Homology
BLAST of HG10015580 vs. NCBI nr
Match:
XP_038893424.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 705.7 bits (1820), Expect = 2.6e-199
Identity = 389/613 (63.46%), Postives = 415/613 (67.70%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCNNSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELSGD- 60
MHNFKLL N LLVSSKNIDCN+SSLAA+LHKLLLPSLS + SC RR FY YASG+LSGD
Sbjct: 1 MHNFKLLRNFLLVSSKNIDCNSSSLAATLHKLLLPSLSFAASCDRRGFYHYASGQLSGDE 60
Query: 61 ---DNENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVGSSP 120
DNEN+KFPL+N+GLDIHK+GK LVLPVQ AV GDKCEERFVIGD+N SKFTNVGSSP
Sbjct: 61 NVCDNENDKFPLRNQGLDIHKQGKRLVLPVQGAVLGDKCEERFVIGDENKSKFTNVGSSP 120
Query: 121 ESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATEAPV 180
ESSR+ L T+G SY TYNTK LETNELRP V+FNDVQFVD KQNKQLAERDAA EAP+
Sbjct: 121 ESSRNILLMTAGHSYPTYNTKQLETNELRPLVEFNDVQFVDKLKQNKQLAERDAAAEAPI 180
Query: 181 WLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTK 240
WLTYTSDNN DQARIVA LL NCTNLLELYQIHAHVLRTN+LEN+PSSF+WNTIIRSYTK
Sbjct: 181 WLTYTSDNNVDQARIVAILLTNCTNLLELYQIHAHVLRTNILENNPSSFFWNTIIRSYTK 240
Query: 241 LEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYS 300
LEAPRKALSVYIAMLR+G+LPD YTLPIVFKA+S AYAFGLG+QLHS+AIRLGLEF QYS
Sbjct: 241 LEAPRKALSVYIAMLRAGVLPDFYTLPIVFKALSLAYAFGLGIQLHSIAIRLGLEFHQYS 300
Query: 301 ESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGL 360
ESGLISLYSKVGDL+CARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLR+SGL
Sbjct: 301 ESGLISLYSKVGDLECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRQSGL 360
Query: 361 EPDDVTIVSVTSACGSL------------------------------------------- 420
EPDDVTIVSVTSACGSL
Sbjct: 361 EPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVAGKSDILMLNSLIDMYGKCGRMDLA 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 MKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNHVTFVGVLSACVHG 480
BLAST of HG10015580 vs. NCBI nr
Match:
KAE8648806.1 (hypothetical protein Csa_008294 [Cucumis sativus])
HSP 1 Score: 646.7 bits (1667), Expect = 1.4e-181
Identity = 362/613 (59.05%), Postives = 392/613 (63.95%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCNNSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELSGDD 60
MHNFKL P+ LL+S KN+DCN+S SLHKLLLPSLSS+ S ARR FY YA LSG++
Sbjct: 68 MHNFKLFPHFLLLSPKNVDCNSS----SLHKLLLPSLSSAASRARRGFYHYAPEPLSGNE 127
Query: 61 ----NENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVGSSP 120
N NNKF LQN G DIHKEGKCLVLPVQD VS KCEERF I D+ SKFTNVGSSP
Sbjct: 128 YVCYNGNNKFELQNGGPDIHKEGKCLVLPVQDVVSDYKCEERFGICDEKKSKFTNVGSSP 187
Query: 121 ESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATEAPV 180
ESSRHTFLTT+G Y Y TK+LETNELR V+FND+QFVD+PKQNKQ AER+A TE P
Sbjct: 188 ESSRHTFLTTAGHCYPNYKTKHLETNELRRLVEFNDLQFVDEPKQNKQPAERNAVTETPF 247
Query: 181 WLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTK 240
WLTYTS NN D ARIVATLLMNCTN+LELYQIHAHVLRTNMLENHPSSFYWN IIRSYT+
Sbjct: 248 WLTYTSYNNMDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTR 307
Query: 241 LEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYS 300
LE PR AL VYI MLR+GILPDCYTLPIVFKA+S AYAF LGLQLHSVAIRLG EFDQYS
Sbjct: 308 LEVPRIALFVYIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYS 367
Query: 301 ESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGL 360
ESGLISLYSK+GDL+CA KVFEQNH+RKLGSWNAIIAGLSQGGRAKEAV+MFIKLR+SGL
Sbjct: 368 ESGLISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGL 427
Query: 361 EPDDVTIVSVTSACGSL------------------------------------------- 420
EPDD TIVSVTSACGSL
Sbjct: 428 EPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDMYGKCGRMDLA 487
Query: 421 ------------------------------------------------------------ 444
Sbjct: 488 MKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHG 547
BLAST of HG10015580 vs. NCBI nr
Match:
XP_004135378.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial [Cucumis sativus])
HSP 1 Score: 646.7 bits (1667), Expect = 1.4e-181
Identity = 362/613 (59.05%), Postives = 392/613 (63.95%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCNNSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELSGDD 60
MHNFKL P+ LL+S KN+DCN+S SLHKLLLPSLSS+ S ARR FY YA LSG++
Sbjct: 1 MHNFKLFPHFLLLSPKNVDCNSS----SLHKLLLPSLSSAASRARRGFYHYAPEPLSGNE 60
Query: 61 ----NENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVGSSP 120
N NNKF LQN G DIHKEGKCLVLPVQD VS KCEERF I D+ SKFTNVGSSP
Sbjct: 61 YVCYNGNNKFELQNGGPDIHKEGKCLVLPVQDVVSDYKCEERFGICDEKKSKFTNVGSSP 120
Query: 121 ESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATEAPV 180
ESSRHTFLTT+G Y Y TK+LETNELR V+FND+QFVD+PKQNKQ AER+A TE P
Sbjct: 121 ESSRHTFLTTAGHCYPNYKTKHLETNELRRLVEFNDLQFVDEPKQNKQPAERNAVTETPF 180
Query: 181 WLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTK 240
WLTYTS NN D ARIVATLLMNCTN+LELYQIHAHVLRTNMLENHPSSFYWN IIRSYT+
Sbjct: 181 WLTYTSYNNMDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTR 240
Query: 241 LEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYS 300
LE PR AL VYI MLR+GILPDCYTLPIVFKA+S AYAF LGLQLHSVAIRLG EFDQYS
Sbjct: 241 LEVPRIALFVYIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYS 300
Query: 301 ESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGL 360
ESGLISLYSK+GDL+CA KVFEQNH+RKLGSWNAIIAGLSQGGRAKEAV+MFIKLR+SGL
Sbjct: 301 ESGLISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGL 360
Query: 361 EPDDVTIVSVTSACGSL------------------------------------------- 420
EPDD TIVSVTSACGSL
Sbjct: 361 EPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDMYGKCGRMDLA 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 MKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHG 480
BLAST of HG10015580 vs. NCBI nr
Match:
XP_022968170.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X2 [Cucurbita maxima])
HSP 1 Score: 614.0 bits (1582), Expect = 1.0e-171
Identity = 348/590 (58.98%), Postives = 380/590 (64.41%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCN---NSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELS 60
MHNFK L N LLVSSKNID N NS A + L LPS S + SCARR F +YA+G+
Sbjct: 1 MHNFKPLRNFLLVSSKNIDYNLLCNSGFTAGPYILPLPSPSCTDSCARRGFCRYAAGKFF 60
Query: 61 GD----DNENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVG 120
G+ D ENNK LQN+GLDIH+E K VLPVQD VSGDKCE RF GD+N SKFTN G
Sbjct: 61 GNEYECDIENNK--LQNQGLDIHQEAKRHVLPVQDVVSGDKCEGRFAYGDNNKSKFTNAG 120
Query: 121 SSPESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATE 180
SS +SS T L G S YNTK+L T++ RP V+FNDV+F+D K NKQLAERDA +
Sbjct: 121 SSSDSSLQTLLMRGGHSPPIYNTKHLATDDFRPLVEFNDVRFIDKLKINKQLAERDARID 180
Query: 181 APVWLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRS 240
P+W TYTSDNN DQ IVATL+MNCT+LLEL QIHAH+LRTNMLEN+PSSF WN IIRS
Sbjct: 181 TPIWSTYTSDNNVDQVSIVATLVMNCTHLLELSQIHAHILRTNMLENYPSSFSWNNIIRS 240
Query: 241 YTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFD 300
YT+LEAPRKALSVYIAMLR+G+ PD YTLPIVFKA+S YAFGLGLQLHSVAIRLGLEFD
Sbjct: 241 YTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFGLGLQLHSVAIRLGLEFD 300
Query: 301 QYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
QYSESGLISLYSK+GDL+CARKVFE+NHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR
Sbjct: 301 QYSESGLISLYSKLGDLECARKVFEKNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
Query: 361 SGLEPDDVTIVSVTSACGSLG--------------------------------------- 420
SGLEPDDVTIVSVTSACGSLG
Sbjct: 361 SGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVIGKSDILMLNSLIDMYGKCGYA 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 MHGQVKQALENFRCMREAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQL 480
BLAST of HG10015580 vs. NCBI nr
Match:
XP_023541141.1 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 610.9 bits (1574), Expect = 8.6e-171
Identity = 348/590 (58.98%), Postives = 381/590 (64.58%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCN---NSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELS 60
MHNFK L N LLVSSKNID N NS A + L LPSLS + SCARR F +YA+G+
Sbjct: 1 MHNFKPLRNFLLVSSKNIDYNLLCNSGFTAGPYILPLPSLSCTDSCARRGFCRYAAGKFF 60
Query: 61 GDDN----ENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVG 120
G++ ENNK +Q GLDIH+E K VLPVQD VSGDKCE +FV GD+N SKFTNVG
Sbjct: 61 GNEYECGIENNKLEIQ--GLDIHQEAKRHVLPVQDVVSGDKCEGQFVYGDNNKSKFTNVG 120
Query: 121 SSPESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATE 180
SSP+SS T L G S YN+K+L T++ RP V+FNDV+F+D K NKQLAERDA +
Sbjct: 121 SSPDSSLQTLLMRGGHSPPIYNSKHLATDDFRPLVEFNDVRFIDKLKINKQLAERDARID 180
Query: 181 APVWLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRS 240
AP+ TYTSDNN DQ IVATLLMNCT+LLEL QIHAH+LRTNMLEN+PSSF WN IIRS
Sbjct: 181 APIQSTYTSDNNVDQVSIVATLLMNCTHLLELSQIHAHILRTNMLENYPSSFSWNNIIRS 240
Query: 241 YTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFD 300
YT+ EAPRKALSVYIAMLR+G+ PD YTLPIVFKA+S YAFGLGLQLHSVAIRLGLEFD
Sbjct: 241 YTRQEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFGLGLQLHSVAIRLGLEFD 300
Query: 301 QYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
QYSESGLISLYSK+GDL+CA KVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR
Sbjct: 301 QYSESGLISLYSKLGDLECACKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
Query: 361 SGLEPDDVTIVSVTSACGSLG--------------------------------------- 420
SGLEPDDVTIVSVTSACGSLG
Sbjct: 361 SGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKATGKSDILMLNSLIDMYGKCGYA 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 MHGQVKQALENFRCMREAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQL 480
BLAST of HG10015580 vs. ExPASy Swiss-Prot
Match:
Q3ECB8 (Pentatricopeptide repeat-containing protein At1g77170, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E21 PE=2 SV=1)
HSP 1 Score: 247.3 bits (630), Expect = 3.3e-64
Identity = 142/421 (33.73%), Postives = 199/421 (47.27%), Query Frame = 0
Query: 186 EDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTKLEAPRKALS 245
+D+ +++ATLL NCT+L + +IH + R+ +L+ +P +F WN I+RSY + E+P A+
Sbjct: 44 QDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQ 103
Query: 246 VYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYSESGLISLYS 305
VY+ M+RS +LPD Y+LPIV KA Q + F LG +LHSVA+RLG D++ ESG I+LY
Sbjct: 104 VYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYC 163
Query: 306 KVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGLEPDDVTIVS 365
K G+ + ARKVF++N RKLGSWNAII GL+ GRA EAV+MF+ ++RSGLEPDD T+VS
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 366 VTSACGSL---------------------------------------------------- 425
VT++CG L
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 426 ------------------------------------------------------------ 441
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
BLAST of HG10015580 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 7.9e-34
Identity = 89/276 (32.25%), Postives = 132/276 (47.83%), Query Frame = 0
Query: 227 WNTIIRSYTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLH-SVA 286
WNT+I YT + ++AL ++ MLRSG P+ T+ + A + A +G +H +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 287 IRL-GLEFDQYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEA 346
RL G+ + LI +Y+K GD++ A +VF H+ L SWNA+I G + GRA +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 347 VDMFIKLRRSGLEPDDVTIVSVTSACGSLG------------------------------ 406
D+F ++R+ G++PDD+T V + SAC G
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 407 ---------------------------------CEKHGNVEMGEWAAEHLQELEPWNDGV 438
C+ HGNVE+GE AE+L ++EP N G
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574
BLAST of HG10015580 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 2.6e-29
Identity = 83/319 (26.02%), Postives = 141/319 (44.20%), Query Frame = 0
Query: 183 DNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTKLEAPRK 242
DN + V + C + Y+I + + +++ WN++I + + P
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-------WNSMITRCAQSDNPSA 532
Query: 243 ALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYSESGLIS 302
A+ ++ M SGI DC ++ A + + G +H I+ L D YSES LI
Sbjct: 533 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 592
Query: 303 LYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKL-RRSGLEPDDV 362
+Y+K G+LK A VF+ + + SWN+IIA G+ K+++ +F ++ +SG+ PD +
Sbjct: 593 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 652
Query: 363 TIVSVTSACGSLG----------------------------------------------- 422
T + + S+C +G
Sbjct: 653 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 712
Query: 423 ----------------CEKHGNVEMGEWAAEHLQELEPWNDGVYVVLSNIYASNGLWKEM 438
C H NVE+ E A+ L +L+P N G YV++SN +A+ W+ +
Sbjct: 713 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 772
BLAST of HG10015580 vs. ExPASy Swiss-Prot
Match:
P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 5.8e-29
Identity = 69/211 (32.70%), Postives = 116/211 (54.98%), Query Frame = 0
Query: 222 PSSFYWNTIIRSYTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQL 281
P F +N++I+S +KL P ++ Y ML S + P YT V K+ + A +G +
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 282 HSVAIRLGLEFDQYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRA 341
H A+ G D Y ++ L++ YSK GD++ AR+VF++ + + +WN++++G Q G A
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA 189
Query: 342 KEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGCEKHGNVEMGEWAAEH-LQELEPWNDG 401
EA+ +F ++R SG EPD T VS+ SAC G V +G W ++ + E N
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGA-----VSLGSWVHQYIISEGLDLNVK 249
Query: 402 VYVVLSNIYASNGLWKEMQKVREIMKQRQLA 432
+ L N+Y+ G + ++V + MK+ +A
Sbjct: 250 LGTALINLYSRCGDVGKAREVFDKMKETNVA 275
BLAST of HG10015580 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 129.0 bits (323), Expect = 1.3e-28
Identity = 83/297 (27.95%), Postives = 132/297 (44.44%), Query Frame = 0
Query: 210 AHVLRTNMLENHPSSFYWNTIIRSYTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAV 269
A ++ T M E + S WN +I YT+ +ALS++ + R + P Y+ + KA
Sbjct: 339 ARLMFTKMAERNVVS--WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 398
Query: 270 SQAYAFGLGLQLHSVAIRLGLEF------DQYSESGLISLYSKVGDLKCARKVFEQNHHR 329
+ LG+Q H ++ G +F D + + LI +Y K G ++ VF + R
Sbjct: 399 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 458
Query: 330 KLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLG--------- 389
SWNA+I G +Q G EA+++F ++ SG +PD +T++ V SACG G
Sbjct: 459 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 518
Query: 390 ------------------------------------------------------CEKHGN 438
C+ H N
Sbjct: 519 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 578
BLAST of HG10015580 vs. ExPASy TrEMBL
Match:
A0A0A0KRB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612280 PE=4 SV=1)
HSP 1 Score: 646.7 bits (1667), Expect = 6.9e-182
Identity = 362/613 (59.05%), Postives = 392/613 (63.95%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCNNSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELSGDD 60
MHNFKL P+ LL+S KN+DCN+S SLHKLLLPSLSS+ S ARR FY YA LSG++
Sbjct: 47 MHNFKLFPHFLLLSPKNVDCNSS----SLHKLLLPSLSSAASRARRGFYHYAPEPLSGNE 106
Query: 61 ----NENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVGSSP 120
N NNKF LQN G DIHKEGKCLVLPVQD VS KCEERF I D+ SKFTNVGSSP
Sbjct: 107 YVCYNGNNKFELQNGGPDIHKEGKCLVLPVQDVVSDYKCEERFGICDEKKSKFTNVGSSP 166
Query: 121 ESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATEAPV 180
ESSRHTFLTT+G Y Y TK+LETNELR V+FND+QFVD+PKQNKQ AER+A TE P
Sbjct: 167 ESSRHTFLTTAGHCYPNYKTKHLETNELRRLVEFNDLQFVDEPKQNKQPAERNAVTETPF 226
Query: 181 WLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTK 240
WLTYTS NN D ARIVATLLMNCTN+LELYQIHAHVLRTNMLENHPSSFYWN IIRSYT+
Sbjct: 227 WLTYTSYNNMDHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTR 286
Query: 241 LEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYS 300
LE PR AL VYI MLR+GILPDCYTLPIVFKA+S AYAF LGLQLHSVAIRLG EFDQYS
Sbjct: 287 LEVPRIALFVYIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYS 346
Query: 301 ESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGL 360
ESGLISLYSK+GDL+CA KVFEQNH+RKLGSWNAIIAGLSQGGRAKEAV+MFIKLR+SGL
Sbjct: 347 ESGLISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGL 406
Query: 361 EPDDVTIVSVTSACGSL------------------------------------------- 420
EPDD TIVSVTSACGSL
Sbjct: 407 EPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDMYGKCGRMDLA 466
Query: 421 ------------------------------------------------------------ 444
Sbjct: 467 MKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHG 526
BLAST of HG10015580 vs. ExPASy TrEMBL
Match:
A0A6J1HWH4 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467485 PE=4 SV=1)
HSP 1 Score: 614.0 bits (1582), Expect = 4.9e-172
Identity = 348/590 (58.98%), Postives = 380/590 (64.41%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCN---NSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELS 60
MHNFK L N LLVSSKNID N NS A + L LPS S + SCARR F +YA+G+
Sbjct: 1 MHNFKPLRNFLLVSSKNIDYNLLCNSGFTAGPYILPLPSPSCTDSCARRGFCRYAAGKFF 60
Query: 61 GD----DNENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVG 120
G+ D ENNK LQN+GLDIH+E K VLPVQD VSGDKCE RF GD+N SKFTN G
Sbjct: 61 GNEYECDIENNK--LQNQGLDIHQEAKRHVLPVQDVVSGDKCEGRFAYGDNNKSKFTNAG 120
Query: 121 SSPESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATE 180
SS +SS T L G S YNTK+L T++ RP V+FNDV+F+D K NKQLAERDA +
Sbjct: 121 SSSDSSLQTLLMRGGHSPPIYNTKHLATDDFRPLVEFNDVRFIDKLKINKQLAERDARID 180
Query: 181 APVWLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRS 240
P+W TYTSDNN DQ IVATL+MNCT+LLEL QIHAH+LRTNMLEN+PSSF WN IIRS
Sbjct: 181 TPIWSTYTSDNNVDQVSIVATLVMNCTHLLELSQIHAHILRTNMLENYPSSFSWNNIIRS 240
Query: 241 YTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFD 300
YT+LEAPRKALSVYIAMLR+G+ PD YTLPIVFKA+S YAFGLGLQLHSVAIRLGLEFD
Sbjct: 241 YTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFGLGLQLHSVAIRLGLEFD 300
Query: 301 QYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
QYSESGLISLYSK+GDL+CARKVFE+NHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR
Sbjct: 301 QYSESGLISLYSKLGDLECARKVFEKNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
Query: 361 SGLEPDDVTIVSVTSACGSLG--------------------------------------- 420
SGLEPDDVTIVSVTSACGSLG
Sbjct: 361 SGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVIGKSDILMLNSLIDMYGKCGYA 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 MHGQVKQALENFRCMREAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQL 480
BLAST of HG10015580 vs. ExPASy TrEMBL
Match:
A0A6J1G156 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449720 PE=4 SV=1)
HSP 1 Score: 605.1 bits (1559), Expect = 2.3e-169
Identity = 347/590 (58.81%), Postives = 380/590 (64.41%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCN---NSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELS 60
MHNFK L N LLVSSKNID N NS A + L LPS S + SCARR FY+YA+G+
Sbjct: 1 MHNFKPLRNFLLVSSKNIDYNLLCNSGFTAGPYILPLPSPSCTDSCARRGFYRYAAGKFF 60
Query: 61 GDDN----ENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVG 120
G++ ENNK LQN+GLDIH+E K VLPVQD VSGDKC+ RFV GD+N SKFTNVG
Sbjct: 61 GNEYECGIENNK--LQNQGLDIHQEAKRHVLPVQDVVSGDKCDGRFVYGDNNKSKFTNVG 120
Query: 121 SSPESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATE 180
SS + T L G YNTK+L T++ RP V+FNDV+F+D K NKQLAERDA +
Sbjct: 121 SSLQ----TVLMRGGHFPPIYNTKHLATDDFRPLVEFNDVRFIDKLKINKQLAERDARID 180
Query: 181 APVWLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRS 240
AP+ TYTSDNN DQ IVATLLMNCT+LLEL QIHAH+LRTNMLEN+PSSF WN IIR
Sbjct: 181 APIRSTYTSDNNVDQVSIVATLLMNCTHLLELSQIHAHILRTNMLENYPSSFSWNNIIRK 240
Query: 241 YTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFD 300
YT+LEAPRKALSVYIAMLR+G+ PD YTLPIVFKA+S YAFGLGLQLHSVAIRLGLEFD
Sbjct: 241 YTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFGLGLQLHSVAIRLGLEFD 300
Query: 301 QYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
QYSESGLISLYSK+GDL+CARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR
Sbjct: 301 QYSESGLISLYSKLGDLECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
Query: 361 SGLEPDDVTIVSVTSACGSLG--------------------------------------- 420
SGLEPDDVTIVSVTSACGSLG
Sbjct: 361 SGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKATGKSDILMLNSLIDMYGKCGYA 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 MHGQVKQALENFRCMREAGVPPNNVTFIGVLSACVHGGMVKEGRHYFEMMKSVYGYKPQL 480
BLAST of HG10015580 vs. ExPASy TrEMBL
Match:
A0A6J1HYV7 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467485 PE=4 SV=1)
HSP 1 Score: 604.0 bits (1556), Expect = 5.1e-169
Identity = 348/616 (56.49%), Postives = 380/616 (61.69%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCN---NSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELS 60
MHNFK L N LLVSSKNID N NS A + L LPS S + SCARR F +YA+G+
Sbjct: 1 MHNFKPLRNFLLVSSKNIDYNLLCNSGFTAGPYILPLPSPSCTDSCARRGFCRYAAGKFF 60
Query: 61 GD----DNENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVG 120
G+ D ENNK LQN+GLDIH+E K VLPVQD VSGDKCE RF GD+N SKFTN G
Sbjct: 61 GNEYECDIENNK--LQNQGLDIHQEAKRHVLPVQDVVSGDKCEGRFAYGDNNKSKFTNAG 120
Query: 121 SSPESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATE 180
SS +SS T L G S YNTK+L T++ RP V+FNDV+F+D K NKQLAERDA +
Sbjct: 121 SSSDSSLQTLLMRGGHSPPIYNTKHLATDDFRPLVEFNDVRFIDKLKINKQLAERDARID 180
Query: 181 APVWLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRS 240
P+W TYTSDNN DQ IVATL+MNCT+LLEL QIHAH+LRTNMLEN+PSSF WN IIRS
Sbjct: 181 TPIWSTYTSDNNVDQVSIVATLVMNCTHLLELSQIHAHILRTNMLENYPSSFSWNNIIRS 240
Query: 241 YTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFD 300
YT+LEAPRKALSVYIAMLR+G+ PD YTLPIVFKA+S YAFGLGLQLHSVAIRLGLEFD
Sbjct: 241 YTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFGLGLQLHSVAIRLGLEFD 300
Query: 301 QYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
QYSESGLISLYSK+GDL+CARKVFE+NHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR
Sbjct: 301 QYSESGLISLYSKLGDLECARKVFEKNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
Query: 361 SGLEPDDVTIVSVTSACGSLG--------------------------------------- 420
SGLEPDDVTIVSVTSACGSLG
Sbjct: 361 SGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKVIGKSDILMLNSLIDMYGKCGRM 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 DLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMREAGVPPNNVTFIGVLSAC 480
BLAST of HG10015580 vs. ExPASy TrEMBL
Match:
A0A6J1G132 (pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449720 PE=4 SV=1)
HSP 1 Score: 595.1 bits (1533), Expect = 2.4e-166
Identity = 347/616 (56.33%), Postives = 380/616 (61.69%), Query Frame = 0
Query: 1 MHNFKLLPNSLLVSSKNIDCN---NSSLAASLHKLLLPSLSSSTSCARRAFYQYASGELS 60
MHNFK L N LLVSSKNID N NS A + L LPS S + SCARR FY+YA+G+
Sbjct: 1 MHNFKPLRNFLLVSSKNIDYNLLCNSGFTAGPYILPLPSPSCTDSCARRGFYRYAAGKFF 60
Query: 61 GDDN----ENNKFPLQNRGLDIHKEGKCLVLPVQDAVSGDKCEERFVIGDDNVSKFTNVG 120
G++ ENNK LQN+GLDIH+E K VLPVQD VSGDKC+ RFV GD+N SKFTNVG
Sbjct: 61 GNEYECGIENNK--LQNQGLDIHQEAKRHVLPVQDVVSGDKCDGRFVYGDNNKSKFTNVG 120
Query: 121 SSPESSRHTFLTTSGRSYLTYNTKNLETNELRPPVDFNDVQFVDDPKQNKQLAERDAATE 180
SS + T L G YNTK+L T++ RP V+FNDV+F+D K NKQLAERDA +
Sbjct: 121 SSLQ----TVLMRGGHFPPIYNTKHLATDDFRPLVEFNDVRFIDKLKINKQLAERDARID 180
Query: 181 APVWLTYTSDNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRS 240
AP+ TYTSDNN DQ IVATLLMNCT+LLEL QIHAH+LRTNMLEN+PSSF WN IIR
Sbjct: 181 APIRSTYTSDNNVDQVSIVATLLMNCTHLLELSQIHAHILRTNMLENYPSSFSWNNIIRK 240
Query: 241 YTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFD 300
YT+LEAPRKALSVYIAMLR+G+ PD YTLPIVFKA+S YAFGLGLQLHSVAIRLGLEFD
Sbjct: 241 YTRLEAPRKALSVYIAMLRAGVFPDSYTLPIVFKALSLVYAFGLGLQLHSVAIRLGLEFD 300
Query: 301 QYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
QYSESGLISLYSK+GDL+CARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR
Sbjct: 301 QYSESGLISLYSKLGDLECARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRR 360
Query: 361 SGLEPDDVTIVSVTSACGSLG--------------------------------------- 420
SGLEPDDVTIVSVTSACGSLG
Sbjct: 361 SGLEPDDVTIVSVTSACGSLGDLELSLQMHKFVFQVKATGKSDILMLNSLIDMYGKCGRM 420
Query: 421 ------------------------------------------------------------ 444
Sbjct: 421 DLALKVFSNMDHRNVSSWTSLIVGYAMHGQVKQALENFRCMREAGVPPNNVTFIGVLSAC 480
BLAST of HG10015580 vs. TAIR 10
Match:
AT1G77170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 247.3 bits (630), Expect = 2.3e-65
Identity = 142/421 (33.73%), Postives = 199/421 (47.27%), Query Frame = 0
Query: 186 EDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTKLEAPRKALS 245
+D+ +++ATLL NCT+L + +IH + R+ +L+ +P +F WN I+RSY + E+P A+
Sbjct: 44 QDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQ 103
Query: 246 VYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYSESGLISLYS 305
VY+ M+RS +LPD Y+LPIV KA Q + F LG +LHSVA+RLG D++ ESG I+LY
Sbjct: 104 VYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYC 163
Query: 306 KVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGLEPDDVTIVS 365
K G+ + ARKVF++N RKLGSWNAII GL+ GRA EAV+MF+ ++RSGLEPDD T+VS
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 366 VTSACGSL---------------------------------------------------- 425
VT++CG L
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 426 ------------------------------------------------------------ 441
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
BLAST of HG10015580 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 146.4 bits (368), Expect = 5.6e-35
Identity = 89/276 (32.25%), Postives = 132/276 (47.83%), Query Frame = 0
Query: 227 WNTIIRSYTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLH-SVA 286
WNT+I YT + ++AL ++ MLRSG P+ T+ + A + A +G +H +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 287 IRL-GLEFDQYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEA 346
RL G+ + LI +Y+K GD++ A +VF H+ L SWNA+I G + GRA +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 347 VDMFIKLRRSGLEPDDVTIVSVTSACGSLG------------------------------ 406
D+F ++R+ G++PDD+T V + SAC G
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 407 ---------------------------------CEKHGNVEMGEWAAEHLQELEPWNDGV 438
C+ HGNVE+GE AE+L ++EP N G
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574
BLAST of HG10015580 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 131.3 bits (329), Expect = 1.9e-30
Identity = 83/319 (26.02%), Postives = 141/319 (44.20%), Query Frame = 0
Query: 183 DNNEDQARIVATLLMNCTNLLELYQIHAHVLRTNMLENHPSSFYWNTIIRSYTKLEAPRK 242
DN + V + C + Y+I + + +++ WN++I + + P
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-------WNSMITRCAQSDNPSA 532
Query: 243 ALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQLHSVAIRLGLEFDQYSESGLIS 302
A+ ++ M SGI DC ++ A + + G +H I+ L D YSES LI
Sbjct: 533 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 592
Query: 303 LYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRAKEAVDMFIKL-RRSGLEPDDV 362
+Y+K G+LK A VF+ + + SWN+IIA G+ K+++ +F ++ +SG+ PD +
Sbjct: 593 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 652
Query: 363 TIVSVTSACGSLG----------------------------------------------- 422
T + + S+C +G
Sbjct: 653 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 712
Query: 423 ----------------CEKHGNVEMGEWAAEHLQELEPWNDGVYVVLSNIYASNGLWKEM 438
C H NVE+ E A+ L +L+P N G YV++SN +A+ W+ +
Sbjct: 713 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 772
BLAST of HG10015580 vs. TAIR 10
Match:
AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 130.2 bits (326), Expect = 4.2e-30
Identity = 69/211 (32.70%), Postives = 116/211 (54.98%), Query Frame = 0
Query: 222 PSSFYWNTIIRSYTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAVSQAYAFGLGLQL 281
P F +N++I+S +KL P ++ Y ML S + P YT V K+ + A +G +
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 282 HSVAIRLGLEFDQYSESGLISLYSKVGDLKCARKVFEQNHHRKLGSWNAIIAGLSQGGRA 341
H A+ G D Y ++ L++ YSK GD++ AR+VF++ + + +WN++++G Q G A
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA 189
Query: 342 KEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLGCEKHGNVEMGEWAAEH-LQELEPWNDG 401
EA+ +F ++R SG EPD T VS+ SAC G V +G W ++ + E N
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGA-----VSLGSWVHQYIISEGLDLNVK 249
Query: 402 VYVVLSNIYASNGLWKEMQKVREIMKQRQLA 432
+ L N+Y+ G + ++V + MK+ +A
Sbjct: 250 LGTALINLYSRCGDVGKAREVFDKMKETNVA 275
BLAST of HG10015580 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 129.0 bits (323), Expect = 9.2e-30
Identity = 83/297 (27.95%), Postives = 132/297 (44.44%), Query Frame = 0
Query: 210 AHVLRTNMLENHPSSFYWNTIIRSYTKLEAPRKALSVYIAMLRSGILPDCYTLPIVFKAV 269
A ++ T M E + S WN +I YT+ +ALS++ + R + P Y+ + KA
Sbjct: 339 ARLMFTKMAERNVVS--WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 398
Query: 270 SQAYAFGLGLQLHSVAIRLGLEF------DQYSESGLISLYSKVGDLKCARKVFEQNHHR 329
+ LG+Q H ++ G +F D + + LI +Y K G ++ VF + R
Sbjct: 399 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 458
Query: 330 KLGSWNAIIAGLSQGGRAKEAVDMFIKLRRSGLEPDDVTIVSVTSACGSLG--------- 389
SWNA+I G +Q G EA+++F ++ SG +PD +T++ V SACG G
Sbjct: 459 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 518
Query: 390 ------------------------------------------------------CEKHGN 438
C+ H N
Sbjct: 519 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 578
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893424.1 | 2.6e-199 | 63.46 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like [Benin... | [more] |
KAE8648806.1 | 1.4e-181 | 59.05 | hypothetical protein Csa_008294 [Cucumis sativus] | [more] |
XP_004135378.1 | 1.4e-181 | 59.05 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial [Cucumis sa... | [more] |
XP_022968170.1 | 1.0e-171 | 58.98 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X2 ... | [more] |
XP_023541141.1 | 8.6e-171 | 58.98 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X3 ... | [more] |
Match Name | E-value | Identity | Description | |
Q3ECB8 | 3.3e-64 | 33.73 | Pentatricopeptide repeat-containing protein At1g77170, mitochondrial OS=Arabidop... | [more] |
Q9LN01 | 7.9e-34 | 32.25 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9STE1 | 2.6e-29 | 26.02 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
P93011 | 5.8e-29 | 32.70 | Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... | [more] |
Q9SIT7 | 1.3e-28 | 27.95 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KRB8 | 6.9e-182 | 59.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612280 PE=4 SV=1 | [more] |
A0A6J1HWH4 | 4.9e-172 | 58.98 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X2 ... | [more] |
A0A6J1G156 | 2.3e-169 | 58.81 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isofor... | [more] |
A0A6J1HYV7 | 5.1e-169 | 56.49 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial isoform X1 ... | [more] |
A0A6J1G132 | 2.4e-166 | 56.33 | pentatricopeptide repeat-containing protein At1g77170, mitochondrial-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
AT1G77170.1 | 2.3e-65 | 33.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 5.6e-35 | 32.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G21300.1 | 1.9e-30 | 26.02 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G33760.1 | 4.2e-30 | 32.70 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G13600.1 | 9.2e-30 | 27.95 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |