HG10015484 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015484
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein TIC 214
Location	Chr02: 27069035 .. 27069385 (-)
RNA-Seq Expression	HG10015484
Synteny	HG10015484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGA

mRNA sequence

ATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGA

Coding sequence (CDS)

ATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGA

Protein sequence

MHEDNQFGRCGRTLLWISDHILHRPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLCFISSGTITNTFLIMDLLPETQCVILAFNVYS

Homology

[Close]

BLAST of HG10015484 vs. NCBI nr
Match: PRQ36545.1 (putative protein TIC214 [Rosa chinensis])

HSP 1 Score: 157.5 bits (397), Expect = 6.8e-35
Identity = 79/89 (88.76%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MHEDNQFGRCGRTLLWISDHILHRPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMM 60
          MHEDNQFGRCGRTLLWISDHI   PSYLFLLRARVM   EEGTEKKVSATTGFITGQLMM
Sbjct: 1  MHEDNQFGRCGRTLLWISDHIPIGPSYLFLLRARVMEEGEEGTEKKVSATTGFITGQLMM 60

Query: 61 FISIYYAPLHLALGRPHTITVLALPYLCF 87
          FI IYYAPLHLALGRPHTIT+ ALPYL F
Sbjct: 61 FILIYYAPLHLALGRPHTITIQALPYLLF 89

[Close]

BLAST of HG10015484 vs. NCBI nr
Match: RZC58808.1 (hypothetical protein C5167_006125 [Papaver somniferum])

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 80/92 (86.96%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRARVMEEGTEK+VS TT FITGQLMMFISIYYAPLHLA GRPHTITVL LPYL
Sbjct: 24  PSYLFLLRARVMEEGTEKEVSETTDFITGQLMMFISIYYAPLHLAFGRPHTITVLVLPYL 83

Query: 85  CFISSGTITNTFLIMDLLPETQCVILAFNVYS 117
            F SSGT T  FLIMDLLPETQCVI  FNVYS
Sbjct: 84  LFHSSGTTTKKFLIMDLLPETQCVISTFNVYS 115

[Close]

BLAST of HG10015484 vs. NCBI nr
Match: VDD24536.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 84/120 (70.00%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISDHILHR----PSYLFLLRARVMEEGTEKKVSATTGFITGQLM 60
           MHEDNQFGRCGRTLLWISDHILHR     S+  L      ++  +KK SATTGFI GQLM
Sbjct: 1   MHEDNQFGRCGRTLLWISDHILHRGPLISSFSELGLWTKEKKERKKKKSATTGFIAGQLM 60

Query: 61  MFISIYYAPLHLALGRPHTITVLALPYLCFISSGTITNTFLIMDLLPETQCVILAFNVYS 117
           MFISIYYAPLHLALGRPHTITVLALPYL F         F  MDLLPE +CVI AFNVYS
Sbjct: 61  MFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFFMDLLPEMKCVIFAFNVYS 120

[Close]

BLAST of HG10015484 vs. NCBI nr
Match: VDD65314.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30
Identity = 78/95 (82.11%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           PSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 39  PSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 98

Query: 85  PYLCFISSGTITNTFLIMDLLPETQCVILAFNVYS 117
           PYL F         FLIMDLLPE +CVI AFNVYS
Sbjct: 99  PYLLFHFFWNNHKHFLIMDLLPEMKCVIFAFNVYS 133

[Close]

BLAST of HG10015484 vs. NCBI nr
Match: VDD65572.1 (unnamed protein product [Brassica oleracea] >VDD65832.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 140.6 bits (353), Expect = 8.6e-30
Identity = 76/94 (80.85%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           PSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 24  PSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 83

Query: 85  PYLCFISSGTITNTFLIMDLLPETQCVILAFNVY 116
           PYL F         FLIMDLLPE +CVI AFNV+
Sbjct: 84  PYLLFHFFWNNHKHFLIMDLLPEMKCVIFAFNVF 117

[Close]

BLAST of HG10015484 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL
Sbjct: 39  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 98

Query: 85  CF 87
            F
Sbjct: 99  LF 100

[Close]

BLAST of HG10015484 vs. ExPASy Swiss-Prot
Match: A0A393 (Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-27
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL
Sbjct: 39  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 98

Query: 85  CF 87
            F
Sbjct: 99  LF 100

[Close]

BLAST of HG10015484 vs. ExPASy Swiss-Prot
Match: Q3C1P6 (Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL
Sbjct: 39  PSYLFLLRALVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 98

Query: 85  CF 87
            F
Sbjct: 99  LF 100

[Close]

BLAST of HG10015484 vs. ExPASy Swiss-Prot
Match: Q33BW4 (Protein TIC 214 OS=Nicotiana tomentosiformis OX=4098 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL
Sbjct: 39  PSYLFLLRALVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 98

Query: 85  CF 87
            F
Sbjct: 99  LF 100

[Close]

BLAST of HG10015484 vs. ExPASy Swiss-Prot
Match: Q2MIC9 (Protein TIC 214 OS=Solanum bulbocastanum OX=147425 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL
Sbjct: 39  PSYLFLLRALVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 98

Query: 85  CF 87
            F
Sbjct: 99  LF 100

[Close]

BLAST of HG10015484 vs. ExPASy TrEMBL
Match: A0A251RRP8 (Protein TIC 214 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0557821 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.1e-36
Identity = 79/89 (88.76%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MHEDNQFGRCGRTLLWISDHILHRPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMM 60
          MHEDNQFGRCGRTLLWISDHILHR  YLFLLR  VM   EEG EKKVSATTGFITGQL+M
Sbjct: 1  MHEDNQFGRCGRTLLWISDHILHRTPYLFLLRTHVMEEGEEGAEKKVSATTGFITGQLIM 60

Query: 61 FISIYYAPLHLALGRPHTITVLALPYLCF 87
          FISIYYAPLHLALGRPHTITVLALPYL F
Sbjct: 61 FISIYYAPLHLALGRPHTITVLALPYLLF 89

[Close]

BLAST of HG10015484 vs. ExPASy TrEMBL
Match: A0A2P6QQT4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0392781 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.3e-35
Identity = 79/89 (88.76%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MHEDNQFGRCGRTLLWISDHILHRPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMM 60
          MHEDNQFGRCGRTLLWISDHI   PSYLFLLRARVM   EEGTEKKVSATTGFITGQLMM
Sbjct: 1  MHEDNQFGRCGRTLLWISDHIPIGPSYLFLLRARVMEEGEEGTEKKVSATTGFITGQLMM 60

Query: 61 FISIYYAPLHLALGRPHTITVLALPYLCF 87
          FI IYYAPLHLALGRPHTIT+ ALPYL F
Sbjct: 61 FILIYYAPLHLALGRPHTITIQALPYLLF 89

[Close]

BLAST of HG10015484 vs. ExPASy TrEMBL
Match: A0A4Y7JG87 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_006125 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.6e-35
Identity = 80/92 (86.96%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 25  PSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYL 84
           PSYLFLLRARVMEEGTEK+VS TT FITGQLMMFISIYYAPLHLA GRPHTITVL LPYL
Sbjct: 24  PSYLFLLRARVMEEGTEKEVSETTDFITGQLMMFISIYYAPLHLAFGRPHTITVLVLPYL 83

Query: 85  CFISSGTITNTFLIMDLLPETQCVILAFNVYS 117
            F SSGT T  FLIMDLLPETQCVI  FNVYS
Sbjct: 84  LFHSSGTTTKKFLIMDLLPETQCVISTFNVYS 115

[Close]

BLAST of HG10015484 vs. ExPASy TrEMBL
Match: A0A3P6DAS3 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC58T46457Z PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.6e-35
Identity = 84/120 (70.00%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISDHILHR----PSYLFLLRARVMEEGTEKKVSATTGFITGQLM 60
           MHEDNQFGRCGRTLLWISDHILHR     S+  L      ++  +KK SATTGFI GQLM
Sbjct: 1   MHEDNQFGRCGRTLLWISDHILHRGPLISSFSELGLWTKEKKERKKKKSATTGFIAGQLM 60

Query: 61  MFISIYYAPLHLALGRPHTITVLALPYLCFISSGTITNTFLIMDLLPETQCVILAFNVYS 117
           MFISIYYAPLHLALGRPHTITVLALPYL F         F  MDLLPE +CVI AFNVYS
Sbjct: 61  MFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFFMDLLPEMKCVIFAFNVYS 120

[Close]

BLAST of HG10015484 vs. ExPASy TrEMBL
Match: A0A3P6H5A4 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC29T60542H PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.9e-31
Identity = 78/95 (82.11%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           PSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 39  PSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 98

Query: 85  PYLCFISSGTITNTFLIMDLLPETQCVILAFNVYS 117
           PYL F         FLIMDLLPE +CVI AFNVYS
Sbjct: 99  PYLLFHFFWNNHKHFLIMDLLPEMKCVIFAFNVYS 133

[Close]

BLAST of HG10015484 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26
Identity = 60/65 (92.31%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           PSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 40  PSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 99

Query: 85  PYLCF 87
           PYL F
Sbjct: 100 PYLLF 104

[Close]

BLAST of HG10015484 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26
Identity = 60/65 (92.31%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           PSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 40  PSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 99

Query: 85  PYLCF 87
           PYL F
Sbjct: 100 PYLLF 104

[Close]

BLAST of HG10015484 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26
Identity = 60/65 (92.31%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           PSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 39  PSYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 98

Query: 85  PYLCF 87
           PYL F
Sbjct: 99  PYLLF 103

[Close]

BLAST of HG10015484 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-25
Identity = 59/65 (90.77%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 25  PSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL 84
           P YLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Sbjct: 39  PFYLFLLRARVMDEGEEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLAL 98

Query: 85  PYLCF 87
           PYL F
Sbjct: 99  PYLLF 103

The following BLAST results are available for this feature:

BLAST of HG10015484 vs. NCBI nr


Match Name	E-value	Identity	Description
PRQ36545.1	6.8e-35	88.76	putative protein TIC214 [Rosa chinensis]	[more]
RZC58808.1	1.2e-34	86.96	hypothetical protein C5167_006125 [Papaver somniferum]	[more]
VDD24536.1	1.2e-34	70.00	unnamed protein product [Brassica rapa]	[more]
VDD65314.1	1.0e-30	82.11	unnamed protein product [Brassica oleracea]	[more]
VDD65572.1	8.6e-30	80.85	unnamed protein product [Brassica oleracea] >VDD65832.1 unnamed protein product ...	[more]

BLAST of HG10015484 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MM95	3.2e-27	98.39	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
A0A393	3.2e-27	98.39	Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1	[more]
Q3C1P6	2.1e-26	96.77	Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1	[more]
Q33BW4	2.1e-26	96.77	Protein TIC 214 OS=Nicotiana tomentosiformis OX=4098 GN=TIC214 PE=3 SV=1	[more]
Q2MIC9	2.1e-26	96.77	Protein TIC 214 OS=Solanum bulbocastanum OX=147425 GN=TIC214 PE=3 SV=1	[more]

BLAST of HG10015484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A251RRP8	5.1e-36	88.76	Protein TIC 214 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0557821 PE=3 SV=1	[more]
A0A2P6QQT4	3.3e-35	88.76	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0392781 PE=4...	[more]
A0A4Y7JG87	5.6e-35	86.96	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_006125 PE=4 SV=1	[more]
A0A3P6DAS3	5.6e-35	70.00	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC58T46457Z PE=4 SV...	[more]
A0A3P6H5A4	4.9e-31	82.11	Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC29T60542H PE=4 SV=1	[more]

BLAST of HG10015484 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	3.6e-26	92.31	Ycf1 protein	[more]
ATCG01000.1	3.6e-26	92.31	Ycf1 protein	[more]
ATMG00370.1	3.6e-26	92.31	Ycf1 protein	[more]
AT2G07739.1	1.8e-25	90.77	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 25..87 e-value: 2.7E-38 score: 131.5
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 25..86
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 25..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015484.1	HG10015484.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane