjct: 8   IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 67

Query: 150 VPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 181
           V   +   AG+  MP   ++KDG K D+++G
Sbjct: 68  VA-AVAEAAGITAMPTFHVYKDGVKADDLVG 97

[Close]

BLAST of HG10015670 vs. ExPASy TrEMBL
Match: A0A5D3CG32 (Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002530 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.9e-103
Identity = 190/202 (94.06%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFD SFDLPP PQL SARL  SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSLLGAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVQKMIERELTGE 203
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of HG10015670 vs. ExPASy TrEMBL
Match: A0A1S3BGQ4 (thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.9e-103
Identity = 190/202 (94.06%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFD SFDLPP PQL SARL  SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSLLGAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVQKMIERELTGE 203
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of HG10015670 vs. ExPASy TrEMBL
Match: A0A1S3BG27 (thioredoxin-like 3-2, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.6e-101
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFD SFDLPP PQL SARL  SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSLLGAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180

Query: 181 EVIGLYKAYLVVNDVQKMIERELTGE 203
           EV+GLYKAYLVVNDV+KMIERELT E
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 206

[Close]

BLAST of HG10015670 vs. ExPASy TrEMBL
Match: A0A0A0KUX7 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622670 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 187/202 (92.57%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLH GIVKSFPKF  SFDLPP PQL SARLA SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSL GAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLAKMPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVQKMIERELTGE 203
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of HG10015670 vs. ExPASy TrEMBL
Match: A0A1S3BGW0 (thioredoxin-like 3-2, chloroplastic isoform X9 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 189/202 (93.56%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDGSFDLPPPPQLPSARLAVSGFNRLPLSRKFPPSFQKVSATG 60
           MVKALPLHLGIVKSFPKFD SFDLPP PQL SARL  SGFNRLPLSRKFPP FQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSTLQFRDESPVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCR 120
           EKTSLLGAWTQDS LQFRDESPVSIELKSI SELEFDKAIADAE+RNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA MPAIQLWKDGKKQDEV+G
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA-MPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVQKMIERELTGE 203
           LYKAYLVVNDV+KMIERELT E
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 201

[Close]

BLAST of HG10015670 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-45
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 28  PQLPSARLAVSGFNRLPLSRKFPPSFQKVSATGEKTSLLGAWTQDSTLQFRDESPVSIEL 87
           P +P  R   S F+R P + K+     K+    E+   +    QD  LQ  D+SPVS+EL
Sbjct: 20  PLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVEL 79

Query: 88  KSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDV 147
             IC E  FD+ + DA+K  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +DV
Sbjct: 80  GPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDV 139

Query: 148 NMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIERE 199
           N VP++LV RAG+ KMP IQLW+DG+KQ EVIG +KA+ VVN+V++MIE +
Sbjct: 140 NAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]

BLAST of HG10015670 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27
Identity = 52/116 (44.83%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 82  PVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I +  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVIGLYKAYLVVNDVQKMIER 198
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EVIG +K +LV+ +V+++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

[Close]

BLAST of HG10015670 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 82  PVSIELKSICSELEFDKAIADAEKRNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I +  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNMVPHKLVVRAGLA 162
           FY +DVN VP  LV R  ++
Sbjct: 153 FYYVDVNKVPQTLVKRGNIS 172

The following BLAST results are available for this feature:

BLAST of HG10015670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891538.1	6.8e-107	97.04	thioredoxin-like 3-2, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038891539.1	6.4e-105	96.55	thioredoxin-like 3-2, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_008446852.1	6.0e-103	94.06	PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X8 [Cucumis melo] >TYK092...	[more]
XP_008446851.1	3.3e-101	92.23	PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo]	[more]
XP_004142496.2	5.6e-101	92.57	thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus] >KGN52252.1 hyp...	[more]

BLAST of HG10015670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT6	3.8e-44	51.46	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q9FG36	3.6e-26	44.83	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	1.3e-23	45.13	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P37395	5.4e-06	26.92	Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1	[more]
P80028	5.4e-06	28.57	Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3	[more]

BLAST of HG10015670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG32	2.9e-103	94.06	Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475...	[more]
A0A1S3BGQ4	2.9e-103	94.06	thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3BG27	1.6e-101	92.23	thioredoxin-like 3-2, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KUX7	2.7e-101	92.57	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622670...	[more]
A0A1S3BGW0	2.7e-101	93.56	thioredoxin-like 3-2, chloroplastic isoform X9 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of HG10015670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04260.1	2.7e-45	51.46	WCRKC thioredoxin 2	[more]
AT5G06690.1	2.6e-27	44.83	WCRKC thioredoxin 1	[more]
AT5G06690.2	1.7e-15	43.75	WCRKC thioredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 93..184 e-value: 1.3E-9 score: 37.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 64..200 score: 8.702806
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 84..196 e-value: 3.1E-13 score: 51.4
None	No IPR available	PANTHER	PTHR47192:SF4	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 35..199
None	No IPR available	CDD	cd02947	TRX_family	coord: 95..196 e-value: 9.56601E-12 score: 57.1829
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 35..199
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 88..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015670.1	HG10015670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma