HG10015414 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015414
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein CRABS CLAW
Location	Chr02: 26451589 .. 26454021 (+)
RNA-Seq Expression	HG10015414
Synteny	HG10015414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAACTCTGAAGATAAATCTTCCATGGATTTGGTTCAACCTTCTGACCACCTCTGTTATGTCAAATGCAACTTCTGCAACACTGTTCTTGCGGTAATAATTTTACTTTTTTTTCTTCTTTTTTTTTTCATACTCTTTTACTTCGTCCTACAATGTTGATATAATATTAAATTCATATCATAATCTTAAAGTTTTTTTTAGTCCATCTATAATTCAACTTAGTACTAAGATATATGTTTCCATATATTAATTATATATATATTACTTAAAGAAACAACTTATCAAACACTTCCAAAACTATTTTGATGATCACATGATAGGCAAAATTTTATGTTTGCATATATTGTTTATAGTTAAGAACAATGATTAAAACATCGATATCGAGATATCAATTTTATGGATGTATTGATAAAATATTGATATCGATGAATATTTTTATAAGTAAGAAATTTATAAGGGTGTTATGAATATCTGGTTTATTTGGGTTTGATTCTGGTTAAAAAAAAAAATTATAAAAATTATTTAGATTTATATTTAAGTTATTTTTACTAGTTGAAACTAAGTTATATATGGATGTTGTTATTAGTATTTCGATTCATTATTTGGTTAAATCAATAGTTTTTTATGTTTATAAATATTGTTTATGGTTAATATCAATGATTAAAATATCGATATCAAAATTATAAGGGTACTATGGATATCTTGCTCATTTGGGTTTAATTATTATTAAAAAAAAATTATAAAAATTATTTAGATTTATATAGATGTTGTTATTAGTATTTCTATTCATTATTTGGTTAAATAAATGATTTTTTTTTAATGTTTTACGAATATTTATACAAAAGATATTAGCGATATTAATGGATCTTTAATATTGATGTTGAACGGTTATATTTATGGATTGTTAATTAATAATTTTTGTTTATGACTTTGTTGGATTTGGAAGGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACAGTGAAATGTGGTCATTGTAGTAATCTTTCATTTTTAAGCACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTAAATTTTCAGGTGAAATTAATTAAGTGAATGTATATTTATATTAATTAAAATGAATTTTCTAATATGGTCAACTAATTAATTAAGGAGATTCATTTTCTTTACAAAGGAAAAAAATATATTAATATTGTAATTAATTATAGTACAACCAGTCTCAGGTTGGGTTCTCCAATGATATTCGAAAGGGTGCATCCACATCGTCGAGTTCCACGTCCTCTTCAATGGCAAATGAGTCCCCTTCTCTAAATTTTGTTGTTAAACGTATGTTTCATTCTTCATCATGGTAAACAATTAAGGTTTCGTTTGATAATTATTATTATTATTTTTTACTTGAACTCCTAATCAAATTGTAAAATCAAAAATAAATTTTTAAAAACTACTACTATGACTTGATTTTTTAAAACACCAATAAAAAGTAGATGATAAAATATAGAAACTTTTAGGTTGAAGTTGTTTATAATAAACTTAATTTTCAAAAACCAAAAGCTTAAAACTAAGACTCCAATTTGACAACCATTTAGTTTTTTTCACACCATTTCTTAATTATGATTTTCAAGTTTTTTTTATGTTAACATTTGAATGTTAAGCCAAATTTCAAATATATATATATATAAACTGGTACTTTTTGTTTTCATAACGTGACTTGAACCTTAACATCATTCCTAAAAGGTATAAATTAATAGATGGAAATGATATTTAATTAATAGACAAACCAAGTAATTACAAAATAAAGTCTAATTGATTATCAAATGAGATTTTAATTTATCATAACTTATCATATTTGGGTCCTAGTAGCTATTAATAATCACATTTGAAATCAACTTAAATTATTAAGGTATTGTTTGATAATCACATTTGAAATCAACTTAAATTATTAAGGTATTGTTTGATAATCACATTCATAATTTTTTATTTTTGAAAATTGTGCTTATTTGTTTAACAATTTAGGTGAAAATAGTATTTCTAATCTTACTTTAAGAAAATCAAATAATTATTAAACGAGTGACCATCGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCCATCTTATTTATTTATTTATTTTTTGCAGCCCCTGAGAAGAAACATAGACTGCCATCTGCTTACAATCGTTTCATGAAGTAAGAATACAGTTACAGTTGATTAATCAGAAAAGGAATATAAATTTTTTTTGATAGTTTTCAAAAATTGAAACTTTATTACATTAAATGTTAGAGAGGAGATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTCAGTGCAGCAGCAAAAAACGTAATCAACCTTTTTTATTTCCCTTCTTTTTTAATTTCTGTATTCTTTTCTTATATTTCCAAGTCAAATTAA

mRNA sequence

ATGAGCAACTCTGAAGATAAATCTTCCATGGATTTGGTTCAACCTTCTGACCACCTCTGTTATGTCAAATGCAACTTCTGCAACACTGTTCTTGCGTACAACCAGTCTCAGGTTGGGTTCTCCAATGATATTCGAAAGGGTGCATCCACATCGTCGAGTTCCACGTCCTCTTCAATGGCAAATGAGTCCCCTTCTCTAAATTTTGTTGTTAAACCCCCTGAGAAGAAACATAGACTGCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTCAGTGCAGCAGCAAAAAACGTAATCAACCTTTTTTATTTCCCTTCTTTTTTAATTTCTGTATTCTTTTCTTATATTTCCAAGTCAAATTAA

Coding sequence (CDS)

ATGAGCAACTCTGAAGATAAATCTTCCATGGATTTGGTTCAACCTTCTGACCACCTCTGTTATGTCAAATGCAACTTCTGCAACACTGTTCTTGCGTACAACCAGTCTCAGGTTGGGTTCTCCAATGATATTCGAAAGGGTGCATCCACATCGTCGAGTTCCACGTCCTCTTCAATGGCAAATGAGTCCCCTTCTCTAAATTTTGTTGTTAAACCCCCTGAGAAGAAACATAGACTGCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTCAGTGCAGCAGCAAAAAACGTAATCAACCTTTTTTATTTCCCTTCTTTTTTAATTTCTGTATTCTTTTCTTATATTTCCAAGTCAAATTAA

Protein sequence

MSNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYNQSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNVINLFYFPSFLISVFFSYISKSN

Homology

[Close]

BLAST of HG10015414 vs. NCBI nr
Match: KAG7013095.1 (Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.7 bits (478), Expect = 3.2e-44
Identity = 106/153 (69.28%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN-------------------------- 60
           + +SEDKSSMDLVQPSDHLCYVKCNFCNTVLA                            
Sbjct: 44  LMSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 103

Query: 61  --------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLP 114
                         QSQVGFSNDIRKGASTSSSS+SSSMANESPS NFVVKPPEKKHRLP
Sbjct: 104 PPLQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLP 163

[Close]

BLAST of HG10015414 vs. NCBI nr
Match: XP_022944998.1 (protein CRABS CLAW [Cucurbita moschata])

HSP 1 Score: 188.3 bits (477), Expect = 4.2e-44
Identity = 106/151 (70.20%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN---------------------------- 62
           +SEDKSSMDLVQPSDHLCYVKCNFCNTVLA                              
Sbjct: 2   SSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  ------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSA 114
                       QSQVGFSNDIRKGASTSSSS+SSSMANESPS NFVVKPPEKKHRLPSA
Sbjct: 62  LQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPSA 121

[Close]

BLAST of HG10015414 vs. NCBI nr
Match: XP_038893343.1 (protein CRABS CLAW isoform X1 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 104/152 (68.42%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN--------------------------- 61
           SNS+DKSSMDLVQPS+HLCYVKCNFCNTVLA                             
Sbjct: 4   SNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 63

Query: 62  -------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPS 114
                        QSQVGFSNDIRKGASTSS+STSSS+ NESPS NFVVKPPEKKHRLPS
Sbjct: 64  PLQGQCIDHPLSFQSQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPS 123

[Close]

BLAST of HG10015414 vs. NCBI nr
Match: XP_023542830.1 (protein CRABS CLAW [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 105/151 (69.54%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN---------------------------- 62
           +SEDKSSMDLVQPSDHLCYVKCNFCNTVLA                              
Sbjct: 2   SSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  ------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSA 114
                       QSQVGFS DIRKGASTSSSS+SSSMANESPS NFVVKPPEKKHRLPSA
Sbjct: 62  LQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPSA 121

[Close]

BLAST of HG10015414 vs. NCBI nr
Match: XP_038893344.1 (protein CRABS CLAW isoform X2 [Benincasa hispida])

HSP 1 Score: 182.6 bits (462), Expect = 2.3e-42
Identity = 102/150 (68.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN--------------------------- 61
           SNS+DKSSMDLVQPS+HLCYVKCNFCNTVLA                             
Sbjct: 4   SNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 63

Query: 62  -----------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSAY 114
                        QVGFSNDIRKGASTSS+STSSS+ NESPS NFVVKPPEKKHRLPSAY
Sbjct: 64  PLQGQCIDHPLSFQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPSAY 123

[Close]

BLAST of HG10015414 vs. ExPASy Swiss-Prot
Match: Q8L925 (Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-24
Identity = 72/151 (47.68%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPS---DHLCYVKCNFCNTVLAYN------------------------- 62
           N E+K +M   + S   +HL YV+C+ CNT+LA                           
Sbjct: 2   NLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTT 61

Query: 63  ------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSA 114
                       Q Q    +D +KG+S+SSSS++SS    SPS  FVVKPPEKK RLPSA
Sbjct: 62  TPPLQGHVSLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPSA 121

[Close]

BLAST of HG10015414 vs. ExPASy Swiss-Prot
Match: Q76EJ0 (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.6e-23
Identity = 69/142 (48.59%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 10  MDLVQPSDHLCYVKCNFCNTVLAYN----------QSQVGFSNDIR-------------- 69
           MDLV PS+HLCYV+C +CNTVLA              + G  N++               
Sbjct: 1   MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSP 60

Query: 70  --------KGASTSSSSTS-----SSMANE-SPSLNFVVKPPEKKHRLPSAYNRFMKEEI 114
                   +G  T           S  +NE SP   FVVKPPEKKHRLPSAYNRFM+EEI
Sbjct: 61  TDHPLGPFQGPCTDCRRNQPLPLVSPTSNEGSPRAPFVVKPPEKKHRLPSAYNRFMREEI 120

[Close]

BLAST of HG10015414 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-18
Identity = 66/171 (38.60%), Postives = 81/171 (47.37%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN--------------------------- 61
           S S    S D   PSDHLCYV+CNFC T+LA N                           
Sbjct: 8   SPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRS 67

Query: 62  ---------QSQVG-----FSNDIRKGASTSSSSTSSSMANESPSLNF------------ 114
                    Q Q+G        DI +    + S+ +  M N+ P++N             
Sbjct: 68  YVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE 127

[Close]

BLAST of HG10015414 vs. ExPASy Swiss-Prot
Match: Q7XIM7 (Protein YABBY 1 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-15
Identity = 58/144 (40.28%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 16  SDHLCYVKCNFCNTVLAYN-----------------------------------QSQV-- 75
           S+H+CYV CN+CNT+L  N                                     QV  
Sbjct: 7   SEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQN 66

Query: 76  -GF--SNDIRKGASTSSSSTSSSMANESPSLNFV--VKPPEKKHRLPSAYNRFMKEEIQR 118
            GF  +N      ++ +  TS++M     S   V  ++PPEK+ R+PSAYNRF+KEEIQR
Sbjct: 67  RGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQR 126

[Close]

BLAST of HG10015414 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-14
Identity = 56/144 (38.89%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 16  SDHLCYVKCNFCNTVLA-------------------------------YNQSQVGFSNDI 75
           S+ +CYV C+FC T+LA                               +  S      D+
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDL 66

Query: 76  ------------RKGASTSSSST---SSSMANESPSLNFVVKPPEKKHRLPSAYNRFMKE 114
                       RK  ++SS ST   S ++  E+P +   ++PPEK+ R+PSAYNRF+KE
Sbjct: 67  QPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMP-PIRPPEKRQRVPSAYNRFIKE 126

[Close]

BLAST of HG10015414 vs. ExPASy TrEMBL
Match: A0A6J1FZK6 (protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 106/151 (70.20%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN---------------------------- 62
           +SEDKSSMDLVQPSDHLCYVKCNFCNTVLA                              
Sbjct: 2   SSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  ------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSA 114
                       QSQVGFSNDIRKGASTSSSS+SSSMANESPS NFVVKPPEKKHRLPSA
Sbjct: 62  LQGQCIDHPLSFQSQVGFSNDIRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRLPSA 121

[Close]

BLAST of HG10015414 vs. ExPASy TrEMBL
Match: A0A6J1D6X3 (protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.5e-42
Identity = 100/153 (65.36%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN-------------------------- 60
           MS+ + K+SMDLVQPS+HLCYV+CNFCNTVLA                            
Sbjct: 1   MSSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 60

Query: 61  --------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLP 114
                         Q+QVGFSNDIRKGASTSS+STSSSMANESPS +FVVKPPEKKHRLP
Sbjct: 61  PPLQGQCIDHPLGFQTQVGFSNDIRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRLP 120

[Close]

BLAST of HG10015414 vs. ExPASy TrEMBL
Match: A0A6J1HVT7 (protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.1e-41
Identity = 103/154 (66.88%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN---------------------------- 62
           +SEDK+SMDLVQPS+HLCYVKCNFCNTVLA                              
Sbjct: 2   SSEDKASMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPP 61

Query: 63  ------------QSQVGFSNDIRKGAST---SSSSTSSSMANESPSLNFVVKPPEKKHRL 114
                       QSQVGFSN+IRKGAST   SSSS+SSSMANESPS NFVVKPPEKKHRL
Sbjct: 62  LQGQCIDHPLSFQSQVGFSNNIRKGASTSSSSSSSSSSSMANESPSANFVVKPPEKKHRL 121

[Close]

BLAST of HG10015414 vs. ExPASy TrEMBL
Match: A0A6J1ITA5 (protein CRABS CLAW-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478451 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 97/154 (62.99%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN-------------------------- 60
           M +SEDKSSMDLVQP+DHLCYVKCNFCNT+LA                            
Sbjct: 1   MGSSEDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTI 60

Query: 61  ---------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRL 114
                          Q QVGFSND RKGAS SS+S+SSSM NE PS +FVVKPPEKKHRL
Sbjct: 61  PPLQGQCIDHHPLTFQPQVGFSNDTRKGASISSTSSSSSMPNEPPSPSFVVKPPEKKHRL 120

[Close]

BLAST of HG10015414 vs. ExPASy TrEMBL
Match: A0A6J1IU64 (protein CRABS CLAW-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478451 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 97/154 (62.99%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 1   MSNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN-------------------------- 60
           M +SEDKSSMDLVQP+DHLCYVKCNFCNT+LA                            
Sbjct: 1   MGSSEDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTI 60

Query: 61  ---------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRL 114
                          Q QVGFSND RKGAS SS+S+SSSM NE PS +FVVKPPEKKHRL
Sbjct: 61  PPLQGQCIDHHPLTFQPQVGFSNDTRKGASISSTSSSSSMPNEPPSPSFVVKPPEKKHRL 120

[Close]

BLAST of HG10015414 vs. TAIR 10
Match: AT1G69180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 72/151 (47.68%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 3   NSEDKSSMDLVQPS---DHLCYVKCNFCNTVLAYN------------------------- 62
           N E+K +M   + S   +HL YV+C+ CNT+LA                           
Sbjct: 2   NLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTT 61

Query: 63  ------------QSQVGFSNDIRKGASTSSSSTSSSMANESPSLNFVVKPPEKKHRLPSA 114
                       Q Q    +D +KG+S+SSSS++SS    SPS  FVVKPPEKK RLPSA
Sbjct: 62  TPPLQGHVSLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPSA 121

[Close]

BLAST of HG10015414 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19
Identity = 66/171 (38.60%), Postives = 81/171 (47.37%), Query Frame = 0


Query: 2   SNSEDKSSMDLVQPSDHLCYVKCNFCNTVLAYN--------------------------- 61
           S S    S D   PSDHLCYV+CNFC T+LA N                           
Sbjct: 8   SPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRS 67

Query: 62  ---------QSQVG-----FSNDIRKGASTSSSSTSSSMANESPSLNF------------ 114
                    Q Q+G        DI +    + S+ +  M N+ P++N             
Sbjct: 68  YVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE 127

[Close]

BLAST of HG10015414 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 56/144 (38.89%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 16  SDHLCYVKCNFCNTVLA-------------------------------YNQSQVGFSNDI 75
           S+ +CYV C+FC T+LA                               +  S      D+
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDL 66

Query: 76  ------------RKGASTSSSST---SSSMANESPSLNFVVKPPEKKHRLPSAYNRFMKE 114
                       RK  ++SS ST   S ++  E+P +   ++PPEK+ R+PSAYNRF+KE
Sbjct: 67  QPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMP-PIRPPEKRQRVPSAYNRFIKE 126

[Close]

BLAST of HG10015414 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 13  VQPSDHLCYVKCNFCNTVLAYNQ--SQVGFSNDIRKGASTSSSSTSSSMANESPS----- 72
           V  ++ LCY+ CNFCN +LA N   S +     +R G  T+  S + + A +S S     
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ 64

Query: 73  -LNFVV-----------------------------KPPEKKHRLPSAYNRFMKEEIQRIK 114
             N+ V                             +PPEK+ R+PSAYN+F+KEEIQRIK
Sbjct: 65  ATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIK 124

[Close]

BLAST of HG10015414 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 13  VQPSDHLCYVKCNFCNTVLAYNQ--SQVGFSNDIRKGASTSSSSTSSSMANESPS----- 72
           V  ++ LCY+ CNFCN +LA N   S +     +R G  T+  S + + A +S S     
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ 64

Query: 73  -LNFVV-----------------------------KPPEKKHRLPSAYNRFMKEEIQRIK 114
             N+ V                             +PPEK+ R+PSAYN+F+KEEIQRIK
Sbjct: 65  ATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIK 124

The following BLAST results are available for this feature:

BLAST of HG10015414 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013095.1	3.2e-44	69.28	Protein CRABS CLAW, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944998.1	4.2e-44	70.20	protein CRABS CLAW [Cucurbita moschata]	[more]
XP_038893343.1	2.1e-43	68.42	protein CRABS CLAW isoform X1 [Benincasa hispida]	[more]
XP_023542830.1	2.1e-43	69.54	protein CRABS CLAW [Cucurbita pepo subsp. pepo]	[more]
XP_038893344.1	2.3e-42	68.00	protein CRABS CLAW isoform X2 [Benincasa hispida]	[more]

BLAST of HG10015414 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L925	1.7e-24	47.68	Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2	[more]
Q76EJ0	5.6e-23	48.59	Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1	[more]
O22152	4.1e-18	38.60	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q7XIM7	5.6e-15	40.28	Protein YABBY 1 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB1 PE=2 SV=1	[more]
Q9XFB0	1.6e-14	38.89	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]

BLAST of HG10015414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZK6	2.0e-44	70.20	protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1	[more]
A0A6J1D6X3	9.5e-42	65.36	protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1	[more]
A0A6J1HVT7	2.1e-41	66.88	protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1	[more]
A0A6J1ITA5	4.4e-39	62.99	protein CRABS CLAW-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478451 P...	[more]
A0A6J1IU64	4.4e-39	62.99	protein CRABS CLAW-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478451 P...	[more]

BLAST of HG10015414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69180.1	1.2e-25	47.68	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	2.9e-19	38.60	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	1.2e-15	38.89	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.5e-15	39.86	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.5e-15	39.86	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 57..114 e-value: 3.5E-5 score: 26.0
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 65..111
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 48..114 e-value: 2.2E-27 score: 96.7
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 8..32
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 40..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..65
None	No IPR available	PANTHER	PTHR31675:SF1	PROTEIN CRABS CLAW	coord: 40..115
None	No IPR available	PANTHER	PTHR31675:SF1	PROTEIN CRABS CLAW	coord: 8..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015414.1	HG10015414.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0007275	multicellular organism development