HG10015483 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015483
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	30S ribosomal protein S7, chloroplastic
Location	Chr02: 27066677 .. 27067144 (+)
RNA-Seq Expression	HG10015483
Synteny	HG10015483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

mRNA sequence

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Coding sequence (CDS)

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR

Homology

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BLAST of HG10015483 vs. NCBI nr
Match: WP_131767149.1 (30S ribosomal protein S7 [Candidatus Frankia datiscae] >YP_004841829.1 ribosomal protein S7 [Cucumis melo subsp. melo] >YP_004841845.1 ribosomal protein S7 [Cucumis melo subsp. melo] >YP_009236323.1 ribosomal protein S7 [Gynostemma pentaphyllum] >YP_009236335.1 ribosomal protein S7 [Gynostemma pentaphyllum] >YP_009317431.1 ribosomal protein S7 [Coccinia grandis] >YP_009317445.1 ribosomal protein S7 [Coccinia grandis] >YP_009326035.1 ribosomal protein S7 [Citrullus lanatus] >YP_009326050.1 ribosomal protein S7 [Citrullus lanatus] >YP_009348077.1 ribosomal protein S7 [Citrullus mucosospermus] >YP_009348092.1 ribosomal protein S7 [Citrullus mucosospermus] >YP_009420840.1 ribosomal protein S7 [Citrullus colocynthis] >YP_009420855.1 ribosomal protein S7 [Citrullus colocynthis] >YP_009430672.1 ribosomal protein S7 [Gynostemma cardiospermum] >YP_009430688.1 ribosomal protein S7 [Gynostemma cardiospermum] >YP_009431602.1 ribosomal protein S7 [Citrullus amarus] >YP_009431617.1 ribosomal protein S7 [Citrullus amarus] >YP_009431688.1 ribosomal protein S7 [Citrullus rehmii] >YP_009431703.1 ribosomal protein S7 [Citrullus rehmii] >YP_009439849.1 ribosomal protein S7 [Gynostemma laxiflorum] >YP_009439865.1 ribosomal protein S7 [Gynostemma laxiflorum] >YP_009440023.1 ribosomal protein S7 [Gynostemma pentagynum] >YP_009440039.1 ribosomal protein S7 [Gynostemma pentagynum] >YP_009440202.1 ribosomal protein S7 [Gynostemma longipes] >YP_009440218.1 ribosomal protein S7 [Gynostemma longipes] >YP_009440289.1 ribosomal protein S7 [Gynostemma burmanicum (nom. inval.)] >YP_009440305.1 ribosomal protein S7 [Gynostemma burmanicum (nom. inval.)] >YP_009440376.1 ribosomal protein S7 [Gynostemma pubescens] >YP_009440392.1 ribosomal protein S7 [Gynostemma pubescens] >YP_009456106.1 ribosomal protein S7 [Momordica charantia] >YP_009456122.1 ribosomal protein S7 [Momordica charantia] >YP_009456191.1 ribosomal protein S7 [Lagenaria siceraria] >YP_009456207.1 ribosomal protein S7 [Lagenaria siceraria] >YP_009468906.1 ribosomal protein S7 [Gynostemma compressum] >YP_009468922.1 ribosomal protein S7 [Gynostemma compressum] >YP_009525231.1 ribosomal protein S7 [Hodgsonia macrocarpa] >YP_009525244.1 ribosomal protein S7 [Hodgsonia macrocarpa] >YP_009526347.1 ribosomal protein S7 [Hemsleya lijiangensis] >YP_009526363.1 ribosomal protein S7 [Hemsleya lijiangensis] >YP_009560881.1 ribosomal protein S7 [Trichosanthes kirilowii] >YP_009560894.1 ribosomal protein S7 [Trichosanthes kirilowii] >YP_009669949.1 ribosomal protein S7 [Salvertia convallariodora] >YP_009669965.1 ribosomal protein S7 [Salvertia convallariodora] >YP_009674436.1 ribosomal protein S7 [Siraitia grosvenorii] >YP_009674451.1 ribosomal protein S7 [Siraitia grosvenorii] >YP_009707934.1 ribosomal protein S7 [Begonia pulchrifolia] >YP_009707950.1 ribosomal protein S7 [Begonia pulchrifolia] >YP_009738248.1 ribosomal protein S7 [Siraitia siamensis] >YP_009738263.1 ribosomal protein S7 [Siraitia siamensis] >YP_009751530.1 ribosomal protein S7 [Thladiantha dubia] >YP_009751544.1 ribosomal protein S7 [Thladiantha dubia] >YP_009751698.1 ribosomal protein S7 [Hodgsonia heteroclita] >YP_009751712.1 ribosomal protein S7 [Hodgsonia heteroclita] >YP_009751783.1 ribosomal protein S7 [Herpetospermum pedunculosum] >YP_009751796.1 ribosomal protein S7 [Herpetospermum pedunculosum] >YP_009751867.1 ribosomal protein S7 [Indofevillea khasiana] >YP_009751880.1 ribosomal protein S7 [Indofevillea khasiana] >YP_009751951.1 ribosomal protein S7 [Cyclanthera pedata] >YP_009751964.1 ribosomal protein S7 [Cyclanthera pedata] >YP_009752120.1 ribosomal protein S7 [Dendrosicyos socotranus] >YP_009752133.1 ribosomal protein S7 [Dendrosicyos socotranus] >YP_009752203.1 ribosomal protein S7 [Linnaeosicyos amara] >YP_009752288.1 ribosomal protein S7 [Trichosanthes baviensis] >YP_009752301.1 ribosomal protein S7 [Trichosanthes baviensis] >YP_009752372.1 ribosomal protein S7 [Bryonia marmorata] >YP_009752386.1 ribosomal protein S7 [Bryonia marmorata] >YP_009752457.1 ribosomal protein S7 [Trichosanthes tricuspidata] >YP_009752470.1 ribosomal protein S7 [Trichosanthes tricuspidata] >YP_009752541.1 ribosomal protein S7 [Trichosanthes tubiflora] >YP_009752555.1 ribosomal protein S7 [Trichosanthes tubiflora] >YP_009752626.1 ribosomal protein S7 [Trichosanthes homophylla] >YP_009752640.1 ribosomal protein S7 [Trichosanthes homophylla] >YP_009752711.1 ribosomal protein S7 [Ampelosycios humblotii] >YP_009752724.1 ribosomal protein S7 [Ampelosycios humblotii] >YP_009752880.1 ribosomal protein S7 [Baijiania yunnanensis] >YP_009752894.1 ribosomal protein S7 [Baijiania yunnanensis] >YP_009752965.1 ribosomal protein S7 [Momordica sessilifolia] >YP_009752978.1 ribosomal protein S7 [Momordica sessilifolia] >YP_009753049.1 ribosomal protein S7 [Gerrardanthus macrorhizus] >YP_009753063.1 ribosomal protein S7 [Gerrardanthus macrorhizus] >YP_009753219.1 ribosomal protein S7 [Trichosanthes truncata] >YP_009753232.1 ribosomal protein S7 [Trichosanthes truncata] >YP_009753302.1 ribosomal protein S7 [Nothoalsomitra suberosa] >YP_009753316.1 ribosomal protein S7 [Nothoalsomitra suberosa] >YP_009753665.1 ribosomal protein S7 [Trichosanthes wallichiana] >YP_009753679.1 ribosomal protein S7 [Trichosanthes wallichiana] >YP_009753750.1 ribosomal protein S7 [Trichosanthes nervifolia] >YP_009753763.1 ribosomal protein S7 [Trichosanthes nervifolia] >YP_009753834.1 ribosomal protein S7 [Trichosanthes pilosa] >YP_009753848.1 ribosomal protein S7 [Trichosanthes pilosa] >YP_009753919.1 ribosomal protein S7 [Trichosanthes lobata] >YP_009753933.1 ribosomal protein S7 [Trichosanthes lobata] >YP_009775179.1 ribosomal protein S7 [Begonia versicolor] >YP_009775192.1 ribosomal protein S7 [Begonia versicolor] >YP_009860119.1 ribosomal protein S7 [Cucumis melo subsp. agrestis] >YP_009860135.1 ribosomal protein S7 [Cucumis melo subsp. agrestis] >YP_009945460.1 ribosomal protein S7 [Sechium edule] >YP_009945471.1 ribosomal protein S7 [Sechium edule] >YP_010015184.1 ribosomal protein S7 [Gynostemma yixingense] >YP_010015200.1 ribosomal protein S7 [Gynostemma yixingense] >YP_010117490.1 ribosomal protein S7 [Begonia coptidifolia] >YP_010117561.1 ribosomal protein S7 [Begonia coptidifolia] >YP_010119779.1 ribosomal protein S7 [Hemsleya zhejiangensis] >YP_010119794.1 ribosomal protein S7 [Hemsleya zhejiangensis] >YP_010131139.1 ribosomal protein S7 [Benincasa hispida] >YP_010131152.1 ribosomal protein S7 [Benincasa hispida] >APW82508.1 ribosomal protein S7 [Citrullus lanatus subsp. vulgaris] >ASY96646.1 ribosomal protein S7 [Cucumis melo var. conomon] >ASY96734.1 ribosomal protein S7 [Cucumis melo var. makuwa] >ASY96821.1 ribosomal protein S7 [Cucumis melo var. momordica] >ASY96908.1 ribosomal protein S7 [Cucumis melo var. dudaim] >ASY96995.1 ribosomal protein S7 [Cucumis melo var. cantalupo] >ASY97169.1 ribosomal protein S7 [Cucumis melo var. inodorus] >ASY97343.1 ribosomal protein S7 [Cucumis melo var. flexuosus] >AXU40435.1 ribosomal protein S7 [Gomphogyne cissiformis var. villosa] >AXU40609.1 ribosomal protein S7 [Gomphogyne cissiformis var. cissiformis] >QIT04095.1 ribosomal protein S7 [Luffa aegyptiaca] >QJD26515.1 ribosomal protein S7 [Trichosanthes kirilowii var. japonica] >QJD26689.1 ribosomal protein S7 [Trichosanthes rosthornii] >QJF46430.1 ribosomal protein S7 [Cucumis melo] >QKX48520.1 ribosomal protein S7 [Luffa acutangula] >QNM38576.1 ribosomal protein S7 [Lagenaria siceraria var. microcarpa] >QZL38639.1 ribosomal protein S7 [Citrullus naudinianus] >QZL38727.1 ribosomal protein S7 [Citrullus ecirrhosus])

HSP 1 Score: 297.4 bits (760), Expect = 7.4e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. NCBI nr
Match: YP_009763087.1 (ribosomal protein S7 [Mallotus peltatus] >YP_009763096.1 ribosomal protein S7 [Mallotus peltatus] >QQV39218.1 ribosomal protein S7 [Macaranga tanarius] >QZN08105.1 ribosomal protein S7 [Mallotus paniculatus] >QIR63426.1 ribosomal protein S7 [Mallotus peltatus] >QIR63435.1 ribosomal protein S7 [Mallotus peltatus] >QQV39230.1 ribosomal protein S7 [Macaranga tanarius])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. NCBI nr
Match: YP_004072507.1 (ribosomal protein S7 [Corynocarpus laevigatus] >YP_004072519.1 ribosomal protein S7 [Corynocarpus laevigatus] >ADO60355.1 ribosomal protein S7 [Corynocarpus laevigatus] >ADO60367.1 ribosomal protein S7 [Corynocarpus laevigatus])

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. NCBI nr
Match: YP_009753134.1 (ribosomal protein S7 [Corallocarpus boehmii] >YP_009753148.1 ribosomal protein S7 [Corallocarpus boehmii] >QIT06206.1 ribosomal protein S7 [Corallocarpus boehmii] >QIT06220.1 ribosomal protein S7 [Corallocarpus boehmii])

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGA+RKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGAARKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. NCBI nr
Match: YP_009752795.1 (ribosomal protein S7 [Cyclantheropsis parviflora] >YP_009752809.1 ribosomal protein S7 [Cyclantheropsis parviflora] >QIT05445.1 ribosomal protein S7 [Cyclantheropsis parviflora] >QIT05459.1 ribosomal protein S7 [Cyclantheropsis parviflora])

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAF+L
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFQL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy Swiss-Prot
Match: Q49KT8 (30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.7e-79
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy Swiss-Prot
Match: B1NWJ5 (30S ribosomal protein S7, chloroplastic OS=Manihot esculenta OX=3983 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.7e-79
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy Swiss-Prot
Match: P07135 (30S ribosomal protein S7, chloroplastic OS=Glycine max OX=3847 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 4.8e-79
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy Swiss-Prot
Match: Q6EM99 (30S ribosomal protein S7, chloroplastic OS=Euonymus alatus OX=4307 GN=rps7 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.3e-79
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy Swiss-Prot
Match: A4QJG0 (30S ribosomal protein S7, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 8.2e-79
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy TrEMBL
Match: A0A6M3RUB1 (30S ribosomal protein S7, chloroplastic OS=Trichosanthes rosthornii OX=676073 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy TrEMBL
Match: A0A249RYX2 (30S ribosomal protein S7, chloroplastic OS=Cucumis melo var. momordica OX=2034244 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy TrEMBL
Match: A0A343F2D8 (30S ribosomal protein S7, chloroplastic OS=Citrullus colocynthis OX=252529 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy TrEMBL
Match: A0A6H0ET47 (30S ribosomal protein S7, chloroplastic OS=Trichosanthes tubiflora OX=1144424 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. ExPASy TrEMBL
Match: A0A6H0ETM2 (30S ribosomal protein S7, chloroplastic OS=Ampelosycios humblotii OX=386639 GN=rps7 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 294.3 bits (752), Expect = 5.8e-80
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 294.3 bits (752), Expect = 5.8e-80
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of HG10015483 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 22  LVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG 81
           L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V    V 
Sbjct: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 70

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 141
           G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A 
Sbjct: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYQKRGSAR 130

Query: 142 RKKEETHRMAEANRAFAHFR 156
           RK+E  H +A  NR+FAHFR
Sbjct: 131 RKRENLHGLASTNRSFAHFR 146

[Close]

BLAST of HG10015483 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 )

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-13
Identity = 45/140 (32.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 22  LVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG 81
           L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V    V 
Sbjct: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 70

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 141
           G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A 
Sbjct: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYQKRGSAR 130

Query: 142 RKKEETHRMAEANRAFAHFR 156
           RK+E  H +A  NR+FAHFR
Sbjct: 131 RKRENLHGLASTNRSFAHFR 146

[Close]

BLAST of HG10015483 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 21  RLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
           RL N L+     +GKK +A +I+  AM+ I   ++ NP+ V+  AI    P     A R+
Sbjct: 74  RLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGP--REDATRI 133

Query: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 134 GSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 193

Query: 141 AIRKKEETHRMAEANR 150
           AI+KK+E  R+A+ANR
Sbjct: 194 AIKKKDEIERVAKANR 207

The following BLAST results are available for this feature:

BLAST of HG10015483 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_131767149.1	7.4e-77	100.00	30S ribosomal protein S7 [Candidatus Frankia datiscae] >YP_004841829.1 ribosomal...	[more]
YP_009763087.1	9.6e-77	99.35	ribosomal protein S7 [Mallotus peltatus] >YP_009763096.1 ribosomal protein S7 [M...	[more]
YP_004072507.1	1.3e-76	99.35	ribosomal protein S7 [Corynocarpus laevigatus] >YP_004072519.1 ribosomal protein...	[more]
YP_009753134.1	1.6e-76	99.35	ribosomal protein S7 [Corallocarpus boehmii] >YP_009753148.1 ribosomal protein S...	[more]
YP_009752795.1	2.1e-76	99.35	ribosomal protein S7 [Cyclantheropsis parviflora] >YP_009752809.1 ribosomal prot...	[more]

BLAST of HG10015483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT8	3.7e-79	99.35	30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus O...	[more]
B1NWJ5	3.7e-79	99.35	30S ribosomal protein S7, chloroplastic OS=Manihot esculenta OX=3983 GN=rps7-A P...	[more]
P07135	4.8e-79	98.71	30S ribosomal protein S7, chloroplastic OS=Glycine max OX=3847 GN=rps7-A PE=3 SV...	[more]
Q6EM99	6.3e-79	98.71	30S ribosomal protein S7, chloroplastic OS=Euonymus alatus OX=4307 GN=rps7 PE=3 ...	[more]
A4QJG0	8.2e-79	98.71	30S ribosomal protein S7, chloroplastic OS=Aethionema cordifolium OX=434059 GN=r...	[more]

BLAST of HG10015483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3RUB1	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Trichosanthes rosthornii OX=676073 GN...	[more]
A0A249RYX2	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Cucumis melo var. momordica OX=203424...	[more]
A0A343F2D8	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Citrullus colocynthis OX=252529 GN=rp...	[more]
A0A6H0ET47	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Trichosanthes tubiflora OX=1144424 GN...	[more]
A0A6H0ETM2	3.6e-77	100.00	30S ribosomal protein S7, chloroplastic OS=Ampelosycios humblotii OX=386639 GN=r...	[more]

BLAST of HG10015483 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01240.1	5.8e-80	98.71	ribosomal protein S7	[more]
ATCG00900.1	5.8e-80	98.71	Ribosomal protein S7p/S5e family protein	[more]
AT2G07696.1	8.0e-13	32.14	Ribosomal protein S7p/S5e family protein	[more]
ATMG01270.1	8.0e-13	32.14	mitochondrial ribosomal protein S7	[more]
AT2G37270.1	5.9e-08	35.29	ribosomal protein 5B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 1..155 e-value: 5.2E-60 score: 203.5
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 2..149
IPR000235	Ribosomal protein S5/S7	PIRSF	PIRSF002122	RPS7p_RPS7a_RPS5e_RPS7o	coord: 3..155 e-value: 7.0E-55 score: 184.1
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 1..155
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 1..149 e-value: 1.7E-52 score: 177.0
IPR005717	Ribosomal protein S7, bacterial/organellar-type	TIGRFAM	TIGR01029	TIGR01029	coord: 3..155 e-value: 9.5E-63 score: 208.7
IPR005717	Ribosomal protein S7, bacterial/organellar-type	HAMAP	MF_00480_B	Ribosomal_S7_B	coord: 1..155 score: 30.690334
None	No IPR available	PANTHER	PTHR11205:SF44	30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC	coord: 1..155
None	No IPR available	CDD	cd14871	uS7_Chloroplast	coord: 10..154 e-value: 1.38081E-86 score: 247.959
IPR020606	Ribosomal protein S7, conserved site	PROSITE	PS00052	RIBOSOMAL_S7	coord: 20..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015483.1	HG10015483.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding