HG10015496 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015496
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr02: 27156197 .. 27156529 (-)
RNA-Seq Expression	HG10015496
Synteny	HG10015496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGGAAGCAGATCATTCTACTTTTGACAGCATACGATGACGAGGTCGAACAACTTCCCAAAACTGCAGCCAAACAAGGCGCAGAAGGTCGACAAAGAGATCGCCAGCCACAGCCAGAGAGAAATTTGAGTTTGTGTCCAAATGTGAATGATTTTGAAGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTTTTCAGTATGTTCCTGTCTTGA

mRNA sequence

ATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGGAAGCAGATCATTCTACTTTTGACAGCATACGATGACGAGGTCGAACAACTTCCCAAAACTGCAGCCAAACAAGGCGCAGAAGGTCGACAAAGAGATCGCCAGCCACAGCCAGAGAGAAATTTGAGTTTGTGTCCAAATGTGAATGATTTTGAAGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTTTTCAGTATGTTCCTGTCTTGA

Coding sequence (CDS)

ATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGGAAGCAGATCATTCTACTTTTGACAGCATACGATGACGAGGTCGAACAACTTCCCAAAACTGCAGCCAAACAAGGCGCAGAAGGTCGACAAAGAGATCGCCAGCCACAGCCAGAGAGAAATTTGAGTTTGTGTCCAAATGTGAATGATTTTGAAGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTTTTCAGTATGTTCCTGTCTTGA

Protein sequence

MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVFSMFLS

Homology

[Close]

BLAST of HG10015496 vs. NCBI nr
Match: KAA0034537.1 (uncharacterized protein E6C27_scaffold65G005520 [Cucumis melo var. makuwa] >TYK09091.1 uncharacterized protein E5676_scaffold475G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 90/109 (82.57%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQP 60
           MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ 
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEEQPPRTAAKPGAKVQQRDRWPQI 60

Query: 61  ERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVFSMFL 110
           + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYKKYCV SMFL
Sbjct: 61  KGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCVLSMFL 109

[Close]

BLAST of HG10015496 vs. NCBI nr
Match: XP_011655764.1 (uncharacterized protein LOC105435583 [Cucumis sativus] >KGN52059.1 hypothetical protein Csa_007739 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 92/107 (85.98%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQP 60
           MDFKAELNTQ+ EEED YYAEIRKQI LLLTAY  DDEVEQLPKTAAK GAE RQRD  P
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60

Query: 61  QPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVF 106
           Q ERN+SLCPN NDF+EPVWHVNSWENGNGTGVFIP+AVKYKKYCVF
Sbjct: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVF 107

[Close]

BLAST of HG10015496 vs. NCBI nr
Match: XP_008446569.1 (PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQP 60
           MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ 
Sbjct: 58  MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEEQPPRTAAKPGAKVQQRDRWPQI 117

Query: 61  ERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCV 105
           + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYKKYCV
Sbjct: 118 KGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCV 161

[Close]

BLAST of HG10015496 vs. NCBI nr
Match: XP_023524582.1 (uncharacterized protein LOC111788475 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 9.0e-37
Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQP 60
           MDFKAELNTQVAEE+D YYAEIRKQIILLLTA   DD+VE+ PKTAAK+GAE   R R P
Sbjct: 58  MDFKAELNTQVAEEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAEQSGR-RHP 117

Query: 61  QPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVF 106
           QPERNLS C N ND E PVWHVNSWENGNGTGVFIP+AVKYK+Y +F
Sbjct: 118 QPERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIF 163

[Close]

BLAST of HG10015496 vs. NCBI nr
Match: XP_023524590.1 (uncharacterized protein LOC111788475 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 9.0e-37
Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQP 60
           MDFKAELNTQVAEE+D YYAEIRKQIILLLTA   DD+VE+ PKTAAK+GAE   R R P
Sbjct: 19  MDFKAELNTQVAEEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAEQSGR-RHP 78

Query: 61  QPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVF 106
           QPERNLS C N ND E PVWHVNSWENGNGTGVFIP+AVKYK+Y +F
Sbjct: 79  QPERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIF 124

[Close]

BLAST of HG10015496 vs. ExPASy TrEMBL
Match: A0A5A7SZ32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00810 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.3e-44
Identity = 90/109 (82.57%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQP 60
           MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ 
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEEQPPRTAAKPGAKVQQRDRWPQI 60

Query: 61  ERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVFSMFL 110
           + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYKKYCV SMFL
Sbjct: 61  KGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCVLSMFL 109

[Close]

BLAST of HG10015496 vs. ExPASy TrEMBL
Match: A0A0A0KT55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608470 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-44
Identity = 92/107 (85.98%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQP 60
           MDFKAELNTQ+ EEED YYAEIRKQI LLLTAY  DDEVEQLPKTAAK GAE RQRD  P
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60

Query: 61  QPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVF 106
           Q ERN+SLCPN NDF+EPVWHVNSWENGNGTGVFIP+AVKYKKYCVF
Sbjct: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVF 107

[Close]

BLAST of HG10015496 vs. ExPASy TrEMBL
Match: A0A1S3BG13 (uncharacterized protein LOC103489264 OS=Cucumis melo OX=3656 GN=LOC103489264 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.7e-42
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQP 60
           MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ 
Sbjct: 58  MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEEQPPRTAAKPGAKVQQRDRWPQI 117

Query: 61  ERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCV 105
           + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYKKYCV
Sbjct: 118 KGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCV 161

[Close]

BLAST of HG10015496 vs. ExPASy TrEMBL
Match: A0A6J1H0R7 (uncharacterized protein LOC111458884 OS=Cucurbita moschata OX=3662 GN=LOC111458884 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36
Identity = 83/107 (77.57%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDD--EVEQLPKTAAKQGAEGRQRDRQP 60
           MDFKAELNTQVAEE+D YYAEIRKQIILLLT YDD  +VE+ PKTAAK+GAE   R R P
Sbjct: 1   MDFKAELNTQVAEEDDGYYAEIRKQIILLLTTYDDDEDVERPPKTAAKRGAEQSGR-RHP 60

Query: 61  QPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVF 106
           Q ERNLS C N ND E PVWHVNSWENGNGTGVFIP+AVKYK+Y +F
Sbjct: 61  QSERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIF 106

[Close]

BLAST of HG10015496 vs. ExPASy TrEMBL
Match: A0A6J1JBG9 (uncharacterized protein LOC111485239 OS=Cucurbita maxima OX=3661 GN=LOC111485239 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-36
Identity = 82/107 (76.64%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 1   MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDD--EVEQLPKTAAKQGAEGRQRDRQP 60
           MDFKAELNTQVAEE+DSYYAEIRKQIILLLT YDD  +VE+ PKTAAK+GAE   R   P
Sbjct: 1   MDFKAELNTQVAEEDDSYYAEIRKQIILLLTTYDDDEDVERPPKTAAKRGAEQSGR-CHP 60

Query: 61  QPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVF 106
           Q ERNLS C N ND EEPVWHVNSWENGNGTGVFIP+AV++K+Y +F
Sbjct: 61  QAERNLSWCLNGNDLEEPVWHVNSWENGNGTGVFIPQAVQFKRYSIF 106

The following BLAST results are available for this feature:

BLAST of HG10015496 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034537.1	1.3e-43	82.57	uncharacterized protein E6C27_scaffold65G005520 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_011655764.1	1.7e-43	85.98	uncharacterized protein LOC105435583 [Cucumis sativus] >KGN52059.1 hypothetical ...	[more]
XP_008446569.1	1.6e-41	82.69	PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo]	[more]
XP_023524582.1	9.0e-37	78.50	uncharacterized protein LOC111788475 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023524590.1	9.0e-37	78.50	uncharacterized protein LOC111788475 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10015496 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10015496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZ32	6.3e-44	82.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KT55	8.2e-44	85.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608470 PE=4 SV=1	[more]
A0A1S3BG13	7.7e-42	82.69	uncharacterized protein LOC103489264 OS=Cucumis melo OX=3656 GN=LOC103489264 PE=...	[more]
A0A6J1H0R7	1.3e-36	77.57	uncharacterized protein LOC111458884 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JBG9	4.8e-36	76.64	uncharacterized protein LOC111485239 OS=Cucurbita maxima OX=3661 GN=LOC111485239...	[more]

BLAST of HG10015496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..66
None	No IPR available	PANTHER	PTHR34956	OS05G0397300 PROTEIN	coord: 4..99
None	No IPR available	PANTHER	PTHR34956:SF1	SUBFAMILY NOT NAMED	coord: 4..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015496.1	HG10015496.1	mRNA