HG10015380 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015380
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr02: 26208261 .. 26209876 (-)
RNA-Seq Expression	HG10015380
Synteny	HG10015380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTGAGACTCAAATACCATTCTACGTCTTAATTTTTATCTAAAATTCTCTAAGATTTATACCAAATGATAATCTTGAAATATTATCAAACGTTGAAATAATATTGTAGATTTATAAATAATGGAGATATTTTATAAACAAATGATAATATTCATAATTATTTTTTTTTGAAAAAAATAAGTTTTTTATTGGAGAATTTTTAGAAATAGAAAAATAAGAGAAACTATTTACACAAAATAACAAAAACTTTAGATAGTTGTGATAGGCTTATAGACGTCTATCATGGTCTACCAGTGATAGAAATGGTAGAAATATATTAATGTCTTTTTTTGTTATTTTCTGTAAATAGTTTAACATTTTTTCTATATGTAAAAATTTCCCTTTTTTATTCTTAAGTTTTGAGTCTAGTTTTATTTATTCCAAAATGTTACAATTTTATGCATGATATTTGAGTTTTGAGTCTAGTTTAAGCTCGATCTTTTATTAAATATTCACTTTCAATTTTTAGTGTTAATGTCTATTAATTAATTAAAAAAAAAAACGTAAGTTTCAATATTAAAATTAATTTTAAAATTTTATTTTATACTTATTTTAAATTAAACAATCTTGAAAAATTATCAAACGTGGAAGATAACATCACAACATTGAGAATAATAGAGATATTTTATAAACAAACGATAAAGTTCATAATTATACTTTTTTAATTATTTAGCCTAATTATATAGACTTTTTTTTCCTTTTCTTTACATGGAGCCCAATGTCTGACAACAAAATGCCAAAATTCATTTCCAAAACTTTGCTTTTTTTTTTTTCCCTTCCAAAAGAAAAAAGGGCTAAAATTAGTCACTAAACTCACTGCACTAAACTACACCACAATTCAGAGAGCCATTGTCCCACATCTCACGTTTCCTTTATTGTAATGTCATTCTCTAGCTTTGGAATTTATTCAAGTTCAAGTTTTGTTCGTTAAGCTCACTTGTTTATCAAGTTCATTTCTTTGGAATTTCATCACCCATATAAGATTTTACTTCAAAAAAGGTGTGGGAAGTTTAAAATCAAGACCCAAAGACAGAATTTTAACTTAAAAAGCTTGAAGTTTTGCCAAATCAATATAGTATTCACTGTGTTCTACTTGTACTTTCTTGTTTTTGCATATAATTTCAAAAGAAAAATGAAGGAACAGAATGGAATTGAGATGGGTGTCGAATCGTTTTCTAGGTACCAACTACCAATTCAATACGAAAGGACAGATTCGAAATGGAAAAGCAGAAGAACATTTAATGGAGTAGTGGAGTGATTTAATGTTTGGTTCAATTCAATTGGCTTCAAAATAGTGAAAGTAACAGCAGCTAAGAGGTGTTTGGGCTTTTAGGCCTAAGGGTAAGGGGGTCCAATTTCTATAGTCTACTTTGTTTGTTTTGTTGGTCGAAAGAGAGAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGCCAGAAAGGGAAATGGGGTTTGTTATTTGAGCGATTTAGAAAACGAGAGCTATGAACATCAAGCCGTTGCATTGCAATTTGCAAATGGCAGTGGCTTCTCTTCTGTAACACATGATTTGCCCAGAGAAAAAGGGTAA

mRNA sequence

ATGAAAGAGAGAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGCCAGAAAGGGAAATGGGGTTTGTTATTTGAGCGATTTAGAAAACGAGAGCTATGAACATCAAGCCGTTGCATTGCAATTTGCAAATGGCAGTGGCTTCTCTTCTGTAACACATGATTTGCCCAGAGAAAAAGGGTAA

Coding sequence (CDS)

ATGAAAGAGAGAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGCCAGAAAGGGAAATGGGGTTTGTTATTTGAGCGATTTAGAAAACGAGAGCTATGAACATCAAGCCGTTGCATTGCAATTTGCAAATGGCAGTGGCTTCTCTTCTGTAACACATGATTTGCCCAGAGAAAAAGGGTAA

Protein sequence

MKEREEEEEEEDEEEEARKGNGVCYLSDLENESYEHQAVALQFANGSGFSSVTHDLPREKG

Homology

The following BLAST results are available for this feature:

BLAST of HG10015380 vs.


Match Name	E-value	Identity	Description

BLAST of HG10015380 vs.


Match Name	E-value	Identity	Description

BLAST of HG10015380 vs.


Match Name	E-value	Identity	Description

BLAST of HG10015380 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015380.1	HG10015380.1	mRNA