HG10015382 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015382
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Eukaryotic translation initiation factor 5A
Location	Chr02: 26221164 .. 26223262 (-)
RNA-Seq Expression	HG10015382
Synteny	HG10015382

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGACCTTGCAAGGTTCTTAATAGTTTTCATTCTGATTTCTCAATTCTCCCTCATCCGTTCGCCCATTCTTATTTAACATGATACCTATTCGTTCAATACTCTGCTTCAATTTTCCTCTTCTTGTTGCGTTAAGTATGTACTTTTTTCAAGGGCTTTCCTTTCCTTTTATCCCATCTTGTTCTCTGGTTTGTGTTAATTGTGTTTCTGTGATTTTTTGCACGGACTTTTTCCACTCTTCTGCCTTTTAATTATGTTTGTCTTCTGATTTTACTTCTAGATGTTGTCGTCCATGTAGTTTATGGCATGTTTGGGAGTGATTCGAAAAATCATTGGAAAAGTGTTTTTAATCTTTCTAAATCAATTTTAATAGTATAAAAATGCATTTAAAAACCATTGAATTGATTTTGATGGATTAAAATTGTGTTTTGGAGTAATTTTAAATATGACAAAAAGAAATAACTCCTAAACATGCATTTAGTTTTCTTGATCAAATTTCTTTTGGGATCAAATTGAATTGACGGACATTCTAGTAAAAGCTAAAATGAAAGTAATGAGTTGCTTGAAGCTATATCATATTTTGTTCTGTTGCTTTCTAGGGTTTTTACCTTTGGTGGTTTCAGTATAATTTGATTACGTTATATATTGGTTTTCCAATTGACAATCTTGACCTAAGGCTTATGCATTAACGTTTGTAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATTGTCCCCTCTTCACATAATTGTGATGTATGAATTCTTTTCTCCCCTTCTATTTCATACTTTTCTTAGCAAGTTGTAGGTTTGTTTGTGATTTCTGATTTTTGCATTCATGAAACACAGGTTCCTCATGTCAGTCGCACTGACTATCAGCTCATTGATATCTCTGAGGATGGATTTGTATGATAAAATTCTCTTTGTTTACATCTTATATCAGTTACCCCTGGTTGTTCATGTATAGTACTGTGGCTAACCCTAATTTCAATGAAAACTTATCAGATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACCGATGACAGTCTGCTGTCCCAGGTAATATTTTCTTTTTGGCTGTTGAAATCTCTGTGCTGTTGTGTTCTATTGGCCTTGATGGCTTGGTAGACCTCATTGCTTGTTACAATGAAACTATTTCTTCCTCCGCTCCTTGAAGTATACTAGAGTTCAATACTGATTCTGGGATTATTAGGACTTATGAGTGTGATGGTTTTCTGTTTTTATATAATTTCCCCCTTCCTCTATTATGCGTATGTTTTTCATGAATATGGGTTTGAATTTCTTGCAAAATGTGGACATGTGGTTTATAAGTGTTTGAAGAAGGGTTTAAATAGCAGTGTTTTTTTTTTTTTTTTAAATCATGAAATGCTAAAGCGGTGTTTGAATTGCGGATGTATAGTCTTTTTATGGTTAAGGAACAAGCATTTAATATTAGTTTGTTGATAGAAAAGGATCCCAAACCGATCATACTTAGATTGTATTATTCTTTAGTTTTACTATGAAGGGCAAATAGAATTAAATTAGTGTCTATTTCTTGTGCACAAGAGACTAATCCACAGGCCCTGTTAAATAGTTAGTTGATAAATAATGATATGTTGATCTACATGTTTCTCCCTCTTTGCAGCGTGGGGTCTTATTGTGTGATCACTAGCTTTAACAGATATTACTTCCATTTTTTTGGTTACTTTCTATTTGGCTGGCAATCTATAAATATATTCCATGCAAAGCTATGAGCGGCATAGTTCTTAAGATTGATCGTCTTGTTCCATGTGTTGCTTGCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGTGAGGAGCAAATCTGTGCTCTCAAGGACATCGGCCCAAAATAG

mRNA sequence

ATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATTGTCCCCTCTTCACATAATTGTGATGTTCCTCATGTCAGTCGCACTGACTATCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACCGATGACAGTCTGCTGTCCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGTGAGGAGCAAATCTGTGCTCTCAAGGACATCGGCCCAAAATAG

Coding sequence (CDS)

ATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATTGTCCCCTCTTCACATAATTGTGATGTTCCTCATGTCAGTCGCACTGACTATCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACCGATGACAGTCTGCTGTCCCAGATCAAGGATGGATTTGCTGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGTGAGGAGCAAATCTGTGCTCTCAAGGACATCGGCCCAAAATAG

Protein sequence

MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTDDSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK

Homology

[Close]

BLAST of HG10015382 vs. NCBI nr
Match: XP_038893432.1 (eukaryotic translation initiation factor 5A-4 [Benincasa hispida])

HSP 1 Score: 323.6 bits (828), Expect = 9.9e-85
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           +SLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. NCBI nr
Match: XP_008446407.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034452.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa] >TYK17682.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa])

HSP 1 Score: 322.0 bits (824), Expect = 2.9e-84
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D+LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. NCBI nr
Match: XP_004135157.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypothetical protein Csa_009020 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 8.3e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. NCBI nr
Match: XP_022151244.1 (eukaryotic translation initiation factor 5A-4-like [Momordica charantia])

HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTTKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           +SLLSQIKDGF EGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFNEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. NCBI nr
Match: XP_015943065.1 (eukaryotic translation initiation factor 5A-2 [Arachis duranensis] >XP_016193057.1 eukaryotic translation initiation factor 5A-2 [Arachis ipaensis] >XP_025617783.1 eukaryotic translation initiation factor 5A-2 [Arachis hypogaea] >XP_025629380.1 eukaryotic translation initiation factor 5A-2 [Arachis hypogaea] >QHO20641.1 Eukaryotic translation initiation factor [Arachis hypogaea] >QHO51588.1 Eukaryotic translation initiation factor [Arachis hypogaea] >RYR31846.1 hypothetical protein Ahy_B01g056772 [Arachis hypogaea])

HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           DSLLSQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-82
Identity = 146/159 (91.82%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D+LL+QIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy Swiss-Prot
Match: P56336 (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-82
Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+GNTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           DSLLSQIKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-81
Identity = 143/159 (89.94%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LLSQIKDGFAEGKDL+V+VMS+MGEE+IC+LKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy Swiss-Prot
Match: Q9AXQ4 (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-81
Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+GNTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LLS IKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 ENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy Swiss-Prot
Match: Q945F4 (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.3e-81
Identity = 143/159 (89.94%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDL+LPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           DSLL+QIKDGFA+GKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy TrEMBL
Match: A0A5D3D1G5 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00070 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D+LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy TrEMBL
Match: A0A1S3BFT8 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489162 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D+LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy TrEMBL
Match: A0A0A0KU59 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G606480 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.0e-84
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy TrEMBL
Match: A0A6J1DCF3 (Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LOC111019214 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTTKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           +SLLSQIKDGF EGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFNEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. ExPASy TrEMBL
Match: A0A445AZP6 (Eukaryotic translation initiation factor 5A OS=Arachis hypogaea OX=3818 GN=Ahy_B01g056772 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++GNTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           DSLLSQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of HG10015382 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-77
Identity = 138/159 (86.79%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT+KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG++SLLTD+G+TKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           D+LL QIK GF +GKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of HG10015382 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-76
Identity = 132/159 (83.02%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFT+KKLEDIVPSSHNCDVPHV+R DYQLIDISEDGF+SLLTD+G+TKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 160
           ++LL+Q+K+GF EGKD++V+VMS+MGEEQ+CALK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of HG10015382 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 268.1 bits (684), Expect = 4.6e-72
Identity = 126/157 (80.25%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDGF+SLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 DSLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIG 158
           D L +Q++ GF EGKD++V+VMSSMGEEQICA+K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of HG10015382 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-58
Identity = 105/127 (82.68%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120
           V IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDGF+SLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 DSLLSQI 128
           D L +Q+
Sbjct: 121 DGLTAQL 126

The following BLAST results are available for this feature:

BLAST of HG10015382 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893432.1	9.9e-85	99.37	eukaryotic translation initiation factor 5A-4 [Benincasa hispida]	[more]
XP_008446407.1	2.9e-84	98.74	PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034...	[more]
XP_004135157.1	8.3e-84	98.11	eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypo...	[more]
XP_022151244.1	5.4e-83	97.48	eukaryotic translation initiation factor 5A-4-like [Momordica charantia]	[more]
XP_015943065.1	5.4e-83	95.60	eukaryotic translation initiation factor 5A-2 [Arachis duranensis] >XP_016193057...	[more]

BLAST of HG10015382 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24922	1.6e-82	91.82	Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40...	[more]
P56336	2.8e-82	93.08	Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EI...	[more]
Q9AXJ4	1.1e-81	89.94	Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV...	[more]
Q9AXQ4	3.1e-81	91.82	Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE...	[more]
Q945F4	5.3e-81	89.94	Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV...	[more]

BLAST of HG10015382 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1G5	1.4e-84	98.74	Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BFT8	1.4e-84	98.74	Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489...	[more]
A0A0A0KU59	4.0e-84	98.11	Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A6J1DCF3	2.6e-83	97.48	Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A445AZP6	2.6e-83	95.60	Eukaryotic translation initiation factor 5A OS=Arachis hypogaea OX=3818 GN=Ahy_B...	[more]

BLAST of HG10015382 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13950.1	1.2e-77	86.79	eukaryotic elongation factor 5A-1	[more]
AT1G69410.1	1.1e-76	83.02	eukaryotic elongation factor 5A-3	[more]
AT1G26630.1	4.6e-72	80.25	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]
AT1G26630.2	1.7e-58	82.68	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 85..154 e-value: 1.6E-32 score: 124.1
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 85..154 e-value: 2.2E-28 score: 98.1
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..85 e-value: 1.5E-43 score: 148.5
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 17..153 e-value: 8.2E-41 score: 136.9
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 1..157 e-value: 2.4E-66 score: 220.0
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	coord: 1..156
None	No IPR available	GENE3D	2.40.50.140		coord: 86..158 e-value: 1.4E-33 score: 116.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11673:SF42	BNAA07G09420D PROTEIN	coord: 1..156
None	No IPR available	CDD	cd04468	S1_eIF5A	coord: 86..156 e-value: 1.43862E-30 score: 103.771
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 50..57
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 15..93
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 86..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015382.1	HG10015382.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding