HG10015357 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10015357
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription termination factor MTEF1, chloroplastic
Location	Chr02: 26046262 .. 26047185 (-)
RNA-Seq Expression	HG10015357
Synteny	HG10015357

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGCAGGCTCCAACTTCCTCTCCCATGCTTCCTCTTCCTCTTTCCTCGGTCTTTAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTTCGCCCTTTCCCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCCTCCTTTTCCGGGAAAAAATACTCTACCTCGAGAACCACCTTAATGTCGATTTCCGAAAAGCCTTCCGGGAGAATCCCCATTCTCGTTCCGCCACTCTCTCCACCCTCAAATCCGTCGAGGTTTGTCTCTCCTCAATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGACATGTACCCCAAACTCCTCACCTCCAATCCGGACTATGATCTTTACCCCATTTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGCTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGACAATGCTACTGGTCTCGAGTGTTGAACATACGCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCTGGGTTGTTGACTTACAGTATTCAAAATAATTTGGTTCCTAAAGTGAATTATTTCTTAGGAGACATGAAGGGTGACTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTCATTTAGTTTGGAGAGAAAGATTAAGCCGCGTCATCGTTCGTTAGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAAGGTTGATAGAAATGCAATTGCAGTCCTTGACGGCTGATCGTTGA

mRNA sequence

ATGATAAGCAGGCTCCAACTTCCTCTCCCATGCTTCCTCTTCCTCTTTCCTCGGTCTTTAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTTCGCCCTTTCCCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCCTCCTTTTCCGGGAAAAAATACTCTACCTCGAGAACCACCTTAATGTCGATTTCCGAAAAGCCTTCCGGGAGAATCCCCATTCTCGTTCCGCCACTCTCTCCACCCTCAAATCCGTCGAGGTTTGTCTCTCCTCAATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGACATGTACCCCAAACTCCTCACCTCCAATCCGGACTATGATCTTTACCCCATTTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGCTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGACAATGCTACTGGTCTCGAGTGTTGAACATACGCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCTGGGTTGTTGACTTACAGTATTCAAAATAATTTGGTTCCTAAAGTGAATTATTTCTTAGGAGACATGAAGGGTGACTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTCATTTAGTTTGGAGAGAAAGATTAAGCCGCGTCATCGTTCGTTAGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAAGGTTGATAGAAATGCAATTGCAGTCCTTGACGGCTGATCGTTGA

Coding sequence (CDS)

ATGATAAGCAGGCTCCAACTTCCTCTCCCATGCTTCCTCTTCCTCTTTCCTCGGTCTTTAGTCCCATCTCTTAAGCCCTTGAGAAACCCTAATTTCAGAAAACCTCGGTTCGCCCTTTCCCTCAATACCCAATTTTCCGACCACTCCGACTCCGGCCTCCTTTTCCGGGAAAAAATACTCTACCTCGAGAACCACCTTAATGTCGATTTCCGAAAAGCCTTCCGGGAGAATCCCCATTCTCGTTCCGCCACTCTCTCCACCCTCAAATCCGTCGAGGTTTGTCTCTCCTCAATGGGACTCGAGCTCTCTGCAGTCGGCCGCGTTCTCGACATGTACCCCAAACTCCTCACCTCCAATCCGGACTATGATCTTTACCCCATTTTCGATTTCCTTCTTAATGAGGTTCAAATTCCGTTTCCCGACATTCGAAAATCCATAATTCGATGCCCTAGAATTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGCTGAAGTTCTTGCGCGACCTAGGTTTCGTTGGGTTGAACGCCATCACGTGCCAGACGACAATGCTACTGGTCTCGAGTGTTGAACATACGCTTTTGCCTAAGATTCAGTACCTTGAGAGCTTGGGCTTATCGCACGAGGATGTGGTTAATATGGTGTTAAGGTCTCCTGGGTTGTTGACTTACAGTATTCAAAATAATTTGGTTCCTAAAGTGAATTATTTCTTAGGAGACATGAAGGGTGACTTGTTGGAATTGAAAAGTTTTCCGCAATATTTTTCATTTAGTTTGGAGAGAAAGATTAAGCCGCGTCATCGTTCGTTAGTTGAACATGGATTGTCACTTCCTTTGTCGAAAATGCTGAAGGTTAGTGACGGGGAGTTCACTGCAAGGTTGATAGAAATGCAATTGCAGTCCTTGACGGCTGATCGTTGA

Protein sequence

MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQSLTADR

Homology

[Close]

BLAST of HG10015357 vs. NCBI nr
Match: XP_038892906.1 (transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_038892907.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida])

HSP 1 Score: 557.4 bits (1435), Expect = 7.8e-155
Identity = 289/307 (94.14%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKIL 60
           MISR QLP PC  FLFPRS   +LKPLRNPNFRKPRFALSLNTQFSDHSD+GLLFREKIL
Sbjct: 1   MISRFQLPPPC--FLFPRSSFQALKPLRNPNFRKPRFALSLNTQFSDHSDAGLLFREKIL 60

Query: 61  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 120
           YLENHLNVDFRKAFRENP SRSATLST+KSVEVCLSSMGLELSAVGRVLDMYPKLLT+NP
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSTVKSVEVCLSSMGLELSAVGRVLDMYPKLLTANP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLG 240
           CQTTMLLVSSVE TLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV KVNYFL 
Sbjct: 181 CQTTMLLVSSVERTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVRKVNYFLE 240

Query: 241 DMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL 300
           DMKGDLLELK FPQYFSFSLERKIKPRHRSLV+HGLSLPLSKMLKVSDGEFTARLIEM+L
Sbjct: 241 DMKGDLLELKIFPQYFSFSLERKIKPRHRSLVQHGLSLPLSKMLKVSDGEFTARLIEMRL 300

Query: 301 QSLTADR 308
           QSLTADR
Sbjct: 301 QSLTADR 305

[Close]

BLAST of HG10015357 vs. NCBI nr
Match: XP_008446371.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] >KAA0034429.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK17705.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 3.2e-148
Identity = 276/308 (89.61%), Postives = 288/308 (93.51%), Query Frame = 0


Query: 1   MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKI 60
           MISRLQLP P CF+F FP SL  SLKPL+NP+F KPRF LSLNTQFSD SDSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSN 120
           LYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMGL+ SAVGRVLDMYPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 180
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ 300
           GDMKGDLLELKSFPQYFSF+LERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF A L EM+
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 LQSLTADR 308
            +SL ADR
Sbjct: 301 CRSLMADR 308

[Close]

BLAST of HG10015357 vs. NCBI nr
Match: XP_022945324.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_022945325.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 528.5 bits (1360), Expect = 3.9e-146
Identity = 270/306 (88.24%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKIL 60
           M+SR+Q   P  LFLFPRS  PSL PLRNPNFRKPRF +SLN+QFSDHSD+GLLFR+KIL
Sbjct: 1   MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 120
           YLENHLNVDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLG 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL 300
           DMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTAD 307
           QS TAD
Sbjct: 301 QSSTAD 306

[Close]

BLAST of HG10015357 vs. NCBI nr
Match: KAG7013135.1 (Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527.7 bits (1358), Expect = 6.6e-146
Identity = 270/306 (88.24%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKIL 60
           MISR+Q   P  LFLFPRS  PSL PLRNPNFRKPRF +SLN+QFSDHSD+GLLFR+KIL
Sbjct: 1   MISRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 120
           YLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLG 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL 300
           DMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTAD 307
           QS TAD
Sbjct: 301 QSSTAD 306

[Close]

BLAST of HG10015357 vs. NCBI nr
Match: XP_022968085.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022968086.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 526.2 bits (1354), Expect = 1.9e-145
Identity = 268/306 (87.58%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKIL 60
           MISR+Q   PC  FLFPRS  PSL P+RNPNFRKPRF +SLN+QFSDHSD+GL FR+KIL
Sbjct: 1   MISRVQNLPPCNRFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQKIL 60

Query: 61  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 120
           YLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLG 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL 300
           DMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTAD 307
           QS TAD
Sbjct: 301 QSSTAD 306

[Close]

BLAST of HG10015357 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 306.2 bits (783), Expect = 4.1e-82
Identity = 161/273 (58.97%), Postives = 208/273 (76.19%), Query Frame = 0


Query: 32  FRKPRF-ALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKS 91
           F  P F A+ +     + SD+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ S
Sbjct: 9   FPPPCFSAVRIRCFAGETSDTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVS 68

Query: 92  VEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCP 151
           VE  LSS GL   AVGR+LDM+P LLTS+P+ ++ P+  FL NE+ I   DI KSI RCP
Sbjct: 69  VETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCP 128

Query: 152 RILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSH 211
           R+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + 
Sbjct: 129 RLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTR 188

Query: 212 EDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHR 271
           E+V  MV+RSP LLTYS+ NNLVPKV +F+ +M+GD+ ELK FPQYFSFSLERKIKPRHR
Sbjct: 189 EEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHR 248

Query: 272 SLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQS 303
            L EHG+ +PLS+MLKVSDG+F   L+E++L+S
Sbjct: 249 LLKEHGILMPLSEMLKVSDGQFNHWLLELRLRS 280

[Close]

BLAST of HG10015357 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.5e-19
Identity = 60/209 (28.71%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 69  DFRKAFRENPHSRSATL-STLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPI 128
           D ++     P     T+ + LK+    L  +G+  S +G+++   P L + + +  L P 
Sbjct: 235 DIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPT 294

Query: 129 FDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFL-RDLGFVGLNAITC--QTT 188
             +L+ EV I   D+ K +   P+ILV  LD+       FL ++LG    + +    +  
Sbjct: 295 IRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHP 354

Query: 189 MLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKG 248
            LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++  
Sbjct: 355 QLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNN 414

Query: 249 DLLELKSFPQYFSFSLERKIKPRHRSLVE 274
           ++  L  +P Y S SL+++I+PRHR LVE
Sbjct: 415 EVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]

BLAST of HG10015357 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-16
Identity = 63/201 (31.34%), Postives = 102/201 (50.75%), Query Frame = 0


Query: 98  MGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDL 157
           +G+    + R+L + P L   + +  + P   F L E+ IP   I   +++ P +L + L
Sbjct: 398 LGIPKEGMKRILVVKPILYCIDLEKTIAPKVRF-LQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 158 DLQLRPALKFLRDLGFV---GLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVN 217
             ++RP + FL     V    +  +      LL  S+   L P ++Y  SLG+    +  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 218 MVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEH 277
           M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS+SLER+I PRH  +VE+
Sbjct: 518 MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVEN 577

Query: 278 GLSLPLSKMLKVSDGEFTARL 296
            ++  L  ML  +D EF  R+
Sbjct: 578 RVNFKLRYMLACTDEEFERRV 596

[Close]

BLAST of HG10015357 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-16
Identity = 60/220 (27.27%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 88  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSII 147
           LK     L ++G++ +   +++  +P +LT +    L    +F L++  +    I + + 
Sbjct: 268 LKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEF-LSQTGLTEEQIGRILT 327

Query: 148 RCPRILVSDLDLQLRPALKFLRDLGF-VGLNAITCQTTMLLVSSVEHTLLPKIQYLESLG 207
           RCP I+   ++ +LRP +++ R L   V +    C  T  L  S+E  L P  ++    G
Sbjct: 328 RCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGL--SIESNLKPVTEFFLEKG 387

Query: 208 LSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKP 267
              +++  M+ R   L T+S++ N++PK +YF   M     EL  FPQ+F +SL+ +IKP
Sbjct: 388 FGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKP 447

Query: 268 RHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQSLTAD 307
           R+  +   G+ L L+++L +S  EF  ++++ ++  L ++
Sbjct: 448 RYELVQRSGVRLLLNQVLSLSGIEF-EKVVKKKMMKLVSN 481

[Close]

BLAST of HG10015357 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.5e-11
Identity = 59/220 (26.82%), Postives = 98/220 (44.55%), Query Frame = 0


Query: 88  LKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYP----IFDFLLNEVQIPFPDIR 147
           +K +   L  +G+   A  R+++  P +L    D  + P    + DF + E  +P     
Sbjct: 287 IKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLP----- 346

Query: 148 KSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVGLNAITCQTTMLLVSSVEHTL 207
             I + P I+  DL  +L    K L         DLG +       +     VS  E  +
Sbjct: 347 SIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSL------IERMPQFVSLSESPM 406

Query: 208 LPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQY 267
           L  I +L   G S +    MV+  P +L  ++   +     YF  +MK  L +L  FP +
Sbjct: 407 LKHIDFLTKCGFSIDQTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAF 466

Query: 268 FSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARL 296
           F++ LE  +KPRH+ +++ G+   L+ ML  SD +F  R+
Sbjct: 467 FTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQRM 494

[Close]

BLAST of HG10015357 vs. ExPASy TrEMBL
Match: A0A5D3D1U5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00330 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148
Identity = 276/308 (89.61%), Postives = 288/308 (93.51%), Query Frame = 0


Query: 1   MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKI 60
           MISRLQLP P CF+F FP SL  SLKPL+NP+F KPRF LSLNTQFSD SDSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSN 120
           LYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMGL+ SAVGRVLDMYPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 180
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ 300
           GDMKGDLLELKSFPQYFSF+LERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF A L EM+
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 LQSLTADR 308
            +SL ADR
Sbjct: 301 CRSLMADR 308

[Close]

BLAST of HG10015357 vs. ExPASy TrEMBL
Match: A0A1S3BFK9 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489133 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148
Identity = 276/308 (89.61%), Postives = 288/308 (93.51%), Query Frame = 0


Query: 1   MISRLQLPLP-CFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKI 60
           MISRLQLP P CF+F FP SL  SLKPL+NP+F KPRF LSLNTQFSD SDSGLLFREKI
Sbjct: 1   MISRLQLPPPSCFIFFFPPSLAGSLKPLKNPSFGKPRFTLSLNTQFSDRSDSGLLFREKI 60

Query: 61  LYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSN 120
           LYLENHLNVD RKAFRENPH RSA+LSTLKSVEVCLSSMGL+ SAVGRVLDMYPKLLTSN
Sbjct: 61  LYLENHLNVDSRKAFRENPHCRSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSN 120

Query: 121 PDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAI 180
           PDYD+YPIFDFLLNEVQIPFPDI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AI
Sbjct: 121 PDYDIYPIFDFLLNEVQIPFPDIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAI 180

Query: 181 TCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240
           TCQTT+LLVS+VEHTLLPKIQ+LESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL
Sbjct: 181 TCQTTLLLVSNVEHTLLPKIQFLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFL 240

Query: 241 GDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQ 300
           GDMKGDLLELKSFPQYFSF+LERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF A L EM+
Sbjct: 241 GDMKGDLLELKSFPQYFSFNLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMR 300

Query: 301 LQSLTADR 308
            +SL ADR
Sbjct: 301 CRSLMADR 308

[Close]

BLAST of HG10015357 vs. ExPASy TrEMBL
Match: A0A6J1G0M2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449597 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146
Identity = 270/306 (88.24%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKIL 60
           M+SR+Q   P  LFLFPRS  PSL PLRNPNFRKPRF +SLN+QFSDHSD+GLLFR+KIL
Sbjct: 1   MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKIL 60

Query: 61  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 120
           YLENHLNVDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLG 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL 300
           DMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTAD 307
           QS TAD
Sbjct: 301 QSSTAD 306

[Close]

BLAST of HG10015357 vs. ExPASy TrEMBL
Match: A0A6J1HTW2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467425 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 9.4e-146
Identity = 268/306 (87.58%), Postives = 287/306 (93.79%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDHSDSGLLFREKIL 60
           MISR+Q   PC  FLFPRS  PSL P+RNPNFRKPRF +SLN+QFSDHSD+GL FR+KIL
Sbjct: 1   MISRVQNLPPCNRFLFPRSSTPSLNPMRNPNFRKPRFTISLNSQFSDHSDAGLHFRQKIL 60

Query: 61  YLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNP 120
           YLENHL+VDFRKAFRENP SRSATLS +KSVEVCLSSMGLELSAVGRVLDMYP+LLTS+P
Sbjct: 61  YLENHLHVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDP 120

Query: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAIT 180
           DYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT
Sbjct: 121 DYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAIT 180

Query: 181 CQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLG 240
            QTT+LLVSSVEHTLLPKIQYLE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLG
Sbjct: 181 SQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLG 240

Query: 241 DMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTARLIEMQL 300
           DMKGDL EL+ FPQYFSFSLERKIKPRHR LVEHGLSL LSKMLKVSDGEFTARL+EM+L
Sbjct: 241 DMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL 300

Query: 301 QSLTAD 307
           QS TAD
Sbjct: 301 QSSTAD 306

[Close]

BLAST of HG10015357 vs. ExPASy TrEMBL
Match: A0A6J1DAK3 (transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019187 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.3e-143
Identity = 266/312 (85.26%), Postives = 285/312 (91.35%), Query Frame = 0


Query: 1   MISRLQLPLPCFLFLFPRSLVPSLKPLRNPNFRKPRFALSLNTQFSDH------SDSGLL 60
           MISRLQ P PC L LFPRS  PSLKP  NPNFR PRF +++NTQFS H      SDSG+L
Sbjct: 1   MISRLQFPPPCILLLFPRSSPPSLKPSGNPNFRSPRFTVTINTQFSGHSGTATSSDSGIL 60

Query: 61  FREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMYPK 120
           FREKILYLENHL+VD RKAF++NP SRSATLS LKSVEVCLSSMGLELSAVGRVLDMYP+
Sbjct: 61  FREKILYLENHLHVDSRKAFQQNPDSRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQ 120

Query: 121 LLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFV 180
           LLTS+P+YDLYPIFDFLLNEV+IPFPDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFV
Sbjct: 121 LLTSDPEYDLYPIFDFLLNEVRIPFPDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFV 180

Query: 181 GLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPK 240
           GLNAITCQTTMLLVSS+EHTLLPKI+YLESLG SH+DVVNMVLRSPGLLTYSIQNNLVPK
Sbjct: 181 GLNAITCQTTMLLVSSIEHTLLPKIKYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPK 240

Query: 241 VNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFTAR 300
           V+YFLGDMKGDLLELK FPQYFSFSLERKIKPRHR LVEHGLSL LS+MLKVSDGEFTAR
Sbjct: 241 VDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTAR 300

Query: 301 LIEMQLQSLTAD 307
           +IEM+LQS TAD
Sbjct: 301 VIEMRLQSATAD 312

[Close]

BLAST of HG10015357 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.9e-83
Identity = 161/273 (58.97%), Postives = 208/273 (76.19%), Query Frame = 0


Query: 32  FRKPRF-ALSLNTQFSDHSDSGLLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKS 91
           F  P F A+ +     + SD+G+LFREK++YL++ LNVD  KA R NP  RSA +S++ S
Sbjct: 8   FPPPCFSAVRIRCFAGETSDTGILFREKLIYLQD-LNVDPHKALRVNPSLRSAPISSVVS 67

Query: 92  VEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCP 151
           VE  LSS GL   AVGR+LDM+P LLTS+P+ ++ P+  FL NE+ I   DI KSI RCP
Sbjct: 68  VETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCP 127

Query: 152 RILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYL-ESLGLSH 211
           R+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI+YL E LG + 
Sbjct: 128 RLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTR 187

Query: 212 EDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHR 271
           E+V  MV+RSP LLTYS+ NNLVPKV +F+ +M+GD+ ELK FPQYFSFSLERKIKPRHR
Sbjct: 188 EEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHR 247

Query: 272 SLVEHGLSLPLSKMLKVSDGEFTARLIEMQLQS 303
            L EHG+ +PLS+MLKVSDG+F   L+E++L+S
Sbjct: 248 LLKEHGILMPLSEMLKVSDGQFNHWLLELRLRS 279

[Close]

BLAST of HG10015357 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-57
Identity = 117/239 (48.95%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 53  LLFREKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSSMGLELSAVGRVLDMY 112
           L  +EKIL LE  + +D  KA   NP   SA L +++SV   L S G+  + + R+L M 
Sbjct: 53  LQMKEKILCLE-LMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMC 112

Query: 113 PKLLTSNPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLG 172
           PK+LTS+   +LYP+F FL N++ +P    R+ I +CPR+L+S ++ QL+PAL +L+ LG
Sbjct: 113 PKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLG 172

Query: 173 FVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLV 232
              L A+  Q  +LLVSSVEHTL+PK+++LES+G S  + + M+LR P L T+SI+NN  
Sbjct: 173 LKDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFK 232

Query: 233 PKVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF 292
           PK++YF+ ++KG L  LK FPQYF+FSLE++IKPRH   +E GL LPLS MLK +D EF
Sbjct: 233 PKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEF 290

[Close]

BLAST of HG10015357 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-35
Identity = 91/238 (38.24%), Postives = 133/238 (55.88%), Query Frame = 0


Query: 57  EKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPK 116
           EK++YL++ L +DF      +P   S  LS ++SV   +++  +   L    R++ M P+
Sbjct: 75  EKLIYLDS-LGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPE 134

Query: 117 LLTSNPDYDLYPIFDFLLNEVQI-PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGF 176
           LLTS       P+  FLL EV +    D+R+++ R PR+L   +D QLRP L FL+ +G 
Sbjct: 135 LLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGI 194

Query: 177 VGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVP 236
           +  +    + T LL  SV++ L+P+I Y E LG S      M  R P L  YSI  N  P
Sbjct: 195 LDPH----KHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEP 254

Query: 237 KVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF 292
           K+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH +    G+  PL  MLK ++  F
Sbjct: 255 KLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]

BLAST of HG10015357 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-35
Identity = 91/238 (38.24%), Postives = 133/238 (55.88%), Query Frame = 0


Query: 57  EKILYLENHLNVDFRKAFRENPHSRSATLSTLKSVEVCLSS--MGLELSAVGRVLDMYPK 116
           EK++YL++ L +DF      +P   S  LS ++SV   +++  +   L    R++ M P+
Sbjct: 75  EKLIYLDS-LGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPE 134

Query: 117 LLTSNPDYDLYPIFDFLLNEVQI-PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGF 176
           LLTS       P+  FLL EV +    D+R+++ R PR+L   +D QLRP L FL+ +G 
Sbjct: 135 LLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGI 194

Query: 177 VGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVP 236
           +  +    + T LL  SV++ L+P+I Y E LG S      M  R P L  YSI  N  P
Sbjct: 195 LDPH----KHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEP 254

Query: 237 KVNYFLGDMKGDLLELKSFPQYFSFSLERKIKPRHRSLVEHGLSLPLSKMLKVSDGEF 292
           K+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH +    G+  PL  MLK ++  F
Sbjct: 255 KLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]

BLAST of HG10015357 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30
Identity = 77/211 (36.49%), Postives = 122/211 (57.82%), Query Frame = 0


Query: 85  LSTLKSVEVCLSSMGLELSAVGRVLDMYPKLLTSNPDYD-LYPIFDFLLNEVQIPFPDIR 144
           LS + S    L S G+      R++ + P+L +   D   L P+FDFL  E+     + R
Sbjct: 62  LSVILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESR 121

Query: 145 KSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQYLE 204
             I+ CP IL SD++  LRP L +L++LG   LN  +     +L + VE  L  K+++L+
Sbjct: 122 GLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVE-KLRAKMRFLK 181

Query: 205 SLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFSLERK 264
           S+G  HE+   +  R P +  YS+++NL PK  + + DM+ +L ELK FPQYF+FSL ++
Sbjct: 182 SIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKR 241

Query: 265 IKPRHRSLVEHGLSLPLSKMLKVSDGEFTAR 295
           I+PRH  L +  + + LS+ML   D +F ++
Sbjct: 242 IRPRHWHLKKKNVRVSLSRMLMWGDQKFYSK 271

The following BLAST results are available for this feature:

BLAST of HG10015357 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892906.1	7.8e-155	94.14	transcription termination factor MTEF1, chloroplastic [Benincasa hispida] >XP_03...	[more]
XP_008446371.1	3.2e-148	89.61	PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] ...	[more]
XP_022945324.1	3.9e-146	88.24	transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_0...	[more]
KAG7013135.1	6.6e-146	88.24	Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma su...	[more]
XP_022968085.1	1.9e-145	87.58	transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022...	[more]

BLAST of HG10015357 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	4.1e-82	58.97	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	6.5e-19	28.71	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	3.9e-16	31.34	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	3.9e-16	27.27	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	6.5e-11	26.82	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of HG10015357 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1U5	1.5e-148	89.61	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFK9	1.5e-148	89.61	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1G0M2	1.9e-146	88.24	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A6J1HTW2	9.4e-146	87.58	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A6J1DAK3	4.3e-143	85.26	transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=...	[more]

BLAST of HG10015357 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03050.1	2.9e-83	58.97	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	1.6e-57	48.95	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.1	1.0e-35	38.24	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	1.0e-35	38.24	Mitochondrial transcription termination factor family protein	[more]
AT3G18870.1	1.3e-30	36.49	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 143..174 e-value: 9.6E-4 score: 28.4 coord: 106..138 e-value: 25.0 score: 13.8 coord: 177..208 e-value: 0.54 score: 19.3 coord: 246..277 e-value: 5.4E-4 score: 29.3 coord: 213..245 e-value: 0.021 score: 24.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 141..291 e-value: 5.0E-30 score: 104.5 coord: 92..173 e-value: 1.9E-5 score: 23.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 37..303
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 69..304 e-value: 1.7E-46 score: 160.5
None	No IPR available	PANTHER	PTHR13068:SF36	TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC	coord: 37..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10015357.1	HG10015357.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity