HG10015488 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015488
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Location	Chr02: 27079263 .. 27081734 (+)
RNA-Seq Expression	HG10015488
Synteny	HG10015488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAAATAATACGAAACTAATCTTCACTTCGACAACTCAAGATATTCAAATACAGTTGTACGTTCTCTTATAGATATAGCATAGTAATTGAAGTCTCATTCATCTTATTATTATTGATTTTAAATATAAAAAAATACAATTAGAGATTTGGTGAGATTATCAAATTTTTAAGATACTTATTTTGGATGAGCCGAGCTAATAGGATGAACTAAACGAGTTCTGCATTATGAACTATGTATCACGCATATGACTTAGATGTGCTTTAAAAAGTCACATAGGGGAAATGAAGAAATATAATATGAAAAGAGACTCGGATTCTATTTGTACTGTATCTGAGATGAATCTTGGCCATTCCCGCCTTTCAACTCCCCTAGACTAGACTTTTGGGTCTTATAAGGAACTAATTGAACCTTTCAAATATGTATAAAGTATTAATTGAACGCGAGGAGACAGAATATGAACAAATAAAAAAGAAGAGGAAACAAAATAAAATTCTTTTCTTTTACATATCTATATACATCCTTTACATATTTATATAAATATCCTCTTTATCTTTACTTGTCTATTTTACTCATCTATAAATAGAGTAAAAAATATATATAGTTTAGTTAAAGGGTAGATTTCCAGACATCATGATGTATCGGTATTTTTCATGATCTATATTATTAATGAATCCGTAGAATAGATACTCATACAAATTCATGATGTGCCAAGAACCAGATTTGACACTTCAATCATTTATGATGATCCCTCCAAACAAGCACAAGCTTATCGACAAATGTCTCTTCTTTTACGAAGACCGCCGGGCCGCGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAACCCAAAAATTCTTTCACAAAATAATCCATCTTTTTCAGGTTTATTGGTTTTGTAATGAAAAGTATAGGGTTTTGTTACCTCTCCAACTATCTCGCCATTAGGTAGGGTTTTATTGGCCCAAGCACTTATTTGTTGAGGAGAAACTAATCCAATTCGGAGTTGTTGATGTTTATACCGATCGATCATAGAAAAAATTTTCTGATTCATTTTGATTAAGCTTCCTTCCTATTAATCTGGAAGTTCTTCTCAGATACAAGGAAATGATTCAGTTCCAAAGCCAAAGATCGTAATTCTCGAACGAGCAATCGAAAAGATTCTGGAGTATCCTCAGGTTTAGGTATTGTTCCTCCAATGATTGTAGTACCAAGTACTTCTTGCCGAGCTCTAATATGATCAGATTTATAAGTAAGCATCTCTTGTAAAATATGAGCAACACCAAATCCTTCTAGAGCCCAAACCTCCATTTCCCCCACCCGTTGTCCACCTTGCTTGGTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGTACACCTTTGGCTAATTTGATTCGATGGAGAGATAAACCAGTGGCTCTTTCCATTGTGCAAGCAAGATTAGTTGGATTAGCCCACGTCATTGTTTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCCTTTTGCTCCTCAGCGTACGGGGTATTAGCAGCCGTTTCCCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGA

mRNA sequence

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGATACAAGGAAATGATTCAGTTCCAAAGCCAAAGATCGTAATTCTCGAACGAGCAATCGAAAAGATTCTGGAGTATCCTCAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCCTTTTGCTCCTCAGCGTACGGGGTATTAGCAGCCGTTTCCCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGA

Coding sequence (CDS)

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGATACAAGGAAATGATTCAGTTCCAAAGCCAAAGATCGTAATTCTCGAACGAGCAATCGAAAAGATTCTGGAGTATCCTCAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCCTTTTGCTCCTCAGCGTACGGGGTATTAGCAGCCGTTTCCCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGA

Protein sequence

MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWIQGNDSVPKPKIVILERAIEKILEYPQESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCSSAYGVLAAVSRGIDGDSQISQNRI

Homology

[Close]

BLAST of HG10015488 vs. NCBI nr
Match: YP_009236283.1 (NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317389.1 NADH dehydrogenase subunit J [Coccinia grandis] >YP_009420797.1 NADH dehydrogenase subunit J [Citrullus colocynthis] >YP_009430630.1 NADH dehydrogenase subunit J [Gynostemma cardiospermum] >YP_009431645.1 NADH dehydrogenase subunit J [Citrullus rehmii] >YP_009439807.1 NADH dehydrogenase subunit J [Gynostemma laxiflorum] >YP_009439894.1 NADH dehydrogenase subunit J [Gynostemma caulopterum] >YP_009440160.1 NADH dehydrogenase subunit J [Gynostemma longipes] >YP_009440247.1 NADH dehydrogenase subunit J [Gynostemma burmanicum (nom. inval.)] >YP_009440334.1 NADH dehydrogenase subunit J [Gynostemma pubescens] >YP_009447453.1 NADH dehydrogenase subunit J [Cucurbita maxima] >YP_009447538.1 NADH dehydrogenase subunit J [Cucurbita moschata] >YP_009456064.1 NADH dehydrogenase subunit J [Momordica charantia] >YP_009456149.1 NADH dehydrogenase subunit J [Lagenaria siceraria] >YP_009468864.1 NADH dehydrogenase subunit J [Gynostemma compressum] >YP_009505083.1 NADH dehydrogenase subunit J [Cucurbita pepo] >YP_009751825.1 NADH dehydrogenase subunit J [Indofevillea khasiana] >YP_009751993.1 NADH dehydrogenase subunit J [Cionosicys macranthus] >YP_009752078.1 NADH dehydrogenase subunit J [Dendrosicyos socotranus] >YP_009752669.1 NADH dehydrogenase subunit J [Ampelosycios humblotii] >YP_009752753.1 NADH dehydrogenase subunit J [Cyclantheropsis parviflora] >YP_009752838.1 NADH dehydrogenase subunit J [Baijiania yunnanensis] >YP_009753007.1 NADH dehydrogenase subunit J [Gerrardanthus macrorhizus] >YP_009753092.1 NADH dehydrogenase subunit J [Corallocarpus boehmii] >YP_009753261.1 NADH dehydrogenase subunit J [Nothoalsomitra suberosa] >YP_010015142.1 NADH dehydrogenase subunit J [Gynostemma yixingense] >YP_010131097.1 NADH-plastoquinone oxidoreductase subunit J [Benincasa hispida] >ALO21769.1 NdhJ [Cucurbita argyrosperma] >ALO21826.1 NdhJ [Cucurbita argyrosperma var. palmeri] >ALO21847.1 NdhJ [Cucurbita argyrosperma subsp. sororia] >ALO22065.1 NdhJ [Cucurbita ecuadorensis] >ALO22136.1 NdhJ [Cucurbita ficifolia] >ALO22158.1 NdhJ [Cucurbita foetidissima] >ALO22241.1 NdhJ [Cucurbita lundelliana] >ALO22331.1 NdhJ [Cucurbita maxima subsp. andreana] >ALO22449.1 NdhJ [Cucurbita okeechobeensis] >ALO22487.1 NdhJ [Cucurbita okeechobeensis subsp. martinezii] >ALO22587.1 NdhJ [Cucurbita pepo subsp. fraterna] >ALO22650.1 NdhJ [Cucurbita pepo subsp. ovifera] >ALO22728.1 NdhJ [Cucurbita pepo var. ozarkana] >ALO22760.1 NdhJ [Cucurbita pepo subsp. pepo] >ALO22812.1 NdhJ [Cucurbita pepo var. texana] >ALO22928.1 NdhJ [Cucurbita pedatifolia] >QNM38534.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria var. microcarpa] >QZL38596.1 NADH dehydrogenase subunit J [Citrullus naudinianus] >QZL38684.1 NADH dehydrogenase subunit J [Citrullus ecirrhosus])

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. NCBI nr
Match: ALO21898.1 (NdhJ [Cucurbita cordata] >ALO21971.1 NdhJ [Cucurbita digitata])

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. NCBI nr
Match: YP_009751741.1 (NADH dehydrogenase subunit J [Herpetospermum pedunculosum] >QIT04474.1 NADH dehydrogenase subunit J [Herpetospermum pedunculosum] >QJR52959.1 NADH-plastoquinone oxidoreductase subunit J [Herpetospermum pedunculosum])

HSP 1 Score: 298.1 bits (762), Expect = 6.6e-77
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKP+EWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPQEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. NCBI nr
Match: AHM88883.1 (NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >QIT04053.1 NADH dehydrogenase subunit J [Luffa aegyptiaca] >QKX48476.1 NADH-plastoquinone oxidoreductase subunit J [Luffa acutangula] >AHM88941.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >AHM88999.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria])

HSP 1 Score: 297.7 bits (761), Expect = 8.6e-77
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFA RINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFATRINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. NCBI nr
Match: YP_009325992.1 (NADH dehydrogenase subunit J [Citrullus lanatus] >YP_009348034.1 NADH dehydrogenase subunit J [Citrullus mucosospermus] >YP_009431560.1 NADH dehydrogenase subunit J [Citrullus amarus] >APW82464.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APD52483.1 NADH dehydrogenase subunit J [Citrullus lanatus] >APW82549.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APW82634.1 NADH dehydrogenase subunit J [Citrullus lanatus subsp. vulgaris] >APW82719.1 NADH dehydrogenase subunit J [Citrullus mucosospermus])

HSP 1 Score: 297.7 bits (761), Expect = 8.6e-77
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERES+DMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESFDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. ExPASy Swiss-Prot
Match: Q4VZH2 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-78
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
            YDNHPRLKRILMPESW+
Sbjct: 121 YYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. ExPASy Swiss-Prot
Match: B1A938 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.8e-77
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSVWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPRIPSVFWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESWI
Sbjct: 121 SYDNHPRLKRILMPESWI 138

[Close]

BLAST of HG10015488 vs. ExPASy Swiss-Prot
Match: Q0ZJ17 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-76
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NPRIPSVFWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFASRRNPRIPSVFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESWI
Sbjct: 121 SYDNHPRLKRILMPESWI 138

[Close]

BLAST of HG10015488 vs. ExPASy Swiss-Prot
Match: Q9M3M1 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Spinacia oleracea OX=3562 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.8e-76
Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPRIPSVFWVWKSADF ERESYDM GI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRRNPRIPSVFWVWKSADFQERESYDMFGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESWI
Sbjct: 121 SYDNHPRLKRILMPESWI 138

[Close]

BLAST of HG10015488 vs. ExPASy Swiss-Prot
Match: P31174 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Glycine max OX=3847 GN=ndhJ PE=2 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75
Identity = 127/138 (92.03%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LSSWLVKHGL+HRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSSWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTR+EYGIDQPEEVCIK+F AR NPRIPS+FWVWKSADF E+ESYDMLGI
Sbjct: 61  PGGLLASVYHLTRLEYGIDQPEEVCIKIFVARKNPRIPSIFWVWKSADFQEKESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRL+RILMPESWI
Sbjct: 121 SYDNHPRLRRILMPESWI 138

[Close]

BLAST of HG10015488 vs. ExPASy TrEMBL
Match: A0A109WWM6 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. ExPASy TrEMBL
Match: A0A6H0EQB7 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Indofevillea khasiana OX=383665 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. ExPASy TrEMBL
Match: A0A2Z2CGF1 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Coccinia grandis OX=387127 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. ExPASy TrEMBL
Match: X2F417 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Lagenaria siceraria OX=3668 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. ExPASy TrEMBL
Match: A0A0S2IF70 (NADH-quinone oxidoreductase subunit C OS=Cucurbita moschata OX=3662 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           SYDNHPRLKRILMPESW+
Sbjct: 121 SYDNHPRLKRILMPESWV 138

[Close]

BLAST of HG10015488 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J )

HSP 1 Score: 268.5 bits (685), Expect = 5.2e-72
Identity = 123/138 (89.13%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGTLSVWLAKRGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG++Q EEVCIKVF  R NPRIPSVFWVWKS DF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVNQAEEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWI 139
           +YD+HPRLKRILMPESWI
Sbjct: 121 TYDSHPRLKRILMPESWI 138

The following BLAST results are available for this feature:

BLAST of HG10015488 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009236283.1	2.9e-77	99.28	NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317...	[more]
ALO21898.1	2.9e-77	99.28	NdhJ [Cucurbita cordata] >ALO21971.1 NdhJ [Cucurbita digitata]	[more]
YP_009751741.1	6.6e-77	98.55	NADH dehydrogenase subunit J [Herpetospermum pedunculosum] >QIT04474.1 NADH dehy...	[more]
AHM88883.1	8.6e-77	98.55	NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria] >QIT04053.1 NA...	[more]
YP_009325992.1	8.6e-77	98.55	NADH dehydrogenase subunit J [Citrullus lanatus] >YP_009348034.1 NADH dehydrogen...	[more]

BLAST of HG10015488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH2	1.2e-78	97.83	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=36...	[more]
B1A938	6.8e-77	95.65	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649...	[more]
Q0ZJ17	2.0e-76	94.93	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q9M3M1	9.8e-76	94.20	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Spinacia oleracea OX=...	[more]
P31174	1.7e-75	92.03	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Glycine max OX=3847 G...	[more]

BLAST of HG10015488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A109WWM6	1.4e-77	99.28	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gynostemma pentaphyll...	[more]
A0A6H0EQB7	1.4e-77	99.28	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Indofevillea khasiana...	[more]
A0A2Z2CGF1	1.4e-77	99.28	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Coccinia grandis OX=3...	[more]
X2F417	1.4e-77	99.28	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Lagenaria siceraria O...	[more]
A0A0S2IF70	1.4e-77	99.28	NADH-quinone oxidoreductase subunit C OS=Cucurbita moschata OX=3662 GN=ndhJ PE=3...	[more]

BLAST of HG10015488 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00420.1	5.2e-72	89.13	NADH dehydrogenase subunit J	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	PFAM	PF00329	Complex1_30kDa	coord: 30..138 e-value: 1.5E-25 score: 90.2
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	GENE3D	3.30.460.80	NADH:ubiquinone oxidoreductase, 30kDa subunit	coord: 16..130 e-value: 1.2E-23 score: 86.0
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	SUPERFAMILY	143243	Nqo5-like	coord: 6..138
None	No IPR available	PANTHER	PTHR10884:SF18	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT J, CHLOROPLASTIC	coord: 53..139
None	No IPR available	PANTHER	PTHR10884	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3	coord: 53..139
IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site	PROSITE	PS00542	COMPLEX1_30K	coord: 111..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015488.1	HG10015488.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H