HG10015364 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015364
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CASP-like protein
Location	Chr02: 26093650 .. 26095061 (+)
RNA-Seq Expression	HG10015364
Synteny	HG10015364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGACAAAATCAGAGAGTGGAGATCAAGTTCCTTTGGGTTCAAAATTTAGCAACCCAATTGGAGAAGGAGGTCAGAGAGGGCTGGCCATAGTGGACTTAGTGCTGAGAGTAATGGCAGCCATGGCAACTCTGATTAGTGCAATAGTAATGGGAACAGCCAATCAAACTCTGCCATTTTCAACACAGTCTTCACAATTCAAAGCCAACTATAAAGATCTTCCTATGTTTATGTAAATTTTACATACACATGTGCATTCTGTTCTATACATACAAAATTTTGGTATAGCCTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATTTTACAGGTTCTTTGTGCTTGCAAATTCCATAGTTTGTGGGTATCTCTGCTTATCTCTTCCTCTATCCATCTTTCAAATCATGGGAGTTGTATCAGTCACTCCAAGGCTCATTTTGCTCATTTTTGACATGGTATTTTTTTTTTTTTTTTTTAATATTATAATGCTATTAATTTTGTCGTTTGTCTCTAAACTTTCAATTATATATCTTAGAATCTTGATATGTTCGAGATTTTATAAAGTTAAATGATTTATTGAATATAAATGGAAGTTTATGTATAATGGAACTCTAACGTTTCATTCTCATAACCATTTAGTTTTTTTTAACACTATTTTTACTTGTGAGTTTTTTTTAATTTAATTTCTAATAATATTTTCAAAATTCATGTCAAGTTTTAACAACTAAAAAAAGTTTAAAACTTGTTTTTGTTATTTGAATTTGGTAAAGAATTTAAATGGTAACATAGGAAAGATGAAGGCGGTTGAAATGAATTTGTAAGAAATTAAGCTCACTCTTCAAAATCCAAATAGTTATCAAATGAGATATAAACTTTCAATTAGATGTCTAATAAATCTGTTATTTTTTTTAAAAAAAAATAATAATATGAATAGGTGAAAACTTGTTAGATGGCATAAAGAAATTCATAAATTTATTGAACACAAAATTGAAAATTCAAACCTATTAAATACTTTTAAAGTTTAAAGTCTAAATAAGATACAGGTCTCAAAGTCATAGACTAAACTTAATAAATTTTTCTTTAATGGTAAAGAATTTGTGTATATCTTTTACCTTCAAGTGTTTGATGGTTCTATGTGGTGTTATTCAAATGAATGGAAGATGGCGATGACGCTTGCAACGGTTGGTGCTTCAGTGGCCGCGTCAGTGGTCTACTTGGCATATCGAGGCAATATTGCTGCCAACTGGGTTTCCTTCTGCACTCAATTTGACTCTTTTTGTCGACGTATATCTGGATCTTTGATTGGCTCTTTTGGTGCGGTTCTTGCTATAATGCTTCTACTTATTATTTCAATTATAGCCATCCTTCGACGCTCATCATAA

mRNA sequence

ATGGCAAAGACAAAATCAGAGAGTGGAGATCAAGTTCCTTTGGGTTCAAAATTTAGCAACCCAATTGGAGAAGGAGGTCAGAGAGGGCTGGCCATAGTGGACTTAGTGCTGAGAGTAATGGCAGCCATGGCAACTCTGATTAGTGCAATAGTAATGGGAACAGCCAATCAAACTCTGCCATTTTCAACACAGTCTTCACAATTCAAAGCCAACTATAAAGATCTTCCTATGTTTATGTTCTTTGTGCTTGCAAATTCCATAGTTTGTGGGTATCTCTGCTTATCTCTTCCTCTATCCATCTTTCAAATCATGGGAGTTGTATCAGTCACTCCAAGGCTCATTTTGCTCATTTTTGACATGATGGCGATGACGCTTGCAACGGTTGGTGCTTCAGTGGCCGCGTCAGTGGTCTACTTGGCATATCGAGGCAATATTGCTGCCAACTGGGTTTCCTTCTGCACTCAATTTGACTCTTTTTGTCGACGTATATCTGGATCTTTGATTGGCTCTTTTGGTGCGGTTCTTGCTATAATGCTTCTACTTATTATTTCAATTATAGCCATCCTTCGACGCTCATCATAA

Coding sequence (CDS)

ATGGCAAAGACAAAATCAGAGAGTGGAGATCAAGTTCCTTTGGGTTCAAAATTTAGCAACCCAATTGGAGAAGGAGGTCAGAGAGGGCTGGCCATAGTGGACTTAGTGCTGAGAGTAATGGCAGCCATGGCAACTCTGATTAGTGCAATAGTAATGGGAACAGCCAATCAAACTCTGCCATTTTCAACACAGTCTTCACAATTCAAAGCCAACTATAAAGATCTTCCTATGTTTATGTTCTTTGTGCTTGCAAATTCCATAGTTTGTGGGTATCTCTGCTTATCTCTTCCTCTATCCATCTTTCAAATCATGGGAGTTGTATCAGTCACTCCAAGGCTCATTTTGCTCATTTTTGACATGATGGCGATGACGCTTGCAACGGTTGGTGCTTCAGTGGCCGCGTCAGTGGTCTACTTGGCATATCGAGGCAATATTGCTGCCAACTGGGTTTCCTTCTGCACTCAATTTGACTCTTTTTGTCGACGTATATCTGGATCTTTGATTGGCTCTTTTGGTGCGGTTCTTGCTATAATGCTTCTACTTATTATTTCAATTATAGCCATCCTTCGACGCTCATCATAA

Protein sequence

MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILRRSS

Homology

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BLAST of HG10015364 vs. NCBI nr
Match: XP_038891857.1 (casparian strip membrane protein 1-like [Benincasa hispida])

HSP 1 Score: 305.8 bits (782), Expect = 2.6e-79
Identity = 168/193 (87.05%), Postives = 174/193 (90.16%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 60
           MAK KSESGDQVPLGSKFSNPIGEG QRGLAIVDLVLRVMA MATL SA+VMGTANQTLP
Sbjct: 1   MAKAKSESGDQVPLGSKFSNPIGEGAQRGLAIVDLVLRVMAIMATLSSAVVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 120
           FSTQSSQFKANYKDLPMFMFFVLANS+VCGYL LSLPLSIFQIM V SVTPRLILLIFDM
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVLANSLVCGYLFLSLPLSIFQIMEVASVTPRLILLIFDM 120

Query: 121 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 180
           MAM L T GAS AAS VYLAYRGN AANWVSFCTQFDSFCR ISGSLIGSF A+L  M L
Sbjct: 121 MAMVLGTAGASTAASTVYLAYRGNAAANWVSFCTQFDSFCRHISGSLIGSFVAILTFMFL 180

Query: 181 LIISIIAILRRSS 194
           +II +IA+LRRSS
Sbjct: 181 IIIYVIAMLRRSS 193

[Close]

BLAST of HG10015364 vs. NCBI nr
Match: XP_031742030.1 (casparian strip membrane protein 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 166/193 (86.01%), Postives = 175/193 (90.67%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 60
           M KTK+ESG+   LGSKF NPIGEG QRGLAIVDLV+RVMA MATL SAIVMGTANQTLP
Sbjct: 1   MGKTKTESGETQILGSKFENPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 120
           FSTQ+SQFKANYKDLPMFMFFVLANSIVCGYL LSLPLSIF IM V SVTPRLILLIFDM
Sbjct: 61  FSTQTSQFKANYKDLPMFMFFVLANSIVCGYLFLSLPLSIFHIMEVASVTPRLILLIFDM 120

Query: 121 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 180
           MAM LAT GAS AAS VYLAYRGN+AANWVSFCTQFDSFCRRISGSLIGSFGAV A MLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFGAVFAFMLL 180

Query: 181 LIISIIAILRRSS 194
           +IISI+A++RRSS
Sbjct: 181 IIISIVAMVRRSS 193

[Close]

BLAST of HG10015364 vs. NCBI nr
Match: XP_008446384.1 (PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >KAA0034436.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa] >TYK17698.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 294.3 bits (752), Expect = 7.8e-76
Identity = 161/193 (83.42%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 60
           M KTK+ESG+   LGSKF NPIGEG QRGLAIVDLV+RVMA MATL SAIVMGTANQTLP
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 120
           FSTQSSQFKANYKDLPMFMFFV+AN+IVCGYL LSLPLSIF +M V SVTPRLILLIFD 
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120

Query: 121 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 180
           MAM LAT GAS AAS VYLAYRGN+AANWVSFCTQFDSFCRRISGSLIGSF AV A MLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180

Query: 181 LIISIIAILRRSS 194
           +IIS++A++RRSS
Sbjct: 181 IIISVVAMVRRSS 193

[Close]

BLAST of HG10015364 vs. NCBI nr
Match: XP_022968095.1 (casparian strip membrane protein 3-like [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 3.7e-62
Identity = 141/192 (73.44%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGG-QRGLAIVDLVLRVMAAMATLISAIVMGTANQTL 60
           M ++K++S  +VPLGSK   P G GG QRGL IVDLVLRV+A MATL SAIVMGTA+QTL
Sbjct: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLTIVDLVLRVVALMATLCSAIVMGTAHQTL 62

Query: 61  PFSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFD 120
           PFSTQS+QFKA YKDLPMFMFFVL NS+ CGYL LSLPLSIFQ++ V SVTPRL LLIFD
Sbjct: 63  PFSTQSTQFKAVYKDLPMFMFFVLVNSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122

Query: 121 MMAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIML 180
            MAM L T GASVAASVVYLAY+GN   NW SFC+QFDSFCRR S SLIGSFGAVL ++L
Sbjct: 123 TMAMALETAGASVAASVVYLAYQGNTVVNWASFCSQFDSFCRRSSQSLIGSFGAVLVLVL 182

Query: 181 LLIISIIAILRR 192
           L+ +S IA+ RR
Sbjct: 183 LITLSAIAMSRR 194

[Close]

BLAST of HG10015364 vs. NCBI nr
Match: KAG7013128.1 (Casparian strip membrane protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 139/192 (72.40%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGG-QRGLAIVDLVLRVMAAMATLISAIVMGTANQTL 60
           M ++K++S  +VPLGSK   P G GG QRGL IVDLVLRV+A M TL SAIVMGTA+QTL
Sbjct: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLPIVDLVLRVVALMGTLCSAIVMGTASQTL 62

Query: 61  PFSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFD 120
           PFSTQS+QFKA YKDLPMFMFFVLANS+ CGYL LSLPLSIFQ++ V SVTPRL LLIFD
Sbjct: 63  PFSTQSTQFKAVYKDLPMFMFFVLANSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122

Query: 121 MMAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIML 180
            MAM L T GASVAASVVYLAY+GN   NW SFC+QF+SFCRR S SLIGSFGAVL ++L
Sbjct: 123 TMAMALVTAGASVAASVVYLAYQGNTVVNWASFCSQFNSFCRRSSQSLIGSFGAVLVLVL 182

Query: 181 LLIISIIAILRR 192
           ++ +S IA+ RR
Sbjct: 183 MITLSAIAMSRR 194

[Close]

BLAST of HG10015364 vs. ExPASy Swiss-Prot
Match: P0DI33 (Casparian strip membrane protein 1 OS=Panicum virgatum OX=38727 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44
Identity = 100/185 (54.05%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 7   ESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSS 66
           ESG+    G     P+  G  +GL+++DL+LR +A + TL SAI MGT N+TLPF TQ  
Sbjct: 3   ESGEH---GETSKAPLNRGVSKGLSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFI 62

Query: 67  QFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLA 126
           +FKA Y DLP   FFV+ANSIVC YL LSLPLSI  I+   +   RL+L+  D + + L 
Sbjct: 63  RFKAQYSDLPTLTFFVVANSIVCAYLILSLPLSIVHIIRSRAKFSRLLLIFLDAVMLALV 122

Query: 127 TVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISII 186
           T GAS AA++VYLA++GN+ ANW++ C QFDSFC RISGSLIGSFGA++ ++LL+++S I
Sbjct: 123 TAGASAAAAIVYLAHKGNVRANWLAICQQFDSFCERISGSLIGSFGAMVVLILLILLSAI 182

Query: 187 AILRR 192
           A+ RR
Sbjct: 183 ALARR 184

[Close]

BLAST of HG10015364 vs. ExPASy Swiss-Prot
Match: C5Z7E3 (Casparian strip membrane protein 3 OS=Sorghum bicolor OX=4558 GN=Sb10g008220 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-44
Identity = 97/172 (56.40%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 21  PIGEGG-QRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKDLPMFM 80
           P+G GG  +G++++DL+LR +A + TL SAI MGT N+TLPF TQ  +FKA Y DLP   
Sbjct: 15  PLGRGGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFIRFKAQYSDLPTLT 74

Query: 81  FFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAASVVYL 140
           FFV+ANSIVC YL LSLPLSI  I+   +   RL+L+  D   + L T GAS AA++VYL
Sbjct: 75  FFVVANSIVCAYLILSLPLSIVHIIRSRAKYSRLLLIFLDAAMLALVTAGASAAAAIVYL 134

Query: 141 AYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILRR 192
           A++GN+ ANW++ C QFDSFC RISGSLIGSFGA++ ++LL+++S IA+ RR
Sbjct: 135 AHKGNVRANWLAICQQFDSFCERISGSLIGSFGAMVMLILLILLSAIALARR 186

[Close]

BLAST of HG10015364 vs. ExPASy Swiss-Prot
Match: B6T959 (Casparian strip membrane protein 1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-43
Identity = 100/185 (54.05%), Postives = 132/185 (71.35%), Query Frame = 0


Query: 7   ESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSS 66
           E+  Q PLGS        G  +G++++DL+LR +A + TL SAI MGT N+TLPF TQ  
Sbjct: 9   ETSKQAPLGS------SRGVSKGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFI 68

Query: 67  QFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLA 126
           +FKA Y DLP   FFV+ANSIVC YL LSLPLSI  I+   +   RL+L++ D   + L 
Sbjct: 69  RFKAQYSDLPTLTFFVVANSIVCAYLTLSLPLSIVHIIRSRAKYSRLLLVVLDAAMLALV 128

Query: 127 TVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISII 186
           T GAS AA++VYLA++GN+ ANW++ C QFDSFC RISG LIGSFGA++ ++LLL++S I
Sbjct: 129 TPGASAAAAIVYLAHKGNVRANWLAICQQFDSFCERISGCLIGSFGAMVMLVLLLLLSAI 187

Query: 187 AILRR 192
           A+ RR
Sbjct: 189 ALARR 187

[Close]

BLAST of HG10015364 vs. ExPASy Swiss-Prot
Match: B9T4E6 (Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-42
Identity = 100/184 (54.35%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 10  DQVPLG-SKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQF 69
           D + LG +K S PIG G  RG++I+D +LR++A + TL SAI+MGT N+TLPF+TQ  +F
Sbjct: 4   DAIELGVAKDSTPIG-GANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFIRF 63

Query: 70  KANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATV 129
           +A Y DLP F FFV+AN +V GYL LSLPLSI  I+   +   R+IL+IFD   + L T 
Sbjct: 64  RAEYDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALLTA 123

Query: 130 GASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAI 189
           GAS AA++VYLA++GN  ANW + C QF+SFC RISGSLIGSF  V   +LL+++S  A+
Sbjct: 124 GASAAAAIVYLAHKGNTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSASAL 183

Query: 190 LRRS 193
            RR+
Sbjct: 184 SRRN 186

[Close]

BLAST of HG10015364 vs. ExPASy Swiss-Prot
Match: P0DI36 (Casparian strip membrane protein 3 OS=Brachypodium distachyon OX=15368 GN=Bradi1g45110 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-42
Identity = 94/177 (53.11%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 15  GSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKD 74
           G     P+ +G  RGL I+DL+ RV+A + TL SAI MGT NQT+PF TQ  QFK  Y D
Sbjct: 8   GETSKGPLSKGVSRGLCILDLIFRVIAVIGTLASAIAMGTTNQTMPFFTQFVQFKERYSD 67

Query: 75  LPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAA 134
           LP   FFV+ANSI   YL +SLPLSI  I+   +   RLIL+ FD+  + L T  AS  A
Sbjct: 68  LPTLTFFVVANSIASAYLIISLPLSIVHIIRSRAKYSRLILIFFDVAMLALVTAAASAGA 127

Query: 135 SVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILRR 192
           ++VYLA+ GN++ANW + C QFDSFC RISGSLIGSF A++ ++LL+++S +A+ RR
Sbjct: 128 AIVYLAHNGNVSANWFAICQQFDSFCERISGSLIGSFAAMVVLILLILLSAVALARR 184

[Close]

BLAST of HG10015364 vs. ExPASy TrEMBL
Match: A0A5A7SX44 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00250 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.8e-76
Identity = 161/193 (83.42%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 60
           M KTK+ESG+   LGSKF NPIGEG QRGLAIVDLV+RVMA MATL SAIVMGTANQTLP
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 120
           FSTQSSQFKANYKDLPMFMFFV+AN+IVCGYL LSLPLSIF +M V SVTPRLILLIFD 
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120

Query: 121 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 180
           MAM LAT GAS AAS VYLAYRGN+AANWVSFCTQFDSFCRRISGSLIGSF AV A MLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180

Query: 181 LIISIIAILRRSS 194
           +IIS++A++RRSS
Sbjct: 181 IIISVVAMVRRSS 193

[Close]

BLAST of HG10015364 vs. ExPASy TrEMBL
Match: A0A1S3BFR8 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103489141 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.8e-76
Identity = 161/193 (83.42%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 60
           M KTK+ESG+   LGSKF NPIGEG QRGLAIVDLV+RVMA MATL SAIVMGTANQTLP
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 120
           FSTQSSQFKANYKDLPMFMFFV+AN+IVCGYL LSLPLSIF +M V SVTPRLILLIFD 
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120

Query: 121 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 180
           MAM LAT GAS AAS VYLAYRGN+AANWVSFCTQFDSFCRRISGSLIGSF AV A MLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180

Query: 181 LIISIIAILRRSS 194
           +IIS++A++RRSS
Sbjct: 181 IIISVVAMVRRSS 193

[Close]

BLAST of HG10015364 vs. ExPASy TrEMBL
Match: A0A0A0KQP6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G606300 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.4e-76
Identity = 164/193 (84.97%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 60
           M KTK+ESG+   LGSKF NPIGEG QRGLAIVDLV+RVMA MATL SAIVMGTANQTLP
Sbjct: 1   MGKTKTESGETQILGSKFENPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 120
           FSTQ+SQFKANYKDLP  MFFVLANSIVCGYL LSLPLSIF IM V SVTPRLILLIFDM
Sbjct: 61  FSTQTSQFKANYKDLP--MFFVLANSIVCGYLFLSLPLSIFHIMEVASVTPRLILLIFDM 120

Query: 121 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 180
           MAM LAT GAS AAS VYLAYRGN+AANWVSFCTQFDSFCRRISGSLIGSFGAV A MLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFGAVFAFMLL 180

Query: 181 LIISIIAILRRSS 194
           +IISI+A++RRSS
Sbjct: 181 IIISIVAMVRRSS 191

[Close]

BLAST of HG10015364 vs. ExPASy TrEMBL
Match: A0A6J1HW80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467431 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.8e-62
Identity = 141/192 (73.44%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 1   MAKTKSESGDQVPLGSKFSNPIGEGG-QRGLAIVDLVLRVMAAMATLISAIVMGTANQTL 60
           M ++K++S  +VPLGSK   P G GG QRGL IVDLVLRV+A MATL SAIVMGTA+QTL
Sbjct: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLTIVDLVLRVVALMATLCSAIVMGTAHQTL 62

Query: 61  PFSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFD 120
           PFSTQS+QFKA YKDLPMFMFFVL NS+ CGYL LSLPLSIFQ++ V SVTPRL LLIFD
Sbjct: 63  PFSTQSTQFKAVYKDLPMFMFFVLVNSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122

Query: 121 MMAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIML 180
            MAM L T GASVAASVVYLAY+GN   NW SFC+QFDSFCRR S SLIGSFGAVL ++L
Sbjct: 123 TMAMALETAGASVAASVVYLAYQGNTVVNWASFCSQFDSFCRRSSQSLIGSFGAVLVLVL 182

Query: 181 LLIISIIAILRR 192
           L+ +S IA+ RR
Sbjct: 183 LITLSAIAMSRR 194

[Close]

BLAST of HG10015364 vs. ExPASy TrEMBL
Match: A0A6J1DAJ8 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019184 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.0e-61
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 15  GSKFSNPIGEGGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKD 74
           G K  NPIGEG QR L+IVDLVLRVMAAMATL SA+VM TANQTLPFSTQSSQFKA+YKD
Sbjct: 15  GPKRCNPIGEGAQRRLSIVDLVLRVMAAMATLSSAVVMATANQTLPFSTQSSQFKADYKD 74

Query: 75  LPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAA 134
           LP F FFV+ANSIVCGYL L LPLSIFQ++ V +VTPRLILL FD MAM L   GAS AA
Sbjct: 75  LPTFTFFVMANSIVCGYLFLCLPLSIFQMVEVAAVTPRLILLTFDTMAMALVAAGASAAA 134

Query: 135 SVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILRRSS 194
           SVVYLAYRGN AANWVSFCTQF+SFC+ ISGSLIGSFGAV A++LL+ IS  +I RR S
Sbjct: 135 SVVYLAYRGNDAANWVSFCTQFNSFCQHISGSLIGSFGAVFALILLISISATSISRRPS 193

[Close]

BLAST of HG10015364 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 85/190 (44.74%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 2   AKTKSESGDQVPLGSKFSNPIGEGG-QRGLAIVDLVLRVMAAMATLISAIVMGTANQTLP 61
           A++ S    + PL     +  G GG +RGL+I D +LR+ A +A L +A  MGT+++TLP
Sbjct: 12  AESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLP 71

Query: 62  FSTQSSQFKANYKDLPMFMFFVLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDM 121
           F TQ  QF+A+Y DLP F FFV+A +IV GYL LSLP S+  I+  ++V PRL+LL+ D 
Sbjct: 72  FFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDT 131

Query: 122 MAMTLATVGASVAASVVYLAYRGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLL 181
            A+ L T  AS AA++VYLA+ GN   NW+  C QF  FC++ SG+++ +F +V  + +L
Sbjct: 132 AALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAIL 191

Query: 182 LIISIIAILR 191
           ++IS +++ R
Sbjct: 192 VVISGVSLKR 201

[Close]

BLAST of HG10015364 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 145.2 bits (365), Expect = 5.4e-35
Identity = 82/164 (50.00%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 28  RGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVLANSI 87
           R +AI++ +LR++A   T+ SAI+MGT ++TLPF TQ  +F+A Y DLP   FFV+AN++
Sbjct: 23  RRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAV 82

Query: 88  VCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAASVVYLAYRGNIAA 147
           V GYL LSL L+   I+   +   R++L+I D+  + L T GAS AA++VYLA+ GN   
Sbjct: 83  VSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKT 142

Query: 148 NWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILRR 192
           NW + C QF+SFC RISGSLIGSF A++ ++LL+++S IA+ RR
Sbjct: 143 NWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

[Close]

BLAST of HG10015364 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 138.3 bits (347), Expect = 6.6e-33
Identity = 79/169 (46.75%), Postives = 116/169 (68.64%), Query Frame = 0


Query: 23  GEGG-QRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFF 82
           G GG  RGLAI D +LR+ A +A L +A  MGT+++TLPF TQ  QF+A+Y DLP F FF
Sbjct: 35  GSGGYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFF 94

Query: 83  VLANSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAASVVYLAY 142
           V+A ++V GYL LSLP+S+  I+  ++  PRL+LL+ D   + L T  AS AA++ YLA+
Sbjct: 95  VIAMALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAH 154

Query: 143 RGNIAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILR 191
            GN   NW+  C QF  FC++ SG+++ +F +V+   +L++IS +A+ R
Sbjct: 155 SGNQNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVVISGVALKR 203

[Close]

BLAST of HG10015364 vs. TAIR 10
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 137.9 bits (346), Expect = 8.7e-33
Identity = 79/163 (48.47%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 28  RGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVLANSI 87
           +G++++  VLR+ A   T+ SA+ MGT ++++   +Q    K  Y DLP  MFFV+AN+I
Sbjct: 46  KGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAI 105

Query: 88  VCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAASVVYLAYRGNIAA 147
             GYL LSLP+SIF I    + T R+ILL+ D + + L + GAS A + VYLA+ GN  A
Sbjct: 106 SGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTA 165

Query: 148 NWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILR 191
           NW   C QFD FC RISGSLIGSF AV+ +ML++I S I++ R
Sbjct: 166 NWPPICQQFDGFCERISGSLIGSFCAVILLMLIVINSAISLSR 208

[Close]

BLAST of HG10015364 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32
Identity = 81/166 (48.80%), Postives = 111/166 (66.87%), Query Frame = 0


Query: 25  GGQRGLAIVDLVLRVMAAMATLISAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVLA 84
           G +RGLAI D +LR+ A   T+ +A VM TA +TLPF TQ  QF+A Y DLP F +FV+A
Sbjct: 40  GAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIA 99

Query: 85  NSIVCGYLCLSLPLSIFQIMGVVSVTPRLILLIFDMMAMTLATVGASVAASVVYLAYRGN 144
            ++V  YL LSLP SI  I+   +V PRLILLI D + +TL T  A+ AAS+ YLA+ GN
Sbjct: 100 VAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGN 159

Query: 145 IAANWVSFCTQFDSFCRRISGSLIGSFGAVLAIMLLLIISIIAILR 191
            + NW+  C QF  FC+ +S +++    A+L  ++L+IIS IA+ R
Sbjct: 160 QSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALKR 205

The following BLAST results are available for this feature:

BLAST of HG10015364 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891857.1	2.6e-79	87.05	casparian strip membrane protein 1-like [Benincasa hispida]	[more]
XP_031742030.1	2.9e-78	86.01	casparian strip membrane protein 1-like isoform X1 [Cucumis sativus]	[more]
XP_008446384.1	7.8e-76	83.42	PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >KAA0034436.1 caspa...	[more]
XP_022968095.1	3.7e-62	73.44	casparian strip membrane protein 3-like [Cucurbita maxima]	[more]
KAG7013128.1	2.4e-61	72.40	Casparian strip membrane protein 2, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of HG10015364 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI33	1.3e-44	54.05	Casparian strip membrane protein 1 OS=Panicum virgatum OX=38727 PE=2 SV=1	[more]
C5Z7E3	4.8e-44	56.40	Casparian strip membrane protein 3 OS=Sorghum bicolor OX=4558 GN=Sb10g008220 PE=...	[more]
B6T959	1.1e-43	54.05	Casparian strip membrane protein 1 OS=Zea mays OX=4577 PE=2 SV=1	[more]
B9T4E6	1.2e-42	54.35	Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 P...	[more]
P0DI36	2.6e-42	53.11	Casparian strip membrane protein 3 OS=Brachypodium distachyon OX=15368 GN=Bradi1...	[more]

BLAST of HG10015364 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SX44	3.8e-76	83.42	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G0...	[more]
A0A1S3BFR8	3.8e-76	83.42	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103489141 PE=3 SV=1	[more]
A0A0A0KQP6	6.4e-76	84.97	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G606300 PE=3 SV=1	[more]
A0A6J1HW80	1.8e-62	73.44	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467431 PE=3 SV=1	[more]
A0A6J1DAJ8	2.0e-61	77.09	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019184 PE=3 SV=1	[more]

BLAST of HG10015364 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06200.1	1.4e-35	44.74	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	5.4e-35	50.00	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	6.6e-33	46.75	Uncharacterised protein family (UPF0497)	[more]
AT1G14160.1	8.7e-33	48.47	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	1.9e-32	48.80	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 28..175 e-value: 4.3E-40 score: 136.9
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 35..187 e-value: 4.1E-41 score: 138.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR11615:SF318	CASPARIAN STRIP MEMBRANE PROTEIN 4	coord: 21..190
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 21..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015364.1	HG10015364.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding