Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTGCGAAGGGACAGAAAAGCCCAGAAGAAGAAGGGTTGGGAACGGTTGGGAAGTTTATAGATGAAAGATTCCTTAGGAAATCGCCGGCGAAACCTTATGATCGGCCGCCGACTGCCTTAAGAACGTCTAGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCGGCTCAAAGGCTCATTTCCTCTAGTTCTCAGATGTTTTTTTCCTCTCTGATCCGAAATTTCCCTCACCATTTAACGTCTCGTGTTTCGTCCCAAGGTTTCTGTTTCAACTTCTTAATGATTTTTCTTATGGCTCTGTAGTGGATCATTCGCAGATGCTATTGCTGGAGTTGGTTTTTGTGATTTGCGACTGTTTGTGATTATTTTGATATCTTGCAACTTCTTCTTCATCCGTCAAAGAAGTCTTAGCTAGTTTAAATGTTACCTAGCACGTACTACATTTAAGACGGTTTCTCTTTCAGGAACTTTATTAGTTAAGTAGCATCTGATTTTTTTTTAATTTTCCAAGAGTAATATGCTCGTTTATTTTTTCTTTTCATGCATCAGAATCAAGCCAGTCAAGAAAGGATGACAAGAAGGCCGATGTAACTGTAAGTTTTATTTTGGTATATGGCGGGTGCTTACGCGTAGAAGATATGAATGTTCTTTATACTTGATGGTCATTTATTATTATATGCTTATTTAAAAGAAATTGGCTATCTATATCGTTCTTTTCCATGTTCTGAATGCCTTGCCTTGATTAATCTAATTGGAGAACTTTTATGGTCTGTATATAACAAATTTACTTGCAAAGGACCCTTTTGAGGTCCAAGTAGCAACCAATGTAGGTGATAATCGGAGTAGATCGTCTGATCAATTTTTAACGATGGAGCTTGAAAAAACTTTGAAGCAAAAGACCTTCACCAGGTAACTTTTGCAGTATATATTACTTTATCGTTCGTGAGTACTATTTCAGGCATTTCATATTTTATTTTCTTATTGTTATTGTTTTCCCCCCTTCTATGCAGTATGGTTTCAGTAACTTTTGGTGCTTCCATCTTTTGGTTTGCATTGTTTCTGTTTCCTACATTTTCCTTTGTAGTGAAATGTAATATATTTTTCAAAGTTAACCATTTATTATATACTTGTTTTTTTAGCTCTTGGGATTATTGTTGACTCCTTAAAATGGGAATCACTCTGCAGGTCTGAGATTGATCATTTGACAACCCTATTGCAGTCAAGAAATGTTGATTTACCTGTTGTGAATGAGGAGAAAAGGTGTATCTCTTCTATTCCAGAATCTAACAGGAAGGAGTTTGTAAAAATACCAAATTCAGAAGTTAGGATGGGCAGGCCATCAATTTCAACTCCCATCTTGAGTTCAAGTGTTCGGTTCTTTCTTTTCTTTCCCCATTTTTTAATGCCTTACGATTTCCGTGTGTGAGAGTTCTCAAATAAGTTATTTTCCATATGTTTTTTTAATACTGTGATCACATTTAGTGGTTAAAATGTCTTCAGGTCCTTGATGAAGATATTTCAAAACCTGCAGAGATAGCAAGGGAATATATGGGCAGTAGACAGCCAAAAGTTTGTCCTTCAAGACGATCTTTGCAAGCTCAAGGACTTGGGGAAAATTCAGCTGATCCAACTAGGATATCATTGTCTTCAAAATCAATCAGTATGTTGCTTGCGCCATCATCTACTAGTCAGGTACTTGTGGGAATGGTTCTATAACTTTCAACTCTCAAAGCCGATCTGCAATGTACAGCATGACTCAGTTGCCCTATTCCAGAATTCATACAACATTCATTAGCAAGGTTTTACCCTAGTGTGTTTTCTTGGCCAGGCTTTTTAGTTGGGATCACTGTTAACGGATATTGTAATTCAGAAATACAGGAAGATTTTATAATCTAATTGTCCTGCATGTCTCAGATGCTCTGTTTCATGGAGTTGCATGTTAAATCATTTATTTTATTTTTTTCTACCACATGCAGGGTTTGAAACGTAGGAGCTCATTTTTTGATGAACACATTGGACCTGTTGTTCCTTTGCGCAGAACTCAACAAAAACCTAACATTCATCTATCAAAGGGATTAAGCTTACCTGTTTCTGCTGGACCTATTTTTGTCCCTGAAGATGGTCTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGGGAGAACTCAGAATTTTCCATCTTCTATTTGGAACTCACAACTGTCTCTTAAACACAAGAAAACTTTTGCAAGAAAGTTCATTAAGAACATGGAGAGTGATAACATTCCTGGTGCAGGTAGTAGCTCTATTTATACTCCTTCAAGGTCTTCTAAGATGGCTTCTAAAATATTGGAGCAGCTCGATAAGTTGACCTCTCCAAAGGAGAAAGTATCTACATTTAGTCGACTTCCTGTTGGGGAAAAATATCACCCTAAGCTATCACCCCTCACAGTAGGTGGGCATCTCAAAAGTGTGAAGGATGTGGACTTACCCAGAAATGAAGAATTTGTTCATGACGATAAGCAGTCAAATAGTTTGTATGGGATCTCATATCAACACAACCGAGAAAACACTTTCCAAAATAAAGAGAAGCTGGAAAAACTGAAACCATTGGATCCTCATCCTAGATGTGCTCTACTGAAGGACTCTGGGTCAATAGGTTCTAGTAAGGATTCCATTAATGATCTAGGAGTGCCTGCATCTGCTGTGGTGAAATCTACTATTCAGCTCCCAAAAGACAAACGGGCATTTCCGATGTCGCCTGACAAGGTTTGTAACCTTTGAACTTTCCATGTAATGGTAAAACATTGCAGCAATAGCGCTATATAATATCTTGATGTTCTTTTTCTTATTTTCCACATCATCACACATAATTTTGCATCTCAATCATTTTTCTGAAGCCTAAATTGTAGAAATACCATTGAACTTTGTAATTTATTTCAGAAAAAAATTTCAAAAAAAACTTCAGAAATACCCTTACTGTTAGTTTTGGATGGAAATAGTTAGTACTTTGTTTAAAAAAATACCTATGAACTTTCAAAAATTTCAATAACACCTTTAAACATTCAAAAAAAGTCAAAAAATACTCTTATTGTTAGTATATAAGCAAAAACCGTTAGTACCTATTTAAAAAATATCCCTAAAACTTTCAAAAGTTGCATAGTATCCTTAACCTATCAGACTCAGAGGCATTGGTTTGTTTTTTTGTTTTCTGCCATTGACTAAAGTACTATTTTGTAGTTTTTTTTTTTCCTCTTTTCTTGACAGGCTGTTAGATTTTGTTAAGATAATGTTTAAGTTATTTCATTTACCTGCGTTCAAGTAAAACTTCAGACACCTAATTAGAATCCATACGTGGTTTTCATTTTTTTTTTTTTCTACTTATCATTTACTTCTTTACTACTATAATATTTGGTAGTAATGTGCGAACATTTAATAAGATTGTTACATGGGCAGCAATTAAATAACTATTTGGATGATCATGAAGGATTCTAAGTAATGTGCCTCTGATCAAATATTATATTTCCTCTGGTTTCTTTCTTTTGAATATATGTTACAATCTTTTGAATCTTTAACCAGTCTCACTGCCTTTCTCAATGATAGGATAGTGTTGACCAAGATGAAAGTTCTGCTGATAGAGTTGCACCTTCTTCCGCTGAGGTTAGAGAAGGTGACATTTCTTTGGCCGTGAGACAAACAACTGCCAATGAAGCCCTTGCTCCAGCAAAGCCGCAAACTACATCTGAACTGATAGTGGGTTCTCTCAACAGAAGTTCTGATTTGAAAACTTCTGAAGACAGCATTGATGATGATATCGATGCCAGACTTACTTTTCAAAATGCATCCTCACTTTGCAGTTCACAACCAGAAACTATTGATTCTTTTGGAAACAAGGATCTTCCAGAAAATAAGCAAATTGATTCTCCAGTTTTTAGCTTTGTAAATAATGTCTCTCCACGAAAACAGCCAAACGCTAGTTCTACTGCATTTGATGTTAGGAATAAGGATGATTCTCTTACAGAATCATGTGTTGCTTCTGAAAATGGCAATGAACCTTCGTACGCTTACACGCAGTGTAATCCAGCTTCTTCAAACCATAAGCTAGATTGCTCTTGGAGGTCAGTATATTCATTTCGTTCTTCTATTCAGACATATAGTTTTGTAGTCTTTCCGTTATCTTCTATCAATTAGAGAAACATATGCAAGTTTCCTTTGGTTTTGAGTAGGTTGATAGCTTGTCTCCCCTTTTTTCTACTTCTCATTCATTAATGAAAAGCTCTTTCTTATATTTAATTTTAAAAAAAAAAAACTGTTGGAAGTATTGAAGATTCCTTCTAACTGGATGTGAATTTAATGGAAAGAGAATCATTTGTCAAAGTTATTAAGGGAAGAAAAGAACATTAAAGCACGTTCCTCCCCAAATGCTAAATGACATTTGTTTGAAAATTTGTCATTTGATCTTTCTTTATTTCTTACATCATTTTTGCACTCGTTCACTTTTTATATCTAGAAAACTTTTACTGTTCACGCAAATGAGTTTATTGAAGAATCTGCATCATGTAAAACTGATAGTGATGATATTTCAAATTTTCTTTTTACCAGAACTTGCAATGATCCATTCTCATCCTCTGCTTCCATATCAGCTGGACTTGCATTCTCATTTAGCTCGACTCCTAGCCATCAAAGTCTAAATTGTGGCCTTTCTATTTCATGTCCATCTCTATACTCTTCCTACTGTCCACCAACAGGGTTTATGAGTCAAAGTTCATCCAGAAATATCTTCCTCTCTGCCACGTGTGCCAGTAACAATGCTAATATAACCACAACTCTGGCATCTTCATTTGCTCCATCAACTTCGGGCACAGGAAGTTACGAAGACAAGATCAAGCAGGATACGACCCTGCACAATGTAAATGACACGTATCTCAGTAGCATAACTACACCTGCAAATTCTCACTATAGTATGTTCAACTTTGGTTCTGCACCGACGCCTTCATTACCTACTGTTAGCAGTGCAACTGAGCTTAGTGCTCAGGAAGTTTCAGCTGGAAAGGAACTTATAGCTAATGCGGAAAGAACATCCATGATTTTAGGATCATCCATGTCGCATGTATCAACAGGGATGGCTGGAAAAGTATCCGTCTTTTCTGGCATTACTTTTGGGTGCTCATCTCCTGCTTCTGAACTGTTTAATTCAGGAAGCAGGCCATCAGAATTTCCCATCACTGGGTTGACTAGTGCCCCAGCAACTTCAACCATTTTTACCTCCAATGTTTCTACTTCTGTGACATGTCTTGGATTCGAGTCATTTACAGGGGCATCTTTCAGTTCCATATGTTCTACTACCTCAGCAGCAGCATTAGCAAGTTCCTCATCAAAGCCTGTTTTCAGTAATTCTCATCCCAAAGTTGCTTTTAGAGTTCCTTCAGGTAACAATGACTGTGAAGAGCAGGGTATCTCCAAGGACAATGTTCCACTTTTCAGTCAAAAGCCAATCCCACCACCTTCATCAGGATTCTCTTTTGGTCCAGGCGGTGCAGGCACATCTGAATTAAATCCCTTTCAAGTTAAGCAGCAGACTTTGGCTGAACCGCAAAATTCTTATCCATATATTGCTTCTTCTAGCAGCCTAGAAGCTAAGGCTGGAGGCAGCTTCTCCTTGAATGCTGGTGGCCGCGACAAGTCTAATCGGAGATTTGTGACGGTCAAACGAAAGAAATGA
mRNA sequence
ATGGCGTCTGCGAAGGGACAGAAAAGCCCAGAAGAAGAAGGGTTGGGAACGGTTGGGAAGTTTATAGATGAAAGATTCCTTAGGAAATCGCCGGCGAAACCTTATGATCGGCCGCCGACTGCCTTAAGAACGTCTAGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCGGCTCAAAGGCTCATTTCCTCTAGTTCTCAGATGTTTTTTTCCTCTCTGATCCGAAATTTCCCTCACCATTTAACGTCTCGTGTTTCGTCCCAAGAATCAAGCCAGTCAAGAAAGGATGACAAGAAGGCCGATGTAACTTATGGTTTCAGTAACTTTTGGTGCTTCCATCTTTTGGTTTGCATTGTTTCTGTTTCCTACATTTTCCTTTGTAGTGAAATGTCTGAGATTGATCATTTGACAACCCTATTGCAGTCAAGAAATGTTGATTTACCTGTTGTGAATGAGGAGAAAAGGTGTATCTCTTCTATTCCAGAATCTAACAGGAAGGAGTTTGTAAAAATACCAAATTCAGAAGTCCTTGATGAAGATATTTCAAAACCTGCAGAGATAGCAAGGGAATATATGGGCAGTAGACAGCCAAAAGTTTGTCCTTCAAGACGATCTTTGCAAGCTCAAGGACTTGGGGAAAATTCAGCTGATCCAACTAGGATATCATTGTCTTCAAAATCAATCAGTATGTTGCTTGCGCCATCATCTACTAGTCAGGGTTTGAAACGTAGGAGCTCATTTTTTGATGAACACATTGGACCTGTTGTTCCTTTGCGCAGAACTCAACAAAAACCTAACATTCATCTATCAAAGGGATTAAGCTTACCTGTTTCTGCTGGACCTATTTTTGTCCCTGAAGATGGTCTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGGGAGAACTCAGAATTTTCCATCTTCTATTTGGAACTCACAACTGTCTCTTAAACACAAGAAAACTTTTGCAAGAAAGTTCATTAAGAACATGGAGAGTGATAACATTCCTGGTGCAGGTAGTAGCTCTATTTATACTCCTTCAAGGTCTTCTAAGATGGCTTCTAAAATATTGGAGCAGCTCGATAAGTTGACCTCTCCAAAGGAGAAAGTATCTACATTTAGTCGACTTCCTGTTGGGGAAAAATATCACCCTAAGCTATCACCCCTCACAGTAGGTGGGCATCTCAAAAGTGTGAAGGATGTGGACTTACCCAGAAATGAAGAATTTGTTCATGACGATAAGCAGTCAAATAGTTTGTATGGGATCTCATATCAACACAACCGAGAAAACACTTTCCAAAATAAAGAGAAGCTGGAAAAACTGAAACCATTGGATCCTCATCCTAGATGTGCTCTACTGAAGGACTCTGGGTCAATAGGTTCTAGTAAGGATTCCATTAATGATCTAGGAGTGCCTGCATCTGCTGTGGTGAAATCTACTATTCAGCTCCCAAAAGACAAACGGGCATTTCCGATGTCGCCTGACAAGGATAGTGTTGACCAAGATGAAAGTTCTGCTGATAGAGTTGCACCTTCTTCCGCTGAGGTTAGAGAAGGTGACATTTCTTTGGCCGTGAGACAAACAACTGCCAATGAAGCCCTTGCTCCAGCAAAGCCGCAAACTACATCTGAACTGATAGTGGGTTCTCTCAACAGAAGTTCTGATTTGAAAACTTCTGAAGACAGCATTGATGATGATATCGATGCCAGACTTACTTTTCAAAATGCATCCTCACTTTGCAGTTCACAACCAGAAACTATTGATTCTTTTGGAAACAAGGATCTTCCAGAAAATAAGCAAATTGATTCTCCAGTTTTTAGCTTTGTAAATAATGTCTCTCCACGAAAACAGCCAAACGCTAGTTCTACTGCATTTGATGTTAGGAATAAGGATGATTCTCTTACAGAATCATGTGTTGCTTCTGAAAATGGCAATGAACCTTCGTACGCTTACACGCAGTGTAATCCAGCTTCTTCAAACCATAAGCTAGATTGCTCTTGGAGAACTTGCAATGATCCATTCTCATCCTCTGCTTCCATATCAGCTGGACTTGCATTCTCATTTAGCTCGACTCCTAGCCATCAAAGTCTAAATTGTGGCCTTTCTATTTCATGTCCATCTCTATACTCTTCCTACTGTCCACCAACAGGGTTTATGAGTCAAAGTTCATCCAGAAATATCTTCCTCTCTGCCACGTGTGCCAGTAACAATGCTAATATAACCACAACTCTGGCATCTTCATTTGCTCCATCAACTTCGGGCACAGGAAGTTACGAAGACAAGATCAAGCAGGATACGACCCTGCACAATGTAAATGACACGTATCTCAGTAGCATAACTACACCTGCAAATTCTCACTATAGTATGTTCAACTTTGGTTCTGCACCGACGCCTTCATTACCTACTGTTAGCAGTGCAACTGAGCTTAGTGCTCAGGAAGTTTCAGCTGGAAAGGAACTTATAGCTAATGCGGAAAGAACATCCATGATTTTAGGATCATCCATGTCGCATGTATCAACAGGGATGGCTGGAAAAGTATCCGTCTTTTCTGGCATTACTTTTGGGTGCTCATCTCCTGCTTCTGAACTGTTTAATTCAGGAAGCAGGCCATCAGAATTTCCCATCACTGGGTTGACTAGTGCCCCAGCAACTTCAACCATTTTTACCTCCAATGTTTCTACTTCTGTGACATGTCTTGGATTCGAGTCATTTACAGGGGCATCTTTCAGTTCCATATGTTCTACTACCTCAGCAGCAGCATTAGCAAGTTCCTCATCAAAGCCTGTTTTCAGTAATTCTCATCCCAAAGTTGCTTTTAGAGTTCCTTCAGGTAACAATGACTGTGAAGAGCAGGGTATCTCCAAGGACAATGTTCCACTTTTCAGTCAAAAGCCAATCCCACCACCTTCATCAGGATTCTCTTTTGGTCCAGGCGGTGCAGGCACATCTGAATTAAATCCCTTTCAAGTTAAGCAGCAGACTTTGGCTGAACCGCAAAATTCTTATCCATATATTGCTTCTTCTAGCAGCCTAGAAGCTAAGGCTGGAGGCAGCTTCTCCTTGAATGCTGGTGGCCGCGACAAGTCTAATCGGAGATTTGTGACGGTCAAACGAAAGAAATGA
Coding sequence (CDS)
ATGGCGTCTGCGAAGGGACAGAAAAGCCCAGAAGAAGAAGGGTTGGGAACGGTTGGGAAGTTTATAGATGAAAGATTCCTTAGGAAATCGCCGGCGAAACCTTATGATCGGCCGCCGACTGCCTTAAGAACGTCTAGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCGGCTCAAAGGCTCATTTCCTCTAGTTCTCAGATGTTTTTTTCCTCTCTGATCCGAAATTTCCCTCACCATTTAACGTCTCGTGTTTCGTCCCAAGAATCAAGCCAGTCAAGAAAGGATGACAAGAAGGCCGATGTAACTTATGGTTTCAGTAACTTTTGGTGCTTCCATCTTTTGGTTTGCATTGTTTCTGTTTCCTACATTTTCCTTTGTAGTGAAATGTCTGAGATTGATCATTTGACAACCCTATTGCAGTCAAGAAATGTTGATTTACCTGTTGTGAATGAGGAGAAAAGGTGTATCTCTTCTATTCCAGAATCTAACAGGAAGGAGTTTGTAAAAATACCAAATTCAGAAGTCCTTGATGAAGATATTTCAAAACCTGCAGAGATAGCAAGGGAATATATGGGCAGTAGACAGCCAAAAGTTTGTCCTTCAAGACGATCTTTGCAAGCTCAAGGACTTGGGGAAAATTCAGCTGATCCAACTAGGATATCATTGTCTTCAAAATCAATCAGTATGTTGCTTGCGCCATCATCTACTAGTCAGGGTTTGAAACGTAGGAGCTCATTTTTTGATGAACACATTGGACCTGTTGTTCCTTTGCGCAGAACTCAACAAAAACCTAACATTCATCTATCAAAGGGATTAAGCTTACCTGTTTCTGCTGGACCTATTTTTGTCCCTGAAGATGGTCTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGGGAGAACTCAGAATTTTCCATCTTCTATTTGGAACTCACAACTGTCTCTTAAACACAAGAAAACTTTTGCAAGAAAGTTCATTAAGAACATGGAGAGTGATAACATTCCTGGTGCAGGTAGTAGCTCTATTTATACTCCTTCAAGGTCTTCTAAGATGGCTTCTAAAATATTGGAGCAGCTCGATAAGTTGACCTCTCCAAAGGAGAAAGTATCTACATTTAGTCGACTTCCTGTTGGGGAAAAATATCACCCTAAGCTATCACCCCTCACAGTAGGTGGGCATCTCAAAAGTGTGAAGGATGTGGACTTACCCAGAAATGAAGAATTTGTTCATGACGATAAGCAGTCAAATAGTTTGTATGGGATCTCATATCAACACAACCGAGAAAACACTTTCCAAAATAAAGAGAAGCTGGAAAAACTGAAACCATTGGATCCTCATCCTAGATGTGCTCTACTGAAGGACTCTGGGTCAATAGGTTCTAGTAAGGATTCCATTAATGATCTAGGAGTGCCTGCATCTGCTGTGGTGAAATCTACTATTCAGCTCCCAAAAGACAAACGGGCATTTCCGATGTCGCCTGACAAGGATAGTGTTGACCAAGATGAAAGTTCTGCTGATAGAGTTGCACCTTCTTCCGCTGAGGTTAGAGAAGGTGACATTTCTTTGGCCGTGAGACAAACAACTGCCAATGAAGCCCTTGCTCCAGCAAAGCCGCAAACTACATCTGAACTGATAGTGGGTTCTCTCAACAGAAGTTCTGATTTGAAAACTTCTGAAGACAGCATTGATGATGATATCGATGCCAGACTTACTTTTCAAAATGCATCCTCACTTTGCAGTTCACAACCAGAAACTATTGATTCTTTTGGAAACAAGGATCTTCCAGAAAATAAGCAAATTGATTCTCCAGTTTTTAGCTTTGTAAATAATGTCTCTCCACGAAAACAGCCAAACGCTAGTTCTACTGCATTTGATGTTAGGAATAAGGATGATTCTCTTACAGAATCATGTGTTGCTTCTGAAAATGGCAATGAACCTTCGTACGCTTACACGCAGTGTAATCCAGCTTCTTCAAACCATAAGCTAGATTGCTCTTGGAGAACTTGCAATGATCCATTCTCATCCTCTGCTTCCATATCAGCTGGACTTGCATTCTCATTTAGCTCGACTCCTAGCCATCAAAGTCTAAATTGTGGCCTTTCTATTTCATGTCCATCTCTATACTCTTCCTACTGTCCACCAACAGGGTTTATGAGTCAAAGTTCATCCAGAAATATCTTCCTCTCTGCCACGTGTGCCAGTAACAATGCTAATATAACCACAACTCTGGCATCTTCATTTGCTCCATCAACTTCGGGCACAGGAAGTTACGAAGACAAGATCAAGCAGGATACGACCCTGCACAATGTAAATGACACGTATCTCAGTAGCATAACTACACCTGCAAATTCTCACTATAGTATGTTCAACTTTGGTTCTGCACCGACGCCTTCATTACCTACTGTTAGCAGTGCAACTGAGCTTAGTGCTCAGGAAGTTTCAGCTGGAAAGGAACTTATAGCTAATGCGGAAAGAACATCCATGATTTTAGGATCATCCATGTCGCATGTATCAACAGGGATGGCTGGAAAAGTATCCGTCTTTTCTGGCATTACTTTTGGGTGCTCATCTCCTGCTTCTGAACTGTTTAATTCAGGAAGCAGGCCATCAGAATTTCCCATCACTGGGTTGACTAGTGCCCCAGCAACTTCAACCATTTTTACCTCCAATGTTTCTACTTCTGTGACATGTCTTGGATTCGAGTCATTTACAGGGGCATCTTTCAGTTCCATATGTTCTACTACCTCAGCAGCAGCATTAGCAAGTTCCTCATCAAAGCCTGTTTTCAGTAATTCTCATCCCAAAGTTGCTTTTAGAGTTCCTTCAGGTAACAATGACTGTGAAGAGCAGGGTATCTCCAAGGACAATGTTCCACTTTTCAGTCAAAAGCCAATCCCACCACCTTCATCAGGATTCTCTTTTGGTCCAGGCGGTGCAGGCACATCTGAATTAAATCCCTTTCAAGTTAAGCAGCAGACTTTGGCTGAACCGCAAAATTCTTATCCATATATTGCTTCTTCTAGCAGCCTAGAAGCTAAGGCTGGAGGCAGCTTCTCCTTGAATGCTGGTGGCCGCGACAAGTCTAATCGGAGATTTGTGACGGTCAAACGAAAGAAATGA
Protein sequence
MASAKGQKSPEEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKLVDPAQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHLLVCIVSVSYIFLCSEMSEIDHLTTLLQSRNVDLPVVNEEKRCISSIPESNRKEFVKIPNSEVLDEDISKPAEIAREYMGSRQPKVCPSRRSLQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKPNIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARKFIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPKLSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLDPHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESSADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVGSLNRSSDLKTSEDSIDDDIDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTAFDVRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGLAFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTLASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSLPTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCSSPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTSAAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPGGAGTSELNPFQVKQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTVKRKK
Homology
BLAST of HG10015595 vs. NCBI nr
Match:
XP_038893389.1 (nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida])
HSP 1 Score: 1544.3 bits (3997), Expect = 0.0e+00
Identity = 865/1082 (79.94%), Postives = 914/1082 (84.47%), Query Frame = 0
Query: 1 MASAKGQKSP-EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKLVDPAQ 60
MA+A+ QKSP E+EGL TVGKF DERF+RK P KPYDRP T LRTS NNSWILKLVDPAQ
Sbjct: 1 MATAREQKSPVEKEGLETVGKFRDERFVRKPPVKPYDRPLTTLRTSGNNSWILKLVDPAQ 60
Query: 61 RLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGF------------- 120
RLISS S+M FSS+IRNFPHHLTSRVSSQESSQSRKDDKKA+V F
Sbjct: 61 RLISSGSRMLFSSVIRNFPHHLTSRVSSQESSQSRKDDKKANVNDPFEVKVVTNEGDNRS 120
Query: 121 -SNFWCFHLLVCIVSVSYIFLCSEMSEIDHLTTLLQSRNVDLPVVNEEKRC--ISSIPES 180
S+ C + + F SEIDHLTTLL SRNVDLPVVNEEKR ISSIPES
Sbjct: 121 RSSDQCLMMELEKTLKQKTF---TRSEIDHLTTLLHSRNVDLPVVNEEKRLKFISSIPES 180
Query: 181 NRKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRSLQ 240
NRKEFVKIPNSE VLDEDIS PAEIAR YMGS+QPKVCPS +SL+
Sbjct: 181 NRKEFVKIPNSEVRMGRPLISTPILSSSVLDEDISSPAEIARAYMGSKQPKVCPSMQSLR 240
Query: 241 AQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKPNI 300
AQGLGENSA PT I SSKS MLLAPSSTSQGLKRRSSFFD+HIGPVVPLRRT+QKPNI
Sbjct: 241 AQGLGENSAGPTSILFSSKSNDMLLAPSSTSQGLKRRSSFFDKHIGPVVPLRRTRQKPNI 300
Query: 301 HLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARKFI 360
HLSKGLSLPVSA PI VPEDGL+FDASQSSKFGR QNFPSSIWNSQL LK KKTF RKF
Sbjct: 301 HLSKGLSLPVSARPISVPEDGLNFDASQSSKFGRFQNFPSSIWNSQLPLKPKKTFGRKFT 360
Query: 361 KNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPKLS 420
N+E+ NIP AG+ SIYTPSRSSK+ASKILEQLDKLT PKEK+STF+RLPVGEK H KLS
Sbjct: 361 MNVENHNIPVAGTGSIYTPSRSSKIASKILEQLDKLTPPKEKISTFNRLPVGEKSHAKLS 420
Query: 421 PLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLDPH 480
PLTVGGHL++VKDVDLPRNEEFVHDDKQSNSL+GISYQ NRENTFQN EKLEKLK DPH
Sbjct: 421 PLTVGGHLRNVKDVDLPRNEEFVHDDKQSNSLHGISYQENRENTFQNGEKLEKLKSSDPH 480
Query: 481 PRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESSAD 540
P CALLKD+GSIGS KD +NDLGVPASAVVKSTI+ KDKRAFPMSPDKDSVDQDESSAD
Sbjct: 481 PSCALLKDTGSIGSCKDCMNDLGVPASAVVKSTIRPLKDKRAFPMSPDKDSVDQDESSAD 540
Query: 541 RVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSIDDD 600
+VAP++AE REGDISLAVRQTTANEALAPAKPQTTS++I+G SLNRSSDLKTS+DS DDD
Sbjct: 541 KVAPATAEAREGDISLAVRQTTANEALAPAKPQTTSQVIMGSSLNRSSDLKTSDDSFDDD 600
Query: 601 IDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTAFD 660
IDARLTFQNA SLC+ QPETIDSFGNKDLPENKQIDS VFSFVNN SP KQPNASSTAFD
Sbjct: 601 IDARLTFQNA-SLCTLQPETIDSFGNKDLPENKQIDSSVFSFVNNASPLKQPNASSTAFD 660
Query: 661 VRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGLAF 720
V NKDDSLTESC AS NG+EPSY YTQCN ASSNHKLDCSWRTCND FSSSASISAG AF
Sbjct: 661 VGNKDDSLTESCAASANGDEPSYPYTQCNLASSNHKLDCSWRTCNDAFSSSASISAGPAF 720
Query: 721 SFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTLAS 780
SFSSTPS+QSLN GLSISCPSL+SSY P TGFMSQSSSRNIFLSATCASNNANIT TL S
Sbjct: 721 SFSSTPSYQSLNSGLSISCPSLFSSYSPSTGFMSQSSSRNIFLSATCASNNANITATLPS 780
Query: 781 SFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL------ 840
SF PSTSG GSYEDKIKQD +LHNVNDTY S ITTPANSHYSMF+F SA PS
Sbjct: 781 SFVPSTSGIGSYEDKIKQDASLHNVNDTYFSCITTPANSHYSMFSFNSAAIPSFVTNLLR 840
Query: 841 -PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCSSP 900
PTVS ATELSA+EVSA KE AN+E+TS+ILGS MSHVS+GMA GCSSP
Sbjct: 841 APTVSCATELSAEEVSAVKEFTANSEKTSVILGSPMSHVSSGMA-----------GCSSP 900
Query: 901 ASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTSAA 960
ASELFNSGSRPSEFPITG TSAP TSTI SN+STS T LGFESFTGASFSS+ STTSAA
Sbjct: 901 ASELFNSGSRPSEFPITGFTSAPETSTIGKSNLSTSGTRLGFESFTGASFSSLNSTTSAA 960
Query: 961 ALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPGG 1020
ALA SSS+PV SNSHPKVAFRV GNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPG
Sbjct: 961 ALAGSSSEPVMSNSHPKVAFRVSLGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPGS 1020
Query: 1021 AGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTVKR 1041
AGTSELNPFQV KQQTLAEPQNSYPYIASSSSLEAKA GSFSLNAG DKS RRFV VKR
Sbjct: 1021 AGTSELNPFQVGKQQTLAEPQNSYPYIASSSSLEAKAEGSFSLNAGSSDKSKRRFVKVKR 1067
BLAST of HG10015595 vs. NCBI nr
Match:
XP_038893390.1 (nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 1437.2 bits (3719), Expect = 0.0e+00
Identity = 820/1082 (75.79%), Postives = 866/1082 (80.04%), Query Frame = 0
Query: 1 MASAKGQKSP-EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKLVDPAQ 60
MA+A+ QKSP E+EGL TVGKF DERF+RK P KPYDRP T LRTS NNSWILKLVDPAQ
Sbjct: 1 MATAREQKSPVEKEGLETVGKFRDERFVRKPPVKPYDRPLTTLRTSGNNSWILKLVDPAQ 60
Query: 61 RLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGF------------- 120
RLISS S+M FSS+IRNFPHHLTSRVSSQESSQSRKDDKKA+V F
Sbjct: 61 RLISSGSRMLFSSVIRNFPHHLTSRVSSQESSQSRKDDKKANVNDPFEVKVVTNEGDNRS 120
Query: 121 -SNFWCFHLLVCIVSVSYIFLCSEMSEIDHLTTLLQSRNVDLPVVNEEKRC--ISSIPES 180
S+ C + + F SEIDHLTTLL SRNVDLPVVNEEKR ISSIPES
Sbjct: 121 RSSDQCLMMELEKTLKQKTF---TRSEIDHLTTLLHSRNVDLPVVNEEKRLKFISSIPES 180
Query: 181 NRKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRSLQ 240
NRKEFVKIPNSE VLDEDIS PAEIAR YMGS+QPKVCPS +SL+
Sbjct: 181 NRKEFVKIPNSEVRMGRPLISTPILSSSVLDEDISSPAEIARAYMGSKQPKVCPSMQSLR 240
Query: 241 AQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKPNI 300
AQGLGENSA PT I SSKS MLLAPSSTSQGLKRRSSFFD+HIGPVVPLRRT+QKPNI
Sbjct: 241 AQGLGENSAGPTSILFSSKSNDMLLAPSSTSQGLKRRSSFFDKHIGPVVPLRRTRQKPNI 300
Query: 301 HLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARKFI 360
HLSKGLSLPVSA PI VPEDGL+FDASQSSKFGR QNFPSSIWNSQL LK KKTF RKF
Sbjct: 301 HLSKGLSLPVSARPISVPEDGLNFDASQSSKFGRFQNFPSSIWNSQLPLKPKKTFGRKFT 360
Query: 361 KNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPKLS 420
N+E+ NI
Sbjct: 361 MNVENHNI---------------------------------------------------- 420
Query: 421 PLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLDPH 480
P+ VGGHL++VKDVDLPRNEEFVHDDKQSNSL+GISYQ NRENTFQN EKLEKLK DPH
Sbjct: 421 PVAVGGHLRNVKDVDLPRNEEFVHDDKQSNSLHGISYQENRENTFQNGEKLEKLKSSDPH 480
Query: 481 PRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESSAD 540
P CALLKD+GSIGS KD +NDLGVPASAVVKSTI+ KDKRAFPMSPDKDSVDQDESSAD
Sbjct: 481 PSCALLKDTGSIGSCKDCMNDLGVPASAVVKSTIRPLKDKRAFPMSPDKDSVDQDESSAD 540
Query: 541 RVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSIDDD 600
+VAP++AE REGDISLAVRQTTANEALAPAKPQTTS++I+G SLNRSSDLKTS+DS DDD
Sbjct: 541 KVAPATAEAREGDISLAVRQTTANEALAPAKPQTTSQVIMGSSLNRSSDLKTSDDSFDDD 600
Query: 601 IDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTAFD 660
IDARLTFQNA SLC+ QPETIDSFGNKDLPENKQIDS VFSFVNN SP KQPNASSTAFD
Sbjct: 601 IDARLTFQNA-SLCTLQPETIDSFGNKDLPENKQIDSSVFSFVNNASPLKQPNASSTAFD 660
Query: 661 VRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGLAF 720
V NKDDSLTESC AS NG+EPSY YTQCN ASSNHKLDCSWRTCND FSSSASISAG AF
Sbjct: 661 VGNKDDSLTESCAASANGDEPSYPYTQCNLASSNHKLDCSWRTCNDAFSSSASISAGPAF 720
Query: 721 SFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTLAS 780
SFSSTPS+QSLN GLSISCPSL+SSY P TGFMSQSSSRNIFLSATCASNNANIT TL S
Sbjct: 721 SFSSTPSYQSLNSGLSISCPSLFSSYSPSTGFMSQSSSRNIFLSATCASNNANITATLPS 780
Query: 781 SFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL------ 840
SF PSTSG GSYEDKIKQD +LHNVNDTY S ITTPANSHYSMF+F SA PS
Sbjct: 781 SFVPSTSGIGSYEDKIKQDASLHNVNDTYFSCITTPANSHYSMFSFNSAAIPSFVTNLLR 840
Query: 841 -PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCSSP 900
PTVS ATELSA+EVSA KE AN+E+TS+ILGS MSHVS+GMA GCSSP
Sbjct: 841 APTVSCATELSAEEVSAVKEFTANSEKTSVILGSPMSHVSSGMA-----------GCSSP 900
Query: 901 ASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTSAA 960
ASELFNSGSRPSEFPITG TSAP TSTI SN+STS T LGFESFTGASFSS+ STTSAA
Sbjct: 901 ASELFNSGSRPSEFPITGFTSAPETSTIGKSNLSTSGTRLGFESFTGASFSSLNSTTSAA 960
Query: 961 ALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPGG 1020
ALA SSS+PV SNSHPKVAFRV GNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPG
Sbjct: 961 ALAGSSSEPVMSNSHPKVAFRVSLGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPGS 1015
Query: 1021 AGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTVKR 1041
AGTSELNPFQV KQQTLAEPQNSYPYIASSSSLEAKA GSFSLNAG DKS RRFV VKR
Sbjct: 1021 AGTSELNPFQVGKQQTLAEPQNSYPYIASSSSLEAKAEGSFSLNAGSSDKSKRRFVKVKR 1015
BLAST of HG10015595 vs. NCBI nr
Match:
TYK09186.1 (nuclear pore complex protein NUP1 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1394.8 bits (3609), Expect = 0.0e+00
Identity = 804/1084 (74.17%), Postives = 879/1084 (81.09%), Query Frame = 0
Query: 1 MASAKGQKSP------EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKL 60
M +A+ QK+P EEE LGTVGKFIDERF++KSPAKPYDRPP +RT+ NNSWILKL
Sbjct: 1 MVTARQQKNPEEKEEDEEERLGTVGKFIDERFVKKSPAKPYDRPPNGIRTTGNNSWILKL 60
Query: 61 VDPAQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHL 120
VDPAQRLISS S+M FSS+IRNFP HLTSRVSSQESSQSRKDDKKADVT F F++
Sbjct: 61 VDPAQRLISSGSRMLFSSVIRNFPTHLTSRVSSQESSQSRKDDKKADVTGPFEVQVAFNV 120
Query: 121 ------------------------LVCIVSVSY---IFLCSEMSEIDHLTTLLQSRNVDL 180
IVSV++ IF SEIDHLTTLL SRN DL
Sbjct: 121 GDNRSRSSDQFLMMELEKTLKQKTFSSIVSVTFGASIF----WSEIDHLTTLLHSRNGDL 180
Query: 181 PVVNEEK--RCISSIPESNRKEFVKIPNSEVLDEDISKPAEIAREYMGSRQPKVCPSRRS 240
P VNEEK + ISSIPE NRKEFVKIPNSEVLD DIS PAE+AR YMGSR+ KVCPS+RS
Sbjct: 181 PGVNEEKSFKFISSIPEPNRKEFVKIPNSEVLDGDISSPAEVARAYMGSRESKVCPSKRS 240
Query: 241 LQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKP 300
L+AQGLGENS + T +S SKS +MLLAP S S+G KRRSSF D HI +V LRR +QKP
Sbjct: 241 LRAQGLGENSTNSTSLSFYSKSNNMLLAPPSISRGSKRRSSFLDNHIKSIVSLRRIRQKP 300
Query: 301 NIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARK 360
NIHLSKGLSLP+S VP GLSFDASQSSKFGRT+NFPS IWNSQLS K KTFARK
Sbjct: 301 NIHLSKGLSLPIS-----VPVVGLSFDASQSSKFGRTRNFPSCIWNSQLSPKPNKTFARK 360
Query: 361 FIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPK 420
FI N+ SDNI GA SSIYT +RSSKMASKILEQL+KLT PKEKVSTF+RLPVGEKYH K
Sbjct: 361 FITNVGSDNILGASCSSIYTLTRSSKMASKILEQLEKLTPPKEKVSTFNRLPVGEKYHSK 420
Query: 421 LSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLD 480
LSP V GHLKSVKDVDLPRNEEFV+DDKQSNSL GISYQ NREN+FQ+KE+LEKLK D
Sbjct: 421 LSPPEVVGHLKSVKDVDLPRNEEFVYDDKQSNSLLGISYQGNRENSFQHKERLEKLKSSD 480
Query: 481 PHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESS 540
PHP LLKDSGSIGS+ DS+ND G+P SAV KSTIQ PKDK+AFPM PD+DSVDQDESS
Sbjct: 481 PHPSRDLLKDSGSIGSTNDSMNDQGMPESAVGKSTIQPPKDKQAFPMLPDEDSVDQDESS 540
Query: 541 ADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSID 600
ADRVAP++AEVREGD+SLAVRQTTANE+++PA+ Q +SE+IVG SL+ SSD +T DSID
Sbjct: 541 ADRVAPATAEVREGDVSLAVRQTTANESVSPARLQKSSEVIVGSSLDGSSDSETFGDSID 600
Query: 601 DDIDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTA 660
DDID RLT Q ASSL +SQPE IDSFGNK LPENKQI SPVFSFVN+VSPRKQ ASSTA
Sbjct: 601 DDIDTRLTVQIASSLRTSQPEAIDSFGNKILPENKQIVSPVFSFVNDVSPRKQLIASSTA 660
Query: 661 FDVRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGL 720
D+ NKDDSLTE C ENGNEPSY YTQCNPASSN KLD SWRTCND FSSS S+SAGL
Sbjct: 661 LDIGNKDDSLTELCADFENGNEPSYPYTQCNPASSNDKLDFSWRTCNDAFSSSVSVSAGL 720
Query: 721 AFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTL 780
AFSFSSTP HQSLN GLSISCPSLYSSY P TGFM+QSSSRNIFLSA CA NN NI TTL
Sbjct: 721 AFSFSSTPGHQSLNNGLSISCPSLYSSYSPSTGFMNQSSSRNIFLSAPCAINNTNIITTL 780
Query: 781 ASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL---- 840
ASSFA +TSGTGSY DKIK+D +L NVNDTY SSITTPANSHYSMF+FGSA TPS
Sbjct: 781 ASSFASTTSGTGSY-DKIKRDESLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTNL 840
Query: 841 ---PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCS 900
PTVSSAT LSAQEVS GK+ IANAERTSMILGSSMSHVS+GMAGK S+ G++F CS
Sbjct: 841 LSKPTVSSATGLSAQEVSVGKKFIANAERTSMILGSSMSHVSSGMAGKASLCCGLSFECS 900
Query: 901 SPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTS 960
SPASE FNSGSRPSEFPIT TSAPATSTI TSNVSTS T LGFESFTGASFSS+ +TS
Sbjct: 901 SPASERFNSGSRPSEFPITAFTSAPATSTISTSNVSTSSTLLGFESFTGASFSSLRCSTS 960
Query: 961 AAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGP 1020
AAALA S+ PV SNSHPKVAF+V S NN+CEEQG SKDNVPLFSQKP SG S
Sbjct: 961 AAALADST--PVLSNSHPKVAFKVSSVNNNCEEQGTSKDNVPLFSQKPKFSSGSGPS--- 1020
Query: 1021 GGAGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTV 1041
G AGTSEL FQV KQQTLAEPQNSYPYIA+S+SL+AK+GGSFSLNAGG DK+NRRFV
Sbjct: 1021 GSAGTSELTSFQVGKQQTLAEPQNSYPYIAASNSLQAKSGGSFSLNAGGSDKANRRFVKF 1069
BLAST of HG10015595 vs. NCBI nr
Match:
XP_008446727.1 (PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Cucumis melo] >XP_008446728.1 PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Cucumis melo] >KAA0034635.1 nuclear pore complex protein NUP1 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1390.6 bits (3598), Expect = 0.0e+00
Identity = 803/1084 (74.08%), Postives = 876/1084 (80.81%), Query Frame = 0
Query: 1 MASAKGQKSP------EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKL 60
M +A+ QK+P EEE LGTVGKFIDERF++KSPAKPYDRPP +RT+ NNSWILKL
Sbjct: 1 MVTARQQKNPEEKEEDEEERLGTVGKFIDERFVKKSPAKPYDRPPNGIRTTGNNSWILKL 60
Query: 61 VDPAQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHL 120
VDPAQRLISS S+M FSS+IRNFP HLTSRVSSQESSQSRKDDKKADVT F F++
Sbjct: 61 VDPAQRLISSGSRMLFSSVIRNFPTHLTSRVSSQESSQSRKDDKKADVTGPFEVQVAFNV 120
Query: 121 LVCIVSVSYIFLCSEM-----------SEIDHLTTLLQSRNVDLPVVNEEK--RCISSIP 180
S FL E+ SEIDHLTTLL SRN DLP VNEEK + ISSIP
Sbjct: 121 GDNRSRSSDQFLMMELEKTLKQKTFSRSEIDHLTTLLHSRNGDLPGVNEEKSFKFISSIP 180
Query: 181 ESNRKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRS 240
E NRKEFVKIPNSE VLD DIS PAE+AR YMGSR+ KVCPS+RS
Sbjct: 181 EPNRKEFVKIPNSEVRMGRPSISPPILCSSVLDGDISSPAEVARAYMGSRESKVCPSKRS 240
Query: 241 LQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKP 300
L+AQGLGENS + T +S SKS +MLLAP S S+G KRRSSF D HI +V LRR +QKP
Sbjct: 241 LRAQGLGENSTNSTSLSFYSKSNNMLLAPPSISRGSKRRSSFLDNHIKSIVSLRRIRQKP 300
Query: 301 NIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARK 360
NIHLSKGLSLP+S VP GLSFDASQSSKFGRT+NFPS IWNSQLS K KTFARK
Sbjct: 301 NIHLSKGLSLPIS-----VPVVGLSFDASQSSKFGRTRNFPSCIWNSQLSPKPNKTFARK 360
Query: 361 FIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPK 420
FI N+ SDNI GA SSIYT +RSSKMASKILEQL+KLT PKEKVSTF+RLPVGEKYH K
Sbjct: 361 FITNVGSDNILGASCSSIYTLTRSSKMASKILEQLEKLTPPKEKVSTFNRLPVGEKYHSK 420
Query: 421 LSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLD 480
LSP V GHLKSVKDVDLPRNEEFV+DDKQSNSL GISYQ NREN+FQ+KE+LEKLK D
Sbjct: 421 LSPPEVVGHLKSVKDVDLPRNEEFVYDDKQSNSLLGISYQGNRENSFQHKERLEKLKSSD 480
Query: 481 PHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESS 540
PHP LLKDSGSIGS+ DS+ND G+P SAV KSTIQ PKDK+AFPM PD+DSVDQDESS
Sbjct: 481 PHPSRDLLKDSGSIGSTNDSMNDQGMPESAVGKSTIQPPKDKQAFPMLPDEDSVDQDESS 540
Query: 541 ADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSID 600
ADRVAP++AEVREGD+SLAVRQTTANE+++PA+ Q +SE+IVG SL+ SSD +T DSID
Sbjct: 541 ADRVAPATAEVREGDVSLAVRQTTANESVSPARLQKSSEVIVGSSLDGSSDSETFGDSID 600
Query: 601 DDIDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTA 660
DDID RLT Q ASSL +SQPE IDSFGNK LPENKQI SPVFSFVNNVSPRKQ ASSTA
Sbjct: 601 DDIDTRLTVQIASSLRTSQPEAIDSFGNKILPENKQIVSPVFSFVNNVSPRKQLIASSTA 660
Query: 661 FDVRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGL 720
D+ NKDDSLTE C ENGNEPSY YTQCNPASSN KLD SWRTCND FSSS S+SAGL
Sbjct: 661 LDIGNKDDSLTELCADFENGNEPSYPYTQCNPASSNDKLDFSWRTCNDAFSSSVSVSAGL 720
Query: 721 AFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTL 780
AFSFSSTP HQSLN GLSISCPSLYSSY P TGFM+QSSSRNIFLSA CA NN NI TTL
Sbjct: 721 AFSFSSTPGHQSLNNGLSISCPSLYSSYSPSTGFMNQSSSRNIFLSAPCAINNTNIITTL 780
Query: 781 ASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL---- 840
ASSFA +TSGTGSY DKIK+D +L NVNDTY SSITTPANSHYSMF+FGSA TPS
Sbjct: 781 ASSFASTTSGTGSY-DKIKRDESLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTNL 840
Query: 841 ---PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCS 900
PTVSSAT LSAQEVS GK+ IANAERTSMILGSSMSHVS+GMAGK S+ G++F CS
Sbjct: 841 LSKPTVSSATGLSAQEVSVGKKFIANAERTSMILGSSMSHVSSGMAGKASLCCGLSFECS 900
Query: 901 SPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTS 960
SPASE FNSGSRPSEFPIT TSAPATSTI TSNVSTS T LGFESFTGASFSS+ +TS
Sbjct: 901 SPASERFNSGSRPSEFPITAFTSAPATSTISTSNVSTSSTLLGFESFTGASFSSLRCSTS 960
Query: 961 AAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGP 1020
AAALA S+ PV SNSHPKVAF+V S NN+CEEQG SKDNVPLFSQKP SG S
Sbjct: 961 AAALADST--PVLSNSHPKVAFKVSSVNNNCEEQGTSKDNVPLFSQKPKFSSGSGPS--- 1020
Query: 1021 GGAGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTV 1041
G AGTSEL FQV KQQTLAEPQNSYPYIA+S+SL+AK+GGSFSLNAGG DK+NRRFV
Sbjct: 1021 GSAGTSELTSFQVGKQQTLAEPQNSYPYIAASNSLQAKSGGSFSLNAGGSDKANRRFVKF 1073
BLAST of HG10015595 vs. NCBI nr
Match:
XP_011656263.1 (nuclear pore complex protein NUP1 [Cucumis sativus] >XP_031741373.1 nuclear pore complex protein NUP1 [Cucumis sativus] >KAE8648811.1 hypothetical protein Csa_009344 [Cucumis sativus])
HSP 1 Score: 1358.2 bits (3514), Expect = 0.0e+00
Identity = 790/1084 (72.88%), Postives = 860/1084 (79.34%), Query Frame = 0
Query: 1 MASAKGQKSPE---EEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKLVDP 60
M +A+ QK+ E EEGLG V K IDERF++KSP KPYDRPP +RTS NNSWILKLVDP
Sbjct: 1 MVTARQQKNLEEEDEEGLGRVRKLIDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDP 60
Query: 61 AQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHLLVC 120
QRLISS S+M FSS+IR FPHHLTSRVSSQESSQSRKDD K DVT F ++
Sbjct: 61 GQRLISSGSRMLFSSVIRKFPHHLTSRVSSQESSQSRKDDNKVDVTAPFEVRVATNVGDN 120
Query: 121 IVSVSYIFLCSEM-----------SEIDHLTTLLQSRNVDLPVVNEEK--RCISSIPESN 180
S FL E+ SEI+HLTTLL SRN DLPVV++EK + ISSIPE N
Sbjct: 121 RSRSSDQFLMMELEKTLKQKTFTRSEINHLTTLLHSRNGDLPVVHKEKSFKFISSIPEPN 180
Query: 181 RKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRSLQA 240
RKEFVKIPNSE VLD DIS PAE+AR YMGSR+ KVCPS RSL+A
Sbjct: 181 RKEFVKIPNSEVRMGRPSISTPILSSSVLDGDISSPAEVARAYMGSRESKVCPSMRSLRA 240
Query: 241 QGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKPNIH 300
QGLG+NS D T ++ +MLLAP S SQGLKRRSSF D HI +V LR+ +QKPNIH
Sbjct: 241 QGLGKNSTDSTSLT------NMLLAPPSISQGLKRRSSFLDNHIRSIVSLRKIRQKPNIH 300
Query: 301 LSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARKFIK 360
LSKGLSLP+SA PI VP GLSFDASQSSKFGRTQNFPS IWNSQLS K KTFARKFI
Sbjct: 301 LSKGLSLPISARPISVPVVGLSFDASQSSKFGRTQNFPSCIWNSQLSTKPNKTFARKFIT 360
Query: 361 NMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPKLSP 420
N+ESDNIPGAGSSSIYT SRSSKMASKILEQL+KLTSPKEKVSTF+ LPV EKYHPKLSP
Sbjct: 361 NVESDNIPGAGSSSIYTLSRSSKMASKILEQLEKLTSPKEKVSTFNLLPVREKYHPKLSP 420
Query: 421 LTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLDPHP 480
V GHLKSVKDVDLPR DDKQSNSL GISYQ NRENTFQ+KEKLEKLK DPHP
Sbjct: 421 AEVVGHLKSVKDVDLPR------DDKQSNSLLGISYQGNRENTFQHKEKLEKLKSSDPHP 480
Query: 481 RCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESSADR 540
LLKD GS+GSSKDS+ND G+P SAVVKSTIQ PKDK+AFPM PDKDSV QDESSA R
Sbjct: 481 NRDLLKDYGSMGSSKDSMNDQGMPESAVVKSTIQPPKDKQAFPMLPDKDSVYQDESSAAR 540
Query: 541 VAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSIDDDI 600
VAP++AEVREGD+SLAVRQTTANE+L+PA+ Q SE+IVG SL SSD +T DSIDDDI
Sbjct: 541 VAPATAEVREGDVSLAVRQTTANESLSPARIQKPSEVIVGSSLYGSSDSETFGDSIDDDI 600
Query: 601 DARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTAFDV 660
D LTFQNASSLC+SQPET DSFGNK+LPENKQI SPVFSFVNNVSPRKQP ASS A D+
Sbjct: 601 DTGLTFQNASSLCTSQPETNDSFGNKNLPENKQIVSPVFSFVNNVSPRKQPIASSAALDI 660
Query: 661 RNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGLAFS 720
NKDDSLTE C SEN NEPSY YTQCNPASSN KLD SWRTCND FSSS S+SAGLAFS
Sbjct: 661 GNKDDSLTELCADSENVNEPSYPYTQCNPASSNDKLDSSWRTCNDAFSSSVSLSAGLAFS 720
Query: 721 FSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTLASS 780
FSS P +QS N GLSISCPSLYSSY P TGFM++SSSRNIFLSA A NNANI TT+AS
Sbjct: 721 FSSNPGNQSPNDGLSISCPSLYSSYSPSTGFMNRSSSRNIFLSAPYAINNANIITTMASL 780
Query: 781 FAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL------- 840
F+P+TSG GSYED+IKQD +L NVNDTY SSITTPANSHYSMF+FGSA TPS
Sbjct: 781 FSPTTSGAGSYEDEIKQDASLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTNLLSK 840
Query: 841 PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCSSPA 900
PTVSSATELSA +VS KE IANAE+TSMIL SS SHVS+GMAGK SV G++FGCSSPA
Sbjct: 841 PTVSSATELSAPDVSVEKEFIANAEKTSMILESSTSHVSSGMAGKASVCCGLSFGCSSPA 900
Query: 901 SELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTSAAA 960
SE FNSG+RPSEFPITG TSA ATSTI TSNVSTS T L FESFTGASFSSI TTSAAA
Sbjct: 901 SEQFNSGNRPSEFPITGFTSAHATSTISTSNVSTSSTLLEFESFTGASFSSIRCTTSAAA 960
Query: 961 LASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGPGGA 1020
LA+S+ PV SNS+PKVAF V S NNDCEEQG SKDNVPLFSQKP FSF G+
Sbjct: 961 LANST--PVLSNSYPKVAFSVSSVNNDCEEQGTSKDNVPLFSQKP------KFSF---GS 1020
Query: 1021 GTSELNPFQV----KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTV 1041
GTSEL FQV QQTLAEPQNSYPY+A+S+SLEAKAGGSFSLNAGG DK+NRR V
Sbjct: 1021 GTSELTLFQVGKLENQQTLAEPQNSYPYMAASNSLEAKAGGSFSLNAGGSDKANRRSVKF 1061
BLAST of HG10015595 vs. ExPASy Swiss-Prot
Match:
Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 1.9e-30
Identity = 342/1363 (25.09%), Postives = 510/1363 (37.42%), Query Frame = 0
Query: 2 ASAKGQKS-PEEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTS-------RNNSWILK 61
++A+G+ S P GLGT GKF + R+S PYDRP T++R + R W+ K
Sbjct: 3 SAARGESSNPYGGGLGTGGKF-RKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSK 62
Query: 62 LVDPAQRLISSSSQMFFSSLIR-------------NFPHHLTSRVSSQESSQSRKDD-KK 121
LVDPAQRLI+ S+Q F SL R L R +QE+ K+D
Sbjct: 63 LVDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVSN 122
Query: 122 ADVTYGFSNFWCFHLLVCIVSVSYIFL-------CSEMSEIDHLTTLLQSRNVDLPVVNE 181
+ G + V + L SE+D LTTLL+S+ D +NE
Sbjct: 123 LSMKNGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNE 182
Query: 182 EKR----CISSIPESNRKEFVKIPNSEV-------------LDEDISKPAEIAREYMGSR 241
E+R + P S+ ++ N + LDE I+ PA++A+ YMGSR
Sbjct: 183 EQRNEVGMVVRHPPSHERDRTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGSR 242
Query: 242 QPKVCPSRRSLQAQGLGENSADPTRISLSSKSISMLLA---------------------- 301
+V PS L+ Q E+S R KS +M L
Sbjct: 243 PSEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPLENGFVTPRSRGRS 302
Query: 302 ----------------------------------PSSTSQ----GLKRRSSFFDEHIGPV 361
PS + Q GLKRRSS D IG V
Sbjct: 303 AVYSMARTPYSRPQSSVKIGSLFQASPSKWEESLPSGSRQGFQSGLKRRSSVLDNDIGSV 362
Query: 362 VPLRRTQQKPNIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLS 421
P+RR +QK N+ S+ L+LPVS P+ V +G
Sbjct: 363 GPVRRIRQKSNLS-SRSLALPVSESPLSVRANG--------------------------- 422
Query: 422 LKHKKTFARKFIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSR 481
K T K +++IP GSS P++SS+MASKIL+QLDKL S +EK +
Sbjct: 423 -GEKTTHTSK----DSAEDIP--GSSFNLVPTKSSEMASKILQQLDKLVSTREKSPS--- 482
Query: 482 LPVGEKYHPKLSP-LTVGGHLKSVKDVDLPRNEEFVHD--DKQSNSLYGISYQHNRENTF 541
KLSP + G LKS+++V+ P+ F+ + +K++NS SYQ
Sbjct: 483 ---------KLSPSMLRGPALKSLQNVEAPK---FLGNLPEKKANS-PDSSYQKQE---- 542
Query: 542 QNKEKLEKLKPLDPHPRCALLKDSGSIGSSKD-SINDLGVPASAVVKSTIQLPKDKRAFP 601
++E + + + + GSSKD + GV + S + P KR+F
Sbjct: 543 ISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGV-YMPLTNSLEEHPPKKRSFR 602
Query: 602 MSPDKDSVDQDESSADRVAP-------SSAEVREGDISLAV--RQTTANEALAPAKPQTT 661
MS +D ++ D+ P ++ EV + IS+ + + T +EA+ +
Sbjct: 603 MSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISN 662
Query: 662 SELIVGSLNRSSDLKTSE------------DSIDDDIDARLTFQNASSLCSSQPETIDSF 721
+ G+ N S + + ++ + + + SS+ S +P + +
Sbjct: 663 GDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKR 722
Query: 722 GNKDLPE-------NKQIDSPVFSFVNNVSPR----KQPNASSTAFDVRNKDDSLTESCV 781
+ P+ N P +N S K SSTAF V TES
Sbjct: 723 IPLEEPKKPAAVFPNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAWAKPTESKK 782
Query: 782 ASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGLAF--SFSSTPSHQSL 841
N + + T P + N + + P S+ S+++ +F S S+ PS S+
Sbjct: 783 TFSNSASGAESSTSAAP-TLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISNIPSDNSV 842
Query: 842 N-----------------------------------CGLSISCPSLYSSYCPP------- 901
LS + P + P
Sbjct: 843 GDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPFKFGQPAAPFSAPAVS 902
Query: 902 -------------------------TGFMSQSSSRNIFLSATCASN-------------- 961
G S S I A A N
Sbjct: 903 ESSGQISKETEVKNATFGNTSTFKFGGMASADQSTGIVFGAKSAENKSRPGFVFGSSSVV 962
Query: 962 -NANITTTLASSFAPSTSGT-----------GSYEDKIKQDTTLHNV-NDTYLSSITTPA 1021
+ + + A++ AP +SG+ G+ KI + N N + +S
Sbjct: 963 GGSTLNPSTAAASAPESSGSLIFGVTSSSTPGTETSKISASSAATNTGNSVFGTSSFAFT 1022
Query: 1022 NSHYSMFNFGSAPTPS----LPTVSSATELS-------------AQEVSAGKELIANAER 1039
+S SM SA T S VSSA+ S AQ + G + +
Sbjct: 1023 SSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQASNLFGAGNAQTGNTGSGTTTSTQS 1082
BLAST of HG10015595 vs. ExPASy TrEMBL
Match:
A0A5D3CFP1 (Nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001780 PE=4 SV=1)
HSP 1 Score: 1394.8 bits (3609), Expect = 0.0e+00
Identity = 804/1084 (74.17%), Postives = 879/1084 (81.09%), Query Frame = 0
Query: 1 MASAKGQKSP------EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKL 60
M +A+ QK+P EEE LGTVGKFIDERF++KSPAKPYDRPP +RT+ NNSWILKL
Sbjct: 1 MVTARQQKNPEEKEEDEEERLGTVGKFIDERFVKKSPAKPYDRPPNGIRTTGNNSWILKL 60
Query: 61 VDPAQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHL 120
VDPAQRLISS S+M FSS+IRNFP HLTSRVSSQESSQSRKDDKKADVT F F++
Sbjct: 61 VDPAQRLISSGSRMLFSSVIRNFPTHLTSRVSSQESSQSRKDDKKADVTGPFEVQVAFNV 120
Query: 121 ------------------------LVCIVSVSY---IFLCSEMSEIDHLTTLLQSRNVDL 180
IVSV++ IF SEIDHLTTLL SRN DL
Sbjct: 121 GDNRSRSSDQFLMMELEKTLKQKTFSSIVSVTFGASIF----WSEIDHLTTLLHSRNGDL 180
Query: 181 PVVNEEK--RCISSIPESNRKEFVKIPNSEVLDEDISKPAEIAREYMGSRQPKVCPSRRS 240
P VNEEK + ISSIPE NRKEFVKIPNSEVLD DIS PAE+AR YMGSR+ KVCPS+RS
Sbjct: 181 PGVNEEKSFKFISSIPEPNRKEFVKIPNSEVLDGDISSPAEVARAYMGSRESKVCPSKRS 240
Query: 241 LQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKP 300
L+AQGLGENS + T +S SKS +MLLAP S S+G KRRSSF D HI +V LRR +QKP
Sbjct: 241 LRAQGLGENSTNSTSLSFYSKSNNMLLAPPSISRGSKRRSSFLDNHIKSIVSLRRIRQKP 300
Query: 301 NIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARK 360
NIHLSKGLSLP+S VP GLSFDASQSSKFGRT+NFPS IWNSQLS K KTFARK
Sbjct: 301 NIHLSKGLSLPIS-----VPVVGLSFDASQSSKFGRTRNFPSCIWNSQLSPKPNKTFARK 360
Query: 361 FIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPK 420
FI N+ SDNI GA SSIYT +RSSKMASKILEQL+KLT PKEKVSTF+RLPVGEKYH K
Sbjct: 361 FITNVGSDNILGASCSSIYTLTRSSKMASKILEQLEKLTPPKEKVSTFNRLPVGEKYHSK 420
Query: 421 LSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLD 480
LSP V GHLKSVKDVDLPRNEEFV+DDKQSNSL GISYQ NREN+FQ+KE+LEKLK D
Sbjct: 421 LSPPEVVGHLKSVKDVDLPRNEEFVYDDKQSNSLLGISYQGNRENSFQHKERLEKLKSSD 480
Query: 481 PHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESS 540
PHP LLKDSGSIGS+ DS+ND G+P SAV KSTIQ PKDK+AFPM PD+DSVDQDESS
Sbjct: 481 PHPSRDLLKDSGSIGSTNDSMNDQGMPESAVGKSTIQPPKDKQAFPMLPDEDSVDQDESS 540
Query: 541 ADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSID 600
ADRVAP++AEVREGD+SLAVRQTTANE+++PA+ Q +SE+IVG SL+ SSD +T DSID
Sbjct: 541 ADRVAPATAEVREGDVSLAVRQTTANESVSPARLQKSSEVIVGSSLDGSSDSETFGDSID 600
Query: 601 DDIDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTA 660
DDID RLT Q ASSL +SQPE IDSFGNK LPENKQI SPVFSFVN+VSPRKQ ASSTA
Sbjct: 601 DDIDTRLTVQIASSLRTSQPEAIDSFGNKILPENKQIVSPVFSFVNDVSPRKQLIASSTA 660
Query: 661 FDVRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGL 720
D+ NKDDSLTE C ENGNEPSY YTQCNPASSN KLD SWRTCND FSSS S+SAGL
Sbjct: 661 LDIGNKDDSLTELCADFENGNEPSYPYTQCNPASSNDKLDFSWRTCNDAFSSSVSVSAGL 720
Query: 721 AFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTL 780
AFSFSSTP HQSLN GLSISCPSLYSSY P TGFM+QSSSRNIFLSA CA NN NI TTL
Sbjct: 721 AFSFSSTPGHQSLNNGLSISCPSLYSSYSPSTGFMNQSSSRNIFLSAPCAINNTNIITTL 780
Query: 781 ASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL---- 840
ASSFA +TSGTGSY DKIK+D +L NVNDTY SSITTPANSHYSMF+FGSA TPS
Sbjct: 781 ASSFASTTSGTGSY-DKIKRDESLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTNL 840
Query: 841 ---PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCS 900
PTVSSAT LSAQEVS GK+ IANAERTSMILGSSMSHVS+GMAGK S+ G++F CS
Sbjct: 841 LSKPTVSSATGLSAQEVSVGKKFIANAERTSMILGSSMSHVSSGMAGKASLCCGLSFECS 900
Query: 901 SPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTS 960
SPASE FNSGSRPSEFPIT TSAPATSTI TSNVSTS T LGFESFTGASFSS+ +TS
Sbjct: 901 SPASERFNSGSRPSEFPITAFTSAPATSTISTSNVSTSSTLLGFESFTGASFSSLRCSTS 960
Query: 961 AAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGP 1020
AAALA S+ PV SNSHPKVAF+V S NN+CEEQG SKDNVPLFSQKP SG S
Sbjct: 961 AAALADST--PVLSNSHPKVAFKVSSVNNNCEEQGTSKDNVPLFSQKPKFSSGSGPS--- 1020
Query: 1021 GGAGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTV 1041
G AGTSEL FQV KQQTLAEPQNSYPYIA+S+SL+AK+GGSFSLNAGG DK+NRRFV
Sbjct: 1021 GSAGTSELTSFQVGKQQTLAEPQNSYPYIAASNSLQAKSGGSFSLNAGGSDKANRRFVKF 1069
BLAST of HG10015595 vs. ExPASy TrEMBL
Match:
A0A1S3BFS9 (nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489364 PE=4 SV=1)
HSP 1 Score: 1390.6 bits (3598), Expect = 0.0e+00
Identity = 803/1084 (74.08%), Postives = 876/1084 (80.81%), Query Frame = 0
Query: 1 MASAKGQKSP------EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKL 60
M +A+ QK+P EEE LGTVGKFIDERF++KSPAKPYDRPP +RT+ NNSWILKL
Sbjct: 1 MVTARQQKNPEEKEEDEEERLGTVGKFIDERFVKKSPAKPYDRPPNGIRTTGNNSWILKL 60
Query: 61 VDPAQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHL 120
VDPAQRLISS S+M FSS+IRNFP HLTSRVSSQESSQSRKDDKKADVT F F++
Sbjct: 61 VDPAQRLISSGSRMLFSSVIRNFPTHLTSRVSSQESSQSRKDDKKADVTGPFEVQVAFNV 120
Query: 121 LVCIVSVSYIFLCSEM-----------SEIDHLTTLLQSRNVDLPVVNEEK--RCISSIP 180
S FL E+ SEIDHLTTLL SRN DLP VNEEK + ISSIP
Sbjct: 121 GDNRSRSSDQFLMMELEKTLKQKTFSRSEIDHLTTLLHSRNGDLPGVNEEKSFKFISSIP 180
Query: 181 ESNRKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRS 240
E NRKEFVKIPNSE VLD DIS PAE+AR YMGSR+ KVCPS+RS
Sbjct: 181 EPNRKEFVKIPNSEVRMGRPSISPPILCSSVLDGDISSPAEVARAYMGSRESKVCPSKRS 240
Query: 241 LQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKP 300
L+AQGLGENS + T +S SKS +MLLAP S S+G KRRSSF D HI +V LRR +QKP
Sbjct: 241 LRAQGLGENSTNSTSLSFYSKSNNMLLAPPSISRGSKRRSSFLDNHIKSIVSLRRIRQKP 300
Query: 301 NIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARK 360
NIHLSKGLSLP+S VP GLSFDASQSSKFGRT+NFPS IWNSQLS K KTFARK
Sbjct: 301 NIHLSKGLSLPIS-----VPVVGLSFDASQSSKFGRTRNFPSCIWNSQLSPKPNKTFARK 360
Query: 361 FIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPK 420
FI N+ SDNI GA SSIYT +RSSKMASKILEQL+KLT PKEKVSTF+RLPVGEKYH K
Sbjct: 361 FITNVGSDNILGASCSSIYTLTRSSKMASKILEQLEKLTPPKEKVSTFNRLPVGEKYHSK 420
Query: 421 LSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLD 480
LSP V GHLKSVKDVDLPRNEEFV+DDKQSNSL GISYQ NREN+FQ+KE+LEKLK D
Sbjct: 421 LSPPEVVGHLKSVKDVDLPRNEEFVYDDKQSNSLLGISYQGNRENSFQHKERLEKLKSSD 480
Query: 481 PHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESS 540
PHP LLKDSGSIGS+ DS+ND G+P SAV KSTIQ PKDK+AFPM PD+DSVDQDESS
Sbjct: 481 PHPSRDLLKDSGSIGSTNDSMNDQGMPESAVGKSTIQPPKDKQAFPMLPDEDSVDQDESS 540
Query: 541 ADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSID 600
ADRVAP++AEVREGD+SLAVRQTTANE+++PA+ Q +SE+IVG SL+ SSD +T DSID
Sbjct: 541 ADRVAPATAEVREGDVSLAVRQTTANESVSPARLQKSSEVIVGSSLDGSSDSETFGDSID 600
Query: 601 DDIDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTA 660
DDID RLT Q ASSL +SQPE IDSFGNK LPENKQI SPVFSFVNNVSPRKQ ASSTA
Sbjct: 601 DDIDTRLTVQIASSLRTSQPEAIDSFGNKILPENKQIVSPVFSFVNNVSPRKQLIASSTA 660
Query: 661 FDVRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGL 720
D+ NKDDSLTE C ENGNEPSY YTQCNPASSN KLD SWRTCND FSSS S+SAGL
Sbjct: 661 LDIGNKDDSLTELCADFENGNEPSYPYTQCNPASSNDKLDFSWRTCNDAFSSSVSVSAGL 720
Query: 721 AFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTL 780
AFSFSSTP HQSLN GLSISCPSLYSSY P TGFM+QSSSRNIFLSA CA NN NI TTL
Sbjct: 721 AFSFSSTPGHQSLNNGLSISCPSLYSSYSPSTGFMNQSSSRNIFLSAPCAINNTNIITTL 780
Query: 781 ASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL---- 840
ASSFA +TSGTGSY DKIK+D +L NVNDTY SSITTPANSHYSMF+FGSA TPS
Sbjct: 781 ASSFASTTSGTGSY-DKIKRDESLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTNL 840
Query: 841 ---PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCS 900
PTVSSAT LSAQEVS GK+ IANAERTSMILGSSMSHVS+GMAGK S+ G++F CS
Sbjct: 841 LSKPTVSSATGLSAQEVSVGKKFIANAERTSMILGSSMSHVSSGMAGKASLCCGLSFECS 900
Query: 901 SPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTS 960
SPASE FNSGSRPSEFPIT TSAPATSTI TSNVSTS T LGFESFTGASFSS+ +TS
Sbjct: 901 SPASERFNSGSRPSEFPITAFTSAPATSTISTSNVSTSSTLLGFESFTGASFSSLRCSTS 960
Query: 961 AAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGP 1020
AAALA S+ PV SNSHPKVAF+V S NN+CEEQG SKDNVPLFSQKP SG S
Sbjct: 961 AAALADST--PVLSNSHPKVAFKVSSVNNNCEEQGTSKDNVPLFSQKPKFSSGSGPS--- 1020
Query: 1021 GGAGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTV 1041
G AGTSEL FQV KQQTLAEPQNSYPYIA+S+SL+AK+GGSFSLNAGG DK+NRRFV
Sbjct: 1021 GSAGTSELTSFQVGKQQTLAEPQNSYPYIAASNSLQAKSGGSFSLNAGGSDKANRRFVKF 1073
BLAST of HG10015595 vs. ExPASy TrEMBL
Match:
A0A5A7SZK9 (Nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G006520 PE=4 SV=1)
HSP 1 Score: 1390.6 bits (3598), Expect = 0.0e+00
Identity = 803/1084 (74.08%), Postives = 876/1084 (80.81%), Query Frame = 0
Query: 1 MASAKGQKSP------EEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKL 60
M +A+ QK+P EEE LGTVGKFIDERF++KSPAKPYDRPP +RT+ NNSWILKL
Sbjct: 1 MVTARQQKNPEEKEEDEEERLGTVGKFIDERFVKKSPAKPYDRPPNGIRTTGNNSWILKL 60
Query: 61 VDPAQRLISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHL 120
VDPAQRLISS S+M FSS+IRNFP HLTSRVSSQESSQSRKDDKKADVT F F++
Sbjct: 61 VDPAQRLISSGSRMLFSSVIRNFPTHLTSRVSSQESSQSRKDDKKADVTGPFEVQVAFNV 120
Query: 121 LVCIVSVSYIFLCSEM-----------SEIDHLTTLLQSRNVDLPVVNEEK--RCISSIP 180
S FL E+ SEIDHLTTLL SRN DLP VNEEK + ISSIP
Sbjct: 121 GDNRSRSSDQFLMMELEKTLKQKTFSRSEIDHLTTLLHSRNGDLPGVNEEKSFKFISSIP 180
Query: 181 ESNRKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRS 240
E NRKEFVKIPNSE VLD DIS PAE+AR YMGSR+ KVCPS+RS
Sbjct: 181 EPNRKEFVKIPNSEVRMGRPSISPPILCSSVLDGDISSPAEVARAYMGSRESKVCPSKRS 240
Query: 241 LQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKP 300
L+AQGLGENS + T +S SKS +MLLAP S S+G KRRSSF D HI +V LRR +QKP
Sbjct: 241 LRAQGLGENSTNSTSLSFYSKSNNMLLAPPSISRGSKRRSSFLDNHIKSIVSLRRIRQKP 300
Query: 301 NIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARK 360
NIHLSKGLSLP+S VP GLSFDASQSSKFGRT+NFPS IWNSQLS K KTFARK
Sbjct: 301 NIHLSKGLSLPIS-----VPVVGLSFDASQSSKFGRTRNFPSCIWNSQLSPKPNKTFARK 360
Query: 361 FIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPK 420
FI N+ SDNI GA SSIYT +RSSKMASKILEQL+KLT PKEKVSTF+RLPVGEKYH K
Sbjct: 361 FITNVGSDNILGASCSSIYTLTRSSKMASKILEQLEKLTPPKEKVSTFNRLPVGEKYHSK 420
Query: 421 LSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLD 480
LSP V GHLKSVKDVDLPRNEEFV+DDKQSNSL GISYQ NREN+FQ+KE+LEKLK D
Sbjct: 421 LSPPEVVGHLKSVKDVDLPRNEEFVYDDKQSNSLLGISYQGNRENSFQHKERLEKLKSSD 480
Query: 481 PHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESS 540
PHP LLKDSGSIGS+ DS+ND G+P SAV KSTIQ PKDK+AFPM PD+DSVDQDESS
Sbjct: 481 PHPSRDLLKDSGSIGSTNDSMNDQGMPESAVGKSTIQPPKDKQAFPMLPDEDSVDQDESS 540
Query: 541 ADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVG-SLNRSSDLKTSEDSID 600
ADRVAP++AEVREGD+SLAVRQTTANE+++PA+ Q +SE+IVG SL+ SSD +T DSID
Sbjct: 541 ADRVAPATAEVREGDVSLAVRQTTANESVSPARLQKSSEVIVGSSLDGSSDSETFGDSID 600
Query: 601 DDIDARLTFQNASSLCSSQPETIDSFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTA 660
DDID RLT Q ASSL +SQPE IDSFGNK LPENKQI SPVFSFVNNVSPRKQ ASSTA
Sbjct: 601 DDIDTRLTVQIASSLRTSQPEAIDSFGNKILPENKQIVSPVFSFVNNVSPRKQLIASSTA 660
Query: 661 FDVRNKDDSLTESCVASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGL 720
D+ NKDDSLTE C ENGNEPSY YTQCNPASSN KLD SWRTCND FSSS S+SAGL
Sbjct: 661 LDIGNKDDSLTELCADFENGNEPSYPYTQCNPASSNDKLDFSWRTCNDAFSSSVSVSAGL 720
Query: 721 AFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCASNNANITTTL 780
AFSFSSTP HQSLN GLSISCPSLYSSY P TGFM+QSSSRNIFLSA CA NN NI TTL
Sbjct: 721 AFSFSSTPGHQSLNNGLSISCPSLYSSYSPSTGFMNQSSSRNIFLSAPCAINNTNIITTL 780
Query: 781 ASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHYSMFNFGSAPTPSL---- 840
ASSFA +TSGTGSY DKIK+D +L NVNDTY SSITTPANSHYSMF+FGSA TPS
Sbjct: 781 ASSFASTTSGTGSY-DKIKRDESLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTNL 840
Query: 841 ---PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVSTGMAGKVSVFSGITFGCS 900
PTVSSAT LSAQEVS GK+ IANAERTSMILGSSMSHVS+GMAGK S+ G++F CS
Sbjct: 841 LSKPTVSSATGLSAQEVSVGKKFIANAERTSMILGSSMSHVSSGMAGKASLCCGLSFECS 900
Query: 901 SPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCLGFESFTGASFSSICSTTS 960
SPASE FNSGSRPSEFPIT TSAPATSTI TSNVSTS T LGFESFTGASFSS+ +TS
Sbjct: 901 SPASERFNSGSRPSEFPITAFTSAPATSTISTSNVSTSSTLLGFESFTGASFSSLRCSTS 960
Query: 961 AAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVPLFSQKPIPPPSSGFSFGP 1020
AAALA S+ PV SNSHPKVAF+V S NN+CEEQG SKDNVPLFSQKP SG S
Sbjct: 961 AAALADST--PVLSNSHPKVAFKVSSVNNNCEEQGTSKDNVPLFSQKPKFSSGSGPS--- 1020
Query: 1021 GGAGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGSFSLNAGGRDKSNRRFVTV 1041
G AGTSEL FQV KQQTLAEPQNSYPYIA+S+SL+AK+GGSFSLNAGG DK+NRRFV
Sbjct: 1021 GSAGTSELTSFQVGKQQTLAEPQNSYPYIAASNSLQAKSGGSFSLNAGGSDKANRRFVKF 1073
BLAST of HG10015595 vs. ExPASy TrEMBL
Match:
A0A6J1GZB0 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458242 PE=4 SV=1)
HSP 1 Score: 1314.7 bits (3401), Expect = 0.0e+00
Identity = 771/1102 (69.96%), Postives = 836/1102 (75.86%), Query Frame = 0
Query: 1 MASAKGQKSPEEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKLVDPAQR 60
MA+A+ +KS EEEGL T GKF D+RF RK P KPYDRPPT LRTS NNSWILKLVDPAQR
Sbjct: 1 MATARERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVDPAQR 60
Query: 61 LISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFW-----CFHLL 120
LISS SQM FSS+ RNFPH L SR SS ESSQSR+DDKKADVT +N +
Sbjct: 61 LISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVTVAAANVGDNQNRADRFV 120
Query: 121 VCIVSVSYIFLCSEMSEIDHLTTLLQSRNVDLPVVNEEKRC--ISSIPESNRKEFVKIPN 180
+ + + SEIDHLT L+ S+NVDLP VNEEKR ISSIPESNR EF KIPN
Sbjct: 121 MVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPESNRNEFKKIPN 180
Query: 181 SE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRSLQAQGLGENSAD 240
SE VLDEDIS PAEIAR YMGSRQPK+CPS SL+AQGLGENSA
Sbjct: 181 SEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPSLRAQGLGENSAR 240
Query: 241 PTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKPNIHLSKGLSLPV 300
PT S SSKS MLL PSST+QGLKRRSSFFD HIGP VPLRR QKPNIHLSKG SLPV
Sbjct: 241 PTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIGPNVPLRRIGQKPNIHLSKGSSLPV 300
Query: 301 SAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARKFIKNMESDNIPG 360
S PI VP D LSFDASQSSKFG+ NFPSSIWNSQLSLK KK RKFI N+ESDNI G
Sbjct: 301 STRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSTRKFIMNVESDNIRG 360
Query: 361 AGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPKLSPLTVGGHLKS 420
AGSSSIYTPSRS KMASKILEQLDKLT PKEKV RLPVGE PKLSP TV GHLK
Sbjct: 361 AGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPKLSPFTVDGHLKI 420
Query: 421 VKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLDPHPRCALLKDSG 480
VKDVDLPR+EE VHD+KQS SL+G+ Y N+ENT QNKEKLE +KP DPH RCALLKDSG
Sbjct: 421 VKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPHHRCALLKDSG 480
Query: 481 SIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESSADRVAPSSAEVR 540
SIGSSKDS+ DLGVPA AVVKS IQ PK+K AF M PDKD VDQDESS DRVAP++AE R
Sbjct: 481 SIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDQDESSPDRVAPATAEDR 540
Query: 541 EGDISLAVRQTTANEALAPAKPQTTSELIVGS-LNRSSDLKTSEDSIDDDIDARLTFQNA 600
EGDISLAVRQTTANE LAP+KPQT SE+IVGS LNRSSDLKTSE S+ DD+D TFQ
Sbjct: 541 EGDISLAVRQTTANETLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDDMDTSFTFQ-- 600
Query: 601 SSLCSSQPETID-----SFGNKDLPENKQIDSPVFSFVNNVSPRKQPNASSTAFDVRNKD 660
+ SQPETID SFGN DLPE K+IDSPVFSF NNVSPRKQPNASSTAFDV NKD
Sbjct: 601 --IAPSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPNASSTAFDVGNKD 660
Query: 661 DSLTESCVASENGNEPSYAYTQCNP----------------ASSNHKLDCSWRTCNDPFS 720
S TE C A ENGN + YTQ NP ASSNHKLDCSW TCND FS
Sbjct: 661 ASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKLDCSWGTCNDAFS 720
Query: 721 SSASISAGLAFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSSSRNIFLSATCAS 780
SSASISAGLA SF ST +QSLN GLSISCPS YSS T M QSSSR IFLSA CAS
Sbjct: 721 SSASISAGLAVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSSSRYIFLSAKCAS 780
Query: 781 NNANI--------TTTLASSFAPSTSGTGSYEDKIKQDTTLHNVNDTYLSSITTPANSHY 840
N+ANI TT + +S APS G G++EDKIKQD +LH N+TY SSI+TPANSHY
Sbjct: 781 NDANITTNGKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYFSSISTPANSHY 840
Query: 841 SMFNFGSAPTPSL--------PTVSSATELSAQEVSAGKELIANAERTSMILGSSMSHVS 900
+MF+F TPS PTVSSA ELSAQ SAGKE ANAE+TS+++GS MSH S
Sbjct: 841 NMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQTSILMGSFMSHAS 900
Query: 901 TGMAGKVSVFSGITFGCSSPASELFNSGSRPSEFPITGLTSAPATSTIFTSNVSTSVTCL 960
+ MAGK S+ SGI+FGCSSPASELF+SGSRPSEFPITG T APATST F ST T L
Sbjct: 901 SAMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATSTHF----STPRTHL 960
Query: 961 GFESFTGASFSSICSTTSAAALASSSSKPVFSNSHPKVAFRVPSGNNDCEEQGISKDNVP 1020
GFESFTGASFSSICSTTSAAA+A SSSK V SNSHP VAFRV +GNNDCE+QG SKDNVP
Sbjct: 961 GFESFTGASFSSICSTTSAAAIACSSSKTVSSNSHPTVAFRVSTGNNDCEDQGTSKDNVP 1020
Query: 1021 LFSQKPIPPPSSGFSFGPGGAGTSELNPFQV-KQQTLAEPQNSYPYIASSSSLEAKAGGS 1041
+FSQKP+PPPSSGFSF G TSE NPF V KQQTLA+PQNS PYIA SSSLEA+ GS
Sbjct: 1021 IFSQKPVPPPSSGFSF---GQATSESNPFLVQKQQTLAKPQNSSPYIAHSSSLEAR--GS 1080
BLAST of HG10015595 vs. ExPASy TrEMBL
Match:
A0A6J1GWT8 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458242 PE=4 SV=1)
HSP 1 Score: 1312.4 bits (3395), Expect = 0.0e+00
Identity = 775/1114 (69.57%), Postives = 840/1114 (75.40%), Query Frame = 0
Query: 1 MASAKGQKSPEEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTSRNNSWILKLVDPAQR 60
MA+A+ +KS EEEGL T GKF D+RF RK P KPYDRPPT LRTS NNSWILKLVDPAQR
Sbjct: 1 MATARERKSREEEGLRTAGKFADKRFFRKPPKKPYDRPPTTLRTSGNNSWILKLVDPAQR 60
Query: 61 LISSSSQMFFSSLIRNFPHHLTSRVSSQESSQSRKDDKKADVTYGFSNFWCFHLLVCIVS 120
LISS SQM FSS+ RNFPH L SR SS ESSQSR+DDKKADVT F + V +
Sbjct: 61 LISSGSQMLFSSVFRNFPHRLPSRTSSPESSQSRRDDKKADVTDP------FEVQVAAAN 120
Query: 121 V------SYIFLCSEM-----------SEIDHLTTLLQSRNVDLPVVNEEKRC--ISSIP 180
V + F+ E+ SEIDHLT L+ S+NVDLP VNEEKR ISSIP
Sbjct: 121 VGDNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIP 180
Query: 181 ESNRKEFVKIPNSE----------------VLDEDISKPAEIAREYMGSRQPKVCPSRRS 240
ESNR EF KIPNSE VLDEDIS PAEIAR YMGSRQPK+CPS S
Sbjct: 181 ESNRNEFKKIPNSEVRMCRQSFPTPILSSSVLDEDISSPAEIARAYMGSRQPKICPSMPS 240
Query: 241 LQAQGLGENSADPTRISLSSKSISMLLAPSSTSQGLKRRSSFFDEHIGPVVPLRRTQQKP 300
L+AQGLGENSA PT S SSKS MLL PSST+QGLKRRSSFFD HIGP VPLRR QKP
Sbjct: 241 LRAQGLGENSARPTSTSFSSKSTDMLLVPSSTNQGLKRRSSFFDNHIGPNVPLRRIGQKP 300
Query: 301 NIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLSLKHKKTFARK 360
NIHLSKG SLPVS PI VP D LSFDASQSSKFG+ NFPSSIWNSQLSLK KK RK
Sbjct: 301 NIHLSKGSSLPVSTRPISVPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSTRK 360
Query: 361 FIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSRLPVGEKYHPK 420
FI N+ESDNI GAGSSSIYTPSRS KMASKILEQLDKLT PKEKV RLPVGE PK
Sbjct: 361 FIMNVESDNIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPPK 420
Query: 421 LSPLTVGGHLKSVKDVDLPRNEEFVHDDKQSNSLYGISYQHNRENTFQNKEKLEKLKPLD 480
LSP TV GHLK VKDVDLPR+EE VHD+KQS SL+G+ Y N+ENT QNKEKLE +KP D
Sbjct: 421 LSPFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSD 480
Query: 481 PHPRCALLKDSGSIGSSKDSINDLGVPASAVVKSTIQLPKDKRAFPMSPDKDSVDQDESS 540
PH RCALLKDSGSIGSSKDS+ DLGVPA AVVKS IQ PK+K AF M PDKD VDQDESS
Sbjct: 481 PHHRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSIIQPPKNKLAFQMWPDKDRVDQDESS 540
Query: 541 ADRVAPSSAEVREGDISLAVRQTTANEALAPAKPQTTSELIVGS-LNRSSDLKTSEDSID 600
DRVAP++AE REGDISLAVRQTTANE LAP+KPQT SE+IVGS LNRSSDLKTSE S+
Sbjct: 541 PDRVAPATAEDREGDISLAVRQTTANETLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVH 600
Query: 601 DDIDARLTFQNASSLCSSQPETID-----SFGNKDLPENKQIDSPVFSFVNNVSPRKQPN 660
DD+D TFQ + SQPETID SFGN DLPE K+IDSPVFSF NNVSPRKQPN
Sbjct: 601 DDMDTSFTFQ----IAPSQPETIDSAPTNSFGNNDLPEKKRIDSPVFSFGNNVSPRKQPN 660
Query: 661 ASSTAFDVRNKDDSLTESCVASENGNEPSYAYTQCNP----------------ASSNHKL 720
ASSTAFDV NKD S TE C A ENGN + YTQ NP ASSNHKL
Sbjct: 661 ASSTAFDVGNKDASRTELCAAPENGNGAPFPYTQWNPASSYSDVQGSVYLNAVASSNHKL 720
Query: 721 DCSWRTCNDPFSSSASISAGLAFSFSSTPSHQSLNCGLSISCPSLYSSYCPPTGFMSQSS 780
DCSW TCND FSSSASISAGLA SF ST +QSLN GLSISCPS YSS T M QSS
Sbjct: 721 DCSWGTCNDAFSSSASISAGLAVSFCSTARYQSLNNGLSISCPSQYSSCSLLTPSMGQSS 780
Query: 781 SRNIFLSATCASNNANI--------TTTLASSFAPSTSGTGSYEDKIKQDTTLHNVNDTY 840
SR IFLSA CASN+ANI TT + +S APS G G++EDKIKQD +LH N+TY
Sbjct: 781 SRYIFLSAKCASNDANITTNGKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTY 840
Query: 841 LSSITTPANSHYSMFNFGSAPTPSL--------PTVSSATELSAQEVSAGKELIANAERT 900
SSI+TPANSHY+MF+F TPS PTVSSA ELSAQ SAGKE ANAE+T
Sbjct: 841 FSSISTPANSHYNMFSFNPGATPSFVNNHQLSTPTVSSAPELSAQGASAGKEFTANAEQT 900
Query: 901 SMILGSSMSHVSTGMAGKVSVFSGITFGCSSPASELFNSGSRPSEFPITGLTSAPATSTI 960
S+++GS MSH S+ MAGK S+ SGI+FGCSSPASELF+SGSRPSEFPITG T APATST
Sbjct: 901 SILMGSFMSHASSAMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAPATSTH 960
Query: 961 FTSNVSTSVTCLGFESFTGASFSSICSTTSAAALASSSSKPVFSNSHPKVAFRVPSGNND 1020
F ST T LGFESFTGASFSSICSTTSAAA+A SSSK V SNSHP VAFRV +GNND
Sbjct: 961 F----STPRTHLGFESFTGASFSSICSTTSAAAIACSSSKTVSSNSHPTVAFRVSTGNND 1020
Query: 1021 CEEQGISKDNVPLFSQKPIPPPSSGFSFGPGGAGTSELNPFQV-KQQTLAEPQNSYPYIA 1041
CE+QG SKDNVP+FSQKP+PPPSSGFSF G TSE NPF V KQQTLA+PQNS PYIA
Sbjct: 1021 CEDQGTSKDNVPIFSQKPVPPPSSGFSF---GQATSESNPFLVQKQQTLAKPQNSSPYIA 1080
BLAST of HG10015595 vs. TAIR 10
Match:
AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )
HSP 1 Score: 136.3 bits (342), Expect = 1.4e-31
Identity = 342/1363 (25.09%), Postives = 510/1363 (37.42%), Query Frame = 0
Query: 2 ASAKGQKS-PEEEGLGTVGKFIDERFLRKSPAKPYDRPPTALRTS-------RNNSWILK 61
++A+G+ S P GLGT GKF + R+S PYDRP T++R + R W+ K
Sbjct: 3 SAARGESSNPYGGGLGTGGKF-RKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSK 62
Query: 62 LVDPAQRLISSSSQMFFSSLIR-------------NFPHHLTSRVSSQESSQSRKDD-KK 121
LVDPAQRLI+ S+Q F SL R L R +QE+ K+D
Sbjct: 63 LVDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVSN 122
Query: 122 ADVTYGFSNFWCFHLLVCIVSVSYIFL-------CSEMSEIDHLTTLLQSRNVDLPVVNE 181
+ G + V + L SE+D LTTLL+S+ D +NE
Sbjct: 123 LSMKNGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNE 182
Query: 182 EKR----CISSIPESNRKEFVKIPNSEV-------------LDEDISKPAEIAREYMGSR 241
E+R + P S+ ++ N + LDE I+ PA++A+ YMGSR
Sbjct: 183 EQRNEVGMVVRHPPSHERDRTHPDNGSMNTLVSTPPGSLRTLDECIASPAQLAKAYMGSR 242
Query: 242 QPKVCPSRRSLQAQGLGENSADPTRISLSSKSISMLLA---------------------- 301
+V PS L+ Q E+S R KS +M L
Sbjct: 243 PSEVTPSMLGLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQRPLENGFVTPRSRGRS 302
Query: 302 ----------------------------------PSSTSQ----GLKRRSSFFDEHIGPV 361
PS + Q GLKRRSS D IG V
Sbjct: 303 AVYSMARTPYSRPQSSVKIGSLFQASPSKWEESLPSGSRQGFQSGLKRRSSVLDNDIGSV 362
Query: 362 VPLRRTQQKPNIHLSKGLSLPVSAGPIFVPEDGLSFDASQSSKFGRTQNFPSSIWNSQLS 421
P+RR +QK N+ S+ L+LPVS P+ V +G
Sbjct: 363 GPVRRIRQKSNLS-SRSLALPVSESPLSVRANG--------------------------- 422
Query: 422 LKHKKTFARKFIKNMESDNIPGAGSSSIYTPSRSSKMASKILEQLDKLTSPKEKVSTFSR 481
K T K +++IP GSS P++SS+MASKIL+QLDKL S +EK +
Sbjct: 423 -GEKTTHTSK----DSAEDIP--GSSFNLVPTKSSEMASKILQQLDKLVSTREKSPS--- 482
Query: 482 LPVGEKYHPKLSP-LTVGGHLKSVKDVDLPRNEEFVHD--DKQSNSLYGISYQHNRENTF 541
KLSP + G LKS+++V+ P+ F+ + +K++NS SYQ
Sbjct: 483 ---------KLSPSMLRGPALKSLQNVEAPK---FLGNLPEKKANS-PDSSYQKQE---- 542
Query: 542 QNKEKLEKLKPLDPHPRCALLKDSGSIGSSKD-SINDLGVPASAVVKSTIQLPKDKRAFP 601
++E + + + + GSSKD + GV + S + P KR+F
Sbjct: 543 ISRESVSREVLAQSEKTGDAVDGTSKTGSSKDQDMRGKGV-YMPLTNSLEEHPPKKRSFR 602
Query: 602 MSPDKDSVDQDESSADRVAP-------SSAEVREGDISLAV--RQTTANEALAPAKPQTT 661
MS +D ++ D+ P ++ EV + IS+ + + T +EA+ +
Sbjct: 603 MSAHEDFLELDDDLGAASTPCEVAEKQNAFEVEKSHISMPIGEKPLTPSEAMPSTSYISN 662
Query: 662 SELIVGSLNRSSDLKTSE------------DSIDDDIDARLTFQNASSLCSSQPETIDSF 721
+ G+ N S + + ++ + + + SS+ S +P + +
Sbjct: 663 GDASQGTSNGSLETERNKFVAFPIEAVQQSNMASEPTSKFIQGTEKSSISSGKPTSEEKR 722
Query: 722 GNKDLPE-------NKQIDSPVFSFVNNVSPR----KQPNASSTAFDVRNKDDSLTESCV 781
+ P+ N P +N S K SSTAF V TES
Sbjct: 723 IPLEEPKKPAAVFPNISFSPPATGLLNQNSGASADIKLEKTSSTAFGVSEAWAKPTESKK 782
Query: 782 ASENGNEPSYAYTQCNPASSNHKLDCSWRTCNDPFSSSASISAGLAF--SFSSTPSHQSL 841
N + + T P + N + + P S+ S+++ +F S S+ PS S+
Sbjct: 783 TFSNSASGAESSTSAAP-TLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISNIPSDNSV 842
Query: 842 N-----------------------------------CGLSISCPSLYSSYCPP------- 901
LS + P + P
Sbjct: 843 GDMPSTVQSFAATHNSSSIFGKLPTSNDSNSQSTSASPLSSTSPFKFGQPAAPFSAPAVS 902
Query: 902 -------------------------TGFMSQSSSRNIFLSATCASN-------------- 961
G S S I A A N
Sbjct: 903 ESSGQISKETEVKNATFGNTSTFKFGGMASADQSTGIVFGAKSAENKSRPGFVFGSSSVV 962
Query: 962 -NANITTTLASSFAPSTSGT-----------GSYEDKIKQDTTLHNV-NDTYLSSITTPA 1021
+ + + A++ AP +SG+ G+ KI + N N + +S
Sbjct: 963 GGSTLNPSTAAASAPESSGSLIFGVTSSSTPGTETSKISASSAATNTGNSVFGTSSFAFT 1022
Query: 1022 NSHYSMFNFGSAPTPS----LPTVSSATELS-------------AQEVSAGKELIANAER 1039
+S SM SA T S VSSA+ S AQ + G + +
Sbjct: 1023 SSGSSMVGGVSASTGSSVFGFNAVSSASATSSQSQASNLFGAGNAQTGNTGSGTTTSTQS 1082
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893389.1 | 0.0e+00 | 79.94 | nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida] | [more] |
XP_038893390.1 | 0.0e+00 | 75.79 | nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida] | [more] |
TYK09186.1 | 0.0e+00 | 74.17 | nuclear pore complex protein NUP1 isoform X1 [Cucumis melo var. makuwa] | [more] |
XP_008446727.1 | 0.0e+00 | 74.08 | PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Cucumis melo] >XP_00844... | [more] |
XP_011656263.1 | 0.0e+00 | 72.88 | nuclear pore complex protein NUP1 [Cucumis sativus] >XP_031741373.1 nuclear pore... | [more] |
Match Name | E-value | Identity | Description | |
Q9CAF4 | 1.9e-30 | 25.09 | Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CFP1 | 0.0e+00 | 74.17 | Nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A1S3BFS9 | 0.0e+00 | 74.08 | nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348... | [more] |
A0A5A7SZK9 | 0.0e+00 | 74.08 | Nuclear pore complex protein NUP1 isoform X1 OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1GZB0 | 0.0e+00 | 69.96 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1GWT8 | 0.0e+00 | 69.57 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita moschata OX=3662 ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G10650.1 | 1.4e-31 | 25.09 | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.... | [more] |